TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147178.4 - phase: 0 
         (248 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC220513 similar to GB|AAO63356.1|28950865|BT005292 At4g16580 {A...   363  e-101
TC223451 similar to GB|AAO63356.1|28950865|BT005292 At4g16580 {A...   357  4e-99
BF066638                                                              209  7e-55
BM107943                                                               80  1e-15
BE657304                                                               32  0.27
TC216131 similar to UP|Q9M3V1 (Q9M3V1) Protein phpsphatase 2C (P...    31  0.60
TC234577                                                               29  2.3
TC227269 similar to UP|Q8VZD9 (Q8VZD9) AT5g53140/MFH8_8, partial...    28  3.0

>TC220513 similar to GB|AAO63356.1|28950865|BT005292 At4g16580 {Arabidopsis
           thaliana;} , partial (81%)
          Length = 1332

 Score =  363 bits (933), Expect = e-101
 Identities = 180/245 (73%), Positives = 204/245 (82%)
 Frame = +1

Query: 1   MLSGSCYLPHPDKVATGGEDAHFICEDEQAIGVADGVGGWADVGVNAGLYAQELVANSAR 60
           + SGSCYLPHPDK  TGGEDAHFIC DEQAIGVADGVGGWADVGVNAGL+A+EL+++S R
Sbjct: 472 LFSGSCYLPHPDKEDTGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFARELMSHSVR 651

Query: 61  AIREEPKGSFNPVRVLEKAHSKTKAMGSSTVCIIALIDEALNAINLGDSGFIVIRDGSVI 120
           AI EEPK S NP RVLEKAHS TKA GSST CII L D  L+AINLGDSGFIV+RDG  I
Sbjct: 652 AIEEEPKNSINPARVLEKAHSCTKAKGSSTACIITLTDTGLHAINLGDSGFIVVRDGCTI 831

Query: 121 FKSPVQQRGFNFPYQLARSGTEGDLPSSGEVFTVPVAPGDIIVAGTDGLFDNMYNNDIVG 180
           F+SPVQQ GFNF YQL   G  GDLPSSGEVFT+PVAPGD++VAGTDGLFDN+Y++++  
Sbjct: 832 FRSPVQQHGFNFTYQL-EIGNGGDLPSSGEVFTIPVAPGDVVVAGTDGLFDNLYHDEVTE 1008

Query: 181 VVVGATRARLGPQATAQKIAALARQRALDTKRQSPFSAAALEYGYRFDGGKLDDLTVVVS 240
           VV+ + RA L PQ TAQKIA LARQRALD  R +PFS AA E G+R+ GGKLDD+TVVVS
Sbjct: 1009VVLHSVRAGLEPQVTAQKIAVLARQRALDRNRPTPFSTAAQEAGFRYYGGKLDDITVVVS 1188

Query: 241 YISNS 245
           YI+ S
Sbjct: 1189YITGS 1203


>TC223451 similar to GB|AAO63356.1|28950865|BT005292 At4g16580 {Arabidopsis
           thaliana;} , partial (81%)
          Length = 858

 Score =  357 bits (915), Expect = 4e-99
 Identities = 177/248 (71%), Positives = 205/248 (82%)
 Frame = +2

Query: 1   MLSGSCYLPHPDKVATGGEDAHFICEDEQAIGVADGVGGWADVGVNAGLYAQELVANSAR 60
           MLSGSCYLPHPDK  TGGEDAHFIC DEQAIGVADGVGGWADVG+NA L+AQEL++N  R
Sbjct: 44  MLSGSCYLPHPDKEETGGEDAHFICTDEQAIGVADGVGGWADVGINALLFAQELISNLVR 223

Query: 61  AIREEPKGSFNPVRVLEKAHSKTKAMGSSTVCIIALIDEALNAINLGDSGFIVIRDGSVI 120
           AI++EPKGSFN  RVL +AH+ TK  GSST CI+AL D+ L+AINLGDSGFIV+RDG  I
Sbjct: 224 AIQKEPKGSFNLTRVLREAHANTKVKGSSTACIVALTDKGLHAINLGDSGFIVVRDGCTI 403

Query: 121 FKSPVQQRGFNFPYQLARSGTEGDLPSSGEVFTVPVAPGDIIVAGTDGLFDNMYNNDIVG 180
           F+SP QQ  FNFPYQL  SG   DLPSSGEVFT+PVA GD++++GTDGLFDN+YN++I G
Sbjct: 404 FESPSQQHDFNFPYQL-ESGNGADLPSSGEVFTIPVASGDVVISGTDGLFDNLYNSEITG 580

Query: 181 VVVGATRARLGPQATAQKIAALARQRALDTKRQSPFSAAALEYGYRFDGGKLDDLTVVVS 240
           VV  A RA L PQ TAQKIAALARQRAL    ++PFS AA + G+ + GGKLDD+TVVVS
Sbjct: 581 VVEHAIRAGLEPQVTAQKIAALARQRALSKSSRTPFSTAAEKAGFCYYGGKLDDITVVVS 760

Query: 241 YISNSVNE 248
           YIS SV+E
Sbjct: 761 YISGSVSE 784


>BF066638 
          Length = 413

 Score =  209 bits (533), Expect = 7e-55
 Identities = 105/138 (76%), Positives = 116/138 (83%)
 Frame = +3

Query: 72  PVRVLEKAHSKTKAMGSSTVCIIALIDEALNAINLGDSGFIVIRDGSVIFKSPVQQRGFN 131
           P RVLEKAHS TKA GSST CIIAL D+ LNAINLGDSGF+V+RDG  IF+SPVQQ  FN
Sbjct: 3   PARVLEKAHSSTKARGSSTACIIALTDQGLNAINLGDSGFMVVRDGCTIFRSPVQQHDFN 182

Query: 132 FPYQLARSGTEGDLPSSGEVFTVPVAPGDIIVAGTDGLFDNMYNNDIVGVVVGATRARLG 191
           F YQL   G+ GDLPSSG+VFT+PVAPGD+IVAGTDGLFDN+YNN+I  VVV A RA L 
Sbjct: 183 FTYQL-ECGSNGDLPSSGQVFTIPVAPGDVIVAGTDGLFDNLYNNEITAVVVHAMRAGLS 359

Query: 192 PQATAQKIAALARQRALD 209
           PQ TAQKIAALARQRA+D
Sbjct: 360 PQVTAQKIAALARQRAMD 413


>BM107943 
          Length = 376

 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
 Frame = +2

Query: 81  SKTKAMGSSTVCIIALIDEALNAINLGDSGFIVIRDGSVIFKSPVQQRGFNFPYQLARSG 140
           ++T++ GS ++ +     + L+A N+G++GFI+IRDGS+  KS      FNFP Q+ +  
Sbjct: 14  AETQSPGSCSILVTNFDGQVLHAANVGNTGFIIIRDGSIFKKSTPMFHEFNFPLQIVK-- 187

Query: 141 TEGDLPSS-GEVFTVPVAPGDIIVAGTDGLFDNMYNNDIVGVVVGATRARLGPQATAQKI 199
             GD PS   E +T+ +  GD+IV  T+GLFD +Y  +I  ++  +  A L P   A+ +
Sbjct: 188 --GDDPSELIEGYTMDLHDGDVIVTATNGLFDXLYXQEIASIISXSLEAXLTPXEIAZFL 361

Query: 200 AALAR 204
              A+
Sbjct: 362 XTRAQ 376


>BE657304 
          Length = 749

 Score = 32.0 bits (71), Expect = 0.27
 Identities = 21/86 (24%), Positives = 41/86 (47%)
 Frame = -3

Query: 162 IVAGTDGLFDNMYNNDIVGVVVGATRARLGPQATAQKIAALARQRALDTKRQSPFSAAAL 221
           IV  +DG++D + N ++VG+V  A       +++A +I                  +AAL
Sbjct: 555 IVLASDGVWDVLSNEEVVGIVSSAP-----TRSSAARILV---------------DSAAL 436

Query: 222 EYGYRFDGGKLDDLTVVVSYISNSVN 247
           E+  ++   K+DD  VV  ++   ++
Sbjct: 435 EWKLKYPTSKMDDCAVVCLFLDGKMD 358


>TC216131 similar to UP|Q9M3V1 (Q9M3V1) Protein phpsphatase 2C (PP2C)  ,
           partial (47%)
          Length = 1320

 Score = 30.8 bits (68), Expect = 0.60
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
 Frame = +3

Query: 85  AMGSSTVCIIALIDEALNAINLGDSGFIVIRDGSVIFKSP------------VQQRGFNF 132
           A+GS+ V  I   D+ + + N GDS  ++ R+G  I  S             VQ +G   
Sbjct: 357 AVGSTAVVAIVTPDKIVVS-NCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQSKGGRV 533

Query: 133 PYQ--------LARSGTEGD------LPSSGEVF-TVPVAPGDIIVAGTDGLFDNMYNND 177
            Y         LA S   GD      + S  EV  T      + ++  +DGL+D + N  
Sbjct: 534 IYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVMVTERTEEDECLILASDGLWDVVSNET 713

Query: 178 IVGVVVGATRARLGPQATAQKIAALARQRA 207
             GVV    +A+  P +    +AA    RA
Sbjct: 714 ACGVVRMCLKAQKPPGSPGSDVAADGSDRA 803


>TC234577 
          Length = 351

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 224 GYRFDGGKLDDLTVVVSYISNS 245
           G +  GGKLDD+TV+V  I +S
Sbjct: 92  GMKLTGGKLDDITVIVGQIVSS 157


>TC227269 similar to UP|Q8VZD9 (Q8VZD9) AT5g53140/MFH8_8, partial (70%)
          Length = 1398

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 15/47 (31%), Positives = 26/47 (54%)
 Frame = +2

Query: 160 DIIVAGTDGLFDNMYNNDIVGVVVGATRARLGPQATAQKIAALARQR 206
           ++I+  +DGL+D + N+D V +     R    P+A A+K+   A  R
Sbjct: 899 ELIILASDGLWDVVQNDDAVSL----ARTEEEPEAAARKLTEAAFSR 1027


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.317    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,406,740
Number of Sequences: 63676
Number of extensions: 89491
Number of successful extensions: 390
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of query: 248
length of database: 12,639,632
effective HSP length: 95
effective length of query: 153
effective length of database: 6,590,412
effective search space: 1008333036
effective search space used: 1008333036
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)