TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147714.3 - phase: 0 /pseudo
         (1586 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CF922488                                                              329  7e-90
NP334778 reverse transcriptase [Glycine max]                          221  3e-57
NP595172 polyprotein [Glycine max]                                    215  1e-55
TC233837 similar to UP|Q6WAY3 (Q6WAY3) Gag/pol polyprotein, part...   206  9e-53
NP395547 reverse transcriptase [Glycine max]                          183  6e-46
NP395548 reverse transcriptase [Glycine max]                          174  2e-43
TC219643 weakly similar to UP|Q6WAY7 (Q6WAY7) Gag/pol polyprotei...   166  8e-41
BQ628592                                                              100  3e-38
BG839293                                                              112  1e-24
TC223727 similar to UP|Q6WAY3 (Q6WAY3) Gag/pol polyprotein, part...   107  3e-23
TC211067 similar to UP|Q9LQH2 (Q9LQH2) F15O4.13, partial (9%)          53  9e-12
TC224482 similar to UP|Q6WAY3 (Q6WAY3) Gag/pol polyprotein, part...    70  1e-11
AW570005                                                               65  2e-10
BI317507                                                               65  2e-10
BE802896                                                               59  1e-08
BG725601 similar to PIR|H86337|H86 protein F5M15.26 [imported] -...    59  2e-08
AW184779                                                               47  5e-05
BI498328                                                               39  0.014
BI785135                                                               39  0.024
BE804087                                                               37  0.069

>CF922488 
          Length = 741

 Score =  329 bits (843), Expect = 7e-90
 Identities = 165/246 (67%), Positives = 192/246 (77%)
 Frame = +3

Query: 589 VPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSP 648
           V K+DGKV MCVD+RDLN ASPKD FPLPHI+VLVDNT     FSFMDGFSGYNQIK++P
Sbjct: 3   VLKEDGKV*MCVDYRDLN*ASPKDKFPLPHINVLVDNTTSFSQFSFMDGFSGYNQIKIAP 182

Query: 649 EDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSKD 708
           ED EKT+FIT WGTFCYK M FGL N GATYQR M  LF DM+HKE+EVY+DDMIVKS+ 
Sbjct: 183 EDMEKTTFITLWGTFCYKAMSFGLKNVGATYQRAMVALF*DMMHKEIEVYMDDMIVKSRT 362

Query: 709 EEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMP 768
           EE+H+  L K+F RLRKY+LRLNP KC F V+S KLL FI S +GIEVD +KV+ I EM 
Sbjct: 363 EEEHLVNLRKLFRRLRKYRLRLNPAKCMFEVKSRKLLDFIDS*RGIEVDSNKVKVILEMA 542

Query: 769 APQTEKQVRGFLRRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQGAFDSIKNYLL 828
            P TEKQV+GFL RLNYI RFIS + ATC P+F LL KNQ + W+ +C  AF+ IK  L+
Sbjct: 543 KPHTEKQVQGFLGRLNYIVRFIS*LIATCEPLFILLCKNQFVKWDHDC*VAFERIKQCLI 722

Query: 829 EPPILV 834
            P +LV
Sbjct: 723 NPHVLV 740


>NP334778 reverse transcriptase [Glycine max]
          Length = 431

 Score =  221 bits (562), Expect = 3e-57
 Identities = 101/143 (70%), Positives = 118/143 (81%)
 Frame = +3

Query: 597 RMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSF 656
           RMCVD+RDLN+ASPKDNFPLPHID+L+ N A   +FSFMDGFSGYNQIKM+PED EKT+F
Sbjct: 3   RMCVDYRDLNRASPKDNFPLPHIDILMANMASFALFSFMDGFSGYNQIKMAPEDMEKTTF 182

Query: 657 ITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSKDEEQHVEYL 716
           IT WGTFCYKVM FGL N GATY R M  LF DM+HKE+E YVD+MI KS+ EE+H+  L
Sbjct: 183 ITLWGTFCYKVMSFGLKNFGATYHRAMVALFQDMMHKEIEAYVDEMIAKSRMEEEHLVNL 362

Query: 717 TKMFERLRKYKLRLNPNKCTFGV 739
             +F +LRKY+LRLNP KC FG+
Sbjct: 363 QNLFGQLRKYRLRLNPRKCVFGL 431


>NP595172 polyprotein [Glycine max]
          Length = 4659

 Score =  215 bits (547), Expect = 1e-55
 Identities = 130/375 (34%), Positives = 197/375 (51%)
 Frame = +1

Query: 534  EHRIPTKPECPPVRQKLRRTHPDMALKIKSEV*KQIDAGFLMTIEYPEWVANIVPVPKKD 593
            +H IP K    PV+ +  R       +I+  + + +  G +     P +   I+ V KKD
Sbjct: 1756 DHAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSP-FSLPILLVKKKD 1932

Query: 594  GKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREK 653
            G  R C D+R LN  + KD+FP+P +D L+D    ++ FS +D  SGY+QI + PEDREK
Sbjct: 1933 GSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREK 2112

Query: 654  TSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSKDEEQHV 713
            T+F T  G + + VMPFGL NA AT+Q  M  +F   + K V V+ DD+++ S   + H+
Sbjct: 2113 TAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHL 2292

Query: 714  EYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTE 773
            ++L  + + L++++L    +KC+FG      LG  VS  G+ ++  KV+A+ + P P   
Sbjct: 2293 KHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWPTPNNV 2472

Query: 774  KQVRGFLRRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQGAFDSIKNYLLEPPIL 833
            KQ+RGFL    Y  RFI       GP+  LL+K+   +WN+E + AF  +K  + E P+L
Sbjct: 2473 KQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDS-FLWNNEAEAAFVKLKKAMTEAPVL 2649

Query: 834  VPPMEGKPLIMYLSVFDESVGCVLGQQDETGKKEHAIYYLSKKFTDCETRYMMLEKTCCA 893
              P   +P I+        VG VLGQ        H I Y SKK      +     +   A
Sbjct: 2650 SLPDFSQPFILETDASGIGVGAVLGQNG------HPIAYFSKKLAPRMQKQSAYTRELLA 2811

Query: 894  PAWAAKRLRHYLVNH 908
               A  + RHYL+ +
Sbjct: 2812 ITEALSKFRHYLLGN 2856


>TC233837 similar to UP|Q6WAY3 (Q6WAY3) Gag/pol polyprotein, partial (6%)
          Length = 402

 Score =  206 bits (523), Expect = 9e-53
 Identities = 96/133 (72%), Positives = 114/133 (85%)
 Frame = +2

Query: 632 FSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMI 691
           FSFMDGFSGYNQI M+ ED EKT+F+T WGTF Y+VM FGL N GATYQR M  LFHDM+
Sbjct: 2   FSFMDGFSGYNQI*MAREDVEKTTFVTLWGTFSYRVMAFGLKNTGATYQRAMVALFHDMM 181

Query: 692 HKEVEVYVDDMIVKSKDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQ 751
           HKE+EVYVDDMI KS+ E +H+  L K+F RL+KY+L+LNP KCTFGV+SGKLLGFIVSQ
Sbjct: 182 HKEIEVYVDDMIAKSRTETEHLVNLCKLFGRLQKYQLKLNPTKCTFGVKSGKLLGFIVSQ 361

Query: 752 KGIEVDPDKVRAI 764
           KGIE+DP+KV+A+
Sbjct: 362 KGIEIDPEKVKAL 400


>NP395547 reverse transcriptase [Glycine max]
          Length = 762

 Score =  183 bits (464), Expect = 6e-46
 Identities = 95/252 (37%), Positives = 142/252 (55%), Gaps = 18/252 (7%)
 Frame = +1

Query: 561 IKSEV*KQIDAGFLMTIEYPEWVANIVPVPKKDGKV------------------RMCVDF 602
           ++ EV K ++AG +  I    WV+ +  VPKK G                    RMC+D+
Sbjct: 1   VRKEVFKLLEAGLIYPISDSSWVSPVQVVPKKGGMTVVKNDRNELIPTRRVTRWRMCIDY 180

Query: 603 RDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGT 662
           R LN+A+ KD++PLP +D ++   A+   + F+DG+SGYNQI + P+D+EKT+F  P+  
Sbjct: 181 RKLNEATRKDHYPLPFMDQMLKRLARQSFYRFLDGYSGYNQIAVDPQDQEKTAFTCPFSV 360

Query: 663 FCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSKDEEQHVEYLTKMFER 722
           F Y+ MPFGL NA  T+QR M  +F DM+ K +EV++DD           +  L K+ +R
Sbjct: 361 FAYRRMPFGLCNASTTFQRCMMAIFDDMVEKCIEVFMDDFSFFGASFGNCLANLEKVLQR 540

Query: 723 LRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLRR 782
             K  L LN  KC F V+ G +LG  +S++GIEV  +K+  I ++P P   K +  FL  
Sbjct: 541 CEKSNLVLNWEKCHFMVQEGIVLGHKISKRGIEVVKEKLDVIDKLPPPVNVKGIHSFLGH 720

Query: 783 LNYISRFISHMT 794
           + +  RFI   T
Sbjct: 721 VGFYRRFIKDFT 756


>NP395548 reverse transcriptase [Glycine max]
          Length = 762

 Score =  174 bits (442), Expect = 2e-43
 Identities = 90/252 (35%), Positives = 141/252 (55%), Gaps = 18/252 (7%)
 Frame = +1

Query: 561 IKSEV*KQIDAGFLMTIEYPEWVANIVPVPKKDGKV------------------RMCVDF 602
           ++ EV K ++ G +  I    WV+ ++ V KK+G                    ++C+D+
Sbjct: 1   VRKEVLKLLEVGLIYPISDSAWVSPVLVVSKKEGMTVIRNEKNDLIPTRTVTSWKLCIDY 180

Query: 603 RDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGT 662
           R LN+A+ KD+FPLP +D +++  A    + F+D + GYNQI + P+D+EK +F  P+G 
Sbjct: 181 RKLNEATRKDHFPLPFMDQMLERLAGHAYYCFLDAYFGYNQIVVDPKDQEKMAFTCPFGV 360

Query: 663 FCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSKDEEQHVEYLTKMFER 722
           F Y+ +PFGL NA  T+Q  M  +F D++ K +EV++DD  V     E  ++ L  + +R
Sbjct: 361 FAYRRIPFGLCNAPTTFQMCMLAIFADIVEKSIEVFMDDFSVFVPSLESCLKKLEMVLQR 540

Query: 723 LRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLRR 782
             +  L LN  KC F VR G +LG  +S +GIEVD  K+  I ++P P   K +R FL +
Sbjct: 541 CVETNLVLNWEKCHFMVREGIVLGHKISTRGIEVDQTKIDVIEKLPPPSNVKGIRSFLGQ 720

Query: 783 LNYISRFISHMT 794
             +  RFI   T
Sbjct: 721 ARFYRRFIKDFT 756


>TC219643 weakly similar to UP|Q6WAY7 (Q6WAY7) Gag/pol polyprotein
           (Fragment), partial (8%)
          Length = 1320

 Score =  166 bits (420), Expect = 8e-41
 Identities = 80/169 (47%), Positives = 111/169 (65%), Gaps = 2/169 (1%)
 Frame = +3

Query: 424 RLSHSKPVGHSNPTFPLNFEFPVYEAEDEEGDDI--PYEITRLLEQERKAIQPHQEEIEL 481
           R     P G +     ++FE  + + EDE  +D+  P E+ R++  E + + PHQEE EL
Sbjct: 813 RSDDESPEGTNTWDPSIDFEQKMNQTEDEGNEDVGLPPELERMVAHEDQEMGPHQEETEL 992

Query: 482 INLGTEENKREIKVGAALEEGVKRKIFQLL*EYPDIFAWSYEDMPGLDPKIVEHRIPTKP 541
           ++LG+   KRE+K+G  +   ++ ++  LL +Y DIFAWSY+DMPGL   IV+HR+P  P
Sbjct: 993 VDLGSGSGKREVKIGTGITAPIREELIILLRDYQDIFAWSYQDMPGLSSDIVQHRLPLNP 1172

Query: 542 ECPPVRQKLRRTHPDMALKIKSEV*KQIDAGFLMTIEYPEWVANIVPVP 590
           EC PV+QKLRR  P+ +LKIK EV K  DAGFL    YP+WVANIVP+P
Sbjct: 1173ECSPVKQKLRRMKPETSLKIKEEVKK*FDAGFLAVARYPKWVANIVPIP 1319


>BQ628592 
          Length = 423

 Score =  100 bits (248), Expect(2) = 3e-38
 Identities = 44/76 (57%), Positives = 58/76 (75%)
 Frame = -1

Query: 804 LRKNQPIVWNDECQGAFDSIKNYLLEPPILVPPMEGKPLIMYLSVFDESVGCVLGQQDET 863
           L KNQ I+WN   Q AF+ IK  L  P +L+PP+ G+P ++Y+++ DES+GCVL Q D++
Sbjct: 423 LPKNQAILWNSNYQEAFEKIKQSLANPSVLMPPVTGRPFLLYMTMLDESMGCVLVQHDDS 244

Query: 864 GKKEHAIYYLSKKFTD 879
           GKKE AIYYLSKKFTD
Sbjct: 243 GKKEQAIYYLSKKFTD 196



 Score = 79.0 bits (193), Expect(2) = 3e-38
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -3

Query: 884 YMMLEKTCCAPAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKPAVLLGRL 933
           Y MLE+TCC   WA+ RLR Y+++HTTWLIS+MDP+KYIFEKPA L GR+
Sbjct: 184 YSMLERTCCTLVWASHRLRQYMLSHTTWLISKMDPVKYIFEKPA-LTGRI 38


>BG839293 
          Length = 781

 Score =  112 bits (281), Expect = 1e-24
 Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
 Frame = +1

Query: 404 Y*FQKICIKTSF*NHPTILRRLSHSKPVGHSNPTFPLNFEFPVYEAEDEEGDDI--PYEI 461
           Y F  IC+ TS      + R++    P G +     +NFE    + EDE  +D+  P E+
Sbjct: 301 YPFSFICMFTSL----FLKRQI**RVPEGTNTWDPLINFEQETSQTEDEGNEDVGLPPEL 468

Query: 462 TRLLEQERKAIQPHQEEIELINLGTEENKREIKVGAALEEGVKRKIFQLL*EYPDIFAWS 521
            R++  E + + PHQEE EL++LG    KRE+K+G  +   ++ ++  LL +Y DIFAWS
Sbjct: 469 ERMVAHEDQEMGPHQEETELVDLGIGSGKREVKIGTGITAPIREELIILLKDYQDIFAWS 648

Query: 522 YEDMPGLDPKIVEHRIPTKPECPPVRQ 548
           Y+DMPGL   IV+H++P  PEC PV+Q
Sbjct: 649 YQDMPGLSSDIVQHQLPLNPECSPVKQ 729


>TC223727 similar to UP|Q6WAY3 (Q6WAY3) Gag/pol polyprotein, partial (9%)
          Length = 843

 Score =  107 bits (268), Expect = 3e-23
 Identities = 77/232 (33%), Positives = 121/232 (51%)
 Frame = +3

Query: 1170 R*TMVL*HQVVLAKP*ISTGCLQQGQEDPEKIGQ*IPVRWRYSVQEKLRHGIVKIC**TR 1229
            R* +V  HQ +  K  I     +Q  ED EK+G       +++V EK RH    +C    
Sbjct: 129  R*ALVFRHQAICHKQRIPARDCRQ**EDIEKVGGRFLHERKHTV*EKPRHETSAVCGCQG 308

Query: 1230 SGAVNA*CT*RYLREPRYGAHYAKKVVTSRLLLDDHGA*LLPTLQKVP*MLNLC**DSCA 1289
              + +    *  +   R  A Y ++   SRLLL  HG *LL   +++P M ++  *  C 
Sbjct: 309  GKSHDRGSP*GLVWNARQRACYGQEDPKSRLLLAYHGK*LLCPCEEMPQMSSVRR*CQCP 488

Query: 1290 SACPQCYLLPMAVLHVGHRHDWKN*TASIKWSSFHFSGN*LLHQMG*SGILYQCNQASGS 1349
            +A  +C++LP+A LHVG+R    +*   ++WSS H   + L HQ+G    LY+ ++  G 
Sbjct: 489  TASSECHVLPLAFLHVGNRCHRGH*AQGLEWSSLHPRSDRLFHQVGRGSFLYRRHEGCGG 668

Query: 1350 QVHQEQHHLSIWCSQQDHYRKWYQPEQQCGASSL*RIQDRTS*FFSL*ASDE 1401
            QVH E+ HL IW +++D++ + +QP+ Q    +L  + +  S    L A DE
Sbjct: 669  QVH*ERDHLPIWFAKEDYHGQRHQPK*QDDGGNLRGV*NPASQSHXLPAKDE 824


>TC211067 similar to UP|Q9LQH2 (Q9LQH2) F15O4.13, partial (9%)
          Length = 589

 Score = 53.1 bits (126), Expect(2) = 9e-12
 Identities = 43/171 (25%), Positives = 69/171 (40%)
 Frame = +1

Query: 765 REMPAPQTEKQVRGFLRRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQGAFDSIK 824
           R  P  ++   +R F    ++  RF+ + +    P+ +L++KN    W ++ + AF  +K
Sbjct: 88  RMAPTLKSVGDIRSFHGLASFYRRFVPNFSTVASPLNELVKKNMAFTWGEKQEQAFALLK 267

Query: 825 NYLLEPPILVPPMEGKPLIMYLSVFDESVGCVLGQQDETGKKEHAIYYLSKKFTDCETRY 884
             L + P+L  P   K   +        V  VL Q        H I Y S+K       Y
Sbjct: 268 EKLTKAPVLALPDFSKTFELECDASGVGVRAVLLQGG------HPIAYFSEKLHSATLNY 429

Query: 885 MMLEKTCCAPAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKPAVLLGRLHA 935
              +K   A   A +   H+LV     + S    +KYI  K    L + HA
Sbjct: 430 PTYDKELYALIRAPQTWEHFLVCKEFVIHSDHQSLKYIRGKSK--LNKRHA 576



 Score = 36.6 bits (83), Expect(2) = 9e-12
 Identities = 12/25 (48%), Positives = 21/25 (84%)
 Frame = +2

Query: 746 GFIVSQKGIEVDPDKVRAIREMPAP 770
           GF+V + G+++DP+K++AI+E P P
Sbjct: 29  GFVVGRNGVQMDPEKIKAIQEWPPP 103


>TC224482 similar to UP|Q6WAY3 (Q6WAY3) Gag/pol polyprotein, partial (6%)
          Length = 669

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
 Frame = +3

Query: 1408 Q*EHQEDCPENGNYLQRLA*DVALCSAWLPYYSA*FNRGNPFLSCIWYGSSTSF-GSGDL 1466
            Q*E+Q+D P++   +Q LA D  +    LP +SA  N GN  L  IW G   +  G   +
Sbjct: 9    Q*EYQKDYPKDDRVIQGLARDAPIRVTRLPDFSANVNWGNAVLIGIWDGGCVTV*GRSPV 188

Query: 1467 ISPCDHGSKVIRG*MV-PKPV*SVELG*GKTYGCRGSWTVISSKNEDCL*QESPSSRIQG 1525
            I   D G   I+G  V    +*S +  *G       SW ++ +KNE+C+ QE   +++  
Sbjct: 189  IK--DLGRIRIKGIRVGSNAL*SAQPH*G*ALNGHESWALVPAKNEECIRQEGMLAQVP* 362

Query: 1526 R*TCIEKEDKPTTRPKGQVDA*L*GSLCCQEGLLWWCFNSYTHGWCRTSKSCEC*YSQEI 1585
               C ++       P  ++   L  + CC+EG       +Y HGW R + + E *  Q I
Sbjct: 363  GRPCAKENVPCCQGPSREMGPELRRAFCCEEGFFRRSPGAYQHGW*RVTFTHEF*CRQAI 542

Query: 1586 L 1586
            L
Sbjct: 543  L 545


>AW570005 
          Length = 413

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 43/141 (30%), Positives = 61/141 (42%)
 Frame = -2

Query: 768 PAPQTEKQVRGFLRRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQGAFDSIKNYL 827
           P P+T + +RGFLR   +  RFI    A   P+  LL K+   VW+ E   AF ++KN +
Sbjct: 412 PPPRTARSLRGFLRLTGFYRRFIKGYAAMAAPLSHLLTKDS-FVWSPEADVAFQALKNVV 236

Query: 828 LEPPILVPPMEGKPLIMYLSVFDESVGCVLGQQDETGKKEHAIYYLSKKFTDCETRYMML 887
               +L  P   KP  +        +G VL Q+       H I + SK+F     R    
Sbjct: 235 TNTLVLALPDFTKPFTVETDASGSDMGAVLSQEG------HPIAFFSKEFCPKLVRSSTY 74

Query: 888 EKTCCAPAWAAKRLRHYLVNH 908
                A     K+ R YL+ H
Sbjct: 73  VHELAAITNVVKKWRQYLLGH 11


>BI317507 
          Length = 359

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 34/114 (29%), Positives = 59/114 (50%)
 Frame = -1

Query: 701 DMIVKSKDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDK 760
           ++++ S D + H+ +LT + + L+K +L  N  KC F   + + LG ++S+  + +D +K
Sbjct: 353 NILIYSPDWKSHIMHLTAVLDVLKKERLVANRKKCYFSQTTIEYLGHVISKDCVAMDSNK 174

Query: 761 VRAIREMPAPQTEKQVRGFLRRLNYISRFISHMTATCGPIFKLLRKNQPIVWND 814
           V+++ E P P+  K+V  FLR   Y  +FI             L KN    W D
Sbjct: 173 VKSVIEWPVPKNVKRVCSFLRLTGYYRKFIKDYGKLAPRPLTDLTKNDGFKWGD 12


>BE802896 
          Length = 416

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 37/128 (28%), Positives = 58/128 (44%)
 Frame = -2

Query: 779 FLRRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQGAFDSIKNYLLEPPILVPPME 838
           FL    +  RFI        P+  LL+K     +ND+C+ AFD +K  L+  PI+  P  
Sbjct: 412 FLGHAGFYRRFIRDFRKVALPLSNLLQKEVEFDFNDKCK*AFDCLKRALITTPIIQAPDW 233

Query: 839 GKPLIMYLSVFDESVGCVLGQQDETGKKEHAIYYLSKKFTDCETRYMMLEKTCCAPAWAA 898
             P  +     + ++G VL Q+ +  K    IYY S+     +  Y   EK   A  +A 
Sbjct: 232 TAPFELMCDASNYALGVVLAQKID--KLPRVIYYSSRTLDAAQANYTTTEKELLAIVFAL 59

Query: 899 KRLRHYLV 906
           ++   YL+
Sbjct: 58  EKFHSYLL 35


>BG725601 similar to PIR|H86337|H86 protein F5M15.26 [imported] - Arabidopsis
           thaliana, partial (1%)
          Length = 285

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 32/90 (35%), Positives = 49/90 (53%)
 Frame = -3

Query: 535 HRIPTKPECPPVRQKLRRTHPDMALKIKSEV*KQIDAGFLMTIEYPEWVANIVPVPKKDG 594
           H++    +   V Q+ R+   +    +  EV K   A F+  I Y   + ++V V K +G
Sbjct: 277 HKLAICNDVKLVTQRKRKIREERCQTV*QEVVKLAIASFIRDINYST*LFSVVMVKKPNG 98

Query: 595 KVRMCVDFRDLNKASPKDNFPLPHIDVLVD 624
           K R+C D+ DLN A PKD +PLP+ID + D
Sbjct: 97  KWRICTDYIDLN*ACPKDAYPLPNIDHMTD 8


>AW184779 
          Length = 432

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
 Frame = +2

Query: 1298 LPMAVL-----HVGHRHDWKN*TASIKWSSFHFSGN*LLHQMG*SGILYQCN 1344
            +P+ VL     +VGHR D  +*    KW+S HFS N*LLHQMG S  +  C+
Sbjct: 257  IPLNVLAAPWPYVGHRRDRSH*AQGFKWTSLHFSRN*LLHQMGRSSFVC*CD 412


>BI498328 
          Length = 335

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 21/44 (47%), Positives = 28/44 (62%)
 Frame = +3

Query: 1019 RNRGNRCIPAGAPYSFYRPDSVRMYKQYGRIRSMYLWDRGSN*H 1062
            R+RG+ CIP  + YSF+      +Y+QYGR+RSM    RGS  H
Sbjct: 192  RSRGSPCIPG*SVYSFHG*TRF*LYQQYGRVRSMR--PRGSGGH 317


>BI785135 
          Length = 420

 Score = 38.5 bits (88), Expect = 0.024
 Identities = 17/71 (23%), Positives = 37/71 (51%)
 Frame = +1

Query: 753 GIEVDPDKVRAIREMPAPQTEKQVRGFLRRLNYISRFISHMTATCGPIFKLLRKNQPIVW 812
           G+ ++P +++ I E P P + + + GF    N+  RF+   +    P+ +L+R + P  W
Sbjct: 208 GVPMNPKRIKVIPEWPTPPSIR*IWGFHNLTNFYKRFVP*FSILVAPLIELVRNHVP-SW 384

Query: 813 NDECQGAFDSI 823
            +  +  F ++
Sbjct: 385 EEAQEMGFQTL 417


>BE804087 
          Length = 160

 Score = 37.0 bits (84), Expect = 0.069
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = +1

Query: 1407 SQ*EHQEDCPENGNYLQRLA*DVALCSAWLPYYSA*FNRGNPFLSCIWYGS 1457
            SQ*E+ E   E+ + +QRLA*DV  C A++      F  GN  L  +W GS
Sbjct: 7    SQ*EY*EKYLEDDSVVQRLA*DVFFCPAYVSNLGTNFYWGNTLLLGLWEGS 159


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.346    0.153    0.549 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,395,057
Number of Sequences: 63676
Number of extensions: 1340901
Number of successful extensions: 12423
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 8961
Number of HSP's successfully gapped in prelim test: 334
Number of HSP's that attempted gapping in prelim test: 2948
Number of HSP's gapped (non-prelim): 10014
length of query: 1586
length of database: 12,639,632
effective HSP length: 110
effective length of query: 1476
effective length of database: 5,635,272
effective search space: 8317661472
effective search space used: 8317661472
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.7 bits)
S2: 65 (29.6 bits)