TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147961.4 - phase: 0 
         (266 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC215840 homologue to UP|Q41122 (Q41122) Proline-rich protein pr...    29  2.5
CO984719                                                               28  5.6
CO980654                                                               28  5.6

>TC215840 homologue to UP|Q41122 (Q41122) Proline-rich protein precursor,
           partial (74%)
          Length = 1171

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 222 CHVEEGITKTIICGIILDDGSTCRRQPVKGRKRCQEHKGRRIRAN 266
           C  +EG+  +I+ G+ +++   C +   KG  R      RR+  N
Sbjct: 643 CGSQEGVNPSILAGLNINNSLNCDKASRKGVNRNNRRFNRRVNRN 509


>CO984719 
          Length = 839

 Score = 27.7 bits (60), Expect = 5.6
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +3

Query: 149 KICGVMLTDGSICKRPPVEKRVRCPEHKGMR 179
           K+  + + DG++C R  +  ++RC  H G++
Sbjct: 153 KVYVISVFDGTVCSRIFISNKLRCRAHTGVK 245


>CO980654 
          Length = 844

 Score = 27.7 bits (60), Expect = 5.6
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 149 KICGVMLTDGSICKRPPVEKRVRCPEHKGMR 179
           K+  + + DG++C R  +  ++RC  H G++
Sbjct: 200 KVYVISVFDGTVCSRIFISNKLRCRAHTGVK 292


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.318    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,961,682
Number of Sequences: 63676
Number of extensions: 135765
Number of successful extensions: 607
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of query: 266
length of database: 12,639,632
effective HSP length: 96
effective length of query: 170
effective length of database: 6,526,736
effective search space: 1109545120
effective search space used: 1109545120
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)