TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148236.3 + phase: 0 /pseudo
         (116 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC222041 similar to UP|Q8LBQ6 (Q8LBQ6) Isp4-like protein, partia...   174  4e-45
TC222979 similar to UP|Q8H0V0 (Q8H0V0) Isp4 like protein, partia...    86  2e-18
CA853857 similar to PIR|H96681|H96 protein F1E22.10 [imported] -...    36  0.003
TC207802 similar to UP|Q6R3L0 (Q6R3L0) Metal-nicotianamine trans...    35  0.007
TC221285 similar to UP|Q6R3L0 (Q6R3L0) Metal-nicotianamine trans...    31  0.074
TC206604 similar to UP|Q9LSD4 (Q9LSD4) Gb|AAF23830.1, partial (37%)    31  0.097
TC206603 similar to UP|Q9LSD4 (Q9LSD4) Gb|AAF23830.1, partial (47%)    31  0.097
TC230790 similar to UP|Q9FJC8 (Q9FJC8) EspB-like protein, partia...    30  0.13
TC227250 similar to UP|Q9ZST7 (Q9ZST7) Asparagine synthetase , p...    28  0.82
TC227249 similar to UP|Q8LJT6 (Q8LJT6) Asparagine synthetase  , ...    28  0.82
BE609245 similar to GP|6682869|dbj| sigma factor {Nicotiana taba...    27  1.1
TC232182                                                               27  1.8
TC204585 similar to UP|Q9M611 (Q9M611) Soluble inorganic pyropho...    25  4.1
TC204586 homologue to UP|Q9LFF9 (Q9LFF9) Inorganic pyrophosphata...    25  4.1
AW597030 similar to SP|Q9LYT3|TT12 TRANSPARENT TESTA 12 protein....    25  4.1
TC209140 weakly similar to UP|Q948R9 (Q948R9) RPS6-like protein ...    25  5.3
TC214778 homologue to UP|Q40512 (Q40512) Photosystem I light-har...    25  6.9
TC216705                                                               25  6.9
TC216928 similar to UP|Q9SVA6 (Q9SVA6) GTP-binding-like protein,...    24  9.0
TC208899 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl...    24  9.0

>TC222041 similar to UP|Q8LBQ6 (Q8LBQ6) Isp4-like protein, partial (38%)
          Length = 1012

 Score =  174 bits (442), Expect = 4e-45
 Identities = 77/97 (79%), Positives = 92/97 (94%)
 Frame = +2

Query: 12  LALIFTLPVAIITATTNQTPGLNVITEYIMGVILPGRPIANVCFKTYGYMSMSQAISFLS 71
           LA  FTLP++IITATTNQTPGLN+ITEY+ G+I PGRPIANVCFKTYGY+SM+QA+SFLS
Sbjct: 2   LAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLS 181

Query: 72  DFKLGHYMKIPPRSMFIVQILGTLIAGTVDVGVAWWL 108
           DFKLGHYMKIPPRSMF+VQ +GT++AGT+++GVAWWL
Sbjct: 182 DFKLGHYMKIPPRSMFLVQFIGTILAGTINIGVAWWL 292


>TC222979 similar to UP|Q8H0V0 (Q8H0V0) Isp4 like protein, partial (30%)
          Length = 661

 Score = 86.3 bits (212), Expect = 2e-18
 Identities = 38/62 (61%), Positives = 47/62 (75%)
 Frame = +2

Query: 47  GRPIANVCFKTYGYMSMSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTVDVGVAW 106
           G+PIAN+ FK YG +S   A+SFLSD KLGHYMKIPPR M+  Q+ GTL AG  ++ VAW
Sbjct: 2   GKPIANLLFKIYGRISTVHALSFLSDLKLGHYMKIPPRCMYTAQLEGTLFAGVENLAVAW 181

Query: 107 WL 108
           W+
Sbjct: 182 WM 187


>CA853857 similar to PIR|H96681|H96 protein F1E22.10 [imported] - Arabidopsis
           thaliana, partial (24%)
          Length = 531

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 17/44 (38%), Positives = 23/44 (51%)
 Frame = -2

Query: 63  MSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTVDVGVAW 106
           +S A     DFK G+     PRSMF+ Q+LGT +   +   V W
Sbjct: 353 VSXASDLTQDFKTGYMTLASPRSMFLSQVLGTAMGCVISPCVFW 222


>TC207802 similar to UP|Q6R3L0 (Q6R3L0) Metal-nicotianamine transporter YSL1,
           partial (29%)
          Length = 1137

 Score = 34.7 bits (78), Expect = 0.007
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +1

Query: 63  MSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTVDVGVAWWL 108
           +S +   + DFK  HY +  PR+MFI Q++G +  G V   ++++L
Sbjct: 31  ISVSCILMQDFKTAHYTRTSPRAMFICQVIG-IAMGCVTAPLSFFL 165


>TC221285 similar to UP|Q6R3L0 (Q6R3L0) Metal-nicotianamine transporter YSL1,
           partial (32%)
          Length = 945

 Score = 31.2 bits (69), Expect = 0.074
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 63  MSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLI 96
           +S A   + DFK  +Y    P++MFI Q++GT +
Sbjct: 76  VSVACXLMLDFKTAYYTCTSPKAMFICQLVGTAL 177


>TC206604 similar to UP|Q9LSD4 (Q9LSD4) Gb|AAF23830.1, partial (37%)
          Length = 1091

 Score = 30.8 bits (68), Expect = 0.097
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +2

Query: 47  GRPIANVCFKTYGYMSMSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTVDVGVAW 106
           G  IA V         ++ A   + DFK G+      +SMF+ Q++GT + G V   + +
Sbjct: 143 GGVIAGVASCAVMMSIVATAADLMQDFKTGYLTLSSAKSMFVSQLIGTAM-GCVIAPLTF 319

Query: 107 WL 108
           W+
Sbjct: 320 WM 325


>TC206603 similar to UP|Q9LSD4 (Q9LSD4) Gb|AAF23830.1, partial (47%)
          Length = 1062

 Score = 30.8 bits (68), Expect = 0.097
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +1

Query: 47  GRPIANVCFKTYGYMSMSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTVDVGVAW 106
           G  IA V         ++ A   + DFK G+      +SMF+ Q++GT + G V   + +
Sbjct: 655 GGVIAGVAACAVMMSIVATAADLMQDFKTGYLTLSSAKSMFVSQLIGTAM-GCVIAPLTF 831

Query: 107 WL 108
           W+
Sbjct: 832 WM 837


>TC230790 similar to UP|Q9FJC8 (Q9FJC8) EspB-like protein, partial (32%)
          Length = 861

 Score = 30.4 bits (67), Expect = 0.13
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 63  MSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTV 100
           +S +   + DFK GH     PRSM + Q +GT I   V
Sbjct: 71  VSISSDLMHDFKTGHLTFTSPRSMLLSQAIGTAIGCVV 184


>TC227250 similar to UP|Q9ZST7 (Q9ZST7) Asparagine synthetase , partial (96%)
          Length = 1916

 Score = 27.7 bits (60), Expect = 0.82
 Identities = 15/49 (30%), Positives = 25/49 (50%)
 Frame = -2

Query: 52   NVCFKTYGYMSMSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTV 100
            N+CF  YG++S S A+          +  I PRS  I+   G+++  T+
Sbjct: 1381 NMCFGKYGFLSSSNALR-------NTHFSILPRSGLIIFHSGSILMATL 1256


>TC227249 similar to UP|Q8LJT6 (Q8LJT6) Asparagine synthetase  , partial
           (30%)
          Length = 745

 Score = 27.7 bits (60), Expect = 0.82
 Identities = 15/49 (30%), Positives = 25/49 (50%)
 Frame = -2

Query: 52  NVCFKTYGYMSMSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTV 100
           N+CF  YG++S S A+          +  I PRS  I+   G+++  T+
Sbjct: 195 NMCFGKYGFLSSSNALR-------NTHFSILPRSGLIIFHSGSILMATL 70


>BE609245 similar to GP|6682869|dbj| sigma factor {Nicotiana tabacum},
           partial (6%)
          Length = 375

 Score = 27.3 bits (59), Expect = 1.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 57  TYGYMSMSQAISFLSDFKLGHYMKIPPRSMFI 88
           +Y Y  + + +S+ SDF   HY  +P +S+ +
Sbjct: 276 SYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIV 371


>TC232182 
          Length = 682

 Score = 26.6 bits (57), Expect = 1.8
 Identities = 13/34 (38%), Positives = 17/34 (49%)
 Frame = -2

Query: 18  LPVAIITATTNQTPGLNVITEYIMGVILPGRPIA 51
           LP   I  T N  PG +  TEY +  ++P  P A
Sbjct: 366 LPSCYILNTGNHNPGNSF*TEYFVHTLIPHNPQA 265


>TC204585 similar to UP|Q9M611 (Q9M611) Soluble inorganic pyrophosphatase,
           partial (44%)
          Length = 523

 Score = 25.4 bits (54), Expect = 4.1
 Identities = 16/52 (30%), Positives = 25/52 (47%), Gaps = 13/52 (25%)
 Frame = -2

Query: 78  YMKIPPR---SMFI----------VQILGTLIAGTVDVGVAWWLPRFNKEHM 116
           Y+KI PR   +MF            ++ G LIAG +  G+ WW   + ++ M
Sbjct: 339 YLKIMPRVSSNMFPGNG*KNPLVKTRVWGVLIAGNLGWGLNWWSHFYTRQVM 184


>TC204586 homologue to UP|Q9LFF9 (Q9LFF9) Inorganic pyrophosphatase-like
           protein, partial (94%)
          Length = 1225

 Score = 25.4 bits (54), Expect = 4.1
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 13/48 (27%)
 Frame = -1

Query: 73  FKLGHYMKIPPR-------------SMFIVQILGTLIAGTVDVGVAWW 107
           +  G Y+KI PR              +   ++ G LIAG +  G+ WW
Sbjct: 346 WSFGSYLKIVPRVCSNVSPGNG*KNPLVKTRVWGLLIAGNLVWGLNWW 203


>AW597030 similar to SP|Q9LYT3|TT12 TRANSPARENT TESTA 12 protein. [Mouse-ear
           cress] {Arabidopsis thaliana}, partial (25%)
          Length = 401

 Score = 25.4 bits (54), Expect = 4.1
 Identities = 26/95 (27%), Positives = 42/95 (43%), Gaps = 4/95 (4%)
 Frame = +1

Query: 6   LIFASGLALIFTLPVAIITATTNQTPGLNVITEYIMGV--ILPGRPIANVCFKTYGYMSM 63
           LIF   L+ +FT    +I A +N TP L  I+ +  G+  IL G  I +       Y+++
Sbjct: 115 LIFRVSLSKLFTSDSDVIDAVSNLTP-LLAISVFFNGIQPILSGVAIGSGWQALVAYVNL 291

Query: 64  SQ--AISFLSDFKLGHYMKIPPRSMFIVQILGTLI 96
           +    +       LG    +    ++   ILG LI
Sbjct: 292 ASYYVVGLTVGCVLGFKTSLGVAGIWWGMILGVLI 396


>TC209140 weakly similar to UP|Q948R9 (Q948R9) RPS6-like protein
           (AT3g17170/K14A17_29), partial (59%)
          Length = 1111

 Score = 25.0 bits (53), Expect = 5.3
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -3

Query: 4   WALIFASGLALIFTLPVAIITATTNQTPGLNVITEYIMGVILPGRPIANVCFKTYGYMSM 63
           +A+I    + LIFT+PV II           +  ++ + +I        +C  T   M +
Sbjct: 854 FAIIAVIAILLIFTIPVIII-----------IFIKFFIIII--------ICICTQ-CMKL 735

Query: 64  SQAISFLSDFKLGHYMKIPPRSMFIVQ 90
            +  +  SD  +  Y K+P  S  +VQ
Sbjct: 734 RRRRAIFSDCLIPLYHKMPNNSFILVQ 654


>TC214778 homologue to UP|Q40512 (Q40512) Photosystem I light-harvesting
           chlorophyll a/b-binding protein, partial (84%)
          Length = 1202

 Score = 24.6 bits (52), Expect = 6.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 44  ILPGRPIANVCFKTYGYMSM 63
           ILP +  +N+CF +Y Y SM
Sbjct: 810 ILP*KKKSNICFNSYLYNSM 869


>TC216705 
          Length = 637

 Score = 24.6 bits (52), Expect = 6.9
 Identities = 15/52 (28%), Positives = 26/52 (49%)
 Frame = +3

Query: 54  CFKTYGYMSMSQAISFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTVDVGVA 105
           CF  +G++ +S     L      ++ K+P R +F+   LG L+  T + G A
Sbjct: 426 CFSPFGHLVISDLKQMLLVISWAYFRKMPFR-LFV--YLGILLITTKNTGAA 572


>TC216928 similar to UP|Q9SVA6 (Q9SVA6) GTP-binding-like protein, partial
           (25%)
          Length = 354

 Score = 24.3 bits (51), Expect = 9.0
 Identities = 9/21 (42%), Positives = 15/21 (70%)
 Frame = -2

Query: 3   WWALIFASGLALIFTLPVAII 23
           +W L  +S ++LIF + VAI+
Sbjct: 140 FWVLAISSSMSLIFCITVAIL 78


>TC208899 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance
          p-glycoprotein, partial (14%)
          Length = 983

 Score = 24.3 bits (51), Expect = 9.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 63 MSQAISFLSDFKLGHYMKIP 82
          ++ A+ FLSDF+L  +M +P
Sbjct: 76 LTSAMCFLSDFRLYDFMSMP 17


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.328    0.142    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,855,847
Number of Sequences: 63676
Number of extensions: 49391
Number of successful extensions: 343
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of query: 116
length of database: 12,639,632
effective HSP length: 92
effective length of query: 24
effective length of database: 6,781,440
effective search space: 162754560
effective search space used: 162754560
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 51 (24.3 bits)