TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147960.7 + phase: 0 
         (248 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC235043                                                               97  7e-21
TC206403 similar to UP|SDF2_ARATH (Q93ZE8) Stromal cell-derived ...    27  6.6
TC217787 weakly similar to UP|Q76EK9 (Q76EK9) Steroid 5alpha-red...    27  6.6
TC209870 homologue to UP|Q7Y0W7 (Q7Y0W7) NADP-specific isocitrat...    27  6.6
BI315805 homologue to PIR|PN0477|PN0 1-aminocyclopropane-1-carbo...    27  8.6
AI900296 weakly similar to GP|18700084|gb At2g46620/F13A10.15 {A...    27  8.6
TC230262 weakly similar to UP|Q6J1J8 (Q6J1J8) Oleosin isoform, p...    27  8.6
TC228519 weakly similar to UP|Q9VYS6 (Q9VYS6) CG1840-PA (LD12750...    27  8.6
TC213125                                                               27  8.6

>TC235043 
          Length = 398

 Score = 97.1 bits (240), Expect = 7e-21
 Identities = 43/60 (71%), Positives = 53/60 (87%)
 Frame = +1

Query: 189 MGDLKTKGKDVVEPQLENIKNYFVPMKVWAENMSRKWHLEREDVKQKAIVKDLSKILGSK 248
           +G ++ +GKD VEPQLENIK  FVP+K+WAENMSRKWH+ER+DVKQK IVK+LSKI G+K
Sbjct: 10  LGRIRHEGKDYVEPQLENIKERFVPLKIWAENMSRKWHMERDDVKQKTIVKELSKIWGAK 189


>TC206403 similar to UP|SDF2_ARATH (Q93ZE8) Stromal cell-derived factor
           2-like protein precursor (SDF2-like protein), partial
           (88%)
          Length = 1148

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 65  LFRDETASSSSFSASKWVLQSDPKLRSSVSPDAINPL 101
           +FR  + + SS  +S W+  S P L SS S   +  L
Sbjct: 216 IFRSGSRTGSSHCSSSWLSDSSPSLSSSSSLSTLTSL 326


>TC217787 weakly similar to UP|Q76EK9 (Q76EK9) Steroid 5alpha-reductase,
           partial (77%)
          Length = 930

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 16/51 (31%), Positives = 23/51 (44%)
 Frame = -1

Query: 95  PDAINPLRAFVSLPQVTFGARRWELPEAKHGVSASTANELRQDRYDVNVNP 145
           P    P     +LP+V       E P A+H V+ S A E +Q+     +NP
Sbjct: 651 PSHHGPAEPLDNLPKVIRTRHELEQPTARHHVALSLALEPQQNPISPYINP 499


>TC209870 homologue to UP|Q7Y0W7 (Q7Y0W7) NADP-specific isocitrate
            dehydrogenase  , partial (68%)
          Length = 1418

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 207  IKNYFVPMKVWAENMSRKWHLER 229
            +KNY + +K+W  ++ R+W+ ER
Sbjct: 1052 MKNYGILLKIWRLHVLRQWNQER 1120


>BI315805 homologue to PIR|PN0477|PN0 1-aminocyclopropane-1-carboxylate
           synthase (EC 4.4.1.14) 5 - mung bean (fragment), partial
           (34%)
          Length = 408

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 17/74 (22%), Positives = 34/74 (44%)
 Frame = +1

Query: 12  EAAYFFQESKQAVTKLAQKNNPISKTNVVDQRHVVQDNADVLPEVLRHSLPSKLFRDETA 71
           EAAY   E+  +  +     NP +   V   R V+++  D +     H +  +++     
Sbjct: 67  EAAYKDAEAMNSKVRGVLITNPSNPLGVTIPRSVLEEILDFVTRKNIHLVSDEIYSGSVF 246

Query: 72  SSSSFSASKWVLQS 85
           SSS F++   +L++
Sbjct: 247 SSSEFTSVAEILEA 288


>AI900296 weakly similar to GP|18700084|gb At2g46620/F13A10.15 {Arabidopsis
           thaliana}, partial (23%)
          Length = 420

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 160 KAFAIATAVVF-GGAAMVIGMVASKLELHNMGDLKTKGKDVVEPQLENIKNYFVPMKVWA 218
           K  A+ + V F G    V+ +      L ++ DL+ KG  +VEP+    +   +   VWA
Sbjct: 380 KQVALPSLVDFVGDGVNVLKVRTEDSPLVHLSDLEKKGSGLVEPEECGSEKMVLDSLVWA 201

Query: 219 E 219
           E
Sbjct: 200 E 198


>TC230262 weakly similar to UP|Q6J1J8 (Q6J1J8) Oleosin isoform, partial (47%)
          Length = 716

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -1

Query: 52  VLPEVLRHSLPSKLFRDETASSSSFSASKWVLQSDPKLRSSVSPDAINP 100
           +LP VLRH     L     A SSS S+      S P  R++ +P A  P
Sbjct: 440 LLPHVLRHVRYVPLSLAPAAPSSSSSSVASAGDSSPPTRTTRAPPACTP 294


>TC228519 weakly similar to UP|Q9VYS6 (Q9VYS6) CG1840-PA (LD12750p), partial
           (23%)
          Length = 438

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 58  RHSLPSKLFRDETASSSSFSASKWVLQSDP 87
           R S+PS   R  + SSS +S+S W   S P
Sbjct: 152 RRSVPSTSRRRSSTSSSRYSSSSWASSSWP 241


>TC213125 
          Length = 442

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -1

Query: 200 VEPQLENIKNYFVPMK 215
           ++P++ENIKNYF+  K
Sbjct: 322 IDPRMENIKNYFLSSK 275


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.314    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,095,294
Number of Sequences: 63676
Number of extensions: 108782
Number of successful extensions: 452
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of query: 248
length of database: 12,639,632
effective HSP length: 95
effective length of query: 153
effective length of database: 6,590,412
effective search space: 1008333036
effective search space used: 1008333036
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)