BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147406.4 - phase: 0
(310 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225989 weakly similar to UP|Q8VYH6 (Q8VYH6) AT4g17280/dl4675c,... 489 e-139
TC225987 weakly similar to UP|Q8VYH6 (Q8VYH6) AT4g17280/dl4675c,... 438 e-123
TC219306 weakly similar to UP|Q9LSE7 (Q9LSE7) Emb|CAB45497.1 (AT... 246 7e-66
TC225990 204 3e-53
TC219305 weakly similar to UP|Q9LSE7 (Q9LSE7) Emb|CAB45497.1 (AT... 189 1e-48
TC225988 weakly similar to UP|Q8VYH6 (Q8VYH6) AT4g17280/dl4675c,... 170 7e-43
CO985138 164 5e-41
TC230396 127 5e-30
TC208574 weakly similar to UP|Q9SSF3 (Q9SSF3) MLP3.2 protein, pa... 121 5e-28
TC208575 weakly similar to UP|Q9SSF3 (Q9SSF3) MLP3.2 protein, pa... 118 3e-27
BG507624 89 5e-27
AW350854 similar to GP|20197988|gb expressed protein {Arabidopsi... 112 2e-25
TC210008 111 4e-25
BG839852 97 9e-21
BQ299188 77 1e-14
BE474295 64 7e-11
TC204250 similar to UP|O96030 (O96030) Neurotrophic factor artem... 50 2e-06
TC204251 weakly similar to UP|O36027 (O36027) Wiskott-Aldrich Sy... 43 2e-04
TC204255 PDB|1OD5_A.0|33357661|1OD5_A Chain A, Crystal Structure... 42 5e-04
TC215157 homologue to UP|Q93YH3 (Q93YH3) ATP citrate lyase b-sub... 30 1.1
>TC225989 weakly similar to UP|Q8VYH6 (Q8VYH6) AT4g17280/dl4675c, partial
(41%)
Length = 1233
Score = 489 bits (1258), Expect = e-139
Identities = 233/301 (77%), Positives = 269/301 (88%)
Frame = +3
Query: 7 LVAIPQASGSPKAYTSNIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFATLTLPNGTTS 66
LVAIPQ++GSP+AYTS+I TST L+EG ISYPVSGLSAT+++N+VTIFATLTLPNGT+S
Sbjct: 3 LVAIPQSNGSPRAYTSSIASTSTTLEEGAISYPVSGLSATFESNQVTIFATLTLPNGTSS 182
Query: 67 LVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGSRQRRRNTHGVLNA 126
LVHVWQDG LS +TPQEHSHE+SHQNSKE+LDL+SG+S A+G SRQ+RRNTHGVLNA
Sbjct: 183 LVHVWQDGPLSG-TTPQEHSHETSHQNSKEILDLLSGSSTQATG-NSRQKRRNTHGVLNA 356
Query: 127 ISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYIVGLSGFGTGLKLGSDSEGIT 186
+SWGILMPTGA+IARYLKVFKSADPAWFYLHITCQ SAYIVG+SGFGTGLKLGSDSEG+
Sbjct: 357 VSWGILMPTGAIIARYLKVFKSADPAWFYLHITCQASAYIVGVSGFGTGLKLGSDSEGVE 536
Query: 187 YDTHRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTISISIVNVFKGFE 246
YDTHRAL IVLV L TLQVFALFLRPNKDH+ R YWN+YHH+VGY TI IS+VNVFKGF+
Sbjct: 537 YDTHRALGIVLVCLGTLQVFALFLRPNKDHRYRVYWNVYHHLVGYATIIISVVNVFKGFD 716
Query: 247 ALGDFVGDRYKNWKHAYIGIIGALGGIAVLLEAYTWMVCMKRKKADNKTSDGVNGANGHG 306
+ +VGDRY +WKHAYIGIIGALGGIAV LEA+TW++ KR+K++NK G NG NG+G
Sbjct: 717 TIEIYVGDRYNSWKHAYIGIIGALGGIAVFLEAFTWIIVFKRRKSENKIPHGANGVNGYG 896
Query: 307 S 307
S
Sbjct: 897 S 899
>TC225987 weakly similar to UP|Q8VYH6 (Q8VYH6) AT4g17280/dl4675c, partial
(45%)
Length = 1703
Score = 438 bits (1126), Expect = e-123
Identities = 218/307 (71%), Positives = 254/307 (82%)
Frame = +2
Query: 1 MIGAQALVAIPQASGSPKAYTSNIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFATLTL 60
M GAQALVAI +SG+P AYTS+I + T L EG ISY SGL+AT+Q+ +VTI+ATLTL
Sbjct: 500 MTGAQALVAIIPSSGAPNAYTSSIANPGTTLAEGAISYNHSGLTATHQSTEVTIYATLTL 679
Query: 61 PNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGSRQRRRNT 120
P+GTT+LVH+W DG +SS TP HS SS+ SKE LDL+SG+SQA SG S +RRRN
Sbjct: 680 PSGTTTLVHLWNDGPVSS-GTPAMHSMTSSNTQSKESLDLLSGSSQAGSG-NSLRRRRNV 853
Query: 121 HGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYIVGLSGFGTGLKLGS 180
HGVLNA+SWGILMP GA+IARYLKVFKSADPAWFYLH+TCQ SAYIVG++G+GTGLKLGS
Sbjct: 854 HGVLNALSWGILMPVGAIIARYLKVFKSADPAWFYLHVTCQTSAYIVGVAGWGTGLKLGS 1033
Query: 181 DSEGITYDTHRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTISISIVN 240
DS GI Y+THRAL I L L TLQVFAL LRPNKDHK+R YWNIYH+ VGY TI ISI+N
Sbjct: 1034DSVGIKYNTHRALGITLFCLGTLQVFALLLRPNKDHKIRIYWNIYHYAVGYSTIIISIIN 1213
Query: 241 VFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVLLEAYTWMVCMKRKKADNKTSDGVN 300
VFKGF+AL VGDRY +WKHAYIGII ALGGIAVLLEAYTW+V +KR+ ++NKT+ GVN
Sbjct: 1214VFKGFDALETSVGDRYNDWKHAYIGIIAALGGIAVLLEAYTWIVVLKRRNSENKTAHGVN 1393
Query: 301 GANGHGS 307
G NG+ S
Sbjct: 1394GTNGYDS 1414
>TC219306 weakly similar to UP|Q9LSE7 (Q9LSE7) Emb|CAB45497.1
(AT3g25290/MJL12_25), partial (46%)
Length = 939
Score = 246 bits (629), Expect = 7e-66
Identities = 119/250 (47%), Positives = 159/250 (63%), Gaps = 1/250 (0%)
Frame = +1
Query: 52 VTIFATLTLPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGI 111
+ IFAT+ +P S+ HVWQ G + H S+ NSK VL +G +
Sbjct: 22 IRIFATVKVPEKVESVNHVWQVGPSVTAGRIDRHDFGPSNMNSKGVLSF-NGAQVGGGAV 198
Query: 112 GSRQRRRNTHGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYIVGLSG 171
++N HG+LNA+SWG+L P G ++ARY++ F SADPAWFYLH+ CQVSAY +G++G
Sbjct: 199 DPITIKKNIHGILNAVSWGVLFPLGVIVARYMRTFPSADPAWFYLHVGCQVSAYAIGVAG 378
Query: 172 FGTGLKLGSDSEGITYDTHRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGY 231
+GTG+KLGS+S GI Y +HR + I L ATLQ+FALFLRP KDHK R+ WNIYHH VGY
Sbjct: 379 WGTGMKLGSESVGIQYRSHRYIGIALFCFATLQIFALFLRPVKDHKYRYIWNIYHHSVGY 558
Query: 232 VTISISIVNVFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVLLEAYTWMVCMKRKK- 290
+ + I+N+F+GF L + WK Y ++ ALG +A+ LE TW+V +KRK
Sbjct: 559 SIVILGIINIFRGFSIL-----HPDQKWKSTYTAVLIALGAVALFLEVITWIVVLKRKSY 723
Query: 291 ADNKTSDGVN 300
KT DG N
Sbjct: 724 KSTKTYDGYN 753
>TC225990
Length = 669
Score = 204 bits (520), Expect = 3e-53
Identities = 92/128 (71%), Positives = 108/128 (83%)
Frame = +1
Query: 180 SDSEGITYDTHRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTISISIV 239
SDSEG+ YDTHRAL IVLV L TLQVFALFLRPNKDHK R YWN+YHH+VGY TI IS+V
Sbjct: 1 SDSEGVDYDTHRALGIVLVCLGTLQVFALFLRPNKDHKYRVYWNVYHHLVGYATIIISVV 180
Query: 240 NVFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVLLEAYTWMVCMKRKKADNKTSDGV 299
N+F+GFE + +VGDRY +WKHAYIGIIGAL GIAV LEA+TW++ KR+K++NK G
Sbjct: 181 NIFEGFETIEKYVGDRYNSWKHAYIGIIGALAGIAVFLEAFTWIIVFKRRKSENKIPHGA 360
Query: 300 NGANGHGS 307
NGANG+GS
Sbjct: 361 NGANGYGS 384
>TC219305 weakly similar to UP|Q9LSE7 (Q9LSE7) Emb|CAB45497.1
(AT3g25290/MJL12_25), partial (39%)
Length = 627
Score = 189 bits (481), Expect = 1e-48
Identities = 88/164 (53%), Positives = 114/164 (68%), Gaps = 1/164 (0%)
Frame = +3
Query: 138 VIARYLKVFKSADPAWFYLHITCQVSAYIVGLSGFGTGLKLGSDSEGITYDTHRALAIVL 197
+IARY++ F ADPAWFYLH+ CQVS+Y +G++G+GTG+KLGS SEGI Y HR + I L
Sbjct: 6 IIARYMRTFXXADPAWFYLHVGCQVSSYAIGVAGWGTGMKLGSQSEGIQYSAHRYIGIFL 185
Query: 198 VTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTISISIVNVFKGFEALGDFVGDRYK 257
+ ATLQ+FALFLRP KDHK R+ WNIYHH +GY I + I+N+F+GF L +
Sbjct: 186 FSFATLQIFALFLRPVKDHKYRYIWNIYHHSIGYSIIILGIINIFRGFSIL-----HPDQ 350
Query: 258 NWKHAYIGIIGALGGIAVLLEAYTWMVCMKRKKA-DNKTSDGVN 300
WK Y ++ ALG +A+ LE TW+V +KRK KT DG N
Sbjct: 351 KWKSTYTAVLIALGAVALFLEVITWIVVLKRKSGKSTKTYDGHN 482
>TC225988 weakly similar to UP|Q8VYH6 (Q8VYH6) AT4g17280/dl4675c, partial
(12%)
Length = 752
Score = 170 bits (431), Expect = 7e-43
Identities = 83/110 (75%), Positives = 99/110 (89%)
Frame = +1
Query: 1 MIGAQALVAIPQASGSPKAYTSNIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFATLTL 60
MIGAQALVAIPQ++GSP+AYTS+I TST L+EG ISYP+SGLSAT++NN+VTIFATLTL
Sbjct: 418 MIGAQALVAIPQSNGSPRAYTSSITSTSTTLEEGAISYPLSGLSATFENNQVTIFATLTL 597
Query: 61 PNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASG 110
PNGTTS VHVWQDG LS +TP+EHSHE+SHQNSKE+LDL+SG+S +G
Sbjct: 598 PNGTTSFVHVWQDGPLSG-TTPREHSHETSHQNSKEILDLLSGSSTQPTG 744
>CO985138
Length = 847
Score = 164 bits (415), Expect = 5e-41
Identities = 88/215 (40%), Positives = 119/215 (54%), Gaps = 1/215 (0%)
Frame = -3
Query: 70 VWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGSRQRRRNTHGVLNAISW 129
VWQ G D P H + +S EV+DL T S R R+ HGVLN I W
Sbjct: 845 VWQVGYDIEDGHPLGHPTXXRNXDSTEVIDL---TDNGRSTGQYRSYLRSVHGVLNIIGW 675
Query: 130 GILMPTGAVIARYLKVFKSA-DPAWFYLHITCQVSAYIVGLSGFGTGLKLGSDSEGITYD 188
G L+P G + ARY +VF +P WF LHI CQ++ ++VG++G+ GL LG S T+
Sbjct: 674 GTLLPIGIITARYFRVFPFKWEPMWFNLHIGCQLTGFLVGITGWAIGLSLGHSSRYYTFH 495
Query: 189 THRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTISISIVNVFKGFEAL 248
HR I++ TL+T+Q+ A L+P R YWN+YHH +GY ++I +N+FKG L
Sbjct: 494 AHRNYGILIFTLSTVQMLAFRLKPKVTDDYRKYWNMYHHFLGYGLLAIIFINIFKGITIL 315
Query: 249 GDFVGDRYKNWKHAYIGIIGALGGIAVLLEAYTWM 283
V WK YIG + LG IA LE +TW+
Sbjct: 314 EGGVA-----WKWGYIGNLALLGTIAFGLEVFTWI 225
>TC230396
Length = 1001
Score = 127 bits (320), Expect = 5e-30
Identities = 88/283 (31%), Positives = 136/283 (47%), Gaps = 5/283 (1%)
Frame = +3
Query: 1 MIGAQALVAIPQASGSPKA---YTSNIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFAT 57
M+G+ A+V G K Y + ++ +G + P++ + A N I
Sbjct: 195 MVGSSAMVGWITKHGHAKIKQFYLRGRKQSEVKIDKGEL--PLNNIPAAVATNGAEIHIA 368
Query: 58 LTLPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGSRQ-- 115
L T Q +L+ S ++ H S H++ + V S ++G SR+
Sbjct: 369 FQLQMTTPFQK---QPILLAFGSKYPQNHHLSKHEDKTAI---VFDFSAGSTGPVSRELI 530
Query: 116 RRRNTHGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYIVGLSGFGTG 175
+ R HG+L I WG+++P GA+IARY F+ DP WFYLH Q + GL G
Sbjct: 531 QMRTNHGILAIIGWGLILPVGAIIARY---FRHKDPLWFYLHAIIQFVGFTFGLGTVILG 701
Query: 176 LKLGSDSEGITYDTHRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTIS 235
L+L S + + HR + I + L+ LQV ALFLRPNKD K+R +WN YH G + +
Sbjct: 702 LQLYSKMQ-VHIPAHRGIGIFALVLSILQVLALFLRPNKDSKIRKFWNWYHRWFGRMALV 878
Query: 236 ISIVNVFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVLLE 278
+ +N+ G +A G +WK Y + G + A++LE
Sbjct: 879 FAAINIVLGMQAAG-----AGSDWKIGYGFVFGIMVVAAIVLE 992
>TC208574 weakly similar to UP|Q9SSF3 (Q9SSF3) MLP3.2 protein, partial (31%)
Length = 1269
Score = 121 bits (303), Expect = 5e-28
Identities = 78/283 (27%), Positives = 134/283 (46%), Gaps = 5/283 (1%)
Frame = +1
Query: 1 MIGAQALVAIPQASGS----PKAYTSNIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFA 56
M+G+ A+V ++G+ + Y + + G + + T Q++++ +
Sbjct: 238 MVGSSAIVGWISSNGAGGGMKQYYLTGLTPNQVVPDRGNLKVLTNSTFITSQSSRLYMAF 417
Query: 57 TLTLPNGTTSLVHVW-QDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGSRQ 115
L + L++ + +GV P S + K + L T +A+ G
Sbjct: 418 QLETNQPLSKLIYAFGPNGVF-----PSAPSFALAQHQDKVSITLNYATGSSAT-TGKSY 579
Query: 116 RRRNTHGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYIVGLSGFGTG 175
+ +HG+LN + WGIL+ GA++ARY FK DP WFY H + Q +++G+ G +G
Sbjct: 580 NLKRSHGLLNILGWGILIIMGAIVARY---FKEWDPFWFYFHASVQSLGFVLGIVGVISG 750
Query: 176 LKLGSDSEGITYDTHRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTIS 235
L + H+AL I++ L LQ+ AL RP K+ K+R YWN YHH +G + I
Sbjct: 751 FVLNNQLH-TDVSLHKALGIIIFVLGCLQIMALLGRPKKESKVRKYWNAYHHNMGRILII 927
Query: 236 ISIVNVFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVLLE 278
++I N+F G + +G W Y ++ L +A+ E
Sbjct: 928 LAIANIFYGIK-----LGKEGSGWNIGYGIVLAVLFTMAITFE 1041
>TC208575 weakly similar to UP|Q9SSF3 (Q9SSF3) MLP3.2 protein, partial (17%)
Length = 907
Score = 118 bits (296), Expect = 3e-27
Identities = 65/190 (34%), Positives = 101/190 (52%)
Frame = +1
Query: 89 SSHQNSKEVLDLVSGTSQAASGIGSRQRRRNTHGVLNAISWGILMPTGAVIARYLKVFKS 148
+ HQ+ + S S A +G S + +HG+LN WGIL+ GA++ARY FK
Sbjct: 157 TQHQDKVSITLNYSTGSSATTG-NSYTILKRSHGILNIFGWGILIIMGAIVARY---FKE 324
Query: 149 ADPAWFYLHITCQVSAYIVGLSGFGTGLKLGSDSEGITYDTHRALAIVLVTLATLQVFAL 208
DP WFY H + Q +++G++G +G L + H+ L I++ LA LQ+ AL
Sbjct: 325 WDPFWFYFHASVQSLGFVLGVTGVISGFVLNNQLH-TDVSLHKVLGIIIFVLACLQIMAL 501
Query: 209 FLRPNKDHKLRFYWNIYHHVVGYVTISISIVNVFKGFEALGDFVGDRYKNWKHAYIGIIG 268
RP K+ K+R YWN+YHH +G + I ++I N+F G + +G W Y ++
Sbjct: 502 LGRPKKESKVRKYWNLYHHNLGRILIILAIANIFYGIK-----LGKEGSGWNIGYGIVLA 666
Query: 269 ALGGIAVLLE 278
L +A+ E
Sbjct: 667 VLLTMAITFE 696
>BG507624
Length = 268
Score = 89.0 bits (219), Expect(2) = 5e-27
Identities = 39/54 (72%), Positives = 47/54 (86%)
Frame = +2
Query: 113 SRQRRRNTHGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYI 166
SRQ+RRNTHGVLNA+SWG+L+PT A+ AR L VFKSA PAWFYLH+T Q SA++
Sbjct: 104 SRQKRRNTHGVLNAVSWGLLLPTXALFARSLXVFKSAXPAWFYLHLTXQASAFL 265
Score = 49.7 bits (117), Expect(2) = 5e-27
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +1
Query: 78 SDSTPQEHSHESSHQNSKEVLDLVSGTS 105
S +TPQEH HE+SHQNSKE+LDL+SG+S
Sbjct: 1 SGTTPQEHRHETSHQNSKEILDLLSGSS 84
>AW350854 similar to GP|20197988|gb expressed protein {Arabidopsis thaliana},
partial (35%)
Length = 538
Score = 112 bits (280), Expect = 2e-25
Identities = 58/152 (38%), Positives = 81/152 (53%)
Frame = -1
Query: 152 AWFYLHITCQVSAYIVGLSGFGTGLKLGSDSEGITYDTHRALAIVLVTLATLQVFALFLR 211
AWFY H QV +++G GF G++LG S G+ Y HR L + + L LQ AL R
Sbjct: 538 AWFYAHAGMQVFGFVLGTVGFVIGIRLGQLSPGVEYRLHRKLGMAVFCLGGLQTLALLFR 359
Query: 212 PNKDHKLRFYWNIYHHVVGYVTISISIVNVFKGFEALGDFVGDRYKNWKHAYIGIIGALG 271
PN +K R YW YHH VGY + + VNVF+GFE +G Y K Y + L
Sbjct: 358 PNTRNKFRKYWKSYHHFVGYSCVVLGFVNVFQGFEVMG--ASRSYA--KLTYCLGLSTLI 191
Query: 272 GIAVLLEAYTWMVCMKRKKADNKTSDGVNGAN 303
G+ + LE +W+V ++ K D +G+ G +
Sbjct: 190 GLCIALEVNSWVVFCRKSKEDKMRREGLIGTS 95
>TC210008
Length = 1054
Score = 111 bits (278), Expect = 4e-25
Identities = 77/268 (28%), Positives = 122/268 (44%), Gaps = 3/268 (1%)
Frame = +2
Query: 39 PVSGLSATYQNNKVTIFATLTLPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKE-- 96
P++ + A N I+ L + + + +L + ST +H S K
Sbjct: 41 PLNTVPAAVATNGAEIYIAFQLQ----TTIPFGKQPILLAFSTKHPLNHHLSKHVDKAAI 208
Query: 97 VLDLVSGTSQAASGIGSRQRRRNTHGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYL 156
+ D SG++ S R +HG++ I WG+++P GA+IARY F+ DP WFYL
Sbjct: 209 IFDFSSGSTGPVSN--GLIHMRKSHGIVGIIGWGLILPVGAIIARY---FRHKDPLWFYL 373
Query: 157 HITCQVSAYIVGLSGFGTGLKLGSDSEGITYDTHRALAIVLVTLATLQVFALFLRPNKDH 216
H Q + GL GL+L + + HR + I ++ L+ LQ+ A FLRP+KD
Sbjct: 374 HSVIQFVGFSFGLGTVLLGLQLYRNMH-VHIPAHRGIGIFVLVLSILQILAFFLRPDKDS 550
Query: 217 KLRFYWNIYHHVVGYVTISISIVNVFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVL 276
K R WN+YH G + + + +N+ G A G +WK Y ++ + ++
Sbjct: 551 KYRNIWNLYHGWFGRMALFFAALNIVLGMRAAG-----AGNDWKAGYGFLLSIVLVAVIV 715
Query: 277 LEAYTWMV-CMKRKKADNKTSDGVNGAN 303
LE ++ KR D V AN
Sbjct: 716 LEVLAYLKRSEKRSLPQTFQMDPVGEAN 799
>BG839852
Length = 685
Score = 97.1 bits (240), Expect = 9e-21
Identities = 50/109 (45%), Positives = 66/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 193 LAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTISISIVNVFKGFEALGDFV 252
LA+V + + L +FALFLRP KD K R+ WNIYHH VGY + + I+N F+GF L
Sbjct: 191 LAVVSLHVLIL*IFALFLRPVKDXKYRYXWNIYHHSVGYSIVILGIINXFRGFSIL---- 358
Query: 253 GDRYKNWKHAYIGIIGALGGIAVLLEAYTWMVCMKRKK-ADNKTSDGVN 300
+ WK Y ++ ALG +A+ LE TW+V +KRK KT DG N
Sbjct: 359 -HPDQKWKSTYTAVLIALGAVALFLEVITWIVVLKRKXYKSXKTYDGYN 502
>BQ299188
Length = 422
Score = 77.0 bits (188), Expect = 1e-14
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +1
Query: 42 GLSATYQNNK-VTIFATLTLPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDL 100
G AT N + IF T+ L T + VW G+ +P H S+ S D+
Sbjct: 61 GKMATVHNGAAIQIFGTVKLQTNKTKIHLVWNRGLYVQGYSPTIHPTTSTDLASIATFDV 240
Query: 101 VSGTSQAASGIGSRQRRRNTHGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITC 160
+SG+S A R HG +NAISWGIL+P GA+ ARYL+ ++ PAWFY H
Sbjct: 241 LSGSS--APQHTDLTTLRVIHGTVNAISWGILLPMGAITARYLRHIQALGPAWFYAHAGI 414
Query: 161 QV 162
Q+
Sbjct: 415 QL 420
>BE474295
Length = 422
Score = 64.3 bits (155), Expect = 7e-11
Identities = 42/137 (30%), Positives = 61/137 (43%), Gaps = 7/137 (5%)
Frame = +3
Query: 121 HGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYIVGLSGFGTGLKLGS 180
HG + ++WGIL P G + ARYLK K W+ +H+ Q S ++ L L +
Sbjct: 21 HGFMMFVAWGILFPGGILAARYLKHLKG--DGWYRIHVYLQYSGLVIVLLAL---LFAVA 185
Query: 181 DSEGITY-DTHRALAIVLVTLATLQVFALFLRPNKD------HKLRFYWNIYHHVVGYVT 233
+ G + TH + LA +Q FLRP K R W +H +VG
Sbjct: 186 ELRGFYFSSTHVKFGFATILLACIQPANAFLRPPKPANGEQASSKRVIWECFHTIVGRCA 365
Query: 234 ISISIVNVFKGFEALGD 250
I + I +F G + L D
Sbjct: 366 IVVGIAALFTGMKHLRD 416
>TC204250 similar to UP|O96030 (O96030) Neurotrophic factor artemin
(Pre-pro-neublastin) (Pre-pro-enovin precursor), partial
(8%)
Length = 891
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/114 (29%), Positives = 56/114 (48%), Gaps = 4/114 (3%)
Frame = +2
Query: 1 MIGAQALVAIPQASGSPKAYTS-NIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFATLT 59
M GA+AL+A+P SGS N+ + ++ LSA N +TI+ T+
Sbjct: 122 MAGAEALLALPSTSGSAVTLRRYNLTSYKSIDVVKAFTFESWDLSAEETNGAITIYGTVK 301
Query: 60 LPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLV---SGTSQAASG 110
+P+ ++ HVWQ G +++ P H + + ++K L + S S AASG
Sbjct: 302 IPDSAENVSHVWQVGPVAA-GVPAVHGFKDDNIHAKAALPVALAGSSGSSAASG 460
>TC204251 weakly similar to UP|O36027 (O36027) Wiskott-Aldrich Syndrome
protein homolog, partial (8%)
Length = 1045
Score = 42.7 bits (99), Expect = 2e-04
Identities = 33/116 (28%), Positives = 55/116 (46%), Gaps = 6/116 (5%)
Frame = +2
Query: 1 MIGAQALVAIPQASGSPKAYTS---NIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFAT 57
M GA+A +A P +S S A T N+ + ++ L+A N VTI+ +
Sbjct: 353 MRGAEAFLAFP-SSASASAITLGRYNLTSYKAIDEVKAFTFDSWDLAAEESNGAVTIYGS 529
Query: 58 LTLPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLV---SGTSQAASG 110
+ +P+ ++ HVWQ G +++ P HS E + +SK + T+ ASG
Sbjct: 530 VKIPDSARNVSHVWQVGPVAA-GKPGVHSFEKKNTDSKAAFPVALVGPNTTTPASG 694
>TC204255 PDB|1OD5_A.0|33357661|1OD5_A Chain A, Crystal Structure Of Glycinin
A3b4 Subunit Homohexamer. {Glycine max;} , partial (6%)
Length = 519
Score = 41.6 bits (96), Expect = 5e-04
Identities = 24/97 (24%), Positives = 50/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 1 MIGAQALVAIPQASGSPKAYTSNIVDTSTRLQEGTISYPVSG--LSATYQNNKVTIFATL 58
M GA+A +A P ++ + TS + + ++ L+A N+ +TI++++
Sbjct: 189 MRGAEAFLAFPSSAYASAITLGRYNLTSYKAIDEIKAFTFDSWDLAAEESNSAITIYSSI 368
Query: 59 TLPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSK 95
+PN ++ H+WQ G +++ P H+ E + +SK
Sbjct: 369 KIPNSARNISHIWQVGPMAT-GKPGVHNFEKKNTDSK 476
>TC215157 homologue to UP|Q93YH3 (Q93YH3) ATP citrate lyase b-subunit ,
partial (32%)
Length = 689
Score = 30.4 bits (67), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (49%)
Frame = -1
Query: 12 QASGSPKAYTSNIVDTSTRLQEGTISYPVSGLSATYQNNKVTIFATLT 59
+ +G PK N V +S + T+ + S Y+NN TI ATL+
Sbjct: 689 RGAGKPKKIDQNAVKSSNSQMKNTLYCVKTAPSEFYKNNVTTILATLS 546
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,426,778
Number of Sequences: 63676
Number of extensions: 184863
Number of successful extensions: 1056
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of query: 310
length of database: 12,639,632
effective HSP length: 97
effective length of query: 213
effective length of database: 6,463,060
effective search space: 1376631780
effective search space used: 1376631780
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC147406.4