TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147484.13 + phase: 0 /pseudo
         (575 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC232708                                                               30  3.8
TC230573 similar to UP|Q8LF32 (Q8LF32) Aspartyl aminopeptidase-l...    29  6.6
TC230922                                                               29  6.6
TC220327 similar to UP|Q8RY07 (Q8RY07) Serine/threonine protein ...    28  8.6

>TC232708 
          Length = 763

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -1

Query: 221 VAVTMESRKSLRHWHSFLDFTS 242
           VA T+++R+SL HW+SFL F S
Sbjct: 316 VAPTLKNRESLCHWNSFLWFRS 251


>TC230573 similar to UP|Q8LF32 (Q8LF32) Aspartyl aminopeptidase-like protein,
           partial (13%)
          Length = 418

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 174 DQLSLHGIGTTIRTCCFSTATF 195
           DQ+  HG+G  +R  CFS +TF
Sbjct: 94  DQIGSHGVGV*LRRHCFSDSTF 29


>TC230922 
          Length = 1013

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/47 (25%), Positives = 28/47 (59%)
 Frame = +1

Query: 190 FSTATFMSILVLVFNTLSSVHPKTLSTDQSWVAVTMESRKSLRHWHS 236
           FS+   + ++ +VFN L +++  +L    + +++ M+  K+L HW +
Sbjct: 661 FSSLPVLWVIDMVFNVL*TMYDVSLRVQLTHLSIHMQRCKTLLHWET 801


>TC220327 similar to UP|Q8RY07 (Q8RY07) Serine/threonine protein kinase pk23,
           partial (20%)
          Length = 780

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = +1

Query: 19  NWTTDSLTVTRLV--NLYSLLRGLGNMNYQIHYSREAEEIIFQLINNGEWDLLSARIHTV 76
           NWT+ S  + + V  +L  +  G+ ++       R+ E   FQL +   W      +H  
Sbjct: 154 NWTSKSFALLQSVCTSLKFIKNGIESLPQLSSILRKQETESFQLRS---WLRR*IWVHQP 324

Query: 77  SLKWLFQQENII-NSLCHQILKFC 99
           +L+W+   EN++ NS    I  FC
Sbjct: 325 TLQWVIGSENLMENSAWSDIQSFC 396


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.349    0.152    0.538 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,039,202
Number of Sequences: 63676
Number of extensions: 505270
Number of successful extensions: 4525
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3386
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 1087
Number of HSP's gapped (non-prelim): 3589
length of query: 575
length of database: 12,639,632
effective HSP length: 102
effective length of query: 473
effective length of database: 6,144,680
effective search space: 2906433640
effective search space used: 2906433640
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.8 bits)
S2: 62 (28.5 bits)