TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148098.6 - phase: 0 
         (556 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC218904                                                               82  5e-16
TC227603 UP|Q6TXD0 (Q6TXD0) 3-ketoacyl-CoA thiolase  , complete        50  2e-06
TC212397 homologue to UP|Q6TXD0 (Q6TXD0) 3-ketoacyl-CoA thiolase...    49  4e-06
TC225396 similar to UP|P93112 (P93112) 3-ketoacyl-CoA thiolase p...    47  3e-05
TC225397 similar to UP|Q08375 (Q08375) Acetyl-CoA acyltransferas...    45  6e-05
BM890890 similar to SP|Q9LI83|ALA Potential phospholipid-transpo...    37  0.030
TC207072 similar to UP|Q8RXD3 (Q8RXD3) ABI3-interacting protein ...    33  0.44
TC208883 similar to GB|AAQ23057.1|33591100|AY344485 heat shock f...    32  0.74
BF009725 similar to SP|P98204|ALA Phospholipid-transporting ATPa...    31  1.7
TC206613 homologue to UP|O80378 (O80378) 181 (Fragment), partial...    31  1.7
TC225348 homologue to UP|KPPR_MESCR (P27774) Phosphoribulokinase...    30  2.8
TC219657 weakly similar to UP|AROK_ARATH (Q9SJ05) Probable shiki...    30  3.7
TC227535 similar to UP|Q84RR0 (Q84RR0) ARIADNE-like protein ARI7...    30  3.7
TC226143 similar to UP|O82200 (O82200) Expressed protein, partia...    29  6.3
TC217734                                                               29  6.3
TC209041 weakly similar to UP|Q9V780 (Q9V780) Lap1 protein, part...    29  6.3
AW349205                                                               29  6.3
TC229476 similar to UP|Q94G16 (Q94G16) HCF106, partial (67%)           28  8.2
BF070423 weakly similar to GP|19698965|gb ABI3-interacting prote...    28  8.2
TC227721 similar to UP|Q8H0N7 (Q8H0N7) TIR-NBS disease resistanc...    28  8.2

>TC218904 
          Length = 824

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 47/99 (47%), Positives = 62/99 (62%)
 Frame = +1

Query: 2   VSLSHKQTLIDDCVSLSYEIAVGTAFYCHCLKVLVGTALLDLKGALTHQLVTQIWKVQLR 61
           VSLS KQ LIDDC+  SYEIA+G A + +CL V   TAL +L+  L HQL T+  K+ LR
Sbjct: 193 VSLSDKQKLIDDCLRKSYEIALGNAEFGYCLAVNADTALSELRSELGHQLATKSQKMNLR 372

Query: 62  CIGSIPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIG 100
            IG++ Y V +L NDQ+L +S +  V   DT   +   G
Sbjct: 373 GIGAVVYNVPELENDQRLKISLRS-VENEDTTPISQEFG 486


>TC227603 UP|Q6TXD0 (Q6TXD0) 3-ketoacyl-CoA thiolase  , complete
          Length = 1770

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 24/44 (54%), Positives = 34/44 (76%)
 Frame = +3

Query: 134  AANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSL 177
            AA + LM+RR+ + +G PIL +F+SFA VGV  AVMGVGP+ ++
Sbjct: 996  AAAVLLMKRRVAVQKGLPILGIFRSFAAVGVDPAVMGVGPAVAI 1127


>TC212397 homologue to UP|Q6TXD0 (Q6TXD0) 3-ketoacyl-CoA thiolase  , partial
           (31%)
          Length = 684

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 23/42 (54%), Positives = 32/42 (75%)
 Frame = +1

Query: 136 NMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSL 177
           N  LM+RR+ + +G PIL +F+SFA VGV  AVMGVGP+ ++
Sbjct: 253 NELLMKRRVAVQKGLPILGIFRSFAAVGVDPAVMGVGPAVAI 378


>TC225396 similar to UP|P93112 (P93112) 3-ketoacyl-CoA thiolase precursor  ,
           partial (51%)
          Length = 897

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 21/44 (47%), Positives = 33/44 (74%)
 Frame = +3

Query: 134 AANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSL 177
           AA + LM+R + + +G PIL +F++FA VGV  A+MGVGP+ ++
Sbjct: 222 AAAVLLMKRSVALQKGLPILGVFRTFAAVGVDPAIMGVGPAAAI 353


>TC225397 similar to UP|Q08375 (Q08375) Acetyl-CoA acyltransferase
            (3-ketoacyl-coa thiolase)  , complete
          Length = 1697

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 20/44 (45%), Positives = 33/44 (74%)
 Frame = +2

Query: 134  AANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSL 177
            A+ + LM+R + + +G PIL +F++FA VGV  A+MGVGP+ ++
Sbjct: 986  ASAVLLMKRSVALQKGLPILGVFRTFAAVGVDPAIMGVGPAAAI 1117


>BM890890 similar to SP|Q9LI83|ALA Potential phospholipid-transporting ATPase
           10 (EC 3.6.3.1) (Aminophospholipid flippase 10).,
           partial (10%)
          Length = 425

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 32/101 (31%), Positives = 47/101 (45%), Gaps = 4/101 (3%)
 Frame = +1

Query: 103 CSLLGPGMHYIIICSTTPQIIFLKEVEDMSTAANMCLMQRRMTIDRGSPIL----EMFKS 158
           CSLL  GM  III S TP+   L++VED S AA    +     +  G  +L    E  ++
Sbjct: 7   CSLLRQGMKQIIISSDTPETKSLEKVEDKSAAAAAVKVSVIHQLTNGKELLAESDENSEA 186

Query: 159 FAIVGVAHAVMGVGPSKSLESFYEILDRLPILFNCVSAPCC 199
            A++     + G   + +LE   + L  L +   C S  CC
Sbjct: 187 LALI-----IDGKSLTYALEDDVKDL-FLTLAAGCASVICC 291


>TC207072 similar to UP|Q8RXD3 (Q8RXD3) ABI3-interacting protein 2, partial
           (79%)
          Length = 1208

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 23/50 (46%), Positives = 27/50 (54%)
 Frame = +2

Query: 446 TMLKLTAYTAQSFLASKLGLSAVLHLIVKGLQSRLQHTKAAIKLARCQLH 495
           T+LK T YTA  F  + LGL    HL+V    S  +H KA I  AR  LH
Sbjct: 302 TVLK-TRYTAPGFWNAGLGLFEQAHLLVSD-PSEKEHLKACIAQAREHLH 445


>TC208883 similar to GB|AAQ23057.1|33591100|AY344485 heat shock factor RHSF3
           {Oryza sativa (japonica cultivar-group);} , partial
           (24%)
          Length = 1348

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 186 RLPILFNCVSAPCCLALNFMANEIIIFLS 214
           R P  FN +S PCC  LN  ++ I  FLS
Sbjct: 216 RCPTFFNWLSVPCCFCLNLTSSCIRTFLS 130


>BF009725 similar to SP|P98204|ALA Phospholipid-transporting ATPase 1 (EC
           3.6.3.1) (Aminophospholipid flippase 1). [Mouse-ear
           cress], partial (10%)
          Length = 400

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/32 (46%), Positives = 18/32 (55%)
 Frame = +2

Query: 84  KPWVFTSDTMETTLNIGSTCSLLGPGMHYIII 115
           K WV T D  ET ++IG +  LL   M  III
Sbjct: 305 KVWVLTGDKQETAISIGYSSKLLTSNMTQIII 400


>TC206613 homologue to UP|O80378 (O80378) 181 (Fragment), partial (90%)
          Length = 1667

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 17/37 (45%), Positives = 20/37 (53%), Gaps = 1/37 (2%)
 Frame = -3

Query: 172 GPSKSLESFYEILDRLPILFNCVSAPCC-LALNFMAN 207
           G  K L S Y  L  LP+L  C   PCC L L+F+ N
Sbjct: 525 GSIKLLMSLYMCLVNLPLLVACHLQPCCTLLLHFLIN 415


>TC225348 homologue to UP|KPPR_MESCR (P27774) Phosphoribulokinase, chloroplast
            precursor  (Phosphopentokinase) (PRKASE) (PRK) , partial
            (91%)
          Length = 1776

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/68 (27%), Positives = 31/68 (44%)
 Frame = -2

Query: 426  YCISGGNSFEFPFMFTHWSLTMLKLTAYTAQSFLASKLGLSAVLHLIVKGLQSRLQHTKA 485
            Y I  G S +F    +HWSL++         S+L +  GL     ++  G  S LQH  +
Sbjct: 1475 YIIMAG-SIQFLSFCSHWSLSLGGY*LLI*ISYLQTNYGLEETCSIVAAGEISMLQHLLS 1299

Query: 486  AIKLARCQ 493
             + +  C+
Sbjct: 1298 NLSIELCR 1275


>TC219657 weakly similar to UP|AROK_ARATH (Q9SJ05) Probable shikimate kinase,
           chloroplast precursor  , partial (56%)
          Length = 864

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 13/35 (37%), Positives = 21/35 (59%), Gaps = 3/35 (8%)
 Frame = +3

Query: 193 CVSAPCCLALNFMANEIII---FLSNVATNDLVPG 224
           C+S PCC+ L F+  E+++    + N+ T  LV G
Sbjct: 147 CISYPCCIDLLFLLVEVLL*GPSIGNICTRGLVFG 251


>TC227535 similar to UP|Q84RR0 (Q84RR0) ARIADNE-like protein ARI7, partial
           (54%)
          Length = 1486

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
 Frame = -3

Query: 391 ASSQIDTL-----EFSHFQIIVPL-EVDSLNSQIFLTLYHGYCISGGNSFEFPFMFTHWS 444
           A +Q DT+     ++  F   V L E+ +L    + T ++  CIS  NS  FPF F +  
Sbjct: 530 AVTQADTVCH*ASQYEQFASAVDLQELFALKIDCWPTAHNNVCISPANSLPFPFFFQYHH 351

Query: 445 LTML 448
             +L
Sbjct: 350 TLLL 339


>TC226143 similar to UP|O82200 (O82200) Expressed protein, partial (84%)
          Length = 1560

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 482  HTKAAIKLARCQLHCVS-SWDHLGVIFSMIESNDSWLGLLHLYMLQFSKIQATH 534
            +TK  I   RC L+ V  SW H   ++ + + ND+ L    L+++++    A H
Sbjct: 974  NTKYGIYSERCGLNNVMMSWGHDDYMYLVAKENDTTLPSAALFIIRYHSFYALH 1135


>TC217734 
          Length = 1229

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/28 (46%), Positives = 18/28 (63%)
 Frame = +3

Query: 519 LLHLYMLQFSKIQATHATKLAHHHVYSS 546
           L H  MLQ S +Q T +++L HH+ Y S
Sbjct: 870 LQHYQMLQNSFLQTTFSSQLEHHNQYES 953


>TC209041 weakly similar to UP|Q9V780 (Q9V780) Lap1 protein, partial (4%)
          Length = 1041

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 24/97 (24%), Positives = 43/97 (43%)
 Frame = +1

Query: 40  LLDLKGALTHQLVTQIWKVQLRCIGSIPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNI 99
           L+ L  + +H    +I   +L C+ S+P  +  L N + LN+S       S       ++
Sbjct: 319 LVFLPRSTSHLTALRILDARLNCLRSLPEDLENLINLETLNVSQNFQYLDS----LPYSV 486

Query: 100 GSTCSLLGPGMHYIIICSTTPQIIFLKEVEDMSTAAN 136
           G   SL+   + Y  I +    I  LK+++ +S   N
Sbjct: 487 GFLLSLVELDVSYNKIRALPDSIGCLKKLQKISVEGN 597


>AW349205 
          Length = 610

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 11/38 (28%), Positives = 23/38 (59%)
 Frame = +1

Query: 235 IMKVELKELCELIDTFSKLYVKLSLIAYFAFEVAWYKN 272
           I K+  K+LC +I+ F+K+Y+ + +  Y+     ++ N
Sbjct: 217 IYKIM*KKLCTVIEIFNKMYIHI*IFYYYIKYKVYFSN 330


>TC229476 similar to UP|Q94G16 (Q94G16) HCF106, partial (67%)
          Length = 1031

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 476 LQSRLQHTKAAIKLARCQLHCVSSWDHLGVIFSM 509
           +Q  +Q +K  I L +C LH V ++ HLGV+ S+
Sbjct: 66  VQCHIQSSKLFISL-QCSLHWVEAFSHLGVV*SI 164


>BF070423 weakly similar to GP|19698965|gb ABI3-interacting protein 2
           {Arabidopsis thaliana}, partial (33%)
          Length = 424

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/50 (44%), Positives = 26/50 (52%)
 Frame = +3

Query: 446 TMLKLTAYTAQSFLASKLGLSAVLHLIVKGLQSRLQHTKAAIKLARCQLH 495
           T+LK T YTA  F  + LGL    HL+V    S  +  KA I  AR  LH
Sbjct: 270 TVLK-TRYTAPGFWNAGLGLFEQAHLLVSE-PSEKEKLKACIAHAREHLH 413


>TC227721 similar to UP|Q8H0N7 (Q8H0N7) TIR-NBS disease resistance protein,
           partial (19%)
          Length = 1015

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/63 (34%), Positives = 30/63 (46%), Gaps = 2/63 (3%)
 Frame = +3

Query: 195 SAPCCLALNFMANEIIIFLSNVATNDLVPGHLVYNDTMTLIMKVELKELCEL--IDTFSK 252
           S P C  +  +   IIIFL NV  N L+   ++      +      K LC L  I+TF K
Sbjct: 768 SLPTCFHIWRIQTIIIIFLCNVQRN*LLLSQVLMRYDFLI-----SKSLCSLFCIETFWK 932

Query: 253 LYV 255
           +YV
Sbjct: 933 IYV 941


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.326    0.137    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,469,678
Number of Sequences: 63676
Number of extensions: 459854
Number of successful extensions: 3304
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3302
length of query: 556
length of database: 12,639,632
effective HSP length: 102
effective length of query: 454
effective length of database: 6,144,680
effective search space: 2789684720
effective search space used: 2789684720
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)