BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147178.7 + phase: 0
(379 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CO983185 392 e-109
TC235093 similar to UP|Q8MZ21 (Q8MZ21) RE13473p, partial (8%) 132 3e-31
TC231779 weakly similar to UP|Q9SGV7 (Q9SGV7) F1N19.15, partial ... 92 4e-19
CD392158 89 3e-18
AW132315 weakly similar to GP|6630464|gb| F23N19.4 {Arabidopsis ... 72 4e-13
TC210974 similar to UP|Q6K9W7 (Q6K9W7) Pentatricopeptide (PPR) r... 71 7e-13
AI965634 70 1e-12
AW507532 69 3e-12
TC209869 similar to UP|Q9LG03 (Q9LG03) F20N2.6, partial (33%) 69 5e-12
TC219923 similar to UP|Q9FMF6 (Q9FMF6) Gb|AAF15929.1, partial (10%) 68 8e-12
TC223148 67 1e-11
TC231968 67 2e-11
TC232587 similar to UP|Q9LME0 (Q9LME0) F14D16.2, partial (17%) 65 5e-11
BI424784 weakly similar to GP|21741712|em oj991113_30.17 {Oryza ... 64 1e-10
TC213874 similar to GB|BAC92425.1|35215067|AP004458 chloroplast ... 62 4e-10
BI787490 62 4e-10
TC230247 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g6... 61 7e-10
TC222623 similar to UP|Q9LIL5 (Q9LIL5) Gb|AAF27119.1, partial (36%) 59 4e-09
AI736610 59 5e-09
TC230477 58 6e-09
>CO983185
Length = 747
Score = 392 bits (1008), Expect = e-109
Identities = 200/251 (79%), Positives = 214/251 (84%)
Frame = -1
Query: 124 RIDLGFQGRNVAETGRDGGQSGDSFLDKFKFDFDDKIGSQSDVEASSQLEEARAVNSSNF 183
+IDL FQ NVA+T RD GQSGDSFL+KFK FDDK + S+V AS Q EEA+ SN
Sbjct: 744 KIDLAFQNTNVAKTNRDAGQSGDSFLNKFKLGFDDKTVNLSEVAASKQSEEAKR---SNP 574
Query: 184 NQPAQESMPQDADAIFNKMKETGLIPNAVAMLDGLCKDGNFQEALKLFGLMREKGTIPDI 243
NQPAQESMPQDAD IF KMKETGLIPNAVAMLDGLCKDG QEALKLFGLMREKGTIP+I
Sbjct: 573 NQPAQESMPQDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEI 394
Query: 244 VIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVE 303
VIYTAVV+GYTKAHKADDA RIFRKMQS+ +SPNAFSY VLIQGLYKCS+LHDA EFCVE
Sbjct: 393 VIYTAVVEGYTKAHKADDAKRIFRKMQSSGVSPNAFSYMVLIQGLYKCSRLHDAFEFCVE 214
Query: 304 MLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFDEKAVRVFLDKKAPFSP 363
MLEAGHS NVTTFVGLVDGFC E G+EEAK IKTL KGF +EKAVR FLDKKAPFS
Sbjct: 213 MLEAGHSPNVTTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQFLDKKAPFST 34
Query: 364 SIWEAIFGKKA 374
S+WEAIFGKKA
Sbjct: 33 SVWEAIFGKKA 1
>TC235093 similar to UP|Q8MZ21 (Q8MZ21) RE13473p, partial (8%)
Length = 967
Score = 132 bits (332), Expect = 3e-31
Identities = 72/196 (36%), Positives = 123/196 (62%), Gaps = 8/196 (4%)
Frame = +2
Query: 185 QPAQE---SMPQDADAIFNKMKE-TGLIPNAVAMLDGLCKDGNFQEALKLFGLMREKGTI 240
+PA E S P+D IF+ M+ GL +AV M D L K+G EAL+LF +++KG +
Sbjct: 236 KPAVEDPSSDPKDLQQIFHNMRTGDGLFSHAVKMFDALSKEGLTHEALELFAQIKDKGHM 415
Query: 241 PDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSK---LHDA 297
PD+V +TAV++ Y A + +A++++ +M ++ +SPNA++Y VLI+GL + + +A
Sbjct: 416 PDVVAHTAVLEAYANAAQPKEALKVYMRMLASGVSPNAYTYAVLIKGLAAAADVKFVKEA 595
Query: 298 VEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFDEKAVR-VFLD 356
++ +EM++ G NV T+ + +G +E ++EA +++ + GKGF DEKAVR V
Sbjct: 596 SKYVLEMMDKGMKPNVQTYACVFEGLVREEKLDEAARLLEQMKGKGFVPDEKAVREVLAS 775
Query: 357 KKAPFSPSIWEAIFGK 372
K+ P ++ + +FGK
Sbjct: 776 KRGPVFRNVIDVLFGK 823
>TC231779 weakly similar to UP|Q9SGV7 (Q9SGV7) F1N19.15, partial (7%)
Length = 620
Score = 92.0 bits (227), Expect = 4e-19
Identities = 47/135 (34%), Positives = 73/135 (53%), Gaps = 3/135 (2%)
Frame = +1
Query: 201 KMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAH 257
+M ++P+ V +++DGLCK G AL L M +G D+V YT+++D K
Sbjct: 4 EMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQ 183
Query: 258 KADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFV 317
D A +F KM+ I P ++YT LI GL K +L +A E +L G ++V T+
Sbjct: 184 NHDKATALFMKMKKRRIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYT 363
Query: 318 GLVDGFCKENGIEEA 332
++ G CKE ++EA
Sbjct: 364 VMISGLCKEGMLDEA 408
Score = 68.2 bits (165), Expect = 6e-12
Identities = 41/149 (27%), Positives = 78/149 (51%), Gaps = 3/149 (2%)
Frame = +1
Query: 198 IFNKMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYT 254
+ N+M G + V ++LD LCK+ N +A LF M+++ P + YTA++DG
Sbjct: 100 LMNEMHHRGQPADVVTYTSLLDALCKNQNHDKATALFMKMKKRRIQPTMYTYTALIDGLC 279
Query: 255 KAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVT 314
K + +A +F+ + + ++YTV+I GL K L +A+ +M + G N
Sbjct: 280 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMLDEALAMKSKMEDNGCIPNAV 459
Query: 315 TFVGLVDGFCKENGIEEAKGVIKTLIGKG 343
TF ++ +++ ++A+ ++ +I KG
Sbjct: 460 TFEIIIRSLFEKDENDKAEKILHEMIAKG 546
>CD392158
Length = 704
Score = 89.0 bits (219), Expect = 3e-18
Identities = 48/140 (34%), Positives = 76/140 (54%)
Frame = -2
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
++DGL K G + A++L MR KG PDI+ Y+ ++ G + K D+AI+IF M+ S
Sbjct: 652 VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLS 473
Query: 274 ISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAK 333
I P+A +Y ++ GL K + A++F M+E G T+ L++G E EEA
Sbjct: 472 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEAL 293
Query: 334 GVIKTLIGKGFAFDEKAVRV 353
++ L +GF A +V
Sbjct: 292 ELLNELCSRGFVKKSSAEQV 233
Score = 42.7 bits (99), Expect = 3e-04
Identities = 26/102 (25%), Positives = 49/102 (47%), Gaps = 3/102 (2%)
Frame = -2
Query: 188 QESMPQDADAIFNKMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIV 244
+E +A IF+ M+ + P+AV A++ GLCK A+ M EKG P
Sbjct: 529 REGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEA 350
Query: 245 IYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQ 286
YT +++G A++A+ + ++ S + + V+++
Sbjct: 349 TYTILIEGIADEGLAEEALELLNELCSRGFVKKSSAEQVVVK 224
>AW132315 weakly similar to GP|6630464|gb| F23N19.4 {Arabidopsis thaliana},
partial (5%)
Length = 411
Score = 72.0 bits (175), Expect = 4e-13
Identities = 37/130 (28%), Positives = 68/130 (51%), Gaps = 3/130 (2%)
Frame = +3
Query: 198 IFNKMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYT 254
+ K+++ + P+ V ++D LCKD EA + M +G PD++ YT ++ G
Sbjct: 18 LLRKIEDRSIRPDVVMYSTIIDSLCKDKLVNEAYDFYSEMDARGIFPDVITYTTLICGXC 197
Query: 255 KAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVT 314
A + A + +M +I+P+ ++++LI L K K+ +A M++ G NV
Sbjct: 198 LASQLMGAFSLLNEMILKNINPDVHTFSILIDALCKEGKVKEAKNLLAVMMKEGVKPNVV 377
Query: 315 TFVGLVDGFC 324
T+ L+DG+C
Sbjct: 378 TYNTLMDGYC 407
Score = 68.9 bits (167), Expect = 3e-12
Identities = 35/117 (29%), Positives = 63/117 (52%)
Frame = +3
Query: 227 ALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQ 286
A+KL + ++ PD+V+Y+ ++D K ++A + +M + I P+ +YT LI
Sbjct: 9 AIKLLRKIEDRSIRPDVVMYSTIIDSLCKDKLVNEAYDFYSEMDARGIFPDVITYTTLIC 188
Query: 287 GLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKG 343
G S+L A EM+ + +V TF L+D CKE ++EAK ++ ++ +G
Sbjct: 189 GXCLASQLMGAFSLLNEMILKNINPDVHTFSILIDALCKEGKVKEAKNLLAVMMKEG 359
>TC210974 similar to UP|Q6K9W7 (Q6K9W7) Pentatricopeptide (PPR)
repeat-containing protein-like, partial (3%)
Length = 637
Score = 71.2 bits (173), Expect = 7e-13
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Frame = +2
Query: 198 IFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYT 254
+F +M + G+ P A +LD G ++A +F MR PD+ YT ++ Y
Sbjct: 2 VFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYI 181
Query: 255 KAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVT 314
A + A + F+++ + PN +Y LI+G K + L ++ EML G N T
Sbjct: 182 NADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQT 361
Query: 315 TFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFDEKAVRVFL 355
++D + K + A K + G D+KA V L
Sbjct: 362 ILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLL 484
>AI965634
Length = 415
Score = 70.5 bits (171), Expect = 1e-12
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Frame = +2
Query: 200 NKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKA 256
+K+ + GL PN V +++G C A++LF ++ G P +V Y ++ GY+K
Sbjct: 5 DKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKV 184
Query: 257 HKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTF 316
A+ + ++M+ I+P+ +YT+LI + + A E M ++G +V T+
Sbjct: 185 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTY 364
Query: 317 VGLVDGFCKENGIEEA 332
L+ G C ++EA
Sbjct: 365 SVLLHGLCVHGNMKEA 412
>AW507532
Length = 396
Score = 69.3 bits (168), Expect = 3e-12
Identities = 33/109 (30%), Positives = 60/109 (54%)
Frame = +3
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
+L G+ A++ + M+ +G +PD+V Y +++GY + K D+A ++F +M+
Sbjct: 66 LLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRD 245
Query: 274 ISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDG 322
I PN S+T +++G ++ DA++ EM G NV TF L+ G
Sbjct: 246 IVPNVISFTTMLKGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPG 392
Score = 62.4 bits (150), Expect = 3e-10
Identities = 27/93 (29%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +3
Query: 199 FNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTK 255
+ MK G++P+ V +++G + EA KLF M+ + +P+++ +T ++ GY
Sbjct: 117 YEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVA 296
Query: 256 AHKADDAIRIFRKMQSNSISPNAFSYTVLIQGL 288
A + DDA+++F +M+ + PN +++ L+ GL
Sbjct: 297 AGRIDDALKVFEEMKGCGVKPNVVTFSTLLPGL 395
>TC209869 similar to UP|Q9LG03 (Q9LG03) F20N2.6, partial (33%)
Length = 1085
Score = 68.6 bits (166), Expect = 5e-12
Identities = 42/148 (28%), Positives = 67/148 (44%), Gaps = 3/148 (2%)
Frame = +1
Query: 198 IFNKMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYT 254
+ N M+E G+ P + ++DGL + GN F M + PD+V YT ++ GY
Sbjct: 142 LLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNECRPDVVAYTVMITGYV 321
Query: 255 KAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVT 314
A + + A+ +++ M S PN F+Y +I+GL K +A EM G S N
Sbjct: 322 VAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACSMLKEMETKGCSPNSV 501
Query: 315 TFVGLVDGFCKENGIEEAKGVIKTLIGK 342
+ L +A VI+ + K
Sbjct: 502 VYNTLASCLRNAGKTADAHEVIRQMTEK 585
Score = 65.9 bits (159), Expect = 3e-11
Identities = 35/117 (29%), Positives = 58/117 (48%)
Frame = +1
Query: 227 ALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQ 286
AL L MRE G P ++ +T ++DG ++A D F +M N P+ +YTV+I
Sbjct: 133 ALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNECRPDVVAYTVMIT 312
Query: 287 GLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKG 343
G ++ A+E +M+ NV T+ ++ G C +EA ++K + KG
Sbjct: 313 GYVVAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACSMLKEMETKG 483
>TC219923 similar to UP|Q9FMF6 (Q9FMF6) Gb|AAF15929.1, partial (10%)
Length = 1238
Score = 67.8 bits (164), Expect = 8e-12
Identities = 38/132 (28%), Positives = 66/132 (49%), Gaps = 3/132 (2%)
Frame = +1
Query: 198 IFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYT 254
+F +M G+ P ++ ++ GLC+ G +ALK M +G PDIV Y ++++G
Sbjct: 148 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 327
Query: 255 KAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVT 314
K +A +F K+QS I P+A +Y LI +DA + +++G N
Sbjct: 328 KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEV 507
Query: 315 TFVGLVDGFCKE 326
T+ L++ K+
Sbjct: 508 TWSILINYIVKK 543
Score = 37.0 bits (84), Expect = 0.015
Identities = 22/65 (33%), Positives = 31/65 (46%)
Frame = +2
Query: 280 SYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTL 339
+YT+LI G K +L +A E M G SLN + L+ CK+ +K
Sbjct: 2 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD------WDCLKKC 163
Query: 340 IGKGF 344
+GKGF
Sbjct: 164 LGKGF 178
Score = 32.0 bits (71), Expect = 0.47
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 315 TFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFD 347
T+ L++GFCK+ +EEA ++ ++ KG + +
Sbjct: 2 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN 100
>TC223148
Length = 456
Score = 67.4 bits (163), Expect = 1e-11
Identities = 32/120 (26%), Positives = 63/120 (51%)
Frame = +2
Query: 213 AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSN 272
++ G K ++A+ + M +K PD+++Y + G + ++ +D++ + R M
Sbjct: 29 SLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIRDMMDC 208
Query: 273 SISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEA 332
++ N++ YT LI +K K +AV EM + G + V T+ L+DG CK +++A
Sbjct: 209 GLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQA 388
Score = 60.1 bits (144), Expect = 2e-09
Identities = 37/145 (25%), Positives = 67/145 (45%), Gaps = 3/145 (2%)
Frame = +2
Query: 178 VNSSNFNQPAQESMPQDADAIFNKMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLM 234
+ +S F+ + M + A I +M + L P+ + + GLC+ ++++ + M
Sbjct: 20 IYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIRDM 199
Query: 235 REKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKL 294
+ G + IYT ++D Y K K +A+ + ++MQ I +Y VLI GL K +
Sbjct: 200 MDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLV 379
Query: 295 HDAVEFCVEMLEAGHSLNVTTFVGL 319
AV + M G N+ + L
Sbjct: 380 QQAVRYFDHMTRNGLQPNIMIYTAL 454
>TC231968
Length = 610
Score = 66.6 bits (161), Expect = 2e-11
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +1
Query: 198 IFNKMKETGLIPNAVAM---LDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYT 254
+F +K+TG +P+ V+ ++GL K G F M EKG PD++ YTA+++ +
Sbjct: 31 VFASIKDTGFVPDTVSYNTXINGLRKAGRXDMCFVYFKEMTEKGVEPDLLTYTAIIEIFG 210
Query: 255 KAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEM 304
++ +++++ FR+M+ + P+ + Y LI L K K+ A E E+
Sbjct: 211 RSGNVEESLKCFREMKLKGVLPSIYIYRSLIHNLNKTGKVELATELLEEL 360
>TC232587 similar to UP|Q9LME0 (Q9LME0) F14D16.2, partial (17%)
Length = 516
Score = 65.1 bits (157), Expect = 5e-11
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Frame = +3
Query: 195 ADAIFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVD 251
A +++ +M+E GL P+ +++ L K GN A LF M E G +P++V Y ++
Sbjct: 18 AMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIA 197
Query: 252 GYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSL 311
KA + A++++ MQ+ P+ +Y+++++ L C L +A VEM +
Sbjct: 198 LQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVP 377
Query: 312 NVTTFVGLVDGFCKENGIEEAKGVIKTLIGKG 343
+ + LVD + K +E+A + ++ G
Sbjct: 378 DEPVYGLLVDLWGKAGNVEKASEWYQAMLNAG 473
Score = 40.8 bits (94), Expect = 0.001
Identities = 26/97 (26%), Positives = 47/97 (47%)
Frame = +3
Query: 260 DDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGL 319
D A+ ++++MQ +SP+ F+Y+V+I L K L A EM+E G N+ T+ +
Sbjct: 12 DVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIM 191
Query: 320 VDGFCKENGIEEAKGVIKTLIGKGFAFDEKAVRVFLD 356
+ K E A + + GF D+ + ++
Sbjct: 192 IALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVME 302
Score = 38.1 bits (87), Expect = 0.007
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 198 IFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYT 254
+++ M+ G P+ V +++ L G +EA +F M++K +PD +Y +VD +
Sbjct: 237 LYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWG 416
Query: 255 KAHKADDAIRIFRKMQSNSISPN 277
KA + A ++ M + + PN
Sbjct: 417 KAGNVEKASEWYQAMLNAGLLPN 485
>BI424784 weakly similar to GP|21741712|em oj991113_30.17 {Oryza sativa
(japonica cultivar-group)}, partial (2%)
Length = 336
Score = 63.9 bits (154), Expect = 1e-10
Identities = 30/112 (26%), Positives = 61/112 (53%)
Frame = +1
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
++ G+CK G A +LF +M + G +P++ ++DG K + +A+ +FR+++ +
Sbjct: 1 LIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMN 180
Query: 274 ISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCK 325
N Y +++ G+ KL+DA+E + G ++V T+ ++ G CK
Sbjct: 181 WDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCK 336
Score = 55.5 bits (132), Expect = 4e-08
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +1
Query: 192 PQDADAIFNKMKETGLIPN---AVAMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTA 248
P A +F M + G +PN +LDGL K EA+ LF + + +I+IY
Sbjct: 31 PVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNI 210
Query: 249 VVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYK 290
++DG + K +DA+ +F + S + + +Y ++I+GL K
Sbjct: 211 ILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCK 336
Score = 46.2 bits (108), Expect = 2e-05
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 249 VVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAG 308
++ G KA K A +F M + PN + +++ GL+KC+ +A+ E+ +
Sbjct: 1 LIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMN 180
Query: 309 HSLNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFD 347
LN+ + ++DG C + +A + L KG D
Sbjct: 181 WDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKID 297
>TC213874 similar to GB|BAC92425.1|35215067|AP004458 chloroplast RNA
processing protein-like {Oryza sativa (japonica
cultivar-group);} , partial (5%)
Length = 510
Score = 62.0 bits (149), Expect = 4e-10
Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +1
Query: 230 LFGL----MREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLI 285
+FG+ MR++ + D++ Y++++D K D AI +F+KM + I P+ ++YT+LI
Sbjct: 226 MFGIYVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIHPDMYTYTILI 405
Query: 286 QGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLV 320
GL K +L A E +L G+ L++ T+ ++
Sbjct: 406 DGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMI 510
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 23/77 (29%), Positives = 39/77 (49%)
Frame = +3
Query: 225 QEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVL 284
+ A +F M + G P + YT ++DG K D+AI +F +M+ ++ PN + L
Sbjct: 12 KHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITVNSL 191
Query: 285 IQGLYKCSKLHDAVEFC 301
I GL K ++ + C
Sbjct: 192 IDGLCKSRRIAYVWDLC 242
Score = 48.9 bits (115), Expect = 4e-06
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 195 ADAIFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVD 251
A +FN M ++G+ P + M+DGLCK EA+ LF M+ K IP+ + +++D
Sbjct: 18 AKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITVNSLID 197
Query: 252 GYTKAHK 258
G K+ +
Sbjct: 198 GLCKSRR 218
Score = 44.3 bits (103), Expect = 9e-05
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3
Query: 265 IFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFC 324
+F M + ++P SYT++I GL K + +A+ EM N T L+DG C
Sbjct: 27 VFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITVNSLIDGLC 206
Query: 325 KENGI 329
K I
Sbjct: 207 KSRRI 221
Score = 43.1 bits (100), Expect = 2e-04
Identities = 23/89 (25%), Positives = 47/89 (51%), Gaps = 3/89 (3%)
Frame = +1
Query: 200 NKMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKA 256
+KM++ + + + +++D LCK+ + +A+ LF M + PD+ YT ++DG K
Sbjct: 244 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIHPDMYTYTILIDGLCKG 423
Query: 257 HKADDAIRIFRKMQSNSISPNAFSYTVLI 285
+ A +F+ + + +YTV+I
Sbjct: 424 GRLKIAQEVFQHLLIKGYHLDIRTYTVMI 510
Score = 25.4 bits (54), Expect(2) = 3e-08
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +1
Query: 303 EMLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFDEKAVRVFLD 356
+M + +V T+ L+D CK +++A + K +I + D + +D
Sbjct: 247 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIHPDMYTYTILID 408
>BI787490
Length = 422
Score = 62.0 bits (149), Expect = 4e-10
Identities = 35/116 (30%), Positives = 58/116 (49%), Gaps = 3/116 (2%)
Frame = +2
Query: 194 DADAIFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVV 250
+A + ++M + PNA M+DGLC++ +A L LM + G PD V Y+ ++
Sbjct: 59 EARLVLDEMAAKDIEPNAYTYNIMVDGLCRNHMLSDA*GLMDLMMKNGVYPDTVTYSTLL 238
Query: 251 DGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLE 306
GY K +A + R+M N PN ++ L+ L+K + +A E +M E
Sbjct: 239 HGYCSRGKVFEAKSVLREMIRNDCQPNTYTCNTLLDSLWKEGRTLEAEEMLQKMNE 406
Score = 46.6 bits (109), Expect = 2e-05
Identities = 23/80 (28%), Positives = 43/80 (53%)
Frame = +2
Query: 261 DAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLV 320
+A + +M + I PNA++Y +++ GL + L DA M++ G + T+ L+
Sbjct: 59 EARLVLDEMAAKDIEPNAYTYNIMVDGLCRNHMLSDA*GLMDLMMKNGVYPDTVTYSTLL 238
Query: 321 DGFCKENGIEEAKGVIKTLI 340
G+C + EAK V++ +I
Sbjct: 239 HGYCSRGKVFEAKSVLREMI 298
>TC230247 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g61870
{Arabidopsis thaliana;} , partial (56%)
Length = 1291
Score = 61.2 bits (147), Expect = 7e-10
Identities = 32/134 (23%), Positives = 62/134 (45%)
Frame = +3
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
++ + G+ + M + P++ + G+ + K DD ++ + M+ S
Sbjct: 543 VIKAFAESGSTSSVYSVLAEMDKNNIAPNVTTLNNSLSGFYREKKFDDVGKVLKLMEKYS 722
Query: 274 ISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAK 333
+ P+ +Y V IQ L K + +A M+ G N ++ L+ GFCKE +EEAK
Sbjct: 723 VFPSISTYNVRIQSLCKLKRSSEAKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAK 902
Query: 334 GVIKTLIGKGFAFD 347
+ + + +G+ D
Sbjct: 903 RLFRDMKRRGYLPD 944
Score = 57.0 bits (136), Expect = 1e-08
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Frame = +3
Query: 188 QESMPQDADAIFNKMKETGLIPNAVAM---LDGLCKDGNFQEALKLFGLMREKGTIPDIV 244
+E D + M++ + P+ + LCK EA L M G P+ V
Sbjct: 666 REKKFDDVGKVLKLMEKYSVFPSISTYNVRIQSLCKLKRSSEAKALLEGMVCNGRKPNSV 845
Query: 245 IYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEM 304
Y ++ G+ K ++A R+FR M+ P+ Y L+ L + A+E E
Sbjct: 846 SYACLIHGFCKEGDLEEAKRLFRDMKRRGYLPDGECYFTLVHFLCCGGEFEAALEVAKEC 1025
Query: 305 LEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTL 339
+ G N TT LV+G ++EAK VIK +
Sbjct: 1026MGKGWVPNFTTMKSLVNGLAGALKVDEAKEVIKQI 1130
Score = 49.7 bits (117), Expect = 2e-06
Identities = 31/116 (26%), Positives = 57/116 (48%), Gaps = 3/116 (2%)
Frame = +3
Query: 194 DADAIFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVV 250
+A A+ M G PN+V+ ++ G CK+G+ +EA +LF M+ +G +PD Y +V
Sbjct: 789 EAKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAKRLFRDMKRRGYLPDGECYFTLV 968
Query: 251 DGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLE 306
+ + A+ + ++ PN + L+ GL K+ +A E ++ E
Sbjct: 969 HFLCCGGEFEAALEVAKECMGKGWVPNFTTMKSLVNGLAGALKVDEAKEVIKQIKE 1136
>TC222623 similar to UP|Q9LIL5 (Q9LIL5) Gb|AAF27119.1, partial (36%)
Length = 1017
Score = 58.9 bits (141), Expect = 4e-09
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Frame = +2
Query: 193 QDADAIFNKMKETGL---IPNAVAMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAV 249
+DA+A+F+ + GL I +L+G C GN EA +++ + PDI Y
Sbjct: 53 EDAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSHEAKRVWRDIVASPCKPDIFTYATF 232
Query: 250 VDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGH 309
+ TK K A+++FR M P+ +I L ++ +A+E +M E G
Sbjct: 233 IKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERGC 412
Query: 310 SLNVTTFVGLVDGFCKENGIEE 331
NV T+ L+ CK +E+
Sbjct: 413 EPNVATYNSLIKYMCKIQRMEK 478
Score = 52.0 bits (123), Expect = 4e-07
Identities = 29/90 (32%), Positives = 42/90 (46%)
Frame = +2
Query: 215 LDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSI 274
+ L K G ALKLF M +KG PD+VI ++D + +A+ IF M
Sbjct: 233 IKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERGC 412
Query: 275 SPNAFSYTVLIQGLYKCSKLHDAVEFCVEM 304
PN +Y LI+ + K ++ E EM
Sbjct: 413 EPNVATYNSLIKYMCKIQRMEKVYELVDEM 502
Score = 42.4 bits (98), Expect = 3e-04
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 203 KETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKA 259
K+ +PNAV +L L + G E ++ M G + +Y V+ Y K
Sbjct: 509 KKGSCLPNAVTYCYLLKSLKEPG---EVCRVLERMERNGCGMNDDVYNMVLRLYMKWDDG 679
Query: 260 DDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAG 308
D + + +M+ N P+ SYT++I ++ ++ DAV + EM+ G
Sbjct: 680 DGVRKTWEEMERNGWGPDRRSYTIMIHENFEKGRVKDAVRYLEEMISKG 826
Score = 42.4 bits (98), Expect = 3e-04
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 198 IFNKMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYT 254
+F M + G P+ V ++D LC EAL++F M E+G P++ Y +++
Sbjct: 278 LFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERGCEPNVATYNSLIKYMC 457
Query: 255 KAHKADDAIRIFRKMQ--SNSISPNAFSYTVLIQGL 288
K + + + +M+ S PNA +Y L++ L
Sbjct: 458 KIQRMEKVYELVDEMERKKGSCLPNAVTYCYLLKSL 565
>AI736610
Length = 411
Score = 58.5 bits (140), Expect = 5e-09
Identities = 24/86 (27%), Positives = 50/86 (57%)
Frame = +2
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
+L G+ A++ + M+ +G +PD+V Y +++GY + K D+A ++F +M+
Sbjct: 143 LLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRD 322
Query: 274 ISPNAFSYTVLIQGLYKCSKLHDAVE 299
I PN S+T +++G ++ DA++
Sbjct: 323 IVPNVISFTTMLKGYVAAGRIDDALK 400
Score = 47.4 bits (111), Expect = 1e-05
Identities = 21/71 (29%), Positives = 42/71 (58%), Gaps = 3/71 (4%)
Frame = +2
Query: 199 FNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTK 255
+ MK G++P+ V +++G + EA KLF M+ + +P+++ +T ++ GY
Sbjct: 194 YEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVA 373
Query: 256 AHKADDAIRIF 266
A + DDA+++F
Sbjct: 374 AGRIDDALKVF 406
>TC230477
Length = 985
Score = 58.2 bits (139), Expect = 6e-09
Identities = 36/128 (28%), Positives = 61/128 (47%)
Frame = +3
Query: 215 LDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSI 274
L GL + EA++LF M + G PD+ AV+ G+ DDA ++ +
Sbjct: 63 LAGLAEVKKAGEAVELFREMEKVGVKPDLFCINAVIKGFVNEGNLDDANNWIGEIAKSEY 242
Query: 275 SPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAKG 334
P+ +Y++++ L + A+E C E+ ++ T G+VD E I EAK
Sbjct: 243 DPDKNTYSIIVPFLCEKGDFKTAIEMCKEIFNNRCRVDATLLQGVVDKLASEGMITEAKE 422
Query: 335 VIKTLIGK 342
+++ IGK
Sbjct: 423 IVE--IGK 440
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,921,047
Number of Sequences: 63676
Number of extensions: 146443
Number of successful extensions: 911
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of query: 379
length of database: 12,639,632
effective HSP length: 99
effective length of query: 280
effective length of database: 6,335,708
effective search space: 1773998240
effective search space used: 1773998240
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC147178.7