TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148292.5 + phase: 0 /pseudo
         (1454 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%)       46  1e-04
TC211663                                                               41  0.003
TC204438 homologue to UP|Q84VH6 (Q84VH6) Gag-pol polyprotein, co...    40  0.006
BQ296988 similar to GP|21740616|em OSJNBb0089K24.12 {Oryza sativ...    40  0.007
BU548243                                                               40  0.010
TC204439 UP|Q84VI4 (Q84VI4) Gag-pol polyprotein, complete              39  0.017
TC230101 similar to UP|Q41707 (Q41707) Extensin class 1 protein ...    38  0.037
TC231899 similar to UP|Q850H7 (Q850H7) Gag-pol polyprotein (Frag...    38  0.037
TC231544 weakly similar to UP|Q9FLR2 (Q9FLR2) Polyprotein-like, ...    37  0.063
BI317550 weakly similar to GP|9759590|dbj| polyprotein-like {Ara...    37  0.083
TC211332 similar to UP|Q8L470 (Q8L470) Small heat shock protein,...    36  0.11
TC226103 weakly similar to UP|Q9FGQ2 (Q9FGQ2) MtN3-like protein,...    35  0.24
TC204052 homologue to UP|Q39835 (Q39835) Extensin, partial (67%)       35  0.32
TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein ...    34  0.54
TC224025 weakly similar to UP|Q6HXC4 (Q6HXC4) Conserved domain p...    34  0.54
AW756455 weakly similar to SP|P46263|TBB1 Tubulin beta-1 chain. ...    33  0.70
TC212543 weakly similar to UP|FKB7_WHEAT (Q43207) 70 kDa peptidy...    33  0.70
AW756490 similar to SP|Q96453|143D 14-3-3-like protein D (SGF14D...    33  0.70
CA784773 weakly similar to GP|27901698|gb gag-pol polyprotein {V...    33  0.70
TC233882                                                               33  0.92

>TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%)
          Length = 1005

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 64/279 (22%), Positives = 115/279 (40%), Gaps = 9/279 (3%)
 Frame = -2

Query: 363 LFLISQVYKVLSHALFISILCLFGS*IQALMIMYVFQNLISLLFTKSNLCLLLFPMVIPY 422
           L+     +K+L  +  I  L L  +    L++++VF  L+   F  + L  + F     Y
Sbjct: 788 LYFSVNFFKLLLQSAKILGLVLSSNFFLLLLLVFVFFFLLLFHFLPTILSFIFFFTFFFY 609

Query: 423 MFI---------MLVMYILLLICT*IMFCILLNSKST*FLFPKCVIPYLVVAISFRINVL 473
            F          + ++++ LL     +F ILL      FLF           ISF I   
Sbjct: 608 FFYINIPNRNFNLAILFLTLLFILLFLFVILLFLLLILFLF----------LISFII--- 468

Query: 474 YRM*HHIR*LVWVINQMVSTHCLCSFLIRRCILIAVLSLYQIKWHIVLVLFLILVLLSLK 533
                    L ++I  +    C+C F+     L  +L        + + LFL+L  +++ 
Sbjct: 467 ---------LTFIIFSLF-L*CVCFFIFILLFLFLLL--------LFIFLFLLLFTITVS 342

Query: 534 LCLIVLEYLNLHCGISGLVICRIIDCPL*LICIPLLLLIIKLHVMFVILPDIRNCPFPIV 593
              ++L  +          I  II  PL  +CI  ++L +   ++F+ILP I       +
Sbjct: 341 FFFVLLFLIPF--------IFPIIFFPLDFLCINFVILFLLFLLLFIILPIIF-----FL 201

Query: 594 LLMLAVNFSYFILIFGDPLLLILFMVTNIFSP*LMITLD 632
           L +L ++F+  + +    LL +LF++  I  P +   LD
Sbjct: 200 LDLLCISFAILVFL----LLFLLFLLLFIILPIIFFPLD 96



 Score = 38.5 bits (88), Expect = 0.022
 Identities = 38/144 (26%), Positives = 66/144 (45%)
 Frame = -2

Query: 803 MFYMIYILERSSYLDMLFFMNVFYHINPFPHLRVLIGNISLPFHPFLSFLLFLISLILHQ 862
           +F +++ +  S +  +LF +   + I  FP   + I  + L    FL FLL  I L +  
Sbjct: 374 LFLLLFTITVSFFFVLLFLIPFIFPIIFFPLDFLCINFVIL----FLLFLLLFIILPIIF 207

Query: 863 LLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*RIIFVLINHLHLSITCTLFLI 922
            L   L +S  +L+  L+ LL L    +LP          IIF  ++ L++S    +F+ 
Sbjct: 206 FLLDLLCISFAILVFLLLFLLFLLLFIILP----------IIFFPLDLLYISFVTLVFVF 57

Query: 923 MFLIITSLIPTLISFCLFMLIMNP 946
            FL++      L+   LF+  + P
Sbjct: 56  FFLLL------LLILLLFLFTIVP 3



 Score = 33.1 bits (74), Expect = 0.92
 Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
 Frame = -2

Query: 804 FYMIYILERSSYLDMLFFMNVFYHINPFPHLRVLIGNISLPFHPFLSFLLFLISLILHQL 863
           F+++      + L  +FF   F++   F ++ +   N +L    FL+ LLF++  +   L
Sbjct: 680 FFLLLFHFLPTILSFIFFFTFFFY---FFYINIPNRNFNLAIL-FLT-LLFILLFLFVIL 516

Query: 864 LNMFLILSLQLLLHPLMTLLVLHP--------LDVLPEIKSLLLI*RIIFVLINHLHLSI 915
           L + LIL L L+   ++T ++           + +L     L L   ++F+ +  L  +I
Sbjct: 515 LFLLLILFLFLISFIILTFIIFSLFL*CVCFFIFIL-----LFLFLLLLFIFLFLLLFTI 351

Query: 916 TCTLFLIMFLIITSLIPTLISFCLFMLIMN 945
           T + F ++  +I  + P +I F L  L +N
Sbjct: 350 TVSFFFVLLFLIPFIFP-IIFFPLDFLCIN 264


>TC211663 
          Length = 426

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 41/135 (30%), Positives = 57/135 (41%)
 Frame = -1

Query: 88  PLLKILSFTITL*MFGRT*KRDSQKLIESEFLLFVLPSTI*SREVKLFLNTSLRCVHFGK 147
           PLLK+L     L  FG  *++   K I  +   F    T  S+    F   SL    FGK
Sbjct: 426 PLLKLLYILTMLQTFGMI*RKVFHKGIYCKLQSFKKRYTDSSKGRTQFWIFSLSSNLFGK 247

Query: 148 NLIHIDLFQIVLAFIDAVVKLQLVLMFIVLKTKSCNSSLD*MINFQLSRLRSCLWILFHP 207
           N   +D      A + A + +  +L F   K          M +F L  L+SCLWI++H 
Sbjct: 246 N*TIMD--S*TFALVRAELTINRILSFTFSKGW--------MNDFLLCALKSCLWIIYHQ 97

Query: 208 *TRCILW*FKKRVIM 222
                 W*F  ++ M
Sbjct: 96  PRESFPW*FNTKLNM 52


>TC204438 homologue to UP|Q84VH6 (Q84VH6) Gag-pol polyprotein, complete
          Length = 4734

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 31/96 (32%), Positives = 49/96 (50%)
 Frame = +2

Query: 944  MNPKPTLRQTSLNVGGKLCKLSSLLLKILELGR*LIHLLMLNL*AVGGFTRLSIMQMTLL 1003
            ++P+   R   ++ G  LCK +    K ++ G * +    L   A  G +R   M+  L 
Sbjct: 3200 LSPRM*KRH*LMSSGSMLCKKNWSNSKGMKFGS*FLDPRELM*LAPSGSSRTKPMKKVL* 3379

Query: 1004 KDTRPDLLLKATIK*RGWTTLTHIPL*PNTPPSDWF 1039
             +TRPDLLLKAT++ +  T +   PL  +  PSD +
Sbjct: 3380 PETRPDLLLKATLRLKV*TLMKLSPLLLDLSPSDCY 3487


>BQ296988 similar to GP|21740616|em OSJNBb0089K24.12 {Oryza sativa (japonica
           cultivar-group)}, partial (1%)
          Length = 408

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 43/126 (34%), Positives = 56/126 (44%)
 Frame = -2

Query: 73  ATI*FIHGLSIPFLNPLLKILSFTITL*MFGRT*KRDSQKLIESEFLLFVLPSTI*SREV 132
           A  *FI G S P   P        ITL M G  *K  S K+I   F  F    T+  + +
Sbjct: 404 AIC*FIAGFSTPLNLPFPDPSFSWITLPMCGSI*KSVSHKVIWFVFQKFNKRFTLSLKVL 225

Query: 133 KLFLNTSLRCVHFGKNLIHIDLFQIVLAFIDAVVKLQLVLMFIVLKTKSCNSSLD*MINF 192
            L L + L    FGKNL     FQI    I  +V   ++L+ I+++   C S L * +N 
Sbjct: 224 DL*LLSILIRKRFGKNLKFTCRFQIAHVIIVVLVMRCVLLVVIIIRFMLCVS*LV*TMNS 45

Query: 193 QLSRLR 198
               LR
Sbjct: 44  MRLNLR 27


>BU548243 
          Length = 599

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 40/121 (33%), Positives = 59/121 (48%)
 Frame = -2

Query: 1321 FLVIH*SHGGPRNNSLSLGLLLKLNIEHWEQLPVSFNG*CIF*KICRLLALEFLCCTVIT 1380
            FL   *  GG  ++ L L L+ + +IE   +LP++  G  +F*   R L+L  L C  I 
Sbjct: 529  FLAPI*FPGGLASSRLLLSLVQRQSIEVLLRLPLNLLGFRLF*WNFRFLSLLRLYCVTI- 353

Query: 1381 RVLFTSQLIQCSMKELNIWKLTATLSEKNLQQES*NFFPFPLKINLQIVLLSPFFLSLSI 1440
            RVL        S  E +IWKL ++L  +     +     F   I+L ++    F LSLS+
Sbjct: 352  RVLLPLHTTWFSTAEQSIWKLMSSLCMRRCCPSN-----FRSSISLPLISGLAF*LSLSL 188

Query: 1441 L 1441
            L
Sbjct: 187  L 185


>TC204439 UP|Q84VI4 (Q84VI4) Gag-pol polyprotein, complete
          Length = 4731

 Score = 38.9 bits (89), Expect = 0.017
 Identities = 29/96 (30%), Positives = 49/96 (50%)
 Frame = +2

Query: 944  MNPKPTLRQTSLNVGGKLCKLSSLLLKILELGR*LIHLLMLNL*AVGGFTRLSIMQMTLL 1003
            ++P+   R   ++ G  LCK +    K ++ G * + L  L   A  G +R   M+    
Sbjct: 3197 LSPRM*KRH*QMSSGSMLCKKNWSNSKGMKSGS*FLGLRELM*LAPSGSSRTKPMKKVS* 3376

Query: 1004 KDTRPDLLLKATIK*RGWTTLTHIPL*PNTPPSDWF 1039
             +TRPD LLKAT++ +  T +  +P   +  PSD++
Sbjct: 3377 PETRPDWLLKATLRLKV*TLMRLLPQLLDLSPSDYY 3484


>TC230101 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
           partial (47%)
          Length = 944

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 26/130 (20%)
 Frame = +3

Query: 827 HINPFPHLRVLIGNISLPFHPFLSFLLF-LISLILHQL--LNMFLILSL-----QLLLHP 878
           H+   PH  +L+ + SL  HP L  LL  +I+L  H L  L+  +I+SL      LL HP
Sbjct: 201 HLTSTPHHLLLLTSTSLLPHPLLHLLLHTIINLHHHPLPHLHPLIIISLHHHLHHLLHHP 380

Query: 879 LMTLLVLH----PLDVLPEIK------SLLLI*RIIFVLINHL----HLSITCTLF---- 920
           ++T L LH    PL +   I        LL    I  +L +HL    HL+IT  L     
Sbjct: 381 IITSLHLHLKSLPLQLPTTISLHHHLLHLLHHPTITSLLHHHLPHPPHLTITRLLLHHLP 560

Query: 921 LIMFLIITSL 930
            +  LIITSL
Sbjct: 561 HLHLLIITSL 590


>TC231899 similar to UP|Q850H7 (Q850H7) Gag-pol polyprotein (Fragment), partial
            (30%)
          Length = 687

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
 Frame = +3

Query: 1329 GGPRNNSLSLGLLLKLNIEHWEQLPVSFNG*CIF*KICRLLALEFLC---CTVITRVLFT 1385
            G  RN  L LGL+ KLNI+ W  L V+    C     C+       C   C VI R+LF 
Sbjct: 114  GKARNRRL*LGLVQKLNIDRWLWLLVNS---CGLNNFCKN*GFVKSCK*SCIVIIRLLFI 284

Query: 1386 SQLIQCSMKELNIWKLTATLSEKNLQQES*NFFPFPLKINLQIVLLS 1432
                Q  MK L+I +L     E+       +F P  L ++  ++++S
Sbjct: 285  LPQTQSFMKGLSI*RLIVISFER-------SFCPRRLSLSSLVLMIS 404


>TC231544 weakly similar to UP|Q9FLR2 (Q9FLR2) Polyprotein-like, partial (16%)
          Length = 662

 Score = 37.0 bits (84), Expect = 0.063
 Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
 Frame = +1

Query: 1302 MLTGQVVETPEDPFLGNVSFLVIH*SHGGPRNNSL--SLGLLLKLNIEHWEQLPVSFNG* 1359
            M  GQ V        G  SFLV+ *SHG  RN +L  +    LKL+IE       +++G 
Sbjct: 112  MPIGQHVLIQASQSHGTASFLVVL*SHGKLRNKTLFPAHPHPLKLSIELSPPPHANYSGL 291

Query: 1360 CIF*KICRLLALEFLCCTVITRVLFTSQLIQCSMK--ELNIWKLTATLSEKNLQQE 1413
              F*KI  LL        V  +VL  S    C  K   ++ W+L ATL E+ L ++
Sbjct: 292  LTF*KISMLL*Y-----IVTIKVLCNS----CQSK*YIMDNWRLIATLFERRLNKD 432


>BI317550 weakly similar to GP|9759590|dbj| polyprotein-like {Arabidopsis
            thaliana}, partial (18%)
          Length = 421

 Score = 36.6 bits (83), Expect = 0.083
 Identities = 24/59 (40%), Positives = 31/59 (51%)
 Frame = -3

Query: 1150 MNSLLLRIFFTIPSKLKIWASLNISWVWRLLIQN*AFLCAKGSMVWICCLIQVF*IQNL 1208
            MN    R+F    SKLKIW S N     +LLI +      +G++VWIC  IQ +   NL
Sbjct: 236  MNLTGSRMFLI*LSKLKIWVS*NTFLGLKLLILDWVLPSHRGNIVWICLRIQDYLGANL 60


>TC211332 similar to UP|Q8L470 (Q8L470) Small heat shock protein, partial
           (45%)
          Length = 544

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 21/54 (38%), Positives = 31/54 (56%), Gaps = 6/54 (11%)
 Frame = -2

Query: 847 PFLSFLLFLISLILHQLLNMFLILSL------QLLLHPLMTLLVLHPLDVLPEI 894
           PFL FLL  + L  H L+ + L+L L       LLLHP + +L++HP  + P +
Sbjct: 252 PFLLFLLLFL-L*FHNLILLLLLLCLLSLDHKHLLLHPHLHILLVHPRHIKPHL 94


>TC226103 weakly similar to UP|Q9FGQ2 (Q9FGQ2) MtN3-like protein, partial (67%)
          Length = 1423

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 22/82 (26%), Positives = 42/82 (50%)
 Frame = -3

Query: 846  HPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*RIIF 905
            HP L F++  + ++L         +  +L++  L+ LL+LH L        LL++  I+F
Sbjct: 1043 HPLLCFVVVFVDVVL---------VEFRLVMSNLVKLLILHRL--------LLILLIILF 915

Query: 906  VLINHLHLSITCTLFLIMFLII 927
            +L+ +L++S     F  +F  I
Sbjct: 914  LLLTNLYISTLRLYFFFLFFTI 849


>TC204052 homologue to UP|Q39835 (Q39835) Extensin, partial (67%)
          Length = 1083

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 39/134 (29%), Positives = 59/134 (43%), Gaps = 10/134 (7%)
 Frame = +1

Query: 826 YHINPFPHLRVLIGNISLPFHPFLSFLLFLIS---------LILHQLLNMFLILSLQLLL 876
           +H     HL  L   I+L  H     LL +I+         L+LH  + +  +LS+ LLL
Sbjct: 133 HHHQSIHHL--LHTTITLHHHQSTHHLLLIITTLHHHQSTHLLLHTTITLHPLLSILLLL 306

Query: 877 HPLMTL-LVLHPLDVLPEIKSLLLI*RIIFVLINHLHLSITCTLFLIMFLIITSLIPTLI 935
           H ++TL  +L  L  LP   +LL       +L  HL L  T TL  ++  ++     T +
Sbjct: 307 HTIITLHHLLSTLLHLPTTTTLL------HLLSIHLLLHTTTTLHHLLSTLLLLHTTTTL 468

Query: 936 SFCLFMLIMNPKPT 949
              L  L+  P  T
Sbjct: 469 HHLLSTLLHLPTTT 510



 Score = 32.7 bits (73), Expect = 1.2
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
 Frame = +1

Query: 806 MIYILERSSYLDMLFFMNVFYHINPFPHL--RVLIGNISLPFHPFLSFLLFL-ISLILHQ 862
           ++++   ++ L +L    + +      HL   +L+ + +   H  LS LL L  +  L  
Sbjct: 343 LLHLPTTTTLLHLLSIHLLLHTTTTLHHLLSTLLLLHTTTTLHHLLSTLLHLPTTTTLFH 522

Query: 863 LLNMFLILSLQLLLHPLM-TLLVLHPLDVLPEIKSLLLI*RIIFVLINH 910
           LL++ L+L     LH L+ TLL+LH    L  + S  L+  I  +L  H
Sbjct: 523 LLSIHLLLHTTTTLHHLLSTLLLLHTTTTLHHLLSTHLLLHITIILHPH 669


>TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
           partial (67%)
          Length = 1240

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
 Frame = +1

Query: 818 MLFFMNVFYHINPFPHLRVLIGNISLPFHPFLSFLLFLISLI-----LHQLLNMFLILSL 872
           +L  +N+ +H++ F +   +I       HP L   L L+++I     LHQ LN   I++L
Sbjct: 187 LLTIINLPHHLHQFLNPHTII-----TLHPHLHHPLLLLTIINLPHHLHQFLNPHTIITL 351

Query: 873 QLLLHPLM---TLLVLHPLDVLPEIKSLLLI*RI----------IFVLINHLHLSITCTL 919
            L  H L+   T++  HP    P +  LL I  +          + ++I HLHL    TL
Sbjct: 352 HLHHHLLLLPHTIINHHPHLHHPLL--LLTIINLPHHLHHPHHHLIIIIPHLHLKSMYTL 525



 Score = 32.0 bits (71), Expect = 2.0
 Identities = 28/87 (32%), Positives = 41/87 (46%), Gaps = 6/87 (6%)
 Frame = +1

Query: 833 HLRVLIGNISLPFHPFLSFLLFLISLI-----LHQLLNMFLILSLQ-LLLHPLMTLLVLH 886
           H  +L+ +  +  HP L   L L+++I     LHQ LN   I++L   L HPL+ L +++
Sbjct: 121 HHLLLLPHTIINHHPHLHHPLLLLTIINLPHHLHQFLNPHTIITLHPHLHHPLLLLTIIN 300

Query: 887 PLDVLPEIKSLLLI*RIIFVLINHLHL 913
               LP      L    I  L  H HL
Sbjct: 301 ----LPHHLHQFLNPHTIITLHLHHHL 369


>TC224025 weakly similar to UP|Q6HXC4 (Q6HXC4) Conserved domain protein,
           partial (15%)
          Length = 614

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
 Frame = +2

Query: 821 FMNVFYHINPFPHLRVLIGNISLPFHPFLSFLLFLISLILHQLLNMFLILSLQ------- 873
           F++V   ++  P+L  L   ++LP+   L  L  L  L LH +L++   LSL        
Sbjct: 71  FLSVPPVLSTLPYLSALPVLLTLPYLSVLPVLSTLPYLSLHPVLSILPYLSLHPVLSILP 250

Query: 874 -LLLHPLMTL---LVLHP-LDVLPEIKSLLLI*RIIFVLINHLHLSITCTLFLIMFLIIT 928
            L LHP++++   L LHP L  LP    LL +  ++  L +     +  TL  +  L + 
Sbjct: 251 YLSLHPVLSILPYLSLHPVLSTLP----LLSLHPVLSTLPSLSLHPVLSTLPSLSLLPVL 418

Query: 929 SLIPTL 934
           S +P+L
Sbjct: 419 STLPSL 436



 Score = 32.7 bits (73), Expect = 1.2
 Identities = 32/94 (34%), Positives = 47/94 (49%), Gaps = 15/94 (15%)
 Frame = +2

Query: 816 LDMLFFMNVFYHINPFPHLRVLIGNISLPF---HPFLSFLLFLISLILHQLLNMFLILSL 872
           L  L +++    +   P+L VL    +LP+   HP LS L +L    LH +L++   LSL
Sbjct: 92  LSTLPYLSALPVLLTLPYLSVLPVLSTLPYLSLHPVLSILPYLS---LHPVLSILPYLSL 262

Query: 873 Q--------LLLHPLMT---LLVLHP-LDVLPEI 894
                    L LHP+++   LL LHP L  LP +
Sbjct: 263 HPVLSILPYLSLHPVLSTLPLLSLHPVLSTLPSL 364



 Score = 30.4 bits (67), Expect = 5.9
 Identities = 30/113 (26%), Positives = 50/113 (43%), Gaps = 9/113 (7%)
 Frame = +2

Query: 809 ILERSSYLDMLFFMNVFYHINPFPHLRVLIGNISLPFHPFLSFLLFLIS---------LI 859
           +L    YL +   +++  +++  P L +L     L  HP LS L +L           L 
Sbjct: 161 VLSTLPYLSLHPVLSILPYLSLHPVLSILP---YLSLHPVLSILPYLSLHPVLSTLPLLS 331

Query: 860 LHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*RIIFVLINHLH 912
           LH +L+    LSL  +L  L +L +L  L  LP +   L +  + F+ +   H
Sbjct: 332 LHPVLSTLPSLSLHPVLSTLPSLSLLPVLSTLPSLGPPLDLSTLPFLFLPPFH 490


>AW756455 weakly similar to SP|P46263|TBB1 Tubulin beta-1 chain. [Potato]
           {Solanum tuberosum}, partial (23%)
          Length = 319

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 15/35 (42%), Positives = 21/35 (59%)
 Frame = -1

Query: 345 CLLLFLLQINSPLHHPCLLFLISQVYKVLSHALFI 379
           C +  +  INS LH PC+  L SQ+Y  ++H L I
Sbjct: 262 CQVSTVRGINSTLHTPCIRHLFSQLYHSIAHILLI 158


>TC212543 weakly similar to UP|FKB7_WHEAT (Q43207) 70 kDa peptidylprolyl
           isomerase  (Peptidyl-prolyl cis-trans isomerase)
           (PPIase) (Rotamase) , partial (14%)
          Length = 561

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
 Frame = -1

Query: 487 INQMVSTHCLCSFLIRRCILIAVLSLYQIKW-------HIVLVLFLILVLLSLKLCLIVL 539
           I+  V+ H  C+  I   I + + SLY  +W       H+ + L +  V +SLKL   +L
Sbjct: 351 ISNFVNFHS-CNLFIFPLIFLYLQSLYSHRWVLCFTCKHVFI*LSIFFVTVSLKLLQFLL 175

Query: 540 EYLNL 544
            YLN+
Sbjct: 174 NYLNI 160


>AW756490 similar to SP|Q96453|143D 14-3-3-like protein D (SGF14D). [Soybean]
           {Glycine max}, partial (41%)
          Length = 340

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = -1

Query: 906 VLINHLHLSIT--CTL-FLIMFLIITSLIPTLISFCLFML 942
           VLINH H  IT  C L F +M +I+ +L   L+ FCLF L
Sbjct: 328 VLINHSHFIITDVCKLQFHLMRVILNALCILLVPFCLFQL 209


>CA784773 weakly similar to GP|27901698|gb gag-pol polyprotein {Vitis
            vinifera}, partial (34%)
          Length = 409

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 24/66 (36%), Positives = 32/66 (48%)
 Frame = +1

Query: 950  LRQTSLNVGGKLCKLSSLLLKILELGR*LIHLLMLNL*AVGGFTRLSIMQMTLLKDTRPD 1009
            +R   +  G KL  +   LLKI+ LG   + LL+  L*   GFT L +  M  L   R  
Sbjct: 34   VRHLIILAGDKLWLMKCRLLKIMVLGSLFLSLLVRRL*VADGFTLLKLGPMVRLIGLRLA 213

Query: 1010 LLLKAT 1015
              L+AT
Sbjct: 214  WSLRAT 231


>TC233882 
          Length = 697

 Score = 33.1 bits (74), Expect = 0.92
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +2

Query: 896 SLLLI*RIIFVLINHLHLSITCTLFLIMFLIITSLIPTLISFCLFMLI 943
           S +L  ++I+++ + +HL +   L+L  FL+ T+   T + FC F LI
Sbjct: 41  SFILTQKMIYLI*HSMHLIVPQLLYLSFFLLFTN*WLTQVPFCAFFLI 184


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.352    0.158    0.526 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,767,689
Number of Sequences: 63676
Number of extensions: 1392536
Number of successful extensions: 18911
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 13703
Number of HSP's successfully gapped in prelim test: 642
Number of HSP's that attempted gapping in prelim test: 3905
Number of HSP's gapped (non-prelim): 15908
length of query: 1454
length of database: 12,639,632
effective HSP length: 109
effective length of query: 1345
effective length of database: 5,698,948
effective search space: 7665085060
effective search space used: 7665085060
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (22.0 bits)
S2: 65 (29.6 bits)