BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147484.10 - phase: 0 /pseudo
(1011 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BU550864 186 4e-47
BI973702 similar to GP|21703149|gb AT3g23670/MDB19_16 {Arabidops... 146 4e-35
TC207336 similar to UP|O24147 (O24147) Kinesin-like protein, par... 128 1e-29
TC232845 similar to UP|Q9LDN0 (Q9LDN0) Phragmoplast-associated k... 124 3e-28
TC214300 similar to UP|ATK1_ARATH (Q07970) Kinesin 1 (Kinesin-li... 122 1e-27
BI786996 weakly similar to GP|21703149|gb AT3g23670/MDB19_16 {Ar... 118 1e-26
TC217729 similar to UP|Q9CAC9 (Q9CAC9) Kinesin-like protein; 736... 116 6e-26
TC219629 similar to UP|ATK1_ARATH (Q07970) Kinesin 1 (Kinesin-li... 109 5e-24
CA853121 101 2e-21
CO982329 101 5e-21
TC230674 homologue to UP|Q9M0X6 (Q9M0X6) Kinesin-like protein, p... 98 2e-20
BU964987 similar to GP|15208447|gb kinesin heavy chain {Zea mays... 94 2e-19
BE440889 93 5e-19
TC215161 similar to UP|Q6NQ77 (Q6NQ77) At4g05190, partial (19%) 89 1e-17
AW832514 73 7e-13
TC220131 similar to UP|ATK2_ARATH (P46864) Kinesin 2 (Kinesin-li... 72 9e-13
BQ296671 similar to GP|18087642|gb AT5g27950/F15F15_20 {Arabidop... 67 4e-11
TC230398 homologue to UP|O24147 (O24147) Kinesin-like protein, p... 61 2e-09
AW830293 58 2e-08
AW756138 similar to GP|6056195|gb|A kinesin-like protein {Arabid... 57 4e-08
>BU550864
Length = 636
Score = 186 bits (472), Expect = 4e-47
Identities = 124/207 (59%), Positives = 141/207 (67%), Gaps = 1/207 (0%)
Frame = -2
Query: 767 ESRS*S*QVVS*KEETRIRC*ERV**GASGSHAFGYRRPCTTFRAVC*FGREARPIACKA 826
ES +*+*QV S*KEE R *E V G ++A GYRRPCT FR VC*F RE PIA +A
Sbjct: 635 ES*T*N*QVTS*KEEAGTRY*EEVCGGTE*NNANGYRRPCTNFRTVC*FRRETHPIA*QA 456
Query: 827 *KDSGRN*GCQESSFQSW-GKRCRVQVYKCPCCRNFSIKSRKGKRKAIL*GRK*RAPSPV 885
*KD G N* CQ SSFQS KRCR+ ++KCPC RNFSIKSRK KR K*R S
Sbjct: 455 *KDPGWN**CQGSSFQSSRSKRCRL*IHKCPCSRNFSIKSRKRKRNGNPKR*K*RTSSST 276
Query: 886 EGYCRSSASCR*TAFPS*RS*RIRH*CTETGYGCRAESCKGLPTN**VEEKT*EGGCIT* 945
EGYC SSASCR*T+ +* S R H TE G GCRA SCKGL TN**+EE+T*+G T*
Sbjct: 275 EGYC*SSASCR*TSCAT**SRRSCHYRTEAGDGCRAGSCKGLQTN**IEEET*QGD*HT* 96
Query: 946 *ACFRSTFAEEIDTTSL**CCHAQL** 972
*A ++TFA +TT * C+A L**
Sbjct: 95 *ATCQNTFA**RNTTYFR*PCNAYL** 15
>BI973702 similar to GP|21703149|gb AT3g23670/MDB19_16 {Arabidopsis
thaliana}, partial (4%)
Length = 421
Score = 146 bits (369), Expect = 4e-35
Identities = 95/141 (67%), Positives = 106/141 (74%), Gaps = 1/141 (0%)
Frame = +2
Query: 642 SSRSFEDGYRVKKIAR*TTRVS*FLQIGREGSIDG*STQFKKPASILY*FFIH-SKEAVS 700
SSRSFEDG RV+K AR T VS FLQIG E S+DG T+FKK ASIL * FIH SKEAVS
Sbjct: 2 SSRSFEDGDRVEKSARGTREVSKFLQIGGERSVDGRDTKFKKSASILC*LFIHISKEAVS 181
Query: 701 ITAIDWFI*TQFGSNNSYCHSRVNGGEE*DK*NSSISQRQF*SKT*TRKN*ME*GRKQVD 760
I AID +* Q+GSN + HS V+ GE DK*NS I Q +*S *TRKN*M+ GRKQVD
Sbjct: 182 IIAIDLLV*AQYGSN-PHRHSSVDRGESRDK*NSCIIQE*Y*STI*TRKN*MDRGRKQVD 358
Query: 761 FSF*RTESRS*S*QVVS*KEE 781
FSF*RTES +* *QV S*KE+
Sbjct: 359 FSF*RTES*A*K*QVAS*KEK 421
>TC207336 similar to UP|O24147 (O24147) Kinesin-like protein, partial (22%)
Length = 1055
Score = 128 bits (322), Expect = 1e-29
Identities = 74/186 (39%), Positives = 113/186 (59%), Gaps = 6/186 (3%)
Frame = +3
Query: 1 IYNEQITDLLDPSQRN---LQIREDVKSGVYVENLTEEQVSTMKDVTQLLLKGLSNRRIG 57
+Y + + DLL P L I++D V VEN+T +ST++++ ++ +G R I
Sbjct: 102 LYQDTLIDLLLPKNGKPLKLDIKKDSTGMVVVENVTVMSISTIEELNSIIQRGSERRHIS 281
Query: 58 ATSINSESSRSHTVFTCVVES---RCKSAADGVSRFKTSRINLVDLAGSERQKSTGAAGE 114
T +N ESSRSH + + V+ES + +S A G +++ VDLAGSER K +G+ G
Sbjct: 282 GTQMNDESSRSHLILSIVIESTNLQSQSVAKG-------KLSFVDLAGSERVKKSGSTGS 440
Query: 115 RLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCA 174
+LKEA +IN+SLS LG++I+ L+ Q H PYR+ +LT L+ +SLGGNAK M
Sbjct: 441 QLKEAQSINKSLSALGDVISSLSSGGQ-----HTPYRNHKLTMLMSDSLGGNAKTLMFVN 605
Query: 175 ISPAQS 180
++P +S
Sbjct: 606 VAPTES 623
>TC232845 similar to UP|Q9LDN0 (Q9LDN0) Phragmoplast-associated kinesin-related
protein 1, partial (7%)
Length = 613
Score = 124 bits (310), Expect = 3e-28
Identities = 90/135 (66%), Positives = 96/135 (70%), Gaps = 2/135 (1%)
Frame = +2
Query: 878 K*RAPSPVEGYCRSSASCR*TAFPS*RS*RIRH*CTETGYGCRAESCKGLPTN**VEEKT 937
K*RA VEG+CRSSASC *TAF +*R *R H CTETGYGCR SC L TN**VEE T
Sbjct: 23 K*RASVSVEGHCRSSASCW*TAFAA*RG*RSCHYCTETGYGCRTGSCLCLQTN**VEE*T 202
Query: 938 *EGGCIT**ACFRSTFAEEIDTTSL**-CCHAQL***LKGATLC**-V*AF**YCRRW*A 995
+G T**A RSTFA+ I TT L** CHAQL * LKGA C** V*A * CR W*A
Sbjct: 203 RKGDYHT**ASCRSTFAKGICTTDL**RWCHAQL-*QLKGAKQC**SV*ALY**CRVW*A 379
Query: 996 RKIGRTILVL*LRQM 1010
+ RTI+VL LRQM
Sbjct: 380 CQTSRTIVVLWLRQM 424
>TC214300 similar to UP|ATK1_ARATH (Q07970) Kinesin 1 (Kinesin-like protein
A), partial (27%)
Length = 903
Score = 122 bits (305), Expect = 1e-27
Identities = 77/196 (39%), Positives = 110/196 (55%), Gaps = 16/196 (8%)
Frame = +2
Query: 1 IYNEQITDLLDPSQ----------------RNLQIREDVKSGVYVENLTEEQVSTMKDVT 44
IYNE I DLL ++ + I+ D +V +LT V ++K+V
Sbjct: 2 IYNETIRDLLATNKSSADGTPTRVENGTPGKQYMIKHDANGNTHVSDLTVVDVQSVKEVA 181
Query: 45 QLLLKGLSNRRIGATSINSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAGSE 104
LL + S+R +G T +N +SSRSH VFT + +S V +NL+DLAGSE
Sbjct: 182 FLLNQAASSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGI----LNLIDLAGSE 349
Query: 105 RQKSTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLG 164
R +G+ G+RLKE IN+SLS L ++I LA+ K+ HIP+R+S+LT+LLQ LG
Sbjct: 350 RLSRSGSTGDRLKETQAINKSLSSLSDVIFALAK-----KEDHIPFRNSKLTYLLQPCLG 514
Query: 165 GNAKLAMVCAISPAQS 180
G++K M ISP Q+
Sbjct: 515 GDSKTLMFVNISPDQA 562
>BI786996 weakly similar to GP|21703149|gb AT3g23670/MDB19_16 {Arabidopsis
thaliana}, partial (2%)
Length = 421
Score = 118 bits (295), Expect = 1e-26
Identities = 81/135 (60%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Frame = +3
Query: 635 FKGEVRESSRSFEDGYRVKKIAR*TTRVS*FLQIGREGSIDG*STQFKKPASILY*FFIH 694
FKGE S RS ED RVKK R* TRVS FL I EGS+DG FKKPAS+L * FIH
Sbjct: 18 FKGEP*ASFRSSEDEDRVKKSTR*VTRVSEFLPIWGEGSVDGRDM*FKKPASLLC*LFIH 197
Query: 695 SK-EAVSITAIDWFI*TQFGSNNSYCHSRVNGGEE*DK*NSSISQRQF*SKT*TRKN*ME 753
S+ +A+S AID FI*T FGS +CHSR N G * K S I+ RQ SKT* K M+
Sbjct: 198 SRNKAISSIAIDLFI*T*FGS-KPHCHSRFNRG*H*GKRKSRIN*RQCQSKT*AGKKSMD 374
Query: 754 *GRKQVDFSF*RTES 768
GRKQVDFS *+TES
Sbjct: 375 RGRKQVDFSN*KTES 419
>TC217729 similar to UP|Q9CAC9 (Q9CAC9) Kinesin-like protein; 73641-79546,
partial (26%)
Length = 1075
Score = 116 bits (290), Expect = 6e-26
Identities = 75/180 (41%), Positives = 107/180 (58%), Gaps = 3/180 (1%)
Frame = +1
Query: 1 IYNEQITDLLDPS--QRNLQIREDVK-SGVYVENLTEEQVSTMKDVTQLLLKGLSNRRIG 57
IYNEQ+ DLL + Q+ L I + +G+ V + + V++M DV +L+ GL NR
Sbjct: 178 IYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDASMHSVNSMADVLELMNIGLMNRATS 357
Query: 58 ATSINSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAGSERQKSTGAAGERLK 117
AT++N SSRSH+V + V + ++LVDLAGSER + A G+ LK
Sbjct: 358 ATALNERSSRSHSVLSVHVRGTDLKT----NTLLRGCLHLVDLAGSERVDRSEATGDMLK 525
Query: 118 EAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCAISP 177
EA +IN+SLS LG++I L++ K H+PYR+S+LT LLQ SLGG AK M ++P
Sbjct: 526 EAQHINKSLSALGDVIFALSQ-----KSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNP 690
>TC219629 similar to UP|ATK1_ARATH (Q07970) Kinesin 1 (Kinesin-like protein
A), partial (26%)
Length = 923
Score = 109 bits (273), Expect = 5e-24
Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 10/190 (5%)
Frame = +1
Query: 1 IYNEQITDLLDPSQRNLQIREDVKSGV----------YVENLTEEQVSTMKDVTQLLLKG 50
IYNE I DLL ++ + ++ + +L +V + ++++ LL +
Sbjct: 79 IYNETIRDLLSSNRSSGNDHTRTENSAPTPSKQHTIKHESDLATLEVCSAEEISSLLQQA 258
Query: 51 LSNRRIGATSINSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAGSERQKSTG 110
+R +G T +N +SSRSH VF + R + V +NL+DLAGSER +G
Sbjct: 259 AQSRSVGRTQMNEQSSRSHFVFKLRISGRNEKTEKQVQGV----LNLIDLAGSERLSRSG 426
Query: 111 AAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLA 170
A G+RLKE IN+SLS L ++I LA+ K+ H+P+R+S+LT LQ LGG++K
Sbjct: 427 ATGDRLKETQAINKSLSSLSDVIFALAK-----KEEHVPFRNSKLTHFLQPYLGGDSKTL 591
Query: 171 MVCAISPAQS 180
M ISP QS
Sbjct: 592 MFVNISPDQS 621
>CA853121
Length = 677
Score = 101 bits (251), Expect = 2e-21
Identities = 69/150 (46%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Frame = +3
Query: 29 VENLTEEQVSTMKDVTQLLLKGLSNRRIGATSINSESSRSHTVFTCVVESRCKSAADGVS 88
V L E +V DV + L G R +G+TS N SSRSH + V + ++
Sbjct: 36 VPGLIEARVYGTVDVWEKLKSGNQARSVGSTSANELSSRSHCLLRVTVLGE-----NLIN 200
Query: 89 RFKT-SRINLVDLAGSERQKSTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRH 147
KT S + LVDLAGSER T A GERLKE+ IN+SLS LG++I+ LA K H
Sbjct: 201 GQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALA-----SKSAH 365
Query: 148 IPYRDSRLTFLLQESLGGNAKLAMVCAISP 177
IPYR+S+LT +LQ SLGG+ K M ISP
Sbjct: 366 IPYRNSKLTHILQSSLGGDCKTLMFVQISP 455
>CO982329
Length = 852
Score = 101 bits (252), Expect(2) = 5e-21
Identities = 54/128 (42%), Positives = 81/128 (63%)
Frame = -3
Query: 53 NRRIGATSINSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAGSERQKSTGAA 112
+R +G+T+ N SSRSHT+F+ +ES + S++NL+DLAGSE ++
Sbjct: 835 HRHVGSTNFNLLSSRSHTIFSLTIESSPCGENNEGEAITLSQLNLIDLAGSESSRAE-TT 659
Query: 113 GERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMV 172
G R +E IN+SL LG +I+ L E GK HIPYRDS+LT LLQ SL G+ +++++
Sbjct: 658 GMRRREGSYINKSLLTLGTVISKLTE----GKASHIPYRDSKLTRLLQSSLSGHGRISLI 491
Query: 173 CAISPAQS 180
C ++P+ S
Sbjct: 490 CTVTPSSS 467
Score = 18.9 bits (37), Expect(2) = 5e-21
Identities = 5/12 (41%), Positives = 9/12 (74%)
Frame = -2
Query: 191 QYIEICTTCQSH 202
QY+E+C ++H
Sbjct: 449 QYVEVCPPGKAH 414
>TC230674 homologue to UP|Q9M0X6 (Q9M0X6) Kinesin-like protein, partial (20%)
Length = 811
Score = 97.8 bits (242), Expect = 2e-20
Identities = 57/128 (44%), Positives = 78/128 (60%)
Frame = +1
Query: 53 NRRIGATSINSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAGSERQKSTGAA 112
+R +G T +N +SSRSH V T + + V +NL+DLAGSER +GA
Sbjct: 91 SRSVGRTHMNEQSSRSHFVXTLRISGTNSNTDQQVQGV----LNLIDLAGSERLSRSGAT 258
Query: 113 GERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMV 172
G+RLKE IN+SLS L ++I LA+ KQ H+P+R+S+LT+LLQ LGG++K M
Sbjct: 259 GDRLKETQAINKSLSSLSDVIFALAK-----KQEHVPFRNSKLTYLLQPCLGGDSKTLMF 423
Query: 173 CAISPAQS 180
ISP S
Sbjct: 424 VNISPDPS 447
>BU964987 similar to GP|15208447|gb kinesin heavy chain {Zea mays}, partial
(19%)
Length = 443
Score = 94.4 bits (233), Expect = 2e-19
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = +2
Query: 1 IYNEQITDLLDPSQRNLQIREDVKSGVYVENLTEEQVSTMKDVTQLLLKGLSNRRIGATS 60
IYNE I DLL +L++R+D + G VE LTEE + + +LL + R++G T
Sbjct: 20 IYNEIIRDLLSTENTSLRLRDDPERGPIVEKLTEETLRNWVHLKELLSFCEAQRQVGETY 199
Query: 61 INSESSRSHTVFTCVVESRCKS-AADGVSRFKTSRINLVDLAGSERQKSTGAAGERLKEA 119
+N +SSRSH + +ES + S + +N VDLAGSER +AG RLKE
Sbjct: 200 LNDKSSRSHQIIRLTIESSAREFMGKSSSTTLAASVNFVDLAGSERASQALSAGARLKEG 379
Query: 120 GNINRSLSQLGNLINILAE 138
+INRSL LG +I L++
Sbjct: 380 CHINRSLLTLGTVIRKLSK 436
>BE440889
Length = 484
Score = 93.2 bits (230), Expect = 5e-19
Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Frame = +2
Query: 67 RSHTVFTCV--VESRCKSAADGVSRFKTSRINLVDLAGSERQKSTGAAGERLKEAGNINR 124
R + F C+ + + K+ +G S S++ LVDLAGSER T GERLKEA NINR
Sbjct: 5 RHQSRFLCLLCIAVKAKNLLNGEST--KSKLWLVDLAGSERLAKTDVQGERLKEAQNINR 178
Query: 125 SLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCAISPA 178
SLS LG++I+ LA K HIPYR+S+LT LLQ+SLGG++K M ISP+
Sbjct: 179 SLSALGDVISALA-----AKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPS 325
>TC215161 similar to UP|Q6NQ77 (Q6NQ77) At4g05190, partial (19%)
Length = 692
Score = 89.0 bits (219), Expect = 1e-17
Identities = 54/122 (44%), Positives = 74/122 (60%)
Frame = +2
Query: 61 INSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAGSERQKSTGAAGERLKEAG 120
+N +SSRSH VFT + +S V +NL+DLAGSER +G+ G+RLKE
Sbjct: 41 MNEQSSRSHFVFTLRIYGVNESTDXXVQGV----LNLIDLAGSERLSKSGSTGDRLKETQ 208
Query: 121 NINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCAISPAQS 180
IN+SLS L ++I LA+ K+ H+P+R+S+LT+LLQ LGG + M ISP S
Sbjct: 209 AINKSLSSLSDVIFALAK-----KEDHVPFRNSKLTYLLQPCLGGYSNTLMFVNISPDPS 373
Query: 181 LV 182
V
Sbjct: 374 SV 379
>AW832514
Length = 412
Score = 72.8 bits (177), Expect = 7e-13
Identities = 41/88 (46%), Positives = 58/88 (65%)
Frame = +3
Query: 49 KGLSNRRIGATSINSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAGSERQKS 108
+G++NR +G T +N SSRSH ++ ++ S D +RF ++ LVDLAGSE+ +
Sbjct: 141 RGIANRAVGETQMNVASSRSHCIYIFTIQQEFLSR-DKRTRF--GKLILVDLAGSEKVEK 311
Query: 109 TGAAGERLKEAGNINRSLSQLGNLINIL 136
TGA G L+EA IN+SLS LGN+IN L
Sbjct: 312 TGAEGRVLEEAKTINKSLSALGNVINSL 395
>TC220131 similar to UP|ATK2_ARATH (P46864) Kinesin 2 (Kinesin-like protein
B), partial (37%)
Length = 1044
Score = 72.4 bits (176), Expect = 9e-13
Identities = 43/105 (40%), Positives = 63/105 (59%)
Frame = +1
Query: 46 LLLKGLSNRRIGATSINSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAGSER 105
LL + ++R +G T +N +SSRSH VFT + +S V +NL+DLAGSER
Sbjct: 757 LLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGV----LNLIDLAGSER 924
Query: 106 QKSTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPY 150
+G+ G+RLKE IN+SLS L ++I LA+ K+ H+P+
Sbjct: 925 LSKSGSTGDRLKETQAINKSLSSLSDVIFALAK-----KEDHVPF 1044
>BQ296671 similar to GP|18087642|gb AT5g27950/F15F15_20 {Arabidopsis
thaliana}, partial (20%)
Length = 422
Score = 67.0 bits (162), Expect = 4e-11
Identities = 37/92 (40%), Positives = 59/92 (63%)
Frame = +3
Query: 88 SRFKTSRINLVDLAGSERQKSTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRH 147
++ + S++ ++DL GSER TGA G L E IN SLS L +++ L K+ H
Sbjct: 147 AKSEVSKLWMIDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVVAALKR-----KRCH 311
Query: 148 IPYRDSRLTFLLQESLGGNAKLAMVCAISPAQ 179
+PYR+S+LT +L++SLG +K+ M+ ISP++
Sbjct: 312 VPYRNSKLTQILKDSLGYGSKVLMLVHISPSE 407
>TC230398 homologue to UP|O24147 (O24147) Kinesin-like protein, partial (10%)
Length = 599
Score = 61.2 bits (147), Expect = 2e-09
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +3
Query: 117 KEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCAIS 176
KEA +IN+SLS LG++I+ L+ Q HIPYR+ +LT L+ +SLGGNAK M +S
Sbjct: 3 KEAQSINKSLSALGDVISALSSGGQ-----HIPYRNHKLTMLMSDSLGGNAKTLMFVNVS 167
Query: 177 PAQS 180
P +S
Sbjct: 168 PVES 179
>AW830293
Length = 292
Score = 58.2 bits (139), Expect = 2e-08
Identities = 37/101 (36%), Positives = 56/101 (54%)
Frame = +2
Query: 19 IREDVKSGVYVENLTEEQVSTMKDVTQLLLKGLSNRRIGATSINSESSRSHTVFTCVVES 78
IR + G+ V + + VS+ DV +L+ G NR +GAT++N SSRSH+ T V+
Sbjct: 2 IRSSSQKGLSVPDASLVPVSSTIDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQG 181
Query: 79 RCKSAADGVSRFKTSRINLVDLAGSERQKSTGAAGERLKEA 119
R ++ ++LVDLA SER + A +RLK+A
Sbjct: 182 RDLTS----GAILRGCMHLVDLAXSERVDKSDATXDRLKQA 292
>AW756138 similar to GP|6056195|gb|A kinesin-like protein {Arabidopsis
thaliana}, partial (8%)
Length = 313
Score = 57.0 bits (136), Expect = 4e-08
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 IYNEQITDLL--DPSQRNLQIREDVKSGVYVENLTEEQVSTMKDVTQLLLKGLSNRRIGA 58
IYNEQ+ DLL D + L+IR G+ + + V + DV L+ G NR + +
Sbjct: 16 IYNEQVRDLLAEDKTDNKLEIRSCNDDGLSLPDAILHSVKSPTDVMTLIKLGEVNRAVSS 195
Query: 59 TSINSESSRSHTVFTCVVESRCKSAADGVSRFKTSRINLVDLAG 102
T++N+ SSRSH+V T V + S + S ++LVDLAG
Sbjct: 196 TAMNNRSSRSHSVLTVHVNGKDTSGSS-----IRSCLHLVDLAG 312
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.375 0.168 0.667
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,476,687
Number of Sequences: 63676
Number of extensions: 596206
Number of successful extensions: 8824
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2574
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 6124
Number of HSP's gapped (non-prelim): 3077
length of query: 1011
length of database: 12,639,632
effective HSP length: 107
effective length of query: 904
effective length of database: 5,826,300
effective search space: 5266975200
effective search space used: 5266975200
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 13 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 35 (21.5 bits)
S2: 64 (29.3 bits)
Medicago: description of AC147484.10