Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147537.13 + phase: 0 
         (127 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC206312 weakly similar to UP|NLT1_PRUDU (Q43017) Nonspecific li...   155  5e-39
TC206311 similar to UP|Q8VX12 (Q8VX12) Lipid transfer protein pr...   150  1e-37
TC227679 similar to UP|NLT3_PRUDU (Q43019) Nonspecific lipid-tra...   135  7e-33
TC225089 similar to UP|Q93YX9 (Q93YX9) Lipid transfer protein, p...   104  1e-23
TC225088 similar to UP|Q6WAT8 (Q6WAT8) Lipid tranfer protein II,...   104  1e-23
TC225078 similar to UP|Q6WAT8 (Q6WAT8) Lipid tranfer protein II,...   104  1e-23
TC225072 similar to UP|Q6WAT8 (Q6WAT8) Lipid tranfer protein II,...   104  1e-23
TC216470 weakly similar to UP|Q9M6T9 (Q9M6T9) Lipid-transfer pro...   103  2e-23
TC218866 weakly similar to UP|NLTP_CICAR (O23758) Nonspecific li...   100  2e-22
TC216471 weakly similar to GB|CAB96874.1|8980444|MDO277164 mal d...    92  6e-20
TC225077 similar to UP|Q6WAT9 (Q6WAT9) Lipid transfer protein I,...    90  3e-19
TC204522 weakly similar to UP|Q93YX9 (Q93YX9) Lipid transfer pro...    89  7e-19
TC225100 weakly similar to UP|O24440 (O24440) Non-specific lipid...    86  3e-18
TC225098 weakly similar to UP|O24440 (O24440) Non-specific lipid...    84  2e-17
TC214266 weakly similar to UP|NLT1_ARATH (Q42589) Nonspecific li...    81  1e-16
TC222645 similar to PRF|2115353A.0|1098265|2115353A lipid transf...    69  6e-13
AW433248 similar to SP|Q9M5X6|NLTP_ Nonspecific lipid-transfer p...    69  8e-13
TC216409 similar to UP|Q9M7D7 (Q9M7D7) Lipid transfer protein, p...    68  1e-12
TC232101 weakly similar to UP|Q40454 (Q40454) Lipid transfer pro...    65  6e-12
CA936307 similar to PIR|T12079|T120 non-specific lipid transfer ...    65  1e-11

>TC206312 weakly similar to UP|NLT1_PRUDU (Q43017) Nonspecific lipid-transfer
           protein 1 precursor (LTP 1), partial (51%)
          Length = 767

 Score =  155 bits (392), Expect = 5e-39
 Identities = 76/125 (60%), Positives = 96/125 (76%), Gaps = 4/125 (3%)
 Frame = +1

Query: 4   STMATRLVCLAIVCLVTFG----PKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCC 59
           +++ TR+  +A++CL+  G    P A+  V SCG VV++L PC+SY++ GG TVPA QCC
Sbjct: 100 ASLQTRVFLMALLCLLALGATIIPMAQGEV-SCGQVVSNLTPCISYVLYGGATVPA-QCC 273

Query: 60  NGIRNLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPN 119
           NGIRNL  MAQT  DR+AVC CIKNAV  SGF+Y++ NLNLAA LP+ CGVNIPYQISP+
Sbjct: 274 NGIRNLYGMAQTKPDRQAVCNCIKNAVRNSGFTYSHFNLNLAANLPKNCGVNIPYQISPD 453

Query: 120 TDCNR 124
           TDC R
Sbjct: 454 TDCTR 468


>TC206311 similar to UP|Q8VX12 (Q8VX12) Lipid transfer protein precursor,
           partial (26%)
          Length = 915

 Score =  150 bits (380), Expect = 1e-37
 Identities = 71/121 (58%), Positives = 91/121 (74%)
 Frame = +1

Query: 4   STMATRLVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIR 63
           ++++TR+  +  +  +  GP A+  +T CG VV++L PC+SY++ GG  VP  QCCNGIR
Sbjct: 271 ASLSTRIFFIMSLVCLALGPMAQGEMT-CGQVVSNLTPCISYVVYGGTNVPE-QCCNGIR 444

Query: 64  NLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDCN 123
           NL  MAQT  DR+AVC CIKN V  SGF+Y++ NLNLAA LP+KCGVNIPYQISPNTDC 
Sbjct: 445 NLYGMAQTKPDRQAVCNCIKNGVRNSGFNYSDFNLNLAANLPKKCGVNIPYQISPNTDCT 624

Query: 124 R 124
           R
Sbjct: 625 R 627


>TC227679 similar to UP|NLT3_PRUDU (Q43019) Nonspecific lipid-transfer
           protein 3 precursor (LTP 3), partial (40%)
          Length = 659

 Score =  135 bits (339), Expect = 7e-33
 Identities = 69/124 (55%), Positives = 90/124 (71%), Gaps = 4/124 (3%)
 Frame = +2

Query: 5   TMATRLVCLAIVCLV----TFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCN 60
           ++  +L+ +AIVCLV    +  PKA+AAVT C  VV++L PC+SY++NGG TVP   CCN
Sbjct: 86  SVVEKLLWMAIVCLVLGVISITPKAQAAVT-CNQVVSNLTPCISYVLNGGKTVPGP-CCN 259

Query: 61  GIRNLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNT 120
           GI+ L  +A +T DR+ VC CIKNAVS   F Y   N++ AA LP++CGVNIPYQISP+T
Sbjct: 260 GIKTLFNLAHSTPDRQTVCKCIKNAVS--AFHYGKSNVDRAAALPKQCGVNIPYQISPST 433

Query: 121 DCNR 124
           DC R
Sbjct: 434 DCTR 445


>TC225089 similar to UP|Q93YX9 (Q93YX9) Lipid transfer protein, partial (78%)
          Length = 793

 Score =  104 bits (260), Expect = 1e-23
 Identities = 53/113 (46%), Positives = 75/113 (65%)
 Frame = +3

Query: 10  LVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMA 69
           ++C+ +   VT  P A+AA+T CG V   + PC+SY+ +GG   P+  CCNG+++L+  A
Sbjct: 225 MMCMVVAMSVT--PMAQAAIT-CGQVAGDVSPCLSYLRSGGK--PSDACCNGVKSLSGAA 389

Query: 70  QTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDC 122
           +TT DR+A C C+KN  +  G S   LN   AA LP KCGVNIPY+IS +T+C
Sbjct: 390 KTTADRQAACNCLKNLANNMGQS---LNAGNAASLPGKCGVNIPYKISTSTNC 539


>TC225088 similar to UP|Q6WAT8 (Q6WAT8) Lipid tranfer protein II, complete
          Length = 1006

 Score =  104 bits (259), Expect = 1e-23
 Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
 Frame = +2

Query: 14  AIVCLVTFG-PKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTT 72
           A++C+V    P A AA+T CG V +SL  C+ Y+  GG   P++ CCNG+++LN  A+TT
Sbjct: 347 AVLCMVVVSAPMAHAAIT-CGQVTSSLANCIGYLQKGGT--PSSGCCNGVKSLNAAAKTT 517

Query: 73  NDRRAVCTCIKNAVSQ-SGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDC 122
            DR+  C C+K+A SQ SGF   N     AA LP KCGV+IPY+IS +T+C
Sbjct: 518 ADRQTACNCLKSAASQISGFKANN-----AASLPGKCGVSIPYKISTSTNC 655


>TC225078 similar to UP|Q6WAT8 (Q6WAT8) Lipid tranfer protein II, partial
           (90%)
          Length = 697

 Score =  104 bits (259), Expect = 1e-23
 Identities = 52/113 (46%), Positives = 76/113 (67%)
 Frame = +1

Query: 10  LVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMA 69
           ++C+ +V + +  P A+AA+T CG V   + PC+SY+ +GG   P+  CCNG+++L+  A
Sbjct: 121 VMCMVVVAM-SAAPMAQAAIT-CGQVAGDVSPCLSYLRSGGK--PSDACCNGVKSLSGAA 288

Query: 70  QTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDC 122
           +TT DR+A C C+KN  +  G S   LN   AA LP KCGVNIPY+IS +T+C
Sbjct: 289 KTTADRQAACNCLKNLANNMGQS---LNAGNAASLPGKCGVNIPYKISTSTNC 438


>TC225072 similar to UP|Q6WAT8 (Q6WAT8) Lipid tranfer protein II, partial
           (90%)
          Length = 715

 Score =  104 bits (259), Expect = 1e-23
 Identities = 51/113 (45%), Positives = 76/113 (67%)
 Frame = +1

Query: 10  LVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMA 69
           ++C+ +V + +  P A+AA+T CG V   + PC SY+ +GG   P+  CCNG+++L++ A
Sbjct: 124 VMCMVVVAM-SAAPMAQAAIT-CGQVAGDMSPCFSYLRSGGK--PSQACCNGVKSLSSAA 291

Query: 70  QTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDC 122
           +TT DR+  C+C+KN  +  G S   LN   AA LP KCGVNIPY+IS +T+C
Sbjct: 292 KTTADRQGACSCLKNLANNMGQS---LNAGNAASLPGKCGVNIPYKISTSTNC 441


>TC216470 weakly similar to UP|Q9M6T9 (Q9M6T9) Lipid-transfer protein,
           partial (61%)
          Length = 648

 Score =  103 bits (257), Expect = 2e-23
 Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
 Frame = +3

Query: 12  CLAIVCLVTFG---PKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTM 68
           C+ +V + +FG   P AEA +  CG V  ++ PC+ Y+   G  VPA  CCNG++++N  
Sbjct: 111 CMVVVWMFSFGHIIPLAEAEIP-CGRVQITVAPCIGYLRGPGGGVPAP-CCNGVKSINNQ 284

Query: 69  AQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDCN 123
           A+TT DR+ VC C+K+ V     S   LNL   + LP KCG+N+PY+I+P  DCN
Sbjct: 285 AKTTPDRQGVCRCLKSTV----LSLAGLNLATLSALPSKCGINLPYKITPTIDCN 437


>TC218866 weakly similar to UP|NLTP_CICAR (O23758) Nonspecific lipid-transfer
           protein precursor (LTP), partial (83%)
          Length = 814

 Score =  100 bits (248), Expect = 2e-22
 Identities = 49/111 (44%), Positives = 68/111 (61%)
 Frame = +1

Query: 13  LAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTT 72
           +A++ +V        A  +CG V  ++ PC+ Y+  GG   P A+CCNG+RNL+ +A+TT
Sbjct: 103 VAVLYMVVVSAHMAHARINCGRVAVAVSPCLGYLRRGGR--PQARCCNGVRNLHALAKTT 276

Query: 73  NDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDCN 123
            DRR  C C+K      G     +N N AA LPRKC VNIPY+IS +T+CN
Sbjct: 277 VDRRTACNCLKTFARGLG---RGVNANNAAALPRKCRVNIPYKISISTNCN 420


>TC216471 weakly similar to GB|CAB96874.1|8980444|MDO277164 mal d 3 {Malus x
           domestica;} , partial (89%)
          Length = 479

 Score = 92.0 bits (227), Expect = 6e-20
 Identities = 43/83 (51%), Positives = 54/83 (64%)
 Frame = +3

Query: 41  PCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNL 100
           PC+ Y+   G  VPAA CCNG+R++N  A+TT DR+ VC C+K     +  S   LNL  
Sbjct: 18  PCIGYLRGPGGGVPAA-CCNGVRSINKEAKTTPDRQGVCRCLKT----TALSLPGLNLAT 182

Query: 101 AAGLPRKCGVNIPYQISPNTDCN 123
            A LP KCGVN+PY+ISP  DCN
Sbjct: 183 LAALPSKCGVNLPYKISPTIDCN 251


>TC225077 similar to UP|Q6WAT9 (Q6WAT9) Lipid transfer protein I, partial
           (73%)
          Length = 681

 Score = 89.7 bits (221), Expect = 3e-19
 Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = +3

Query: 37  TSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQ-SGFSYTN 95
           +SL  C+ Y+  GG   P++ CCNG+++LN  A+TT DR+  C C+K+A SQ SGF    
Sbjct: 210 SSLANCIGYLQKGGT--PSSGCCNGVKSLNAAAKTTADRQTACNCLKSAASQISGF---- 371

Query: 96  LNLNLAAGLPRKCGVNIPYQISPNTDC 122
            N N AA LP KCGV+IPY+IS +T+C
Sbjct: 372 -NANNAASLPGKCGVSIPYKISTSTNC 449


>TC204522 weakly similar to UP|Q93YX9 (Q93YX9) Lipid transfer protein,
           partial (27%)
          Length = 881

 Score = 88.6 bits (218), Expect = 7e-19
 Identities = 41/115 (35%), Positives = 68/115 (58%)
 Frame = +3

Query: 9   RLVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTM 68
           ++ C+ ++C+            SC  V  +L PC+SY+M GG+ VP + CC+G+RN+   
Sbjct: 198 KVACVVLMCMAVMSAPMMVQAVSCNDVSVNLAPCLSYLMQGGD-VPES-CCSGVRNILGS 371

Query: 69  AQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDCN 123
           A TT D++ VC C++ A +  G     +N   A  LP +C V++PY+IS +T+C+
Sbjct: 372 ASTTFDKQTVCKCLQQAANNYG-----INDEYAQALPARCNVSVPYKISRSTNCD 521


>TC225100 weakly similar to UP|O24440 (O24440) Non-specific lipid transfer
           protein PvLTP-24, partial (84%)
          Length = 603

 Score = 86.3 bits (212), Expect = 3e-18
 Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
 Frame = +1

Query: 3   YSTMATRLVCLAIVCL-VTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNG 61
           Y    T     A++C+     P A AA+T CG V  SL  C+ Y+ NGG   P + CCNG
Sbjct: 301 YMASLTGASLAAVLCMDAESAPMAHAAIT-CGQVTNSLINCIGYLQNGGT--PPSGCCNG 471

Query: 62  IRNLNTMAQTTNDRRAVCTCIKNAVSQ-SGFSYTNLNLNLAAGLPRKCG 109
           +++LN  A+TT DR+  C C+K+A SQ SGF   N     AA LP KCG
Sbjct: 472 VKSLNAAAKTTADRQTACNCLKSAASQISGFKANN-----AASLPGKCG 603


>TC225098 weakly similar to UP|O24440 (O24440) Non-specific lipid transfer
           protein PvLTP-24, partial (97%)
          Length = 717

 Score = 84.0 bits (206), Expect = 2e-17
 Identities = 45/110 (40%), Positives = 64/110 (57%), Gaps = 1/110 (0%)
 Frame = +1

Query: 14  AIVCLVTFG-PKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTT 72
           A++C+V    P A AA+T CG V +SL  C+ Y+  GG   P++ CCNG+++LN   + T
Sbjct: 400 AVLCMVVVSAPMAHAAIT-CGQVTSSLTNCIGYLQKGGT--PSSGCCNGVKSLNAATKIT 570

Query: 73  NDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDC 122
            DR+  C C+K   SQ      +   N A  LP  CGV I Y+IS +T+C
Sbjct: 571 ADRQTECNCLKLVASQ----IYSFKANNAVSLPG*CGVYILYKISTSTNC 708


>TC214266 weakly similar to UP|NLT1_ARATH (Q42589) Nonspecific lipid-transfer
           protein 1 precursor (LTP 1), partial (36%)
          Length = 699

 Score = 81.3 bits (199), Expect = 1e-16
 Identities = 39/110 (35%), Positives = 62/110 (55%)
 Frame = +3

Query: 13  LAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTT 72
           + I+C+   G    A   +C  V  ++  C+SY+M GG   P+  CC+G++N+   A TT
Sbjct: 108 VVIMCMAVVGAPMMAQAMTCNDVTVNMAQCLSYLMQGGT--PSTLCCSGVKNILGSAVTT 281

Query: 73  NDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDC 122
            D++ VC C+K   ++      N+N   A  LP  C VN+PY+IS +T+C
Sbjct: 282 VDKQTVCNCLKADAAR-----YNINDQYAQALPGFCKVNVPYKISRSTNC 416


>TC222645 similar to PRF|2115353A.0|1098265|2115353A lipid transfer protein.
           {Hordeum vulgare;} , partial (27%)
          Length = 487

 Score = 68.9 bits (167), Expect = 6e-13
 Identities = 32/80 (40%), Positives = 47/80 (58%)
 Frame = +2

Query: 45  YIMNGGNTVPAAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGL 104
           Y+++G    PAA CC+G + L + A T+ D++A C CIK+          N+N  LA  L
Sbjct: 8   YLVSGSGQPPAA-CCSGAKALASAATTSEDKKAACNCIKSTSKS-----ININSQLAQAL 169

Query: 105 PRKCGVNIPYQISPNTDCNR 124
           P  CG+ +P  ISPN DC++
Sbjct: 170 PGNCGITLPVAISPNADCSK 229


>AW433248 similar to SP|Q9M5X6|NLTP_ Nonspecific lipid-transfer protein
           precursor (LTP) (Allergen Pyr c 3). [Pear] {Pyrus
           communis}, partial (23%)
          Length = 358

 Score = 68.6 bits (166), Expect = 8e-13
 Identities = 33/69 (47%), Positives = 44/69 (62%)
 Frame = +2

Query: 54  PAAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIP 113
           P+  CCNG+++L++ A TT DR+   TC+ N  +  G S   LN   A  LP KCGVNIP
Sbjct: 152 PSHACCNGLKSLSSAANTTYDRQRAYTCLINLANNMGQS---LNAGHAPSLPDKCGVNIP 322

Query: 114 YQISPNTDC 122
           Y IS +T+C
Sbjct: 323 YMISTSTNC 349


>TC216409 similar to UP|Q9M7D7 (Q9M7D7) Lipid transfer protein, partial (87%)
          Length = 762

 Score = 67.8 bits (164), Expect = 1e-12
 Identities = 37/115 (32%), Positives = 61/115 (52%), Gaps = 1/115 (0%)
 Frame = +1

Query: 10  LVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMA 69
           LV   + C++     AE+ + SC  +   L PC+ Y + GGN   ++ CC G+ +LN   
Sbjct: 97  LVASVMACMLITCSYAESTL-SCDQITIWLTPCIPYGVLGGNV--SSLCCQGVYSLNAAY 267

Query: 70  QTTNDRRAVCTCIKN-AVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDCN 123
           ++  DRR  C CIK+ A    G  YT +N      +  +CG   P+++ P+T+C+
Sbjct: 268 KSAEDRRGACQCIKDRAACIPGIDYTRVN-----QVGPRCGSKCPFKVYPSTNCS 417


>TC232101 weakly similar to UP|Q40454 (Q40454) Lipid transfer protein,
           partial (42%)
          Length = 518

 Score = 65.5 bits (158), Expect = 6e-12
 Identities = 36/115 (31%), Positives = 60/115 (51%), Gaps = 1/115 (0%)
 Frame = +2

Query: 10  LVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMA 69
           ++ +AI+ +   G  A     SC  V+  + PC S++  GG+  P+  CCNGI+ L+  A
Sbjct: 23  IISIAILLITRSGALASI---SCATVIEEVAPCTSFLQ-GGSKQPSVACCNGIKKLSGEA 190

Query: 70  QTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPY-QISPNTDCN 123
            T  +R A+C C+K  ++  G    N +      +P+ CG++     I  NTDC+
Sbjct: 191 GTHQNRTAICQCLKEGLATIG----NYDPKRVPQVPKDCGLSATLPPIDKNTDCS 343


>CA936307 similar to PIR|T12079|T120 non-specific lipid transfer protein
           LTP-24  drought and ABA induced - kidney bean, partial
           (59%)
          Length = 422

 Score = 64.7 bits (156), Expect = 1e-11
 Identities = 40/107 (37%), Positives = 56/107 (51%)
 Frame = +3

Query: 10  LVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMA 69
           L+C+ +V      P A AA+T CG V +SL PC+ YI  GG+  P A CC+ +++LN  A
Sbjct: 78  LLCMVVVS----APMAHAAIT-CGHVTSSLAPCIGYIQKGGS--PPAPCCS*VKSLNAAA 236

Query: 70  QTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQI 116
           +TT DR+      +   S+ G                KCGV+IPY I
Sbjct: 237 KTTTDRQQ-----RRLASRQG----------------KCGVSIPYMI 314


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.322    0.134    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,759,943
Number of Sequences: 63676
Number of extensions: 90030
Number of successful extensions: 539
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of query: 127
length of database: 12,639,632
effective HSP length: 86
effective length of query: 41
effective length of database: 7,163,496
effective search space: 293703336
effective search space used: 293703336
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)


Medicago: description of AC147537.13