TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147014.3 + phase: 0 
         (205 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC228665 similar to UP|HL3A_ARATH (Q9SWE5) Phosphopantothenoylcy...   227  3e-60
AI437555                                                               37  0.005
TC219495 similar to UP|Q8VWN6 (Q8VWN6) Raffinose synthase  , par...    30  0.58
TC228280 similar to UP|BIOB_ARATH (P54967) Biotin synthase  (Bio...    28  2.2
TC208713                                                               27  4.9
TC229884 weakly similar to UP|Q94AX9 (Q94AX9) At1g72650/F28P22_1...    27  8.4

>TC228665 similar to UP|HL3A_ARATH (Q9SWE5) Phosphopantothenoylcysteine
           decarboxylase  (Halotolerance protein Hal3a) (AtHal3a)
           (PPCDC) (AtCoaC) , partial (89%)
          Length = 967

 Score =  227 bits (578), Expect = 3e-60
 Identities = 120/207 (57%), Positives = 145/207 (69%), Gaps = 8/207 (3%)
 Frame = +3

Query: 1   MMANSDSKSAIGHVNA----PRKPRILLGCCGSVAAMKFGLVFNAFSEWAEVRAVVTETS 56
           +MA S+   A G   A    PRKPRILL   GSVAA+KF  + + FSEWA+VRAV T  S
Sbjct: 144 VMAGSEPVRAEGETMAVDAAPRKPRILLAASGSVAAVKFANLCHCFSEWADVRAVSTSAS 323

Query: 57  LQFLVHEKAESLFTHRHDIYKDDSEWKNWKKIGDSVLHIELANWADIMVIAPLSAHTAAK 116
           L F+      +       +Y DD+EW +WKK+GDSVLHIEL  WADIMVIAPLSA+T  K
Sbjct: 324 LHFI----DRAAMPKDVILYTDDNEWSSWKKLGDSVLHIELRKWADIMVIAPLSANTLGK 491

Query: 117 IAGGLCDNLLTSIVRAWDYEKPMFVAPSMDGCMWRNPFTEQNFMSIEELGVTLIPPVQHM 176
           IAGGLCDNLLT IVRAWDY KP FVAP+M+  MW NPFTE++F+SI+ELG++LIPPV   
Sbjct: 492 IAGGLCDNLLTCIVRAWDYSKPFFVAPAMNTLMWNNPFTERHFISIDELGISLIPPVTKR 671

Query: 177 ----PTNMREMADPSTIFSTVKSFYDS 199
                     MA+PSTI+STV+ FY+S
Sbjct: 672 LACGDYGNGAMAEPSTIYSTVRLFYES 752


>AI437555 
          Length = 422

 Score = 37.4 bits (85), Expect = 0.005
 Identities = 23/47 (48%), Positives = 28/47 (58%), Gaps = 4/47 (8%)
 Frame = +3

Query: 1  MMANSDSKSAIGHVNA----PRKPRILLGCCGSVAAMKFGLVFNAFS 43
          +MA S+   A G   A    PRKPRILL   GSVAA+KF  + + FS
Sbjct: 18 VMAGSEPVRAEGETMAVDAAPRKPRILLAASGSVAAVKFANLCHYFS 158


>TC219495 similar to UP|Q8VWN6 (Q8VWN6) Raffinose synthase  , partial (33%)
          Length = 1053

 Score = 30.4 bits (67), Expect = 0.58
 Identities = 20/72 (27%), Positives = 32/72 (43%)
 Frame = +3

Query: 120 GLCDNLLTSIVRAWDYEKPMFVAPSMDGCMWRNPFTEQNFMSIEELGVTLIPPVQHMPTN 179
           G C NLL  ++ +   ++P  VAP               F S+ +LG T +  ++  P  
Sbjct: 78  GTCSNLLILVLPSMLPQEPYLVAP---------------FTSVTQLGTTTLSCLRPWPCQ 212

Query: 180 MREMADPSTIFS 191
           M   +D ST+ S
Sbjct: 213 MGPSSDVSTMHS 248


>TC228280 similar to UP|BIOB_ARATH (P54967) Biotin synthase  (Biotin
           synthetase) , partial (20%)
          Length = 510

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 21/63 (33%), Positives = 31/63 (48%), Gaps = 6/63 (9%)
 Frame = +2

Query: 139 MFVAPSMDG----CMWRNPFTEQNFMSIEELGVTLIPPVQHMPTNMREMA--DPSTIFST 192
           +F+ P+ +     C WR+PF+E        L  T IP  Q +   +RE +  DP TI + 
Sbjct: 188 LFLCPTSNSKAKTCFWRDPFSEHPPFGRCTL-PTRIPLPQQLQFKLREPSKKDPETIGAE 364

Query: 193 VKS 195
            KS
Sbjct: 365 TKS 373


>TC208713 
          Length = 531

 Score = 27.3 bits (59), Expect = 4.9
 Identities = 22/77 (28%), Positives = 35/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 79  DSEWKNWKKIGDSVLHIELANWADIMVIAPLSAHTAAKIAGGLC---DNLLTSIVRAWDY 135
           D    +WKK+ DS LH++   +  ++ +AP+S      + G LC    N+  S+V   D 
Sbjct: 283 DRATDSWKKLIDSKLHVD--KFPSLVAVAPVS------LNGKLCIIRHNMSISLV---DV 429

Query: 136 EKPMFVAPSMDGCMWRN 152
             P     S    +W N
Sbjct: 430 SSPNQQLESNPQDLWEN 480


>TC229884 weakly similar to UP|Q94AX9 (Q94AX9) At1g72650/F28P22_16 (MYB
          transcription factor), partial (20%)
          Length = 1244

 Score = 26.6 bits (57), Expect = 8.4
 Identities = 11/51 (21%), Positives = 25/51 (48%)
 Frame = +1

Query: 38 VFNAFSEWAEVRAVVTETSLQFLVHEKAESLFTHRHDIYKDDSEWKNWKKI 88
          +FN+F+EW+   +  T ++           L+    +++  D+ WK W ++
Sbjct: 7  LFNSFTEWSSAASATTRSNRSL--------LYVSVLEVHVVDTPWKLWLEL 135


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.321    0.133    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,857,457
Number of Sequences: 63676
Number of extensions: 134741
Number of successful extensions: 596
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of query: 205
length of database: 12,639,632
effective HSP length: 93
effective length of query: 112
effective length of database: 6,717,764
effective search space: 752389568
effective search space used: 752389568
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)