BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148347.6 + phase: 0
(807 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC204789 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance... 628 0.0
TC228380 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance... 280 e-118
TC204792 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance... 370 e-102
TC210037 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance... 368 e-102
TC218448 weakly similar to UP|DR29_ARATH (Q9SZA7) Probable disea... 360 1e-99
TC221528 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance... 314 1e-85
TC233005 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance... 298 8e-81
TC208943 weakly similar to UP|DR30_ARATH (Q9LZ25) Probable disea... 246 2e-65
TC235133 similar to UP|Q6YIA0 (Q6YIA0) Disease resistance protei... 213 2e-55
BM085135 weakly similar to GP|27808630|gb| At5g66630 {Arabidopsi... 183 3e-46
TC228381 similar to UP|Q6YIA0 (Q6YIA0) Disease resistance protei... 163 1e-42
TC210296 weakly similar to UP|DR29_ARATH (Q9SZA7) Probable disea... 161 1e-39
TC204790 weakly similar to UP|Q9LG50 (Q9LG50) ESTs AU078742(C118... 153 3e-37
BG359519 weakly similar to GP|21655203|gb| NBS/LRR {Pinus taeda}... 151 1e-36
TC204793 141 1e-33
AI736591 140 2e-33
TC223248 similar to UP|Q6YIA0 (Q6YIA0) Disease resistance protei... 140 2e-33
BF068857 139 4e-33
AI941453 weakly similar to GP|9758140|dbj| disease resistance pr... 115 8e-26
TC218702 108 7e-24
>TC204789 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance protein-like
protein MsR1, partial (76%)
Length = 2649
Score = 628 bits (1620), Expect(3) = 0.0
Identities = 311/480 (64%), Positives = 381/480 (78%), Gaps = 1/480 (0%)
Frame = +2
Query: 328 VVRSCKGLPLTIKVIATSLRNRPDDLWRKIVMELSQGHSILDSNTELLTRLQKIFDVLED 387
VVR CKGLPL +KVI SL +RP ++W+K+V ELSQGHSILDSN ELLT QK+ VLED
Sbjct: 818 VVRYCKGLPLAVKVIGRSLSHRPIEMWQKMVEELSQGHSILDSNIELLTCFQKLLHVLED 997
Query: 388 NPTIMECFMDIALFPEDHRIPVAALVDMWAKLYKLDDNGIQAMEIINKLGIMNLANVIIP 447
NP ECFMD+ LFPED RIP+ L+D+WA LY DD+GI+A +IINKL MNL NV++
Sbjct: 998 NPNNKECFMDLGLFPEDQRIPLPVLIDIWAVLYGYDDDGIEATDIINKLHSMNLVNVLVA 1177
Query: 448 RKNASDTDNNNYNNHFIILHDILRDLGIYQSTKQPFEQRKRLIIDINKNRSELAEKQQSL 507
RKN+SD+DN YNNH++ILHD+LR+L IYQ+ +P E+RKRLI DIN++ EKQQ +
Sbjct: 1178 RKNSSDSDNYYYNNHYVILHDLLRELAIYQNNLEPIEKRKRLINDINESE----EKQQGM 1345
Query: 508 LTRILSKVMRLCIKQNPQQLAAHILSVSTDEACASDWSQMQPTQVEVLILNLHTKQYSFP 567
+ R+LSK R +KQ QQ+ A LS+S DE S S +QP+ EVL+LNL TK+YSFP
Sbjct: 1346 IARLLSKFCRCSVKQTLQQVPARTLSISADETNTSYQSHIQPSLAEVLVLNLQTKKYSFP 1525
Query: 568 ESIKKMSKLKVLIITNYSFHPCELNNFELLGSLQNLEKIRLERILVPSFGTLKNLKKLSL 627
E I+KMS+LKVLI+TNY FHPCEL+NF+LL S+ NL +IRLERI VP G LKNL KLSL
Sbjct: 1526 EYIEKMSELKVLIMTNYGFHPCELDNFKLLSSVSNLRRIRLERISVPHLGALKNLGKLSL 1705
Query: 628 YMCNTIL-AFEKGSILISDAFPNLEELNIDYCKDLVVLQTGICDIISLKKLNVTNCHKLS 686
YMC+ I AFE G+I + D+FP L +LNIDYCKD+V L TGICDI+SLKKL++TNCHKLS
Sbjct: 1706 YMCSNISQAFENGTITVLDSFPKLSDLNIDYCKDMVKLPTGICDIVSLKKLSITNCHKLS 1885
Query: 687 SLPQDIGKLENLELLSFSSCTDLEAIPTSIGKLLNLKHLDISNCISLSSLPEEFGNLCNL 746
SLPQ+IG+L NLELL+ SSCTDLE IP SI KL L+ LD+SNCISLSSLPE+ G+LCNL
Sbjct: 1886 SLPQEIGQLLNLELLNISSCTDLEEIPDSIVKLSKLRLLDLSNCISLSSLPEDIGDLCNL 2065
Query: 747 KNLDMASCASIELPFSVVNLQNLKTITCDEETAATWEDFQHMLPNMKIEVLHVDVNLNWL 806
+NL+M SCA ELP+SV NL+NLK + CDEETAA+WE F+ MLPN+K+EV V+VNLNWL
Sbjct: 2066 RNLNMTSCARCELPYSVTNLENLKVVVCDEETAASWEAFEAMLPNLKLEVPRVEVNLNWL 2245
Score = 197 bits (502), Expect(3) = 0.0
Identities = 91/136 (66%), Positives = 118/136 (85%)
Frame = +1
Query: 194 KFKENIIFVTFSKTPMLKTIVERIIEHCGYPVPEFQSDEDAVNKLELLLKKVEGSPLLLV 253
KF ENI+F TFS+TP LK I+ER+ EHCGY VPEF SDEDA+ +LE+LL+K+EGSPLLLV
Sbjct: 301 KFNENILFFTFSQTPKLKNIIERLFEHCGYHVPEFISDEDAIKRLEILLRKIEGSPLLLV 480
Query: 254 LDDVWPTSESLVKKLQFEISDFKILVTSRVSFPRFRTTCILKPLAHEDAVTLFHHYAQME 313
LDDVWP SE+L++K QF++SD+KI+VTSRV+FP++ T +LKPLAHEDA+TLF H+A +E
Sbjct: 481 LDDVWPGSEALIEKFQFQMSDYKIVVTSRVAFPKYGTPYVLKPLAHEDAMTLFRHHALLE 660
Query: 314 KNSSDIIDKNLVEKVV 329
K+SS I DK +V+KV+
Sbjct: 661 KSSSHIPDKEIVQKVL 708
Score = 125 bits (314), Expect(3) = 0.0
Identities = 60/92 (65%), Positives = 71/92 (76%)
Frame = +3
Query: 100 VNDVEETLYKAREILELLNYETFEHKFNEAKPPFKRPFDVPENPKFTVGLDIPFSKLKME 159
V ++ TLYK +E+LE L+ E F+ K P K PF VPENP+FTV LD+P SKLKME
Sbjct: 18 VKYIKNTLYKVKEVLERLDIENFQLKLKGVGSPIKCPFGVPENPEFTVALDLPLSKLKME 197
Query: 160 LIRDGSSTLVLTGLGGLGKTTLATKLCWDQEV 191
+IRDG STL+LTGLGG GKTTLATKLCWD+EV
Sbjct: 198 VIRDGMSTLLLTGLGGSGKTTLATKLCWDEEV 293
Score = 36.2 bits (82), Expect = 0.059
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 781 TWEDFQHMLPNMKIEVLHVDVNLNW 805
+WE F+ M+PN+K EV VDVN +W
Sbjct: 2277 SWEAFETMIPNLKFEVPRVDVN*SW 2351
>TC228380 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance
protein-like protein MsR1, partial (32%)
Length = 1430
Score = 280 bits (717), Expect(3) = e-118
Identities = 138/205 (67%), Positives = 165/205 (80%), Gaps = 1/205 (0%)
Frame = +3
Query: 602 NLEKIRLERILVPSFGTLKNLKKLSLYMCNTILAFEKGSILISDAFPNLEELNIDYCKDL 661
NL++IRLE I VPSF +KNLKKLSLY CN AFE +LI +AFPNLEELNID+CKD+
Sbjct: 540 NLKRIRLEWIFVPSFVAMKNLKKLSLYTCNMKQAFENNHMLIPNAFPNLEELNIDHCKDM 719
Query: 662 VVLQTGICDIISLKKLNVTNCHKLSSLPQDIGKLENLELLSFSSCTDLEAIPTSIGKLLN 721
V L G+CDI SLKKL++TNCHKLS+LPQ+IG L NLELLS S CTDLE IP SIG+L N
Sbjct: 720 VALPKGLCDITSLKKLSITNCHKLSALPQEIGNLMNLELLSLSCCTDLEGIPASIGRLSN 899
Query: 722 LKHLDISNCISLSSLPEEFGNLCNLKNLDMASCASIELPFSVVNLQNLKTITCDEETAAT 781
L+ +DISNCISL SLPE+FGNL +L+NL M SCA ELPFSV NL+NLK + CD+E AA+
Sbjct: 900 LRLMDISNCISLPSLPEDFGNLSSLQNLYMRSCARCELPFSVANLENLKVVVCDKEIAAS 1079
Query: 782 WEDFQHMLPNMKIEVLH-VDVNLNW 805
W+DF+ MLPN+KI+ + VNLNW
Sbjct: 1080WDDFKPMLPNLKIDTCSLIIVNLNW 1154
Score = 136 bits (343), Expect(3) = e-118
Identities = 73/131 (55%), Positives = 95/131 (71%), Gaps = 3/131 (2%)
Frame = +1
Query: 472 DLGIYQSTKQPFEQRKRLIIDINKNRSE--LAEKQQSLLTRILSKVMRLCIKQNPQQLAA 529
+L I+QST++P E+RKRLII+IN+N+ E L EK SK++ +KQ PQ
Sbjct: 169 ELAIHQSTQEPIERRKRLIIEINQNKPECWLGEK---------SKLLGWRVKQKPQHATD 321
Query: 530 HILSVSTDEACASDWS-QMQPTQVEVLILNLHTKQYSFPESIKKMSKLKVLIITNYSFHP 588
H LS+STDE C SDW MQ QVEVLI NL T++YSFP+ I++M+KLKVLI+T+YSFHP
Sbjct: 322 HTLSISTDENCTSDWPLMMQLAQVEVLIFNL*TRKYSFPDFIEEMNKLKVLIVTSYSFHP 501
Query: 589 CELNNFELLGS 599
E++NFEL GS
Sbjct: 502 SEMSNFELFGS 534
Score = 50.1 bits (118), Expect(3) = e-118
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 411 ALVDMWAKLYKLDDNGIQAMEIINKLGIMNLANVIIPRK 449
+L+DM A LY LDD+GI+AM IINKL MNLANV + R+
Sbjct: 8 SLIDMRA*LYGLDDDGIEAMSIINKLDSMNLANVSVERQ 124
Score = 30.4 bits (67), Expect = 3.2
Identities = 28/94 (29%), Positives = 43/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 677 LNVTNCHKLSSLPQDIGKLENLELLSFSSCTDLEAIPTSIGKLLNLKHLDISNCISLSSL 736
L+ T K S L + G +LL C L+ +P S GKL L ++S SL
Sbjct: 1063 LSHTTTFKFSRLATENGNSHLAQLLM*RFCR-LDRLPKSSGKLGRLMQFEMSISRRFESL 887
Query: 737 PEEFG-NLCNLKNLDMASCASIELPFSVVNLQNL 769
P E G +++ L + S I+ P S + ++L
Sbjct: 886 PIEAGIPSKSVQQLRLRSSKFIKFPISCGSAESL 785
>TC204792 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance
protein-like protein MsR1, partial (29%)
Length = 878
Score = 370 bits (950), Expect = e-102
Identities = 186/295 (63%), Positives = 231/295 (78%), Gaps = 1/295 (0%)
Frame = +3
Query: 419 LYKLDDNGIQAMEIINKLGIMNLANVIIPRKNASDTDNNNYNNHFIILHDILRDLGIYQS 478
LY DD+GI+A ++INKL MNL NV++ RKN+SD+DN YNNHF+ILHD+LR+L IYQ+
Sbjct: 6 LYGYDDDGIEATDMINKLDSMNLVNVLVARKNSSDSDNYYYNNHFVILHDLLRELAIYQN 185
Query: 479 TKQPFEQRKRLIIDINKNRSELAEKQQSLLTRILSKVMRLCIKQNPQQLAAHILSVSTDE 538
++P E+RKRLI DIN E KQQ ++ R+LSK +R +KQ QQ+ A LS+S DE
Sbjct: 186 NREPIEKRKRLINDIN----ETGVKQQGMIARLLSKFLRCSVKQTLQQVPARTLSISADE 353
Query: 539 ACASDWSQMQPTQVEVLILNLHTKQYSFPESIKKMSKLKVLIITNYSFHPCELNNFELLG 598
SD S +QP+Q EVL+LNL TK+YSFPE ++KMS+LKVLI+TNY FHPCEL N +L
Sbjct: 354 TNTSDQSHIQPSQAEVLVLNLQTKKYSFPEYMEKMSELKVLIMTNYGFHPCELENCKLPS 533
Query: 599 SLQNLEKIRLERILVPSFGTLKNLKKLSLYMCNTI-LAFEKGSILISDAFPNLEELNIDY 657
S+ NL++IRLERI VP G LKNL+KLSLYMC+ I FE G+I +SD+FP L +LNIDY
Sbjct: 534 SVSNLKRIRLERISVPHVGALKNLEKLSLYMCSNISQIFENGTIPVSDSFPKLSDLNIDY 713
Query: 658 CKDLVVLQTGICDIISLKKLNVTNCHKLSSLPQDIGKLENLELLSFSSCTDLEAI 712
CKD+V L TGICDI LKKL++TNCHKLSSLPQ+IGKL NLELL+ SSCTDLE I
Sbjct: 714 CKDMVELPTGICDITPLKKLSITNCHKLSSLPQNIGKLLNLELLNLSSCTDLEEI 878
>TC210037 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance
protein-like protein MsR1, partial (29%)
Length = 1357
Score = 368 bits (944), Expect = e-102
Identities = 201/372 (54%), Positives = 251/372 (67%), Gaps = 6/372 (1%)
Frame = +2
Query: 441 LANVIIPRKNASDTDNNNYNNHFIILHDILRDLGIYQSTKQPFEQRKRLIIDINKNRSE- 499
L N I+ RK A D D YNNHF+ILHD+LR+L I QST++PFEQ RLIIDI N
Sbjct: 2 LINFIVTRKVAKDEDKY-YNNHFVILHDLLRELAIRQSTEKPFEQ-DRLIIDITGNDFPE 175
Query: 500 --LAEKQQSLLTRILSKVMRLCIKQNPQQLAAHILSVSTDEACASDWSQMQPTQVEVLIL 557
+ E QQ + ++ R+ I+Q ++AA IL +STDE SDW M+P EVLIL
Sbjct: 176 WWVGENQQGTIGQMFPCFSRM-IRQKQLKVAARILCISTDETFNSDWRDMKPYNTEVLIL 352
Query: 558 NLHTKQYSFPESIKKMSKLKVLIITNYSFHPCELNNFELLGSLQNLEKIRLERILVPSFG 617
NLH+ QYS P KKM KLKVLI+TNY FH E+ FELLGSL NL++IRLE++ VPS
Sbjct: 353 NLHSSQYSLPCFTKKMKKLKVLIVTNYGFHRSEIKKFELLGSLSNLKRIRLEKVSVPSLC 532
Query: 618 TLKNLKKLSLYMCNTILAFEKGSILISDAFPNLEELNIDYCKDLVVLQTGICDIISLKKL 677
LKNL+KLSL MCNT AFE SI IS+A P LEE++IDYC DL+ L G+C+I LKKL
Sbjct: 533 ELKNLQKLSLRMCNTRQAFENCSIQISNAMPYLEEMSIDYCNDLITLPDGLCEISPLKKL 712
Query: 678 NVTNCHKLSSLPQDIGKLENLELLSFSSCTDLEAIPTSIGKLLNLKHLDISNCISLSSLP 737
++TNCHKLS+LPQ IGKLENLE+L SC+DL +P S L L LDIS+C+SL+ LP
Sbjct: 713 SITNCHKLSALPQGIGKLENLEVLRLCSCSDLLEMPNSFEGLNKLSCLDISDCVSLTKLP 892
Query: 738 EEFGNLCNLKNLDMASCASIELPFSVVNLQNLK---TITCDEETAATWEDFQHMLPNMKI 794
++ G L LK L M ELP+SV + K + CDEET WE+F+ PN+KI
Sbjct: 893 DDIGELKKLKKLYMKGSKLGELPYSVHKFEQFKHEINVICDEETVTLWENFR-AFPNLKI 1069
Query: 795 EVLHVDVNLNWL 806
E+ D++LNWL
Sbjct: 1070EIFREDIDLNWL 1105
>TC218448 weakly similar to UP|DR29_ARATH (Q9SZA7) Probable disease
resistance protein At4g33300, partial (47%)
Length = 2012
Score = 360 bits (924), Expect = 1e-99
Identities = 231/657 (35%), Positives = 356/657 (54%), Gaps = 16/657 (2%)
Frame = +1
Query: 166 STLVLTGLGGLGKTTLATKLCWDQEVNGKFKENIIFVTFSKTPMLKTIVERIIEHC---- 221
S + + G+GG GKTTLA ++C D +V FKE I+F+T S++P L+ + RI H
Sbjct: 10 SVVGIWGIGGSGKTTLAREVCRDDQVRCYFKERILFLTVSQSPNLEQLRARIWGHVMGNQ 189
Query: 222 ----GYPVPEFQSDEDAVNKLELLLKKVEGSPLLLVLDDVWPTSESLVKKLQFEISDFKI 277
Y VP++ + KVE + +L+VLDDVW S ++++L ++I K
Sbjct: 190 GLNGTYAVPQWMPQFEC---------KVE-TQVLVVLDDVW--SLPVLEQLVWKIPGCKF 333
Query: 278 LVTSRVSFPR-FRTTCILKPLAHEDAVTLFHHYAQMEKNSSDIIDKNLVEKVVRSCKGLP 336
LV SR +FP F T ++ L DA++LF H+A +K+ + +LV++VV C LP
Sbjct: 334 LVVSRFNFPTIFNATYRVELLGEHDALSLFCHHAFGQKSIPMGANVSLVKQVVAECGRLP 513
Query: 337 LTIKVIATSLRNRPDDLWRKIVMELSQGHSILDS-NTELLTRLQKIFDVLEDNPTIMECF 395
L +KVI SLR++ + W + LSQG SI ++ T L+ R+ + L + I ECF
Sbjct: 514 LALKVIGASLRDQNEMFWLSVKSRLSQGQSIGETYETNLIDRMAISTNYLPEK--IKECF 687
Query: 396 MDIALFPEDHRIPVAALVDMWAKLYKLDDNGIQAMEIINKLGIMNLANVIIPRKNASDTD 455
+D+ FPED +IP+ L++MW ++Y +D+ +A I+ +L NL ++ +
Sbjct: 688 LDLCSFPEDRKIPLEVLINMWVEIYDIDE--AEAYAIVVELSNKNLLTLVQEARVGG--- 852
Query: 456 NNNYNNHF---IILHDILRDLGIYQSTKQPFEQRKRLIIDINKNRSELAEKQQSLLTRIL 512
Y++ F + HDILRDL ++ S + Q +RL++ K+ LL +
Sbjct: 853 --MYSSCFEISVTQHDILRDLALHLSNRGSIHQHRRLVM--------ATRKENGLLPKEW 1002
Query: 513 SKVMRLCIKQNPQQLAAHILSVSTDEACASDWSQMQPTQVEVLILNLHTKQYSFPESIKK 572
S+ Q A I+S++T E DW + + EVLI+N + +Y P I K
Sbjct: 1003SRY-------EDQPFEAQIVSINTGEMTKMDWFDLDFPKAEVLIINFTSTEYFLPPFINK 1161
Query: 573 MSKLKVLIITNYSFHPCELNNFELLGSLQNLEKIRLERILVPSFG--TLKNLKKLSLYMC 630
M L+ LII N+S L N + +L NL+ + LE++ +P L+NL KL + +C
Sbjct: 1162MPNLRALIIINHSTSHARLQNVSVFRNLTNLKSLWLEKVSIPQLSGTVLQNLGKLFVVLC 1341
Query: 631 NTILAFEKGSILISDAFPNLEELNIDYCKDLVVLQTGICDIISLKKLNVTNCHKLSSLPQ 690
+ L FPNL EL +D+C DL + IC I SL+ L++TNCH LS LP
Sbjct: 1342KI------NNSLDGKQFPNLSELTLDHCVDLTQFPSSICGIKSLQNLSLTNCHSLSQLPV 1503
Query: 691 DIGKLENLELLSFSSCTDLEAIPTSIGKLLNLKHLDISNCISLSSLPEEFGNLCNLKNLD 750
+ GKL +LE+L +C LE +P S+ + LK++DIS C++L+ PEE G L L+ +D
Sbjct: 1504EFGKLRSLEILRLYACPYLETLPPSMCDMKRLKYIDISQCVNLTCFPEEIGRLVCLEKID 1683
Query: 751 MASCASIE-LPFSVVNLQNLKTITCDEETAATWEDFQHMLPNMKIEVLHVDVNLNWL 806
M C I LP S V+LQ+L+ + CDEE W D + N+ I+V +L+WL
Sbjct: 1684MRECPMIRYLPKSAVSLQSLQLVICDEEVQDMWSDVEMSNSNVLIQVAEQHYDLDWL 1854
>TC221528 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance
protein-like protein MsR1, partial (32%)
Length = 720
Score = 314 bits (804), Expect = 1e-85
Identities = 153/240 (63%), Positives = 190/240 (78%), Gaps = 2/240 (0%)
Frame = +1
Query: 487 KRLIIDINKNRSEL--AEKQQSLLTRILSKVMRLCIKQNPQQLAAHILSVSTDEACASDW 544
KRL+IDI +N+ + EKQQ L+ R+LS + ++Q PQQ+ A LS+STDE C S W
Sbjct: 1 KRLMIDITENKPKWWPREKQQGLMIRVLSNIFGWRVEQKPQQIPARALSISTDETCTSYW 180
Query: 545 SQMQPTQVEVLILNLHTKQYSFPESIKKMSKLKVLIITNYSFHPCELNNFELLGSLQNLE 604
S +QP Q EVLILN T QY+FP+ +K+MSKLKVL + ++ FHP ++NNFELLGSL NL+
Sbjct: 181 SHLQPVQAEVLILNFQTNQYTFPKFLKEMSKLKVLTVIHHGFHPSKMNNFELLGSLSNLK 360
Query: 605 KIRLERILVPSFGTLKNLKKLSLYMCNTILAFEKGSILISDAFPNLEELNIDYCKDLVVL 664
+IRLERILVP F TLKNLKKLSL++CNT AFE G++LISDAFPNLE+LNIDYCKDL+ L
Sbjct: 361 RIRLERILVPPFVTLKNLKKLSLFLCNTRQAFENGNMLISDAFPNLEDLNIDYCKDLIEL 540
Query: 665 QTGICDIISLKKLNVTNCHKLSSLPQDIGKLENLELLSFSSCTDLEAIPTSIGKLLNLKH 724
G+CDI SLK L++TNCHKLS+LPQ G LENL+LL SSCTDL+ IP SIG+L NL+H
Sbjct: 541 PKGVCDITSLKMLSITNCHKLSALPQQFGNLENLKLLRLSSCTDLQEIPNSIGRLSNLRH 720
>TC233005 weakly similar to UP|Q6YIA0 (Q6YIA0) Disease resistance
protein-like protein MsR1, partial (29%)
Length = 691
Score = 298 bits (762), Expect = 8e-81
Identities = 155/243 (63%), Positives = 184/243 (74%), Gaps = 2/243 (0%)
Frame = +2
Query: 422 LDDNGIQAMEIINKLGIMNLANVIIPRKNASDTDNNNYNNHFIILHDILRDLGIYQSTKQ 481
LDDNG +AM II KL MNLANV++ RKNASDTDN Y+NHFIILHD+LR+L IYQST++
Sbjct: 5 LDDNGTEAMAIIKKLDSMNLANVLVARKNASDTDNYYYSNHFIILHDLLRELAIYQSTQE 184
Query: 482 PFEQRKRLIIDINKNRSE--LAEKQQSLLTRILSKVMRLCIKQNPQQLAAHILSVSTDEA 539
P E+RKRLII+IN+N+ L EK + L PQQ A LS+STDE
Sbjct: 185 PAEERKRLIIEINQNKPHWWLGEKSKLL---------------KPQQATAQTLSISTDEN 319
Query: 540 CASDWSQMQPTQVEVLILNLHTKQYSFPESIKKMSKLKVLIITNYSFHPCELNNFELLGS 599
C SDW Q+Q QVEVLI NL TKQYSFP+ +++M+KLKVLI+TNYSF+P E+NNFELLGS
Sbjct: 320 CCSDWPQIQLAQVEVLIFNLRTKQYSFPDFMEEMNKLKVLIVTNYSFYPSEINNFELLGS 499
Query: 600 LQNLEKIRLERILVPSFGTLKNLKKLSLYMCNTILAFEKGSILISDAFPNLEELNIDYCK 659
L NL++IRLERI VPSF +KNLKKLSLY+CN AFE +LIS FPNLEELNIDY K
Sbjct: 500 LSNLKRIRLERISVPSFVAMKNLKKLSLYLCNIKQAFENNDMLISYIFPNLEELNIDYSK 679
Query: 660 DLV 662
D+V
Sbjct: 680 DMV 688
>TC208943 weakly similar to UP|DR30_ARATH (Q9LZ25) Probable disease
resistance protein At5g04720, partial (38%)
Length = 1320
Score = 246 bits (629), Expect = 2e-65
Identities = 148/453 (32%), Positives = 248/453 (54%), Gaps = 6/453 (1%)
Frame = +3
Query: 297 LAHEDAVTLFHHYAQMEKNSSDIIDKNLVEKVVRSCKGLPLTIKVIATSLRNRPDDLWRK 356
L+ EDA++LF H+A +++ ++NLV++VV C LPL +KVI SLR++ + W
Sbjct: 33 LSEEDALSLFCHHAFGQRSIPLAANENLVKQVVTECGRLPLALKVIGASLRDQTEMFWMS 212
Query: 357 IVMELSQGHSILDSNT-ELLTRLQKIFDVLEDNPTIMECFMDIALFPEDHRIPVAALVDM 415
+ LSQG SI +S+ L+ R+ + L + I ECF+D+ FPED +IP+ L++M
Sbjct: 213 VKNRLSQGQSIGESHEINLIERMAISINYLPEK--IKECFLDLCCFPEDKKIPLDVLINM 386
Query: 416 WAKLYKLDDNGIQAMEIINKLGIMNLANVIIPRKNASDTDNNNYNNHF---IILHDILRD 472
W +++ + + +A I+ +L NL ++ + Y++ F + HD LRD
Sbjct: 387 WVEIHDIPET--EAYAIVVELSNKNLLTLMKEARAGG-----MYSSCFEISVTQHDELRD 545
Query: 473 LGIYQSTKQPFEQRKRLIIDINKNRSELAEKQQSLLTRILSKVMRLCIKQNPQQLAAHIL 532
L + + ++R+ L++ +N + + ++ + A I+
Sbjct: 546 LALNFRNHESIDERRLLVMPKKENG-----------------MPKEWLRYRHKPFEAQIV 674
Query: 533 SVSTDEACASDWSQMQPTQVEVLILNLHTKQYSFPESIKKMSKLKVLIITNYSFHPCELN 592
S+ T E DW ++ + EVLILN + +Y P I +M L+ LII NYS L
Sbjct: 675 SIHTGEMKEMDWCNLEFPKAEVLILNFTSTEYFLPPFINRMPNLRALIIINYSATYACLL 854
Query: 593 NFELLGSLQNLEKIRLERILVPSFGT--LKNLKKLSLYMCNTILAFEKGSILISDAFPNL 650
N + +L NL LE++ P + L+NL KL + +C + + + ++ FPNL
Sbjct: 855 NVSVFKNLSNLRSPWLEKVSTPELSSIVLENLGKLFIVLCKVNNSLVEKEVDLAQVFPNL 1034
Query: 651 EELNIDYCKDLVVLQTGICDIISLKKLNVTNCHKLSSLPQDIGKLENLELLSFSSCTDLE 710
EL +D+C DL L + IC + SL+ L++TNCH L+ LP ++GKL +LE+L +C L+
Sbjct: 1035LELTLDHCDDLTQLPSSICGMKSLQNLSLTNCHNLTELPVELGKLRSLEILRLYACPYLK 1214
Query: 711 AIPTSIGKLLNLKHLDISNCISLSSLPEEFGNL 743
+P SI ++ LK++DIS C++L+ LPE+ G L
Sbjct: 1215TLPNSICDMMRLKYIDISQCVNLTCLPEKIGRL 1313
>TC235133 similar to UP|Q6YIA0 (Q6YIA0) Disease resistance protein-like
protein MsR1, partial (11%)
Length = 758
Score = 213 bits (543), Expect = 2e-55
Identities = 105/189 (55%), Positives = 136/189 (71%), Gaps = 1/189 (0%)
Frame = +3
Query: 619 LKNLKKLSLYMCNTILAFEKGSILISDAFPNLEELNIDYCKDLVVLQTGICDIISLKKLN 678
LKNL K S +MCN AF+ +I +S FPNLEE+NIDYC D+V L G+ DI+SLKKL+
Sbjct: 24 LKNLHKFSFFMCNVNEAFKNSTIQVSKVFPNLEEMNIDYC-DMVELPIGLSDIVSLKKLS 200
Query: 679 VTNCHKLSSLPQDIGKLENLELLSFSSCTDLEAIPTSIGKLLNLKHLDISNCISLSSLPE 738
+TNCHKLS+LP+ IGKL NLE L +SCT LE +P SI L L LDIS+C+SLS LPE
Sbjct: 201 ITNCHKLSALPEGIGKLVNLESLRLTSCTKLEELPESITSLSKLNFLDISDCVSLSKLPE 380
Query: 739 EFGNLCNLKNLDMASCASI-ELPFSVVNLQNLKTITCDEETAATWEDFQHMLPNMKIEVL 797
G L +L+NL+ C + +LP+S+ L++L + CDEETAA WE F+ ML ++K++V
Sbjct: 381 NMGELRSLENLNCRGCTRLTDLPYSITELESLSAVVCDEETAALWEPFKTMLRDLKLKVA 560
Query: 798 HVDVNLNWL 806
VD NLNWL
Sbjct: 561 QVDFNLNWL 587
>BM085135 weakly similar to GP|27808630|gb| At5g66630 {Arabidopsis thaliana},
partial (6%)
Length = 420
Score = 183 bits (464), Expect = 3e-46
Identities = 90/139 (64%), Positives = 113/139 (80%)
Frame = +3
Query: 236 NKLELLLKKVEGSPLLLVLDDVWPTSESLVKKLQFEISDFKILVTSRVSFPRFRTTCILK 295
N+L LLL+K++ SP+LLVLDDVWP SE+LV+K + +ISD+KILVTSR++F RF T ILK
Sbjct: 3 NQLGLLLRKIDASPMLLVLDDVWPGSEALVEKFKVQISDYKILVTSRIAFHRFGTPFILK 182
Query: 296 PLAHEDAVTLFHHYAQMEKNSSDIIDKNLVEKVVRSCKGLPLTIKVIATSLRNRPDDLWR 355
PL H DA+TLF H+A +EKNSS+I D+ LV+KVVR CKGLPL IKVI SL NR ++W+
Sbjct: 183 PLVHNDAITLFRHHALLEKNSSNIPDEYLVQKVVRHCKGLPLAIKVIGRSLSNRSYEMWQ 362
Query: 356 KIVMELSQGHSILDSNTEL 374
K+V E S GH+ILDSN EL
Sbjct: 363 KMVEEFSHGHTILDSNIEL 419
>TC228381 similar to UP|Q6YIA0 (Q6YIA0) Disease resistance protein-like
protein MsR1, partial (14%)
Length = 420
Score = 163 bits (412), Expect(2) = 1e-42
Identities = 82/121 (67%), Positives = 100/121 (81%), Gaps = 1/121 (0%)
Frame = +3
Query: 565 SFPESIKKMSKLKVLIITNYSFHPCELNNFELLGSLQN-LEKIRLERILVPSFGTLKNLK 623
S P+ I++M+KLKVLI+TNYSF+P +NNFEL+GSL N L++IRLERI VPSF +KNLK
Sbjct: 57 SXPDFIEEMNKLKVLIVTNYSFYPSVMNNFELIGSLSNNLKRIRLERISVPSFVAMKNLK 236
Query: 624 KLSLYMCNTILAFEKGSILISDAFPNLEELNIDYCKDLVVLQTGICDIISLKKLNVTNCH 683
KLSLY+CN AFE +LIS AFP+LEELNIDY KD+V L +CDIISLKKL++TNCH
Sbjct: 237 KLSLYLCNMKRAFENNDMLISYAFPSLEELNIDYSKDMVGLPKELCDIISLKKLSITNCH 416
Query: 684 K 684
K
Sbjct: 417 K 419
Score = 29.3 bits (64), Expect(2) = 1e-42
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 547 MQPTQVEVLILNLHTKQY 564
MQ +VEVLILN+ TKQY
Sbjct: 2 MQLAEVEVLILNIRTKQY 55
>TC210296 weakly similar to UP|DR29_ARATH (Q9SZA7) Probable disease
resistance protein At4g33300, partial (13%)
Length = 794
Score = 161 bits (407), Expect = 1e-39
Identities = 80/220 (36%), Positives = 133/220 (60%), Gaps = 4/220 (1%)
Frame = +2
Query: 591 LNNFELLGSLQNLEKIRLERILVPSFGT--LKNLKKLSLYMCNTILAFEKGSILISDAFP 648
L N + +L + L + P + L+NL KL + +C + + ++ FP
Sbjct: 2 LLNVSVFKNLSXXRSLWLXXVPXPELSSIVLENLGKLFIVLCKVNXXXVEKEVDLAQVFP 181
Query: 649 NLEELNIDYCKDLVVLQTGICDIISLKKLNVTNCHKLSSLPQDIGKLENLELLSFSSCTD 708
NL EL +D+C DL+ L + IC + SL+ L++TNCH L+ LP ++GKL +LE+L +C D
Sbjct: 182 NLLELTLDHCDDLIQLPSSICGMKSLQNLSLTNCHNLTQLPVELGKLRSLEILRLYACPD 361
Query: 709 LEAIPTSIGKLLNLKHLDISNCISLSSLPEEFGNLCNLKNLDMASCASI-ELPFSVVNLQ 767
L+ +P SI ++ LK++DIS C++L+ PEE G+L +L+ +DM C+ I +P S ++LQ
Sbjct: 362 LKTLPNSISHMIRLKYMDISQCVNLTCFPEEIGSLVSLEKIDMRECSMIRNVPKSALSLQ 541
Query: 768 NLKTITCDEETAATWEDFQHMLP-NMKIEVLHVDVNLNWL 806
+L+ + CDEE + W++ + P N I+V +L+WL
Sbjct: 542 SLRLVICDEEVSGIWKEVEKAKPNNFHIQVSEQYFDLDWL 661
>TC204790 weakly similar to UP|Q9LG50 (Q9LG50) ESTs AU078742(C11888), partial
(3%)
Length = 722
Score = 153 bits (386), Expect = 3e-37
Identities = 72/106 (67%), Positives = 87/106 (81%)
Frame = +3
Query: 701 LSFSSCTDLEAIPTSIGKLLNLKHLDISNCISLSSLPEEFGNLCNLKNLDMASCASIELP 760
L+ SSCTDLE IP SI KL L+ LD+SNCISLS LPE+ G+LCNL+NL+M SCA ELP
Sbjct: 3 LNLSSCTDLEEIPDSIVKLSKLRLLDLSNCISLSILPEDIGDLCNLRNLNMTSCARCELP 182
Query: 761 FSVVNLQNLKTITCDEETAATWEDFQHMLPNMKIEVLHVDVNLNWL 806
+SV NL+NLK + CDEETAA+WE F+ MLPN+K+EV V+VNLNWL
Sbjct: 183 YSVTNLENLKVVVCDEETAASWEAFEAMLPNLKLEVPRVEVNLNWL 320
>BG359519 weakly similar to GP|21655203|gb| NBS/LRR {Pinus taeda}, partial
(5%)
Length = 336
Score = 151 bits (382), Expect = 1e-36
Identities = 76/112 (67%), Positives = 89/112 (78%)
Frame = +3
Query: 297 LAHEDAVTLFHHYAQMEKNSSDIIDKNLVEKVVRSCKGLPLTIKVIATSLRNRPDDLWRK 356
L HEDAVTLF HYA +E++ S I D+ LV+KVVR CKGLPL +KVI SL ++P +LW K
Sbjct: 3 LVHEDAVTLFRHYALLEEHGSSIPDEELVQKVVRICKGLPLAVKVIGRSLSHQPSELWLK 182
Query: 357 IVMELSQGHSILDSNTELLTRLQKIFDVLEDNPTIMECFMDIALFPEDHRIP 408
+V ELSQ HSILDSNTELLT LQKI +V ED+P I ECFMD+ LFPED RIP
Sbjct: 183 MVEELSQ-HSILDSNTELLTCLQKILNVXEDDPVIKECFMDLGLFPEDQRIP 335
>TC204793
Length = 457
Score = 141 bits (355), Expect = 1e-33
Identities = 66/99 (66%), Positives = 81/99 (81%)
Frame = +2
Query: 708 DLEAIPTSIGKLLNLKHLDISNCISLSSLPEEFGNLCNLKNLDMASCASIELPFSVVNLQ 767
DLE +P SIG+L L+ LDISNCISL +LPE+FGNL NL+NL M SCA E+P S+ NL+
Sbjct: 8 DLEGLPDSIGRLSKLRLLDISNCISLPNLPEDFGNLSNLQNLYMTSCARCEVPPSIANLE 187
Query: 768 NLKTITCDEETAATWEDFQHMLPNMKIEVLHVDVNLNWL 806
NLK + CDEETAA+WEDF+ +LPN+KI+V VDVNLNWL
Sbjct: 188 NLKEVVCDEETAASWEDFKPLLPNLKIDVPQVDVNLNWL 304
Score = 36.6 bits (83), Expect = 0.045
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 567 PESIKKMSKLKVLIITNYSFHPCELNNFELLGSLQNLEKIRLERILV-PSFGTLKNLKKL 625
P+SI ++SKL++L I+N P +F L +LQNL R V PS L+NLK+
Sbjct: 23 PDSIGRLSKLRLLDISNCISLPNLPEDFGNLSNLQNLYMTSCARCEVPPSIANLENLKE- 199
Query: 626 SLYMCNTILAFEKGSILISDAFPNLEELNID 656
++ E+ + D P L L ID
Sbjct: 200 -------VVCDEETAASWEDFKPLLPNLKID 271
Score = 31.2 bits (69), Expect = 1.9
Identities = 23/63 (36%), Positives = 29/63 (45%)
Frame = -2
Query: 680 TNCHKLSSLPQDIGKLENLELLSFSSCTDLEAIPTSIGKLLNLKHLDISNCISLSSLPEE 739
T K S L + G +L+ C L+ +P S GKL L +IS S SLP E
Sbjct: 204 TTSFKFSRLAIEGGTSHLAQLVM*RFCR-LDRLPKSSGKLGRLMQFEISRSRSFESLPIE 28
Query: 740 FGN 742
GN
Sbjct: 27 SGN 19
>AI736591
Length = 414
Score = 140 bits (353), Expect = 2e-33
Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 3/132 (2%)
Frame = +1
Query: 394 CFMDIALFPEDHRIPVAALVDMWAKLYKLDDNGIQAMEIINKLGIMNLANVIIPRKNASD 453
CFMD+ LFPED RIPVAAL+DMWA+L+ LD+NG AM II+ L I NL NVI+ RK A D
Sbjct: 19 CFMDLGLFPEDQRIPVAALIDMWAELHNLDENGRNAMTIIHDLTIRNLINVIVTRKVAKD 198
Query: 454 TDNNNYNNHFIILHDILRDLGIYQSTKQPFEQRKRLIIDIN-KNRSE--LAEKQQSLLTR 510
D YNNHF++LHD+LR+L I QS ++PFEQR+RLIID+N NR E + + +Q ++
Sbjct: 199 AD-MYYNNHFVMLHDLLRELSICQSKEKPFEQRERLIIDLNGDNRPEWWIGQDEQGVIGP 375
Query: 511 ILSKVMRLCIKQ 522
+ S +R+ +Q
Sbjct: 376 MSSFFLRMLYRQ 411
>TC223248 similar to UP|Q6YIA0 (Q6YIA0) Disease resistance protein-like
protein MsR1, partial (9%)
Length = 467
Score = 140 bits (353), Expect = 2e-33
Identities = 74/122 (60%), Positives = 93/122 (75%)
Frame = +1
Query: 250 LLLVLDDVWPTSESLVKKLQFEISDFKILVTSRVSFPRFRTTCILKPLAHEDAVTLFHHY 309
+LL LDDVWP SE+LVKK Q I D KILVT+RV FPR T CILKPL H+DA+TLF HY
Sbjct: 1 MLLFLDDVWPVSEALVKKFQVLILDSKILVTTRVGFPRLGTQCILKPLVHDDAITLFRHY 180
Query: 310 AQMEKNSSDIIDKNLVEKVVRSCKGLPLTIKVIATSLRNRPDDLWRKIVMELSQGHSILD 369
A +E++ S I + +++KVV++CKGLPL+IKVI +SL N+P +L K V ELSQ +LD
Sbjct: 181 ASLEESCSS-ISEEVIQKVVKNCKGLPLSIKVIGSSLCNQPFEL*PKTVEELSQ--CLLD 351
Query: 370 SN 371
SN
Sbjct: 352 SN 357
Score = 41.2 bits (95), Expect = 0.002
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 366 SILDSNTELLTRLQKIFDVLEDNPTIMECFMDIALFPEDHRIPVAALVDMWAKL 419
S+L + ++ +L + ++ ECF D+ LFPE RIP +L+DM ++
Sbjct: 296 SLLSCDQRPWRNCPNVYLILTSDNSVKECFRDLXLFPEXQRIPFTSLIDMLGRI 457
>BF068857
Length = 391
Score = 139 bits (351), Expect = 4e-33
Identities = 76/130 (58%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Frame = +2
Query: 553 EVLILNLHTKQYSFPESIKKMSKLKVLIITNYSFHPCELNNFELLGSLQNLEKIRLERIL 612
+VL+LNL TK+YSFP I+KM++LKVLI+T Y FHPCEL N LL S+ +L +IRL+RI
Sbjct: 2 DVLVLNL*TKKYSFPHYIEKMTELKVLIMTYYGFHPCELYNTTLLCSVSDLRRIRLDRIS 181
Query: 613 VPSFGTLKNLKKLSLYMCNTI-LAFEKGSILISDAFPNLEELNIDYCKDLVVLQTGICDI 671
VP F L NL LSLYMC I AFE G+I D+F L +L I YC D+V L T ICDI
Sbjct: 182 VPHFRALNNLGMLSLYMCRNISQAFENGTITGLDSFTILSDLYIVYCYDMVRLSTVICDI 361
Query: 672 ISLKKLNVTN 681
SL KLN+T+
Sbjct: 362 ASLAKLNITS 391
>AI941453 weakly similar to GP|9758140|dbj| disease resistance protein-like
{Arabidopsis thaliana}, partial (7%)
Length = 410
Score = 115 bits (288), Expect = 8e-26
Identities = 56/92 (60%), Positives = 68/92 (73%)
Frame = +1
Query: 535 STDEACASDWSQMQPTQVEVLILNLHTKQYSFPESIKKMSKLKVLIITNYSFHPCELNNF 594
S DE SDW M P + EVL+ NL++ QY P+ + MSKLKVLI+TNY FH ELNNF
Sbjct: 133 SADETFTSDWCDMLPDEAEVLVXNLNSSQYPLPKFTENMSKLKVLIVTNYGFHRSELNNF 312
Query: 595 ELLGSLQNLEKIRLERILVPSFGTLKNLKKLS 626
ELLGSL NL++IRLE++ VPS LKNL+KLS
Sbjct: 313 ELLGSLSNLKRIRLEKVSVPSLCILKNLRKLS 408
>TC218702
Length = 1198
Score = 108 bits (271), Expect = 7e-24
Identities = 50/71 (70%), Positives = 59/71 (82%)
Frame = +2
Query: 736 LPEEFGNLCNLKNLDMASCASIELPFSVVNLQNLKTITCDEETAATWEDFQHMLPNMKIE 795
LPE+FGNL NL+NL M SCA ELP S+ NL+NLK + CDEETAA+WEDF+ MLPN+KI+
Sbjct: 2 LPEDFGNLFNLQNLYMTSCARCELPPSIANLENLKEVVCDEETAASWEDFKPMLPNLKID 181
Query: 796 VLHVDVNLNWL 806
V VDVNLNWL
Sbjct: 182 VPQVDVNLNWL 214
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.136 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,661,647
Number of Sequences: 63676
Number of extensions: 494802
Number of successful extensions: 2941
Number of sequences better than 10.0: 260
Number of HSP's better than 10.0 without gapping: 2582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2777
length of query: 807
length of database: 12,639,632
effective HSP length: 105
effective length of query: 702
effective length of database: 5,953,652
effective search space: 4179463704
effective search space used: 4179463704
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Medicago: description of AC148347.6