BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146941.18 + phase: 0 /pseudo/partial
(211 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC209126 homologue to UP|Q43456 (Q43456) Heat shock transcriptio... 269 8e-73
TC206227 similar to UP|HSF6_ARATH (Q9SCW4) Heat shock factor pro... 170 5e-43
TC208003 similar to UP|Q6VBB5 (Q6VBB5) Heat shock factor RHSF2, ... 166 5e-42
TC206226 similar to UP|HSF6_ARATH (Q9SCW4) Heat shock factor pro... 166 9e-42
TC217234 UP|Q43457 (Q43457) Heat shock transcription factor 34, ... 164 2e-41
TC230259 similar to UP|HSF7_ARATH (Q9T0D3) Heat shock factor pro... 156 7e-39
TC231490 similar to UP|HSF8_LYCPE (P41153) Heat shock factor pro... 150 3e-37
TC217188 similar to UP|Q940V6 (Q940V6) Heat shock transcription ... 147 3e-36
TC235016 similar to UP|O23259 (O23259) Heat shock transcription ... 142 1e-34
BI471764 similar to SP|Q9SCW5|HSF2_ Heat shock factor protein 2 ... 132 1e-31
TC230981 similar to GB|AAL62005.1|18252249|AY072614 AT3g24520/MO... 127 4e-30
TC220405 similar to UP|Q43454 (Q43454) Heat shock transcription ... 122 9e-29
TC208761 weakly similar to UP|HSF1_ARATH (P41151) Heat shock fac... 122 9e-29
NP005106 heat shock transcription factor 21 120 5e-28
TC219002 UP|Q43455 (Q43455) Heat shock transcription factor 29 (... 118 2e-27
TC219003 homologue to UP|Q43455 (Q43455) Heat shock transcriptio... 113 7e-26
TC208004 similar to UP|Q6VBB5 (Q6VBB5) Heat shock factor RHSF2, ... 111 3e-25
CA801977 similar to PIR|S59538|S595 heat shock transcription fac... 110 4e-25
BQ474006 similar to SP|P22335|HSF2_ Heat shock factor protein HS... 110 6e-25
TC222928 similar to UP|Q43457 (Q43457) Heat shock transcription ... 100 5e-22
>TC209126 homologue to UP|Q43456 (Q43456) Heat shock transcription factor 31
(Fragment), complete
Length = 1221
Score = 269 bits (687), Expect = 8e-73
Identities = 140/244 (57%), Positives = 167/244 (68%), Gaps = 37/244 (15%)
Frame = +1
Query: 1 MAFTLERCEDNMVFTMESQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEF 60
MA L+ CE ++ +++S KSVPAPFLTKTYQLVD+P TDHIVSW +D+TTFVVWRPPEF
Sbjct: 64 MAVLLDNCE-GILLSLDSHKSVPAPFLTKTYQLVDEPTTDHIVSWGEDDTTFVVWRPPEF 240
Query: 61 ARDLLPNFFKHNNFSSFVRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRKTPQH 120
ARDLLPN+FKHNNFSSFVRQLNTYGF+K+V DRWEFAN++FKKG KHLLCEIHRRKT Q
Sbjct: 241 ARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQP 420
Query: 121 YQ-----QQYYEQSP-------QIFQP-------------DESICWIDSPLPSPKSNTDI 155
Q ++ SP F P D+ W DSP P+ T +
Sbjct: 421 QQGSMNHHHHHAHSPLGVNVNVPTFFPFSSRVSISTSNDSDDQANWCDSP---PRGATSL 591
Query: 156 ------------LTALSEDNQRLRRKNFMLLSELSHMKNLYNDIIYFIQNHVSPASPFEQ 203
+TALSEDN+RLRR N ML+SEL+HMK LYNDIIYF+QNHV P +P
Sbjct: 592 VNGAAAANYNTSVTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNS 771
Query: 204 RSNN 207
S++
Sbjct: 772 YSSS 783
>TC206227 similar to UP|HSF6_ARATH (Q9SCW4) Heat shock factor protein 6 (HSF
6) (Heat shock transcription factor 6) (HSTF 6), partial
(54%)
Length = 1489
Score = 170 bits (430), Expect = 5e-43
Identities = 75/100 (75%), Positives = 86/100 (86%)
Frame = +2
Query: 17 ESQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSS 76
ESQ+S+P PFLTKTYQLVDD D ++SW+DD +TF+VW P FARDLLP FFKHNNFSS
Sbjct: 161 ESQRSIPTPFLTKTYQLVDDQSIDDVISWNDDGSTFIVWNPTVFARDLLPKFFKHNNFSS 340
Query: 77 FVRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRK 116
FVRQLNTYGF+KVV DRWEF+NDYF++G K LLCEI RRK
Sbjct: 341 FVRQLNTYGFRKVVPDRWEFSNDYFRRGEKRLLCEIQRRK 460
>TC208003 similar to UP|Q6VBB5 (Q6VBB5) Heat shock factor RHSF2, partial
(15%)
Length = 1105
Score = 166 bits (421), Expect = 5e-42
Identities = 87/180 (48%), Positives = 112/180 (61%)
Frame = +2
Query: 19 QKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSFV 78
+K P PFL KTY LV+DP TD ++SW+ T FVVW+PPEFARDLLP FKH+NFSSFV
Sbjct: 266 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 445
Query: 79 RQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRKTPQHYQQQYYEQSPQIFQPDES 138
RQLNTYGF+KV RWEF ND FKKG + LL EI RRK QQ + DE
Sbjct: 446 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKAWTSKQQPNAPNQATLQDSDE- 622
Query: 139 ICWIDSPLPSPKSNTDILTALSEDNQRLRRKNFMLLSELSHMKNLYNDIIYFIQNHVSPA 198
S S++ T L ++N+RL+++N +L SEL+ MK +++ + + S A
Sbjct: 623 -----DQRSSSISSSSGYTTLVDENKRLKKENGVLNSELTSMKRKCKELLDLVAKYSSHA 787
>TC206226 similar to UP|HSF6_ARATH (Q9SCW4) Heat shock factor protein 6 (HSF
6) (Heat shock transcription factor 6) (HSTF 6), partial
(33%)
Length = 535
Score = 166 bits (419), Expect = 9e-42
Identities = 72/100 (72%), Positives = 86/100 (86%)
Frame = +3
Query: 17 ESQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSS 76
ESQ+S+P PFLTKT+QLVDD D ++SW+DD +TF+VW P FARDLLP +FKHNNFSS
Sbjct: 222 ESQRSIPTPFLTKTFQLVDDQSIDDVISWNDDGSTFIVWNPTVFARDLLPKYFKHNNFSS 401
Query: 77 FVRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRK 116
FVRQLNTYGF+KVV DRWEF+N+YF++G K LLCEI RRK
Sbjct: 402 FVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLCEIQRRK 521
>TC217234 UP|Q43457 (Q43457) Heat shock transcription factor 34, complete
Length = 1423
Score = 164 bits (416), Expect = 2e-41
Identities = 87/193 (45%), Positives = 123/193 (63%), Gaps = 15/193 (7%)
Frame = +3
Query: 18 SQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSF 77
SQ+SVPAPFLTKTYQLV+D TD ++SW + TFVVW+ +FA+DLLP +FKHNNFSSF
Sbjct: 339 SQRSVPAPFLTKTYQLVEDQGTDQVISWGESGNTFVVWKHADFAKDLLPKYFKHNNFSSF 518
Query: 78 VRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRKT--------PQHYQQQYYEQS 129
VRQLNTYGF+K+V D+WEFAN++FK+G K LL EI RRKT P+ + S
Sbjct: 519 VRQLNTYGFRKIVPDKWEFANEHFKRGQKELLSEIKRRKTVPQSSAHPPEAGKSGGDGNS 698
Query: 130 PQIFQPDESICWIDSPLP-------SPKSNTDILTALSEDNQRLRRKNFMLLSELSHMKN 182
P D++ S S ++NT LS +N++L++ N L EL+ +
Sbjct: 699 PLNSGSDDAGSTSTSSSSSGSKNQGSVETNTTPSHQLSSENEKLKKDNETLSCELARARK 878
Query: 183 LYNDIIYFIQNHV 195
++++ F+++ +
Sbjct: 879 QCDELVAFLRDRL 917
>TC230259 similar to UP|HSF7_ARATH (Q9T0D3) Heat shock factor protein 7 (HSF
7) (Heat shock transcription factor 7) (HSTF 7), partial
(32%)
Length = 1260
Score = 156 bits (394), Expect = 7e-39
Identities = 71/109 (65%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = +1
Query: 9 EDNMVFTM-ESQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPN 67
E N V T +SQ+S+P PFLTKTYQLVDD D ++SW+D ++F+VW FA+DLLP
Sbjct: 85 EHNGVSTSGDSQRSIPTPFLTKTYQLVDDHTIDDVISWNDSGSSFIVWNTTAFAKDLLPK 264
Query: 68 FFKHNNFSSFVRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRK 116
+FKHNNFSSFVRQLNTYGF+KVV DRWEF+N+YF++ K LLCEI RRK
Sbjct: 265 YFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRDEKRLLCEIQRRK 411
>TC231490 similar to UP|HSF8_LYCPE (P41153) Heat shock factor protein HSF8
(Heat shock transcription factor 8) (HSTF 8) (Heat
stress transcription factor), partial (32%)
Length = 646
Score = 150 bits (380), Expect = 3e-37
Identities = 72/109 (66%), Positives = 83/109 (76%)
Frame = +3
Query: 21 SVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSFVRQ 80
+ P PFL+KTY++V+DP TD IVSWS +FVVW PPEFARDLLP FKHNNFSSFVRQ
Sbjct: 171 NAPPPFLSKTYEMVEDPSTDSIVSWSPTNNSFVVWNPPEFARDLLPKHFKHNNFSSFVRQ 350
Query: 81 LNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRKTPQHYQQQYYEQS 129
LNTYGF+KV DRWEFAN+ F +G KHLL I RRK P H Q +Q+
Sbjct: 351 LNTYGFRKVDPDRWEFANEGFLRGQKHLLKTITRRK-PAHGHNQQAQQA 494
>TC217188 similar to UP|Q940V6 (Q940V6) Heat shock transcription factor,
partial (93%)
Length = 1838
Score = 147 bits (371), Expect = 3e-36
Identities = 76/153 (49%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Frame = +2
Query: 18 SQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSF 77
S S+P PFLTKTY++VDDP T+ IVSWS +F+VW PPEF+RDLLP +FKHNNFSSF
Sbjct: 548 SSSSLP-PFLTKTYEMVDDPSTNSIVSWSATNRSFIVWNPPEFSRDLLPKYFKHNNFSSF 724
Query: 78 VRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRK-TPQHYQQQYYEQSPQIFQPD 136
+RQLNTYGF+K+ ++WEFAND F +G HLL IHRRK H Q Q +
Sbjct: 725 IRQLNTYGFRKIDPEQWEFANDDFVRGQPHLLKNIHRRKPVHSHSLQNIQGQGSSLLTES 904
Query: 137 ESICWIDSPLPSPKSNTDILTALSEDNQRLRRK 169
E +S D + L + +RL R+
Sbjct: 905 ER-----------RSFKDEIEKLKHEKERLLRE 970
>TC235016 similar to UP|O23259 (O23259) Heat shock transcription factor like
protein, partial (12%)
Length = 444
Score = 142 bits (357), Expect = 1e-34
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +2
Query: 23 PAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSFVRQLN 82
PAPFL KTY +VDD T+ IVSWS +FVVW PPEFAR LLP +FKHNNFSSF+RQLN
Sbjct: 158 PAPFLLKTYDMVDDASTNDIVSWSSTNNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLN 337
Query: 83 TYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRK 116
TYGF+K+ +RWEFAND F K KHLL I+RRK
Sbjct: 338 TYGFRKIHPERWEFANDEFLKDQKHLLKNIYRRK 439
>BI471764 similar to SP|Q9SCW5|HSF2_ Heat shock factor protein 2 (HSF 2)
(Heat shock transcription factor 2) (HSTF 2). [Mouse-ear
cress], partial (19%)
Length = 421
Score = 132 bits (332), Expect = 1e-31
Identities = 60/92 (65%), Positives = 70/92 (75%)
Frame = +2
Query: 24 APFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSFVRQLNT 83
APFL+KTY +VDDP TD +VSW + TFVVW P+F D+LP FKHNNFSSFVRQLNT
Sbjct: 116 APFLSKTYDMVDDPSTDSVVSWGKNNNTFVVWNVPQFTTDILPKHFKHNNFSSFVRQLNT 295
Query: 84 YGFKKVVADRWEFANDYFKKGAKHLLCEIHRR 115
YGF+KV DRWEFAN+ F +G K LL I R+
Sbjct: 296 YGFRKVDPDRWEFANEGFLRGEKQLLKSISRQ 391
>TC230981 similar to GB|AAL62005.1|18252249|AY072614 AT3g24520/MOB24_5
{Arabidopsis thaliana;} , partial (46%)
Length = 688
Score = 127 bits (319), Expect = 4e-30
Identities = 58/99 (58%), Positives = 73/99 (73%)
Frame = +1
Query: 18 SQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSF 77
+ +V APF+ KTY +V+DP TD ++ W +F+V P +F+ LLP FFKHNNFSSF
Sbjct: 112 NNNNVIAPFVIKTYNMVNDPTTDKLIMWGPANNSFIVLDPLDFSHSLLPAFFKHNNFSSF 291
Query: 78 VRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRK 116
VRQLNTYGF+KV DRWEFAN++F +G KHLL I RRK
Sbjct: 292 VRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLRNIARRK 408
>TC220405 similar to UP|Q43454 (Q43454) Heat shock transcription factor 21
(Fragment), partial (83%)
Length = 657
Score = 122 bits (307), Expect = 9e-29
Identities = 58/105 (55%), Positives = 74/105 (70%)
Frame = +1
Query: 23 PAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSFVRQLN 82
P PFLTKT+ +V+DP T+ IVSWS +FVVW +F+ +LP +FKHNNFSSFVRQLN
Sbjct: 148 PPPFLTKTFDVVEDPSTNDIVSWSRARNSFVVWDSHKFSTTILPRYFKHNNFSSFVRQLN 327
Query: 83 TYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRKTPQHYQQQYYE 127
TYGF+K+ D+WEFAN+ F G + LL I RR+ Q Q +E
Sbjct: 328 TYGFRKIDPDKWEFANEGFLAGQRQLLKTIKRRRHVTVTQTQSHE 462
>TC208761 weakly similar to UP|HSF1_ARATH (P41151) Heat shock factor protein
1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1),
partial (24%)
Length = 1285
Score = 122 bits (307), Expect = 9e-29
Identities = 71/182 (39%), Positives = 98/182 (53%), Gaps = 7/182 (3%)
Frame = +2
Query: 17 ESQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSS 76
+S SVP PFL K Y +V D TD ++ WS D +FV+ +F+ LLP +FKHNNFSS
Sbjct: 2 KSSGSVP-PFLKKCYDMVQDCNTDSVICWSHDGVSFVISDITQFSVTLLPTYFKHNNFSS 178
Query: 77 FVRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRKTPQHY-QQQYYEQSPQIFQP 135
F+RQLN YGF+K+ D WEFAN+ F +G KHLL IHRRK P QQ+ Q +P
Sbjct: 179 FIRQLNIYGFRKIDTDSWEFANENFVRGQKHLLKNIHRRKHPHSADQQKALPQQDNCDEP 358
Query: 136 DESI----CW--IDSPLPSPKSNTDILTALSEDNQRLRRKNFMLLSELSHMKNLYNDIIY 189
+ W +++ S T L L + + K +L L M+ ++
Sbjct: 359 SQEAPNHGLWKEVENLKLDKNSLTQELVKLRQHQESAENKLLLLSDRLQGMEKHQQQMLS 538
Query: 190 FI 191
F+
Sbjct: 539 FL 544
>NP005106 heat shock transcription factor 21
Length = 578
Score = 120 bits (301), Expect = 5e-28
Identities = 56/102 (54%), Positives = 70/102 (67%)
Frame = +1
Query: 23 PAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSFVRQLN 82
P PFL+K + +V+D TD IVSWS +FVVW +F+ D+LP +FKH NFSSF+RQLN
Sbjct: 127 PPPFLSKIFDMVEDSSTDSIVSWSMARNSFVVWDSHKFSADILPRYFKHGNFSSFIRQLN 306
Query: 83 TYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRKTPQHYQQQ 124
YGF+KV DRWEFAN+ F G +HLL I RR+ QQ
Sbjct: 307 AYGFRKVDPDRWEFANEGFLAGQRHLLKTIKRRRNVSQSLQQ 432
>TC219002 UP|Q43455 (Q43455) Heat shock transcription factor 29 (Fragment),
complete
Length = 1359
Score = 118 bits (295), Expect = 2e-27
Identities = 72/177 (40%), Positives = 97/177 (54%), Gaps = 26/177 (14%)
Frame = +1
Query: 59 EFARDLLPNFFKHNNFSSFVRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRK-- 116
EFARDLLP +FKHNN+SSFVRQLNTYGF+KVV DRWEFAND F++G + LL +I RRK
Sbjct: 1 EFARDLLPKYFKHNNYSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERALLRDIQRRKLL 180
Query: 117 -----------------TPQHYQQQYYEQSPQIFQPDESICWIDSPLPSPKSNTDILTA- 158
T SP ++ + SP+ +NT T
Sbjct: 181 PVPPAAAAPTAVTANTVTVAVAAPAVRTVSPTTSGDEQVLSSNSSPIAGNNNNTVHRTTS 360
Query: 159 ------LSEDNQRLRRKNFMLLSELSHMKNLYNDIIYFIQNHVSPASPFEQRSNNSA 209
L ++N+RLR++N L +ELS +K L N+I+ + N+ S S + S+ SA
Sbjct: 361 CTTAPELLDENERLRKENMQLSNELSQLKGLCNNILALMTNYASGFSRQQLESSTSA 531
>TC219003 homologue to UP|Q43455 (Q43455) Heat shock transcription factor 29
(Fragment), partial (76%)
Length = 1188
Score = 113 bits (282), Expect = 7e-26
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +1
Query: 49 ETTFVVWRPPEFARDLLPNFFKHNNFSSFVRQLNTYGFKKVVADRWEFANDYFKKGAKHL 108
E F+VWRP EFARDLLP +FKHNNFSSFVRQLNTYGF+KVV DRWEFAND F++G + L
Sbjct: 1 EFRFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERAL 180
Query: 109 LCEIHRRK 116
L +I RRK
Sbjct: 181 LRDIQRRK 204
>TC208004 similar to UP|Q6VBB5 (Q6VBB5) Heat shock factor RHSF2, partial
(11%)
Length = 501
Score = 111 bits (277), Expect = 3e-25
Identities = 49/69 (71%), Positives = 56/69 (81%)
Frame = +2
Query: 19 QKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSFV 78
+K P PFL KTY LVDDP TD +VSW+ + T FVVW+P EFARDLLP FKH+NFSSFV
Sbjct: 293 RKCTPPPFLLKTYMLVDDPATDDVVSWNSEGTAFVVWQPAEFARDLLPTLFKHSNFSSFV 472
Query: 79 RQLNTYGFK 87
RQLNTYGF+
Sbjct: 473 RQLNTYGFR 499
>CA801977 similar to PIR|S59538|S595 heat shock transcription factor HSF34 -
soybean, partial (23%)
Length = 435
Score = 110 bits (276), Expect = 4e-25
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +3
Query: 17 ESQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSS 76
+ Q+S PAPFLTKTY LVDDP TD +VSWS+ TFVVW+ +FA+DLLP +FKHNNFSS
Sbjct: 33 QQQRSTPAPFLTKTYLLVDDPATDDVVSWSEGGNTFVVWKHADFAKDLLPKYFKHNNFSS 212
Query: 77 FVRQLNTY 84
FVRQLNTY
Sbjct: 213 FVRQLNTY 236
>BQ474006 similar to SP|P22335|HSF2_ Heat shock factor protein HSF24 (Heat
shock transcription factor 24) (HSTF 24), partial (23%)
Length = 421
Score = 110 bits (274), Expect = 6e-25
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 5/92 (5%)
Frame = +1
Query: 23 PAPFLTKTYQLVDDPLTDH-----IVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSF 77
PAPFL KTY+L+++ + IVSW+ + T FVVW P EF+ LP +FKHNNFSSF
Sbjct: 145 PAPFLLKTYELLEELSENEKDSTKIVSWNAEGTGFVVWSPAEFSELTLPRYFKHNNFSSF 324
Query: 78 VRQLNTYGFKKVVADRWEFANDYFKKGAKHLL 109
+RQLNTYGFKK+ + +WEF ++ F++G +H+L
Sbjct: 325 IRQLNTYGFKKISSKKWEFKHEKFQRGCRHIL 420
>TC222928 similar to UP|Q43457 (Q43457) Heat shock transcription factor 34,
partial (22%)
Length = 564
Score = 100 bits (249), Expect = 5e-22
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +1
Query: 17 ESQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSS 76
+ Q+S+PAPFLTK+Y LVDDP TD +VSWS+ TFVVW+ +FA DLLP +FKHNNFSS
Sbjct: 373 QQQRSMPAPFLTKSYLLVDDPATDDVVSWSEGGNTFVVWKHADFANDLLPKYFKHNNFSS 552
Query: 77 FVRQ 80
FVRQ
Sbjct: 553 FVRQ 564
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,547,916
Number of Sequences: 63676
Number of extensions: 163445
Number of successful extensions: 859
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of query: 211
length of database: 12,639,632
effective HSP length: 93
effective length of query: 118
effective length of database: 6,717,764
effective search space: 792696152
effective search space used: 792696152
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Medicago: description of AC146941.18