BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147435.2 + phase: 0
(384 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC216827 similar to UP|Q9SGW8 (Q9SGW8) F1N19.4, partial (57%) 152 2e-37
CA935325 140 7e-34
TC209636 similar to UP|Q9FNF8 (Q9FNF8) Ubiquitin, partial (47%) 117 1e-26
TC210795 110 1e-24
TC203571 UP|Q41067 (Q41067) Polyubiquitin, partial (29%) 77 1e-14
TC203627 UP|Q41067 (Q41067) Polyubiquitin, partial (47%) 77 1e-14
TC203313 PIR|S01425|UQMUM polyubiquitin 5 - Arabidopsis thaliana... 75 5e-14
TC203381 homologue to UP|Q8LPV5 (Q8LPV5) Polyubiquitin 2, complete 75 6e-14
TC203625 UP|Q39257 (Q39257) Ubiquitin, partial (83%) 75 6e-14
TC224570 UP|Q41067 (Q41067) Polyubiquitin, partial (31%) 75 6e-14
TC214459 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ... 74 8e-14
TC225521 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ... 74 8e-14
TC203458 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ... 74 8e-14
CA851404 GP|15982787|g AT4g05320/C17L7_240 {Arabidopsis thaliana... 74 8e-14
TC225522 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ... 74 8e-14
TC203459 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ... 74 8e-14
TC214460 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ... 74 8e-14
TC224594 PIR|S01425|UQMUM polyubiquitin 5 - Arabidopsis thaliana... 74 8e-14
TC203374 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ... 74 8e-14
TC203465 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ... 74 8e-14
>TC216827 similar to UP|Q9SGW8 (Q9SGW8) F1N19.4, partial (57%)
Length = 1243
Score = 152 bits (385), Expect = 2e-37
Identities = 78/96 (81%), Positives = 82/96 (85%)
Frame = +1
Query: 259 PKIELASVIRNMVNSAYDGLASEYYPIGSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMA 318
PK LAS I NM NS Y+GL S YPI SAEGTGGAYFMLDSTGQKY+SVFKPIDEEPMA
Sbjct: 4 PKK*LASEIWNMRNSTYEGLDSGNYPIRSAEGTGGAYFMLDSTGQKYISVFKPIDEEPMA 183
Query: 319 VNNPRCLPLSLDGEGLKKGTIVGQGAFREVAAYVLE 354
VNNPR LP S DGEGLKKGT VGQGAFREVAAY+L+
Sbjct: 184 VNNPRGLPFSEDGEGLKKGTTVGQGAFREVAAYILD 291
>CA935325
Length = 453
Score = 140 bits (354), Expect = 7e-34
Identities = 69/105 (65%), Positives = 84/105 (79%)
Frame = +3
Query: 250 FLLEPIIVNPKIELASVIRNMVNSAYDGLASEYYPIGSAEGTGGAYFMLDSTGQKYVSVF 309
F LEPIIVNPKI + +M+NS ++GL +PI S+EGTGG Y M DSTGQ++VSVF
Sbjct: 6 FWLEPIIVNPKINFFPFLWDMINSTFEGLKKGNHPIRSSEGTGGTYLMRDSTGQEHVSVF 185
Query: 310 KPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQGAFREVAAYVLE 354
KP+DEEPMAVNNPR LP S +GEGLK+GT VG+GA REVAAY+L+
Sbjct: 186 KPMDEEPMAVNNPRGLPNSSNGEGLKRGTKVGEGALREVAAYLLD 320
>TC209636 similar to UP|Q9FNF8 (Q9FNF8) Ubiquitin, partial (47%)
Length = 895
Score = 117 bits (292), Expect = 1e-26
Identities = 57/74 (77%), Positives = 64/74 (86%)
Frame = +1
Query: 284 PIGSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQG 343
PI S+EG+GGAY M DS+G KYVSVFKPIDEEPMA+NNPR LP+S DGEGLKKGT VGQG
Sbjct: 13 PIQSSEGSGGAYLMQDSSGLKYVSVFKPIDEEPMAINNPRGLPVSEDGEGLKKGTRVGQG 192
Query: 344 AFREVAAYVLETQR 357
A REVAAY+L+ R
Sbjct: 193 ALREVAAYILDHPR 234
>TC210795
Length = 637
Score = 110 bits (275), Expect = 1e-24
Identities = 61/75 (81%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 MSSAGVSTLSPVDPTEPLLSPNAFH--LPSHLSFEDKSISIFLSVSGSLTPFRVMEWDTI 58
M+SAGVSTLS V PTEPLLSP AF +PSHLS EDKSI I+LS SGSLTP RVMEWDTI
Sbjct: 415 MASAGVSTLSVV-PTEPLLSPMAFPFPIPSHLSLEDKSIFIYLSFSGSLTPIRVMEWDTI 591
Query: 59 ESVKFKIQRCESLPF 73
ESVKFKIQR ESLPF
Sbjct: 592 ESVKFKIQRSESLPF 636
>TC203571 UP|Q41067 (Q41067) Polyubiquitin, partial (29%)
Length = 732
Score = 77.0 bits (188), Expect = 1e-14
Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Frame = +3
Query: 30 LSFEDKSISIFL-SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELA 88
L+F + IF+ +++G V DTI++VK KIQ E +P ++Q+L++AG++L
Sbjct: 39 LTFSTFKMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP--PDQQRLIFAGKQLE 212
Query: 89 RSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKE 148
TL DY + + LHL+++L I VKT +GK + +VE + +K +I KE
Sbjct: 213 DGRTLA-DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 389
Query: 149 KQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 390 GIPPD--QQRLIFAGKQLEDGRTLADYNIQ-KESTLHLVLRLR 509
Score = 73.2 bits (178), Expect = 2e-13
Identities = 48/148 (32%), Positives = 83/148 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 306 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 476
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 477 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 650
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVR 189
G++LED + + D + ++ +HL +R
Sbjct: 651 AGKQLEDGRTLADYNIQ-KESTLHLVLR 731
>TC203627 UP|Q41067 (Q41067) Polyubiquitin, partial (47%)
Length = 1191
Score = 77.0 bits (188), Expect = 1e-14
Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Frame = +3
Query: 30 LSFEDKSISIFL-SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELA 88
L+F + IF+ +++G V DTI++VK KIQ E +P ++Q+L++AG++L
Sbjct: 66 LTFSTFKMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP--PDQQRLIFAGKQLE 239
Query: 89 RSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKE 148
TL DY + + LHL+++L I VKT +GK + +VE + +K +I KE
Sbjct: 240 DGRTLA-DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 416
Query: 149 KQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 417 GIPPD--QQRLIFAGKQLEDGRTLADYNIQ-KESTLHLVLRLR 536
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 561 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 731
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 732 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 905
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 906 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 992
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 333 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 503
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 504 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 677
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 678 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 764
Score = 48.9 bits (115), Expect = 4e-06
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 789 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 959
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRD-VKYIKRRIAKKE 148
+ LHL+++L I VK K+ R D + +K +I KE
Sbjct: 960 ESTLHLVLRLRGGMQIFVKDPHWKDHHPLRWRALDTIDNVKAKIQDKE 1103
>TC203313 PIR|S01425|UQMUM polyubiquitin 5 - Arabidopsis thaliana
{Arabidopsis thaliana;} , complete
Length = 1377
Score = 75.1 bits (183), Expect = 5e-14
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 7/168 (4%)
Frame = +1
Query: 31 SFEDKSISIFL-------SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYA 83
SF +SI + L +++G V DTI++VK KIQ E +P ++Q+L++A
Sbjct: 25 SFLHRSILLLLKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFA 198
Query: 84 GRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRR 143
G++L TL DY + + LHL+++L I VKT +GK + +VE + +K +
Sbjct: 199 GKQLEDGRTLA-DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 375
Query: 144 IAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
I KE D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 376 IQDKEGIPPD--QQRLIFAGKQLEDGRTLADYNIQ-KESTLHLVLRLR 510
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 535 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 705
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 706 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 879
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 880 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 966
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 763 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 933
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 934 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 1107
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 1108AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 1194
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 307 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 477
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 478 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 651
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 652 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 738
>TC203381 homologue to UP|Q8LPV5 (Q8LPV5) Polyubiquitin 2, complete
Length = 833
Score = 74.7 bits (182), Expect = 6e-14
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Frame = +2
Query: 26 LPSHLSFED-KSISIFL-SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYA 83
LPS LS ++ IF+ +++G V DTI++VK KIQ E +P ++Q+L++A
Sbjct: 29 LPSSLSLSLLNNMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFA 202
Query: 84 GRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRR 143
G++L TL DY + + LHL+++L +I VKT +GKE +E + IK R
Sbjct: 203 GKQLEDGRTLA-DYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKER 379
Query: 144 IAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
+ +EK+ +Q L+ G++L D K + + +V+HL + R
Sbjct: 380 V--EEKEGIPPVQQRLIYAGKQLADDKTAKEYNIE-GGSVLHLVLALR 514
>TC203625 UP|Q39257 (Q39257) Ubiquitin, partial (83%)
Length = 1427
Score = 74.7 bits (182), Expect = 6e-14
Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 558 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 728
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 729 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 902
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKRNA-KVHRRPFELSIVTTDLADTKTDD 216
G++LED + + D + ++ +HL +R R ++ + VT ++ + T D
Sbjct: 903 AGKQLEDGRTLADYNIQ-KESTLHLVLRLRGGMQIFVKTLTGKTVTLEVESSDTID 1067
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 102 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 272
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 273 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 446
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 447 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 533
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 330 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 500
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 501 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 674
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 675 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 761
Score = 73.9 bits (180), Expect = 1e-13
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 786 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 956
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 957 ESTLHLVLRLRGGMQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 1130
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 1131AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 1217
>TC224570 UP|Q41067 (Q41067) Polyubiquitin, partial (31%)
Length = 909
Score = 74.7 bits (182), Expect = 6e-14
Identities = 51/157 (32%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +2
Query: 36 SISIFL-SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLL 94
++ IF+ +++G V DTI++VK KIQ E +P ++Q+L++AG++L TL
Sbjct: 32 NMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA 205
Query: 95 KDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDL 154
DY + + LHL+++L I VKT +GK + +VE + +K +I KE D
Sbjct: 206 -DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD- 379
Query: 155 EEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
+Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 380 -QQRLIFAGKQLEDGRTLADYNIQ-KESTLHLVLRLR 484
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +2
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 281 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 451
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 452 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 625
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 626 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 712
>TC214459 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
sylvestris;} , partial (81%)
Length = 1470
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 333 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 503
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 504 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 677
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 678 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 764
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 561 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 731
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 732 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 905
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 906 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 992
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 105 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 275
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 276 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 449
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 450 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 536
>TC225521 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
sylvestris;} , partial (81%)
Length = 1405
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +2
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 287 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 457
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 458 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 631
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 632 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 718
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +2
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 515 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 685
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 686 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 859
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 860 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 946
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +2
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 59 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 229
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 230 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 403
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 404 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 490
>TC203458 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
sylvestris;} , partial (56%)
Length = 1048
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 201 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 371
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 372 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 545
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 546 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 632
Score = 72.4 bits (176), Expect = 3e-13
Identities = 47/136 (34%), Positives = 79/136 (57%)
Frame = +3
Query: 56 DTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQ 115
DTI++VK KIQ E +P ++Q+L++AG++L TL DY + + LHL+++L
Sbjct: 15 DTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQKESTLHLVLRLRGGM 185
Query: 116 LINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDI 175
I VKT +GK + +VE + +K +I KE D +Q L+ G++LED + + D
Sbjct: 186 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLADY 359
Query: 176 CCKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 360 NIQ-KESTLHLVLRLR 404
>CA851404 GP|15982787|g AT4g05320/C17L7_240 {Arabidopsis thaliana}, partial
(38%)
Length = 618
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 85 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 255
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 256 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 429
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 430 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 516
>TC225522 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
sylvestris;} , partial (50%)
Length = 639
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 159 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 329
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 330 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 503
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 504 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 590
Score = 55.5 bits (132), Expect = 4e-08
Identities = 35/119 (29%), Positives = 62/119 (51%)
Frame = +3
Query: 73 FLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVE 132
F ++Q+L+ +R L DY + + LHL+++L I VKT +GK + +VE
Sbjct: 15 FPRDQQRLILRRESSSRXGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 194
Query: 133 RGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
+ +K +I KE D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 195 SSDTIDNVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLADYNIQ-KESTLHLVLRLR 362
Score = 52.4 bits (124), Expect = 3e-07
Identities = 31/84 (36%), Positives = 50/84 (58%)
Frame = +3
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 387 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 557
Query: 102 GNVLHLIIKLSDLQLINVKTSSGK 125
+ LHL+++L I VKT +GK
Sbjct: 558 ESTLHLVLRLRGGMQIFVKTLTGK 629
>TC203459 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
sylvestris;} , partial (53%)
Length = 860
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +2
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 164 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 334
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 335 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 508
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 509 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 595
Score = 62.8 bits (151), Expect = 3e-10
Identities = 42/128 (32%), Positives = 72/128 (55%)
Frame = +2
Query: 64 KIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSS 123
KIQ E +P ++Q+L++AG++L TL DY + + LHL+++L I VKT +
Sbjct: 2 KIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQKESTLHLVLRLRGGMQIFVKTLT 172
Query: 124 GKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAV 183
GK + +VE + +K +I KE D +Q L+ G++LED + + D + ++
Sbjct: 173 GKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLADYNIQ-KEST 343
Query: 184 VHLFVRKR 191
+HL +R R
Sbjct: 344 LHLVLRLR 367
>TC214460 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
sylvestris;} , partial (49%)
Length = 851
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 109 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 279
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 280 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 453
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 454 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 540
Score = 50.4 bits (119), Expect = 1e-06
Identities = 34/108 (31%), Positives = 58/108 (53%)
Frame = +1
Query: 84 GRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRR 143
G++L TL DY + + LHL+++L I VKT +GK + +VE + +K +
Sbjct: 1 GKQLEDGRTLA-DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 177
Query: 144 IAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
I KE D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 178 IQDKEGIPPD--QQRLIFAGKQLEDGRTLADYNIQ-KESTLHLVLRLR 312
>TC224594 PIR|S01425|UQMUM polyubiquitin 5 - Arabidopsis thaliana
{Arabidopsis thaliana;} , partial (80%)
Length = 1156
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +2
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 320 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 490
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 491 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 664
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 665 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 751
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +2
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 548 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 718
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 719 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 892
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 893 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 979
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +2
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 92 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 262
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 263 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 436
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 437 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 523
>TC203374 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
sylvestris;} , partial (40%)
Length = 654
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 13 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 183
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 184 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 357
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 358 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 444
>TC203465 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
sylvestris;} , partial (76%)
Length = 911
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 295 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 465
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 466 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 639
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 640 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 726
Score = 74.3 bits (181), Expect = 8e-14
Identities = 49/150 (32%), Positives = 84/150 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 67 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 237
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 238 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIF 411
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 412 AGKQLEDGRTLADYNIQ-KESTLHLVLRLR 498
Score = 70.9 bits (172), Expect = 9e-13
Identities = 45/133 (33%), Positives = 75/133 (55%)
Frame = +1
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 523 TLTGKTITLEVESSDTIDNVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTLA-DYNIQK 693
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 694 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPD--QQRLIF 867
Query: 162 NGERLEDQKLIDD 174
G++LED + + D
Sbjct: 868 AGKQLEDGRTLAD 906
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.137 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,266,615
Number of Sequences: 63676
Number of extensions: 173813
Number of successful extensions: 1069
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of query: 384
length of database: 12,639,632
effective HSP length: 99
effective length of query: 285
effective length of database: 6,335,708
effective search space: 1805676780
effective search space used: 1805676780
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC147435.2