BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147000.12 + phase: 0
(136 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC214470 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 263 1e-71
TC214464 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 263 1e-71
TC214471 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 263 1e-71
TC214463 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 263 1e-71
TC214467 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 263 1e-71
TC214466 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 263 1e-71
TC225748 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC225747 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC217752 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC205707 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC218355 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC214482 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC214488 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC214469 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC215233 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
TC225749 homologue to UP|Q8CGN9 (Q8CGN9) Histone protein Hist2h3... 254 9e-69
TC215237 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 254 9e-69
BE190464 PIR|A27501|HS histone H3.3 [validated] - human, complete 252 3e-68
TC225752 UP|H3_PEA (P02300) Histone H3, partial (98%) 247 1e-66
TC214577 similar to UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, ... 228 5e-61
>TC214470 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 708
Score = 263 bits (673), Expect = 1e-71
Identities = 135/136 (99%), Positives = 135/136 (99%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 255
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 256 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 435
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 436 MPKDIQLARRIRGERA 483
>TC214464 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 805
Score = 263 bits (673), Expect = 1e-71
Identities = 135/136 (99%), Positives = 135/136 (99%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 52 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 231
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 232 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 411
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 412 MPKDIQLARRIRGERA 459
>TC214471 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 993
Score = 263 bits (673), Expect = 1e-71
Identities = 135/136 (99%), Positives = 135/136 (99%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 275
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 276 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 455
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 456 MPKDIQLARRIRGERA 503
>TC214463 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 814
Score = 263 bits (673), Expect = 1e-71
Identities = 135/136 (99%), Positives = 135/136 (99%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 101 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 280
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 281 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 460
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 461 MPKDIQLARRIRGERA 508
>TC214467 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 835
Score = 263 bits (673), Expect = 1e-71
Identities = 135/136 (99%), Positives = 135/136 (99%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 226
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 227 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 406
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 407 MPKDIQLARRIRGERA 454
>TC214466 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 666
Score = 263 bits (673), Expect = 1e-71
Identities = 135/136 (99%), Positives = 135/136 (99%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 57 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 236
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 237 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 416
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 417 MPKDIQLARRIRGERA 464
>TC225748 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 914
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 84 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 263
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 264 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 443
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 444 MPKDIQLARRIRGERA 491
>TC225747 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 1486
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 253
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 254 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 433
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 434 MPKDIQLARRIRGERA 481
>TC217752 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 710
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 63 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 242
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 243 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 422
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 423 MPKDIQLARRIRGERA 470
>TC205707 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 708
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 76 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 255
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 256 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 435
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 436 MPKDIQLARRIRGERA 483
>TC218355 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 652
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 77 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 256
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 257 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 436
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 437 MPKDIQLARRIRGERA 484
>TC214482 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 724
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 71 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 250
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 251 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 430
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 431 MPKDIQLARRIRGERA 478
>TC214488 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 692
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 65 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 244
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 245 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 424
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 425 MPKDIQLARRIRGERA 472
>TC214469 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 642
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 77 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 256
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 257 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 436
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 437 MPKDIQLARRIRGERA 484
>TC215233 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 707
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 426 MPKDIQLARRIRGERA 473
>TC225749 homologue to UP|Q8CGN9 (Q8CGN9) Histone protein Hist2h3c1, partial
(77%)
Length = 686
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 71 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 250
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 251 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 430
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 431 MPKDIQLARRIRGERA 478
>TC215237 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 686
Score = 254 bits (649), Expect = 9e-69
Identities = 131/136 (96%), Positives = 132/136 (96%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 50 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 229
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 230 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 409
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 410 MPKDIQLARRIRGERA 457
>BE190464 PIR|A27501|HS histone H3.3 [validated] - human, complete
Length = 435
Score = 252 bits (644), Expect = 3e-68
Identities = 129/136 (94%), Positives = 133/136 (96%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 28 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 207
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 208 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 387
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 388 MPKDIQLARRIRGERA 435
>TC225752 UP|H3_PEA (P02300) Histone H3, partial (98%)
Length = 631
Score = 247 bits (631), Expect = 1e-66
Identities = 127/134 (94%), Positives = 129/134 (95%)
Frame = +1
Query: 3 RTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELL 62
+ KQTARKSTGGKAPRK LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELL
Sbjct: 166 KKKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELL 345
Query: 63 IRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 122
IRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct: 346 IRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 525
Query: 123 KDIQLARRIRGERA 136
KDIQLARRIRGERA
Sbjct: 526 KDIQLARRIRGERA 567
>TC214577 similar to UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 892
Score = 228 bits (582), Expect = 5e-61
Identities = 118/136 (86%), Positives = 125/136 (91%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAPTTGGVKKPHRYRP T ALRE R+YQ++TE
Sbjct: 485 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPETEALRERRRYQRTTE 664
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIA DFKTDLR QS AVLALQEAAEAYLVGL +DTNLCA++AKRVTI
Sbjct: 665 LLIRKLPFQRLVREIAHDFKTDLRCQSRAVLALQEAAEAYLVGLCDDTNLCAVNAKRVTI 844
Query: 121 MPKDIQLARRIRGERA 136
MPKD +LAR I GERA
Sbjct: 845 MPKDSELAREIPGERA 892
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.133 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,972,767
Number of Sequences: 63676
Number of extensions: 37213
Number of successful extensions: 264
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of query: 136
length of database: 12,639,632
effective HSP length: 87
effective length of query: 49
effective length of database: 7,099,820
effective search space: 347891180
effective search space used: 347891180
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)
Medicago: description of AC147000.12