BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147179.6 + phase: 0 /pseudo
(660 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC205929 similar to UP|Q6PQQ7 (Q6PQQ7) AP2/EREBP transcription f... 285 6e-77
TC216256 homologue to UP|Q6PQQ3 (Q6PQQ3) AP2/EREBP transcription... 247 1e-65
TC230532 weakly similar to UP|Q8LGQ3 (Q8LGQ3) Ovule development ... 199 3e-51
TC216255 homologue to UP|Q6PQQ3 (Q6PQQ3) AP2/EREBP transcription... 140 8e-37
TC216257 homologue to UP|Q6PQQ5 (Q6PQQ5) AP2/EREBP transcription... 119 6e-27
TC205405 similar to UP|Q9XHD3 (Q9XHD3) PHAP2B protein, partial (... 114 1e-25
TC205407 similar to UP|Q9XHD3 (Q9XHD3) PHAP2B protein, partial (... 113 3e-25
TC219011 homologue to UP|Q84U24 (Q84U24) LIPLESS1, partial (52%) 112 4e-25
TC232474 similar to UP|Q38914 (Q38914) CKC, partial (28%) 110 3e-24
AI444013 108 1e-23
BM885844 105 5e-23
TC208098 homologue to UP|Q9LSM4 (Q9LSM4) Gb|AAD30633.1, partial ... 100 4e-21
TC219318 similar to UP|Q76H94 (Q76H94) APETALA2-like protein 2, ... 97 2e-20
TC219010 homologue to UP|Q9AXI4 (Q9AXI4) APETAL2-like protein, p... 80 7e-20
AW567914 similar to GP|21069057|gb| BABY BOOM {Arabidopsis thali... 94 3e-19
AW568355 80 3e-15
TC212347 similar to UP|O23109 (O23109) AP2 domain containing pro... 80 4e-15
TC228902 similar to UP|Q9XHD3 (Q9XHD3) PHAP2B protein, partial (... 73 2e-13
BG881792 69 5e-12
BI316263 64 2e-10
>TC205929 similar to UP|Q6PQQ7 (Q6PQQ7) AP2/EREBP transcription factor,
partial (61%)
Length = 2009
Score = 285 bits (728), Expect = 6e-77
Identities = 200/541 (36%), Positives = 276/541 (50%), Gaps = 45/541 (8%)
Frame = +2
Query: 103 VNNNNQQAQPKLENFLGGHSFTDHQEYGGSNSYSSLHLPPHQPEASCGGGDGSTSNNNSI 162
+N ++ PK+ +FLG S S + L E D +NN+ +
Sbjct: 272 INTHSSSEVPKVADFLGV-----------SKSENESDLAASLNEIQSNDSDYLFTNNSLV 418
Query: 163 GLSMIKTWLRNQPPPPENNNNNNNESGARVQTLSLSMSTGSQSSSSVPLLNANVMSGEIS 222
+ P +N + + +Q+L+LSM +G S+ +
Sbjct: 419 PMQ--------NPAVDTPSNEYQENANSSLQSLTLSMGSGKDSTCE-------------T 535
Query: 223 SSENKQPPTTAVVLDSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDN 282
S +N TT T+ VE+A PR+++DTFGQRTSIYRGVTRHRWTGRYEAHLWDN
Sbjct: 536 SGDNSTNTTT--------TTTVEAA-PRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDN 688
Query: 283 SCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHM 342
SCRREGQ+RKGRQV++GGYDKEEKAAR+YDLAALKYWGT+TTTNFPIS+YEKE++EMKHM
Sbjct: 689 SCRREGQSRKGRQVYLGGYDKEEKAARSYDLAALKYWGTSTTTNFPISNYEKELDEMKHM 868
Query: 343 TRQEYVASLRRKSSGFSRGASIYRGVTR-----------------------------QTS 373
TRQE+VA++RRKSSGFSRGAS+YRGVTR + +
Sbjct: 869 TRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAA 1048
Query: 374 STW*MAS*DWKSCRQQRSLPRNFQYDVKTILESSTLPI-GGAAKRLKDMEQVELNHVNVD 432
+ +A+ ++ + + +YDVK ILES+TLPI GGAAKRLK+ + +E
Sbjct: 1049EAYDIAAIKFRGLNAVTNFDMS-RYDVKAILESNTLPIGGGAAKRLKEAQALE------- 1204
Query: 433 ISHRTEQDHSIINNTSHLTEQAIYAATNASNWHALSFQHQQPHHHYNANN--MQLQNYPY 490
S R ++ + +++ T +SN ++ Q HH + + LQN+
Sbjct: 1205-SSRKREEMIALGSST------FQYGTTSSNSRLHAYPLMQHHHQFEQPQPLLTLQNHDI 1363
Query: 491 GTQTQKLWCKQEQDSDDHSTYTTATDIHQLQLG--------NNNNNT---HNFFGLQN-- 537
+ +QD T +HQ Q G NNN N +N + LQN
Sbjct: 1364SSH-----FSHQQDPLHQGYIQTQLQLHQQQSGGSSSYSFQNNNINNAQFYNGYNLQNHP 1528
Query: 538 IMSMDSASMDNSSGSNSVVYGGGDHGGYGGNGGYMIPMAIANDGNQNPRSNNNFGESEIK 597
+ +M +SS S+ + ++ GG G MA N S N G +E
Sbjct: 1529ALLQGMINMGSSSSSSVLENNNSNNNNVGGFVGSGFGMA------SNATSGNTVGTAEEL 1690
Query: 598 G 598
G
Sbjct: 1691G 1693
Score = 30.0 bits (66), Expect = 3.4
Identities = 29/143 (20%), Positives = 63/143 (43%), Gaps = 1/143 (0%)
Frame = +2
Query: 68 YEAFHTNNNIHTTQDWKENYNNQNLLLGTSCMNQNVNNN-NQQAQPKLENFLGGHSFTDH 126
Y +N+ +H + ++ + + N +++++ + Q P + ++
Sbjct: 1256 YGTTSSNSRLHAYPLMQHHHQFEQPQPLLTLQNHDISSHFSHQQDPLHQGYIQTQLQLHQ 1435
Query: 127 QEYGGSNSYSSLHLPPHQPEASCGGGDGSTSNNNSIGLSMIKTWLRNQPPPPENNNNNNN 186
Q+ GGS+SYS + + + G + N+ ++ MI + ENNN+NNN
Sbjct: 1436 QQSGGSSSYSFQNNNINNAQFYNGY---NLQNHPALLQGMINMGSSSSSSVLENNNSNNN 1606
Query: 187 ESGARVQTLSLSMSTGSQSSSSV 209
G V + M++ + S ++V
Sbjct: 1607 NVGGFVGS-GFGMASNATSGNTV 1672
>TC216256 homologue to UP|Q6PQQ3 (Q6PQQ3) AP2/EREBP transcription factor,
partial (35%)
Length = 1475
Score = 247 bits (630), Expect = 1e-65
Identities = 152/356 (42%), Positives = 202/356 (56%), Gaps = 42/356 (11%)
Frame = +3
Query: 241 TSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGG 300
T+ + P+K+VDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ+RKGRQV++GG
Sbjct: 372 TTEPQKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGG 551
Query: 301 YDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSR 360
YDKE+KAARAYDLAALKYWG TTTTNFPIS+YEKE+EEMK+MTRQE+VASLRRKSSGFSR
Sbjct: 552 YDKEDKAARAYDLAALKYWGPTTTTNFPISNYEKELEEMKNMTRQEFVASLRRKSSGFSR 731
Query: 361 GASIYRGVTR-----------------------------QTSSTW*MAS*DWKSCRQQRS 391
GASIYRGVTR + + + +A+ ++ +
Sbjct: 732 GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTN 911
Query: 392 LPRNFQYDVKTILESSTLPIGGAAKRLKDMEQVELNHVNVDISHRTEQDHSIINNTSHLT 451
+ +YDVK+I +STLPIGG + + K+ + + S E+D S ++ + +
Sbjct: 912 FDMS-RYDVKSI-ANSTLPIGGLSGKNKNSTDSASESKSHEASRSDERDPSAASSVTFAS 1085
Query: 452 EQ---------AIYAATNASNWHALSFQHQQPHHHYNANNMQLQNYPYGTQTQKLWCKQE 502
+Q AI + S++ ++ H P +N ++N T T
Sbjct: 1086QQQPSSSTLSFAIPIKQDPSDYWSILGYHNSP-----LDNTGIRNTTSVTAT-------S 1229
Query: 503 QDSDDHSTYTTATDIH----QLQLGNNNNNTHNFFGLQNIMSMDSASMDNSSGSNS 554
S ++ T ++ T H ++N FF I + N GS S
Sbjct: 1230FPSSNNGTTSSLTPFHMEFSNAPTSTGSDNDAAFFSGGGIFVQQQSGHGNGHGSGS 1397
>TC230532 weakly similar to UP|Q8LGQ3 (Q8LGQ3) Ovule development
aintegumenta-like protein BNM3, partial (6%)
Length = 950
Score = 199 bits (506), Expect = 3e-51
Identities = 124/231 (53%), Positives = 148/231 (63%), Gaps = 29/231 (12%)
Frame = +1
Query: 459 TNASNWH-ALSFQHQQPHHHYNANNMQLQNYPYGTQTQKLWCKQEQDSDDHSTYTTATDI 517
T+ NWH AL+F QP +YPYG + WCKQEQD+ D S + +DI
Sbjct: 25 THHHNWHNALAFHQPQP--------CTTIHYPYGQRIN--WCKQEQDNSDASHSLSYSDI 174
Query: 518 HQLQLGNNNNNTHNFF----GLQNIMSMDSASMDNSSGSNSVVYGGGDHGGYGGNGGY-M 572
HQLQLGNN THNFF GL ++SMDSAS+DNSS SNSVVY G YGG GGY +
Sbjct: 175 HQLQLGNNG--THNFFHTNSGLHPMLSMDSASIDNSSSSNSVVYDG-----YGGGGGYNV 333
Query: 573 IPMA-----IANDGNQNPRSNNNFGESEIKGFGYENVFGTTTDPYHAQAARNLYYQPQQ- 626
IPM +ANDG+QNPRSN+ FG++EIK GYE+V+G+TTDPYHA ARNLYY QQ
Sbjct: 334 IPMGTTTTVVANDGDQNPRSNHGFGDNEIKALGYESVYGSTTDPYHAH-ARNLYYLTQQQ 510
Query: 627 ---------LSVDQGS---NWVPTAIPTLAPR-TTNVSLC----PPFTLLH 660
+ DQGS WVPTAIPT APR TT+++LC PF+LLH
Sbjct: 511 PSSVDTVKASAYDQGSACNTWVPTAIPTHAPRSTTSMALCHGATTPFSLLH 663
>TC216255 homologue to UP|Q6PQQ3 (Q6PQQ3) AP2/EREBP transcription factor,
partial (22%)
Length = 437
Score = 140 bits (354), Expect(2) = 8e-37
Identities = 67/75 (89%), Positives = 74/75 (98%)
Frame = +1
Query: 296 VFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKS 355
V++GGYDKE+KAARAYDLAALKYWG TTTTNFPIS+YEKE+EEMK+MTRQE+VASLRRKS
Sbjct: 61 VYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYEKELEEMKNMTRQEFVASLRRKS 240
Query: 356 SGFSRGASIYRGVTR 370
SGFSRGASIYRGVTR
Sbjct: 241 SGFSRGASIYRGVTR 285
Score = 57.4 bits (137), Expect = 2e-08
Identities = 29/77 (37%), Positives = 44/77 (56%)
Frame = +1
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAAR 309
R+ F + SIYRGVTRH GR++A R G+ + +++G + +E+AA
Sbjct: 229 RRKSSGFSRGASIYRGVTRHHQHGRWQA--------RIGRVAGNKDLYLGTFSTQEEAAE 384
Query: 310 AYDLAALKYWGTTTTTN 326
AYD+AA+K+ G TN
Sbjct: 385 AYDIAAIKFRGLNAVTN 435
Score = 32.0 bits (71), Expect(2) = 8e-37
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 371 QTSSTW*MAS*DWKSCRQQRSLPRNFQY 398
+T W MA + +SCR+QR LP NFQ+
Sbjct: 282 ETPPAWPMAGENRQSCRKQRPLPWNFQH 365
>TC216257 homologue to UP|Q6PQQ5 (Q6PQQ5) AP2/EREBP transcription factor,
partial (12%)
Length = 695
Score = 119 bits (297), Expect = 6e-27
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 236 LDSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQ 295
L + Q++ + P+K+VDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ+RKGRQ
Sbjct: 490 LAAEQSTEPQKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 669
Query: 296 VFVGGYDK 303
V++GGYDK
Sbjct: 670 VYLGGYDK 693
>TC205405 similar to UP|Q9XHD3 (Q9XHD3) PHAP2B protein, partial (46%)
Length = 1371
Score = 114 bits (285), Expect = 1e-25
Identities = 60/140 (42%), Positives = 88/140 (62%)
Frame = +3
Query: 237 DSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQV 296
+ QT +KS R+S YRGVT +R TGR+E+H+WD C G+QV
Sbjct: 87 NQTQTRTQTQQPAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWD--C--------GKQV 236
Query: 297 FVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSS 356
++GG+D AARAYD AA+K+ G NF +S YE ++++M++++++E+V LRR+S+
Sbjct: 237 YLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMQNLSKEEFVHILRRQST 416
Query: 357 GFSRGASIYRGVTRQTSSTW 376
GFSRG+S YRGVT W
Sbjct: 417 GFSRGSSKYRGVTLHKCGRW 476
>TC205407 similar to UP|Q9XHD3 (Q9XHD3) PHAP2B protein, partial (46%)
Length = 954
Score = 113 bits (282), Expect = 3e-25
Identities = 57/118 (48%), Positives = 81/118 (68%)
Frame = +1
Query: 259 RTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKY 318
R+S YRGVT +R TGR+E+H+WD C G+QV++GG+D AARAYD AA+K+
Sbjct: 76 RSSQYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTAHIAARAYDRAAIKF 225
Query: 319 WGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRQTSSTW 376
G NF + YE+++++MK++++QE+V LRR S+GFSRG+S YRGVT W
Sbjct: 226 RGLDADINFNLVDYEEDLKQMKNLSKQEFVHILRRHSTGFSRGSSKYRGVTLHKCGRW 399
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/88 (39%), Positives = 49/88 (54%)
Frame = +1
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAAR 309
R+ F + +S YRGVT H+ GR+EA R GQ + +++G +D E +AAR
Sbjct: 325 RRHSTGFSRGSSKYRGVTLHK-CGRWEA--------RMGQFLGKKYIYLGLFDSEVEAAR 477
Query: 310 AYDLAALKYWGTTTTTNFPISHYEKEVE 337
AYD AA+K TNF S YE E++
Sbjct: 478 AYDKAAIKCNRREAVTNFEPSTYESEMK 561
>TC219011 homologue to UP|Q84U24 (Q84U24) LIPLESS1, partial (52%)
Length = 1310
Score = 112 bits (281), Expect = 4e-25
Identities = 56/118 (47%), Positives = 80/118 (67%)
Frame = +3
Query: 259 RTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKY 318
R+S YRGVT +R TGR+E+H+WD C G+QV++GG+D AARAYD AA+K+
Sbjct: 702 RSSQYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTAHAAARAYDRAAIKF 851
Query: 319 WGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRQTSSTW 376
G NF I YE+++++M ++T++E+V LRR+S+GF RG+S YRGVT W
Sbjct: 852 RGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRW 1025
Score = 43.9 bits (102), Expect = 2e-04
Identities = 33/82 (40%), Positives = 43/82 (52%)
Frame = +3
Query: 248 VPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKA 307
V R+ F + +S YRGVT H+ GR+EA R GQ + V++G D E +A
Sbjct: 945 VLRRQSTGFPRGSSKYRGVTLHK-CGRWEA--------RMGQFLGKKYVYLGLVDTEIEA 1097
Query: 308 ARAYDLAALKYWGTTTTTNFPI 329
ARAYD AA+K G F I
Sbjct: 1098 ARAYDKAAIKCNGKKACHQFLI 1163
>TC232474 similar to UP|Q38914 (Q38914) CKC, partial (28%)
Length = 998
Score = 110 bits (274), Expect = 3e-24
Identities = 52/65 (80%), Positives = 59/65 (90%)
Frame = +2
Query: 305 EKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASI 364
EKAARAYDLAALKYWG +T NFP+ +Y+ E+EEMK+MTRQEYVA LRRKSSGFSRGAS+
Sbjct: 2 EKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASM 181
Query: 365 YRGVT 369
YRGVT
Sbjct: 182 YRGVT 196
Score = 60.5 bits (145), Expect = 2e-09
Identities = 31/87 (35%), Positives = 50/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 250 RKSVDTFGQRTSIYRGVT-RHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAA 308
R+ F + S+YRGVT RH GR++A + G+ + +++G + +E+AA
Sbjct: 143 RRKSSGFSRGASMYRGVTSRHHQHGRWQARI--------GRVAGNKDLYLGTFSTQEEAA 298
Query: 309 RAYDLAALKYWGTTTTTNFPISHYEKE 335
AYD+AA+K+ G TNF I+ Y+ E
Sbjct: 299 EAYDIAAIKFRGANAVTNFDITRYDVE 379
Score = 28.5 bits (62), Expect = 10.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 352 RRKSSGFSRGASIYRGVTRQTSSTW*MAS*DWKSCRQQRSLPRNFQY 398
++K RG + R +QT TW +AS +W S +QRS+ N Y
Sbjct: 145 KKKQRILKRGFHVQRS-NKQTPPTWKVASSNW*SGWKQRSISWNL*Y 282
>AI444013
Length = 397
Score = 108 bits (269), Expect = 1e-23
Identities = 52/67 (77%), Positives = 60/67 (88%)
Frame = +3
Query: 304 EEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGAS 363
+EKAARAYDLAALKYWG +T NF I +Y+ ++EEMK+M+RQEYVA LRRKSSGFSRGAS
Sbjct: 3 QEKAARAYDLAALKYWGPSTHINFSIENYQVQLEEMKNMSRQEYVAHLRRKSSGFSRGAS 182
Query: 364 IYRGVTR 370
IYRGVTR
Sbjct: 183 IYRGVTR 203
Score = 58.2 bits (139), Expect = 1e-08
Identities = 31/86 (36%), Positives = 46/86 (53%)
Frame = +3
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAAR 309
R+ F + SIYRGVTRH GR++A + G+ + + + +E+AA
Sbjct: 147 RRKSSGFSRGASIYRGVTRHHQHGRWQARI--------GRVAGNKDLXPWTFSTQEEAAE 302
Query: 310 AYDLAALKYWGTTTTTNFPISHYEKE 335
AYD+A +K+ G T+ TNF IS E
Sbjct: 303 AYDVAXIKFRGATSVTNFDISRLHVE 380
Score = 28.5 bits (62), Expect = 10.0
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 352 RRKSSGFSRGASIYRGVTRQTSSTW*MAS*DWKSCRQQRSLPRNFQY 398
++K F R +I RG + S TW MAS D +SC +QR + Q+
Sbjct: 149 KKKQRVF*RCFNIQRG--HKASPTWKMASEDRQSCWEQRPXTLDVQH 283
>BM885844
Length = 420
Score = 105 bits (263), Expect = 5e-23
Identities = 50/81 (61%), Positives = 65/81 (79%)
Frame = +3
Query: 296 VFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKS 355
V++G YD EE AARAYDLAALKYWG T NFP++ Y +++EEM++++R+EY+ASLRRKS
Sbjct: 6 VYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKS 185
Query: 356 SGFSRGASIYRGVTRQTSSTW 376
SGFSRG + YRG+ SS W
Sbjct: 186 SGFSRGLAKYRGL----SSRW 236
>TC208098 homologue to UP|Q9LSM4 (Q9LSM4) Gb|AAD30633.1, partial (30%)
Length = 985
Score = 99.8 bits (247), Expect = 4e-21
Identities = 58/127 (45%), Positives = 78/127 (60%), Gaps = 29/127 (22%)
Frame = +3
Query: 322 TTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTR----------- 370
T TTNFP+S+Y KEVEEMKH+T+QE++ASLRRKSSGFSRGASIYRGVTR
Sbjct: 3 TATTNFPVSNYSKEVEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARI 182
Query: 371 ------------------QTSSTW*MAS*DWKSCRQQRSLPRNFQYDVKTILESSTLPIG 412
+ + + +A+ ++ + N +YDV+ I++SS LP+G
Sbjct: 183 GRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMN-RYDVEAIMKSS-LPVG 356
Query: 413 GAAKRLK 419
GAAKRL+
Sbjct: 357 GAAKRLR 377
Score = 65.9 bits (159), Expect = 6e-11
Identities = 32/86 (37%), Positives = 50/86 (57%)
Frame = +3
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAAR 309
R+ F + SIYRGVTRH GR++A + G+ + +++G + EE+AA
Sbjct: 93 RRKSSGFSRGASIYRGVTRHHQQGRWQARI--------GRVAGNKDLYLGTFATEEEAAE 248
Query: 310 AYDLAALKYWGTTTTTNFPISHYEKE 335
AYD+AA+K+ G TNF ++ Y+ E
Sbjct: 249 AYDIAAIKFRGANAVTNFEMNRYDVE 326
>TC219318 similar to UP|Q76H94 (Q76H94) APETALA2-like protein 2, partial
(21%)
Length = 1304
Score = 97.1 bits (240), Expect = 2e-20
Identities = 49/109 (44%), Positives = 77/109 (69%)
Frame = +2
Query: 259 RTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKY 318
R+S YRGVT +R TGR+E+H+WD C G+QV++GG+D + AARAYD AA+K+
Sbjct: 755 RSSQYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTAQAAARAYDRAAIKF 904
Query: 319 WGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRG 367
G NF +S YE+++++M+ ++++E+V LRR+ +G SR +S Y+G
Sbjct: 905 RGVEADINFSLSDYEEDLKQMRGLSKEEFVLLLRRQINGSSR-SSTYKG 1048
>TC219010 homologue to UP|Q9AXI4 (Q9AXI4) APETAL2-like protein, partial (35%)
Length = 766
Score = 80.5 bits (197), Expect(2) = 7e-20
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = +1
Query: 299 GGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGF 358
GG+D AARAYD AA+K+ G NF I YE+++++M ++T++E+V LRR+S+GF
Sbjct: 505 GGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLRRQSTGF 684
Query: 359 SRGASIYRGVTRQTSSTW 376
RG+S YRGVT W
Sbjct: 685 PRGSSKYRGVTLHKCGRW 738
Score = 35.4 bits (80), Expect(2) = 7e-20
Identities = 14/22 (63%), Positives = 19/22 (85%)
Frame = +3
Query: 259 RTSIYRGVTRHRWTGRYEAHLW 280
R+S YRGVT +R TGR+E+H+W
Sbjct: 441 RSSQYRGVTFYRRTGRWESHIW 506
>AW567914 similar to GP|21069057|gb| BABY BOOM {Arabidopsis thaliana},
partial (8%)
Length = 165
Score = 93.6 bits (231), Expect = 3e-19
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +2
Query: 298 VGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVAS 350
+GGYDKEEKAA+AYDLAALKYWG TT NFP+S YEKE+EEMKHMTRQE VA+
Sbjct: 5 LGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQELVAN 163
>AW568355
Length = 412
Score = 80.1 bits (196), Expect = 3e-15
Identities = 36/63 (57%), Positives = 46/63 (72%)
Frame = +2
Query: 251 KSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARA 310
+S T R+S +RGV+RHRWTGR+EAHLWD Q +KG+QV++G Y+ EE AARA
Sbjct: 224 QSTATTVNRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARA 403
Query: 311 YDL 313
YDL
Sbjct: 404 YDL 412
>TC212347 similar to UP|O23109 (O23109) AP2 domain containing protein RAP2.7
(Fragment), partial (19%)
Length = 618
Score = 79.7 bits (195), Expect = 4e-15
Identities = 34/75 (45%), Positives = 57/75 (75%)
Frame = +1
Query: 293 GRQVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLR 352
G+QV++GG+D + AARAYD AA+K+ G NF +S YE+++++M++++++E+V LR
Sbjct: 295 GKQVYLGGFDTAQAAARAYDRAAIKFRGVDADINFSLSDYEEDLKQMRNLSKEEFVLLLR 474
Query: 353 RKSSGFSRGASIYRG 367
R+ +G SR +S YRG
Sbjct: 475 RQINGISRRSSTYRG 519
>TC228902 similar to UP|Q9XHD3 (Q9XHD3) PHAP2B protein, partial (36%)
Length = 1242
Score = 72.8 bits (177), Expect(2) = 2e-13
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +2
Query: 309 RAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGV 368
RAYD AA+K+ G NF +S Y++++++M + T++E+V LRR+S+GFSRG+S YRGV
Sbjct: 50 RAYDRAAIKFRGVDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGV 229
Query: 369 TRQTSSTW 376
T W
Sbjct: 230 TLHKCGRW 253
Score = 58.2 bits (139), Expect = 1e-08
Identities = 40/99 (40%), Positives = 53/99 (53%)
Frame = +2
Query: 238 SNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVF 297
SN T + R+ F + +S YRGVT H+ GR+EA R GQ + ++
Sbjct: 143 SNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHK-CGRWEA--------RMGQFLGKKYIY 295
Query: 298 VGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEV 336
+G +D E +AARAYD AA+K G TNF S YE EV
Sbjct: 296 LGLFDSELEAARAYDKAAIKCNGREAVTNFEPSFYEGEV 412
Score = 21.2 bits (43), Expect(2) = 2e-13
Identities = 7/15 (46%), Positives = 11/15 (72%)
Frame = +3
Query: 293 GRQVFVGGYDKEEKA 307
G+QV++GG+D A
Sbjct: 3 GKQVYLGGFDTAHAA 47
>BG881792
Length = 304
Score = 69.3 bits (168), Expect = 5e-12
Identities = 51/101 (50%), Positives = 57/101 (55%), Gaps = 28/101 (27%)
Frame = +2
Query: 354 KSSGFSRGASIYRGVTRQ----------------------TSSTW*MAS*DWKSCR---Q 388
KSSGFSRGASIYRGVTR T ST A+ + +
Sbjct: 2 KSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFR 181
Query: 389 QRSLPRNF---QYDVKTILESSTLPIGGAAKRLKDMEQVEL 426
S NF +YDVK+ILES+TLPIGGAAKRLKDMEQVEL
Sbjct: 182 GLSAVTNFDMSRYDVKSILESTTLPIGGAAKRLKDMEQVEL 304
Score = 63.5 bits (153), Expect = 3e-10
Identities = 30/78 (38%), Positives = 48/78 (61%)
Frame = +2
Query: 256 FGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAA 315
F + SIYRGVTRH GR++A + G+ + +++G + +E+AA AYD+AA
Sbjct: 14 FSRGASIYRGVTRHHQHGRWQARI--------GRVAGNKDLYLGTFSTQEEAAEAYDVAA 169
Query: 316 LKYWGTTTTTNFPISHYE 333
+K+ G + TNF +S Y+
Sbjct: 170 IKFRGLSAVTNFDMSRYD 223
>BI316263
Length = 416
Score = 63.9 bits (154), Expect = 2e-10
Identities = 31/34 (91%), Positives = 33/34 (96%)
Frame = +1
Query: 337 EEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTR 370
EEMK+M+RQEYVA LRRKSSGFSRGASIYRGVTR
Sbjct: 1 EEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTR 102
Score = 32.7 bits (73), Expect = 0.53
Identities = 14/30 (46%), Positives = 19/30 (62%)
Frame = +1
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHL 279
R+ F + SIYRGVTRH GR++A +
Sbjct: 46 RRKSSGFSRGASIYRGVTRHHQHGRWQARI 135
Score = 31.6 bits (70), Expect = 1.2
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 352 RRKSSGFSRGASIYRGVTRQTSSTW*MAS*DWKSCRQQRSLP 393
++K F R +I RG + S TW MAS D +SC +QR LP
Sbjct: 48 KKKQRVF*RCFNIQRG--HKASPTWKMASEDRQSCWEQRPLP 167
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.128 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,059,647
Number of Sequences: 63676
Number of extensions: 544418
Number of successful extensions: 4829
Number of sequences better than 10.0: 239
Number of HSP's better than 10.0 without gapping: 3851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4434
length of query: 660
length of database: 12,639,632
effective HSP length: 103
effective length of query: 557
effective length of database: 6,081,004
effective search space: 3387119228
effective search space used: 3387119228
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Medicago: description of AC147179.6