TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147959.10 + phase: 1 /pseudo
         (378 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC219638                                                              195  2e-50
TC234941                                                               97  6e-30
TC220818                                                               37  0.015
BE803356                                                               31  1.0
TC225767 similar to UP|Q8W590 (Q8W590) At2g32080/F22D22.17, part...    28  5.2
TC224802 similar to UP|O24320 (O24320) Lipoxygenase  , partial (...    28  5.2
TC213687                                                               28  8.9

>TC219638 
          Length = 968

 Score =  195 bits (496), Expect = 2e-50
 Identities = 94/153 (61%), Positives = 121/153 (78%), Gaps = 1/153 (0%)
 Frame = +2

Query: 1   DGRRVQDFFLSMEVAIRNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAASPEDAKID 60
           D   VQ F   ME   R HPLWA  +EE+++ A EGLEKY+MTKLF+R FA+ P+D K D
Sbjct: 182 DSAAVQAFLAKMEADFRAHPLWAGCSEEELESAGEGLEKYVMTKLFARVFASLPDDVKFD 361

Query: 61  HEISEKISLLQTFLKPEHLDIPPVLHNEASWLLAEKELQKINAFKAPQEKLSTIMNCCRV 120
            ++SEK++L+Q F++PE+LDI PV  NE+SWLLA+KELQKIN +KAP++KL  I+NCCRV
Sbjct: 362 DQLSEKMALIQQFIRPENLDIKPVFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCRV 541

Query: 121 INNLLLNAAM-SEYVPAGADDFIPVLIYVTIKA 152
           I+NLLLNA++ S   P GAD+F+PVLIYVTIKA
Sbjct: 542 ISNLLLNASVASRENPPGADEFLPVLIYVTIKA 640


>TC234941 
          Length = 811

 Score = 97.1 bits (240), Expect(2) = 6e-30
 Identities = 46/69 (66%), Positives = 58/69 (83%)
 Frame = +2

Query: 290 VLQHGTNYPYMEAESKDLAMEDVDILLNHYKDLVAKYTIICKAINYLSMSEKEPLLHQLE 349
           VL HG+NYPYMEA+SK+L + DVD+LL+ YKDLVAKYTI+CKAI  LS +E+EPLL  LE
Sbjct: 131 VLLHGSNYPYMEAKSKELTVGDVDMLLSDYKDLVAKYTILCKAIGCLSTAEREPLLRHLE 310

Query: 350 MQGEGSMLS 358
           MQG  ++L+
Sbjct: 311 MQGPETLLN 337



 Score = 52.0 bits (123), Expect(2) = 6e-30
 Identities = 26/41 (63%), Positives = 30/41 (72%)
 Frame = +3

Query: 209 ACKQPNWPRKSQVNYTLHVKLNKK*RTRAMFQTKCITNLIL 249
           ACKQP+ P KSQVNY LHVK   K RT A+ Q KC TNL++
Sbjct: 3   ACKQPS*PIKSQVNYPLHVK*ASKRRTIAVVQRKCTTNLMI 125


>TC220818 
          Length = 816

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 17/37 (45%), Positives = 24/37 (63%)
 Frame = +2

Query: 297 YPYMEAESKDLAMEDVDILLNHYKDLVAKYTIICKAI 333
           +PY+ A   DL + DV+ LLN+YK LV KY  + K +
Sbjct: 176 FPYLFASVGDLMVGDVEDLLNNYKQLVFKYVSLSKGL 286


>BE803356 
          Length = 559

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
 Frame = -2

Query: 22  WATATEEDIDC-----AMEGLEKYIMTKLFSRTFAASPEDAKIDHEISEKISLLQTFLKP 76
           W T  E DIDC     +  G        L +R   AS    K++H  SE+ SL   F++ 
Sbjct: 261 WLTVLESDIDCSPLM*SFVGSRHSSGMVLKARMLCASTASLKLEHFTSEERSL*PVFIRR 82

Query: 77  EHLDIPPVLHNEAS 90
            +   P   H  A+
Sbjct: 81  GNFW*PAPWHGHAT 40


>TC225767 similar to UP|Q8W590 (Q8W590) At2g32080/F22D22.17, partial (93%)
          Length = 1586

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 13/45 (28%), Positives = 26/45 (56%)
 Frame = -2

Query: 213 PNWPRKSQVNYTLHVKLNKK*RTRAMFQTKCITNLILETK*TILG 257
           PN+  + Q+N  +H++L +  R   M + +  TN+I ++  T+ G
Sbjct: 946 PNFILRRQINRPVHIQLRRSGRLSTMTRYEASTNIIRKSNKTL*G 812


>TC224802 similar to UP|O24320 (O24320) Lipoxygenase  , partial (73%)
          Length = 2213

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = -2

Query: 91   WLLAEKELQKINAFKAPQEKLSTIMNC--CRVI-NNLLLNAAMSEYVPAGADDFIPVLIY 147
            WL+ +  + ++N+F  P  +L   +NC  C VI  +++LN  ++      + + I V++Y
Sbjct: 1396 WLVFQVTVTRLNSFLPPSLELRVFLNCIICWVIQGDIVLNPCLNSIPYF*SINSIRVVLY 1217

Query: 148  VTIKA 152
               KA
Sbjct: 1216 HKAKA 1202


>TC213687 
          Length = 433

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 14/19 (73%), Positives = 16/19 (83%)
 Frame = +2

Query: 58  KIDHEISEKISLLQTFLKP 76
           +I +E SEKISLL TFLKP
Sbjct: 197 QIVNETSEKISLL*TFLKP 253


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.328    0.139    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,292,107
Number of Sequences: 63676
Number of extensions: 209903
Number of successful extensions: 1259
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of query: 378
length of database: 12,639,632
effective HSP length: 99
effective length of query: 279
effective length of database: 6,335,708
effective search space: 1767662532
effective search space used: 1767662532
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)