BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146914.1 + phase: 0 /pseudo
(369 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC229500 similar to UP|Q6NQC3 (Q6NQC3) At3g48120, partial (14%) 213 8e-56
TC219811 similar to UP|Q6NQC3 (Q6NQC3) At3g48120, partial (13%) 185 2e-47
TC229501 similar to UP|Q6NQC3 (Q6NQC3) At3g48120, partial (14%) 129 2e-30
TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partia... 78 6e-15
TC219663 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD pro... 72 3e-13
TC230104 similar to UP|Q940U9 (Q940U9) AT5g17440/K3M16_10, parti... 71 7e-13
TC205461 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MS... 69 4e-12
TC214347 homologue to UP|Q43821 (Q43821) Ubiquitin conjugating e... 68 6e-12
TC205462 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MS... 65 5e-11
TC219166 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD pro... 62 3e-10
TC219167 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD pro... 62 3e-10
TC228857 weakly similar to UP|Q9W0H4 (Q9W0H4) CG2469-PA (Cg2469-... 60 2e-09
TC217160 similar to UP|Q15410 (Q15410) Nucleic acid binding prot... 58 8e-09
TC229920 weakly similar to UP|O64855 (O64855) Expressed protein ... 57 1e-08
BF424438 57 2e-08
BQ610931 homologue to PIR|S33620|S3362 ADR12-2 protein - soybean... 57 2e-08
TC208252 weakly similar to UP|Q9HCC8 (Q9HCC8) Osteoblast differe... 56 2e-08
TC232471 similar to UP|NLFE_HUMAN (P18615) Negative elongation f... 56 3e-08
TC228858 weakly similar to UP|Q9W0H4 (Q9W0H4) CG2469-PA (Cg2469-... 55 4e-08
TC225004 55 5e-08
>TC229500 similar to UP|Q6NQC3 (Q6NQC3) At3g48120, partial (14%)
Length = 783
Score = 213 bits (543), Expect = 8e-56
Identities = 111/132 (84%), Positives = 122/132 (92%)
Frame = +3
Query: 238 RVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFS 297
RVKAKMKLQLSETAA+DS++G GWERFEFNKDAPLDDEEVE AEDDASLVKHIGQSFRFS
Sbjct: 24 RVKAKMKLQLSETAAQDSEKGEGWERFEFNKDAPLDDEEVEVAEDDASLVKHIGQSFRFS 203
Query: 298 AVESKREDQIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLVSSLLSETVLA 357
AV+++RE+QIQAAH+EAMFGA A PPT STDSEPERENEKE D KK+LV+SLLSETVLA
Sbjct: 204 AVKARREEQIQAAHEEAMFGATALLPPT-STDSEPERENEKETD-KKELVTSLLSETVLA 377
Query: 358 RPKGSWRDRVRQ 369
+ GSWRDRVRQ
Sbjct: 378 KQNGSWRDRVRQ 413
>TC219811 similar to UP|Q6NQC3 (Q6NQC3) At3g48120, partial (13%)
Length = 567
Score = 185 bits (470), Expect = 2e-47
Identities = 123/230 (53%), Positives = 141/230 (60%)
Frame = +3
Query: 1 MEEEKAAAYYDELTRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASS 60
MEEEKAAAYYDEL+RKGEGAA+FKQGLGFS+S ND VPKP SSFLS+FVKASS
Sbjct: 81 MEEEKAAAYYDELSRKGEGAARFKQGLGFSSSAPNDDVPKP-------SSFLSKFVKASS 239
Query: 61 SSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRS 120
TAPS+S++++QLQSI +KLKKKP++ESRV SS DSDR +RRSR
Sbjct: 240 ---------TAPSNSEKQAQLQSIHHKLKKKPSSESRV--------SSSDSDRSRRRSRD 368
Query: 121 RSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGRE 180
R RE SRRRSRSRER+ R R+ GR RS
Sbjct: 369 RYRE------SRRRSRSRERH---------RHRERGRRRS-------------------- 443
Query: 181 KGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGY 230
RSVSPRKQRRSE D +RGK SE +K KN +DY KLI GY
Sbjct: 444 ------RSVSPRKQRRSE---KDANDRGKVSETKKRKNAEIDYYKLIPGY 566
>TC229501 similar to UP|Q6NQC3 (Q6NQC3) At3g48120, partial (14%)
Length = 702
Score = 129 bits (324), Expect = 2e-30
Identities = 68/82 (82%), Positives = 75/82 (90%)
Frame = +3
Query: 288 KHIGQSFRFSAVESKREDQIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLV 347
KHIGQSFRFSAVE++RE+QIQAAH+EAMFGA A PPT STDSEPERENEKE D KK+LV
Sbjct: 3 KHIGQSFRFSAVEARREEQIQAAHEEAMFGATALLPPT-STDSEPERENEKEAD-KKELV 176
Query: 348 SSLLSETVLARPKGSWRDRVRQ 369
+SLLSETVLA+ KGSWRDRVRQ
Sbjct: 177 ASLLSETVLAKQKGSWRDRVRQ 242
>TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partial (88%)
Length = 1691
Score = 78.2 bits (191), Expect = 6e-15
Identities = 59/185 (31%), Positives = 88/185 (46%), Gaps = 17/185 (9%)
Frame = +3
Query: 77 RKSQLQSIQNKLKKKPTTESRVSEKTNRDYS---------SRDSDRRKRRSRSRSRERYR 127
R+S L+ + ++K E V E ++ Y +R+ DR +R R R+R
Sbjct: 747 RRSALEEDFEEEEEKEDNEQPVDEIEDKAYEKDHYRGRSPTRERDRDRRHDSHRHRDRDY 926
Query: 128 DRD-----SRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDR---GRDRRKRERGR 179
DRD R R R R+R DRDR+RDRD R R R + D R GR+R +RE+ R
Sbjct: 927 DRDYDRDYDRERGRGRDR-----DRDRERDRDRDRYRLREEKDYGRDREGRERERREKDR 1091
Query: 180 EKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERV 239
++GRRRS S RS +S D +E G ++ V + G ++ P ++
Sbjct: 1092DRGRRRSHS-------RSRSRSRDRREHDGGDYRKRHARSSVSPRRHGDGLEDGEPKKKK 1250
Query: 240 KAKMK 244
K + K
Sbjct: 1251KKEKK 1265
Score = 68.9 bits (167), Expect = 3e-12
Identities = 53/148 (35%), Positives = 76/148 (50%), Gaps = 4/148 (2%)
Frame = +3
Query: 103 NRDYSSRDSDRRKRRSRSRSRERYRDRDSRR----RSRSRERNSRYSDRDRDRDRDSGRS 158
+RDY D +R + R R R RER RDRD R + R+R R +R R++DRD GR
Sbjct: 939 DRDY---DRERGRGRDRDRDRERDRDRDRYRLREEKDYGRDREGRERER-REKDRDRGRR 1106
Query: 159 RSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKN 218
RS S S R RDRR+ + G + R SVSPR R + ++ K E ++ K+
Sbjct: 1107 RSHSRSR-SRSRDRREHDGGDYRKRHARSSVSPR--RHGDGLEDGEPKKKKKKEKKEKKD 1277
Query: 219 VGVDYAKLIHGYDNMAPAERVKAKMKLQ 246
G D H +A A +++A + L+
Sbjct: 1278 DGTD-----HPDPEIAEANKLRAALGLK 1346
Score = 44.3 bits (103), Expect = 9e-05
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +3
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD-SR 132
D DR+ +++ +++ R + +DY RD + R+R R + R+R R R SR
Sbjct: 945 DYDRERGRGRDRDRDRERDRDRDRYRLREEKDYG-RDREGRERERREKDRDRGRRRSHSR 1121
Query: 133 RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREK 181
RSRSR+R R R S S R ++ G ++K+++ +++
Sbjct: 1122 SRSRSRDRREHDGGDYRKRHARSSVSPRRHGDGLEDGEPKKKKKKEKKE 1268
Score = 35.4 bits (80), Expect = 0.041
Identities = 39/151 (25%), Positives = 53/151 (34%), Gaps = 5/151 (3%)
Frame = +3
Query: 74 DSDRKSQLQSIQNKLKK-KPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSR 132
D DR+ + +L++ K R + R RD RR+ SRSRSR R R
Sbjct: 981 DRDRERDRDRDRYRLREEKDYGRDREGRERERREKDRDRGRRRSHSRSRSRSRDRREHDG 1160
Query: 133 RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSD----VDRGRDRRKRERGREKGRRRSRS 188
R R S S R + G + + + D G D E R +
Sbjct: 1161 GDYRKRHARSSVSPRRHGDGLEDGEPKKKKKKEKKEKKDDGTDHPDPEIAEANKLRAALG 1340
Query: 189 VSPRKQRRSEVKSSDVKERGKGSEMRKGKNV 219
+ P + V S V G E KG V
Sbjct: 1341 LKPLR-----V*SGSVV*VWSGFETTKGSKV 1418
>TC219663 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD protein {Homo
sapiens;} , partial (14%)
Length = 1176
Score = 72.4 bits (176), Expect = 3e-13
Identities = 48/101 (47%), Positives = 56/101 (54%), Gaps = 6/101 (5%)
Frame = +3
Query: 109 RDSDRRKRRSRSRSRERYRDRDSR--RRSRSRERN---SRYSDRDRDRDRDSGRSRSRSD 163
RD DR + RSR S ER RDRD R R R R+RN R +RDRDR RD R+R D
Sbjct: 300 RDKDRERERSREHSHERVRDRDHREDRHHRDRDRNRDRDRDRERDRDRGRDRDRTR---D 470
Query: 164 SDVDRGRDR-RKRERGREKGRRRSRSVSPRKQRRSEVKSSD 203
D +RGRDR R RE R + R R V + RS + SD
Sbjct: 471 RDRERGRDRDRDREYDRHRERDRDYEVGDPDRGRSRDRESD 593
Score = 64.3 bits (155), Expect = 8e-11
Identities = 51/128 (39%), Positives = 63/128 (48%), Gaps = 9/128 (7%)
Frame = +3
Query: 114 RKRRSRSRSRERYRDRDSRRRSRSRER-NSRYSDRD-------RDRDRDSGRSRSRSDSD 165
R R R SRER RD+D R R RSRE + R DRD RDRDR+ R R R + D
Sbjct: 261 RSSRDREISRERGRDKD-RERERSREHSHERVRDRDHREDRHHRDRDRNRDRDRDR-ERD 434
Query: 166 VDRGRDR-RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYA 224
DRGRDR R R+R RE+GR R R R+ R + D + + + D
Sbjct: 435 RDRGRDRDRTRDRDRERGRDRDRD---REYDRHRERDRDYEVGDPDRGRSRDRESDYDRV 605
Query: 225 KLIHGYDN 232
+ HG N
Sbjct: 606 ESKHGERN 629
Score = 61.6 bits (148), Expect = 5e-10
Identities = 48/140 (34%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Frame = +3
Query: 61 SSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNR-DYSSRDSDRRKRRSR 119
SS S D DR+ + + + + RV ++ +R D RD DR + R R
Sbjct: 264 SSRDREISRERGRDKDRERE--------RSREHSHERVRDRDHREDRHHRDRDRNRDRDR 419
Query: 120 SRSRERYRDRD-SRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKR--- 175
R R+R R RD R R R RER R DRDR+ DR R R D DRGR R +
Sbjct: 420 DRERDRDRGRDRDRTRDRDRERG-RDRDRDREYDRHRERDRDYEVGDPDRGRSRDRESDY 596
Query: 176 ERGREKGRRRSRSVSPRKQR 195
+R K R+ P R
Sbjct: 597 DRVESKHGERNHDYEPEDDR 656
Score = 48.9 bits (115), Expect = 4e-06
Identities = 37/131 (28%), Positives = 54/131 (40%), Gaps = 18/131 (13%)
Frame = +3
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D +R+ + +++ + E R +R+ RD DR + R R R R+R RDRD R
Sbjct: 309 DRERERSREHSHERVRDRDHREDRHHRDRDRN-RDRDRDRERDRDRGRDRDRTRDRD-RE 482
Query: 134 RSRSRERNSRYS------------------DRDRDRDRDSGRSRSRSDSDVDRGRDRRKR 175
R R R+R+ Y RDR+ D D S+ + D R R
Sbjct: 483 RGRDRDRDREYDRHRERDRDYEVGDPDRGRSRDRESDYDRVESKHGERNHDYEPEDDRGR 662
Query: 176 ERGREKGRRRS 186
E GRR +
Sbjct: 663 HNQYEHGRRHA 695
>TC230104 similar to UP|Q940U9 (Q940U9) AT5g17440/K3M16_10, partial (24%)
Length = 763
Score = 71.2 bits (173), Expect = 7e-13
Identities = 47/96 (48%), Positives = 50/96 (51%), Gaps = 3/96 (3%)
Frame = +3
Query: 95 ESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDR---DSRRRSRSRERNSRYSDRDRDR 151
E S KT+R D R K RSR R RE RDR DSR R R +R SR DR DR
Sbjct: 192 ERNKSRKTDR----LDDRRSKERSRDRDRESSRDRELGDSRERGRDHDRRSRDHDRHYDR 359
Query: 152 DRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSR 187
DR R R R DSD R D R R R R + R RSR
Sbjct: 360 DRGYDRDRDR-DSDRTRSYDSRSRRRSRSRSRERSR 464
Score = 53.1 bits (126), Expect = 2e-07
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Frame = +3
Query: 111 SDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRS------DS 164
++ ++ R++SR +R DR S+ RSR R DR+ RDR+ G SR R
Sbjct: 177 AELQEERNKSRKTDRLDDRRSKERSRDR-------DRESSRDRELGDSRERGRDHDRRSR 335
Query: 165 DVDRGRDR-RKRERGREKGRRRSRSVSPRKQRRSEVKSSD 203
D DR DR R +R R++ R+RS R +RRS +S +
Sbjct: 336 DHDRHYDRDRGYDRDRDRDSDRTRSYDSRSRRRSRSRSRE 455
Score = 52.4 bits (124), Expect = 3e-07
Identities = 41/110 (37%), Positives = 55/110 (49%), Gaps = 13/110 (11%)
Frame = +3
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDY---SSRD---SDRRKRRS----RSRSRER 125
++ ++LQ +NK +K + R S++ +RD SSRD D R+R RSR +R
Sbjct: 168 EKLAELQEERNKSRKTDRLDDRRSKERSRDRDRESSRDRELGDSRERGRDHDRRSRDHDR 347
Query: 126 YRDRD---SRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR 172
+ DRD R R R +R Y R R R R R RSR D D R DR
Sbjct: 348 HYDRDRGYDRDRDRDSDRTRSYDSRSRRRSRSRSRERSR-DYDRHRRHDR 494
>TC205461 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MSJ1_4
{Arabidopsis thaliana;} , partial (69%)
Length = 1148
Score = 68.6 bits (166), Expect = 4e-12
Identities = 54/124 (43%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Frame = +3
Query: 94 TESRVSEKTNRDYSSRDSDRRKRRSRSRSRERY-------RDRDSRRRSRSRERNSRYSD 146
+ SR K +RD RD D R RRSRSRS +RY RD+D RRRSRSR + Y
Sbjct: 438 SRSRSPRKRHRD-DYRDRDYR-RRSRSRSYDRYERDRHRGRDKDYRRRSRSRSASLDYKG 611
Query: 147 RDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRS----RSVSPRKQRRSEVKSS 202
R R R D SRSRS S R RR R +RS RS SPRK R E ++
Sbjct: 612 RGRGRYDDERNSRSRSRSVDSRSPARRSPSPRRSPSPQRSTSPQRSTSPRKSPRGESPAN 791
Query: 203 DVKE 206
+E
Sbjct: 792 RSRE 803
Score = 64.7 bits (156), Expect = 6e-11
Identities = 46/93 (49%), Positives = 54/93 (57%), Gaps = 6/93 (6%)
Frame = +3
Query: 110 DSDRRKRRSRSRS-----RERYRDRDSRRRSRSRERNSRYSDRDRDRDRD-SGRSRSRSD 163
++ R RRSRSRS R+ YRDRD RRRSRSR + DR R RD+D RSRSRS
Sbjct: 414 ETSPRSRRSRSRSPRKRHRDDYRDRDYRRRSRSRSYDRYERDRHRGRDKDYRRRSRSRSA 593
Query: 164 SDVDRGRDRRKRERGREKGRRRSRSVSPRKQRR 196
S +GR R + + R R RSRSV R R
Sbjct: 594 SLDYKGRGRGRYDDER-NSRSRSRSVDSRSPAR 689
Score = 29.3 bits (64), Expect = 3.0
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +3
Query: 112 DRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRD-RDRDSGRSRSRSDSDVDRGR 170
DRR SR + RY+ D +++ R R+ + G + R + +GR
Sbjct: 240 DRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAER----IHKGR 407
Query: 171 DRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGK 209
R R RSRS SPRK+ R + + D + R +
Sbjct: 408 IIETSPRSR-----RSRSRSPRKRHRDDYRDRDYRRRSR 509
>TC214347 homologue to UP|Q43821 (Q43821) Ubiquitin conjugating enzyme ,
partial (36%)
Length = 899
Score = 68.2 bits (165), Expect = 6e-12
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Frame = +2
Query: 100 EKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR---RSRSRERNSRYSDRDR--DRDRD 154
E+ Y RD +R R R R RERYRD DS R R R R N R +R+R D D+
Sbjct: 206 ERDRDRYRDRDRNREWERDRDRDRERYRDHDSERDQDRDRIRRNNERERERERIYDYDKR 385
Query: 155 SGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRK---QRRSEVKSSDVKERGKGS 211
S + S D D G +R R R + R RSRS+ + RS + + K S
Sbjct: 386 SKYTERESSRDYDNGSRHYRRSRSRSRSRSRSRSLQAGTGWYESRSSPQREESKRTSASS 565
Query: 212 EMRKGKNV 219
+ K K++
Sbjct: 566 NLAKLKDM 589
Score = 55.8 bits (133), Expect = 3e-08
Identities = 48/151 (31%), Positives = 70/151 (45%), Gaps = 24/151 (15%)
Frame = +2
Query: 111 SDRRKRRS-----RSRSRERYRDRDSRR---RSRSRERNSRYSDRDRDRDRDSGRSRSRS 162
S RR R+ R R R+RYRDRD R R R R+R RY D D +RD+D R R +
Sbjct: 164 SHRRDXRAEFGTRRERDRDRYRDRDRNREWERDRDRDR-ERYRDHDSERDQDRDRIRRNN 340
Query: 163 DSDVDRGR----DRRKRERGREKGR---------RRSRSVSPRKQRRSEVKSSDVKERGK 209
+ + +R R D+R + RE R RRSRS S + R +++ +
Sbjct: 341 ERERERERIYDYDKRSKYTERESSRDYDNGSRHYRRSRSRSRSRSRSRSLQAGTGWYESR 520
Query: 210 GSEMR---KGKNVGVDYAKLIHGYDNMAPAE 237
S R K + + AKL Y ++ ++
Sbjct: 521 SSPQREESKRTSASSNLAKLKDMYGDLGDSK 613
Score = 34.7 bits (78), Expect = 0.070
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Frame = +2
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRER-------- 125
+++R+ + + I + K+ TE +++RDY + R RRSRSRSR R
Sbjct: 335 NNERERERERIYDYDKRSKYTE----RESSRDYDN--GSRHYRRSRSRSRSRSRSRSLQA 496
Query: 126 ----YRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDR 168
Y R S +R S+ R S S+ + +D S+ D++++R
Sbjct: 497 GTGWYESRSSPQREESK-RTSASSNLAKLKDMYGDLGDSKGDANMER 634
>TC205462 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MSJ1_4
{Arabidopsis thaliana;} , partial (54%)
Length = 1403
Score = 65.1 bits (157), Expect = 5e-11
Identities = 51/118 (43%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Frame = +3
Query: 94 TESRVSEKTNRD-YSSRDSDRRKRRSRSRSRERY-------RDRDSRRRSRSRERNSRYS 145
+ SR K +RD Y RD +RRSRSRS +RY RD+D RRRSRSR + Y
Sbjct: 435 SRSRSPRKRHRDDYKDRDY---RRRSRSRSYDRYERDRHRGRDKDYRRRSRSRSASLDYK 605
Query: 146 DRDRDRDRDSGRSRSRSDSDVDRGRDRR-----KRERGREKGRRRSRSVSPRKQRRSE 198
R R R D SRSRS S VD G R +R ++ RS SPRK R E
Sbjct: 606 GRGRGRYDDERNSRSRSRS-VDSGSPARRSPSPRRSPSPQRSTSPQRSPSPRKSPRGE 776
Score = 62.8 bits (151), Expect = 2e-10
Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Frame = +3
Query: 110 DSDRRKRRSRSRS-----RERYRDRDSRRRSRSRERNSRYSDRDRDRDRD-SGRSRSRSD 163
++ R RRSRSRS R+ Y+DRD RRRSRSR + DR R RD+D RSRSRS
Sbjct: 411 ETSPRSRRSRSRSPRKRHRDDYKDRDYRRRSRSRSYDRYERDRHRGRDKDYRRRSRSRSA 590
Query: 164 SDVDRGRDR---------RKRERGREKGRRRSRSVSPRK 193
S +GR R R R R + G RS SPR+
Sbjct: 591 SLDYKGRGRGRYDDERNSRSRSRSVDSGSPARRSPSPRR 707
Score = 34.3 bits (77), Expect = 0.092
Identities = 46/160 (28%), Positives = 62/160 (38%), Gaps = 25/160 (15%)
Frame = +3
Query: 64 TTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRD-YSSRDSDRRKR------ 116
T+ S + S S RK +++ ++ + SR ++ RD + RD D R+R
Sbjct: 414 TSPRSRRSRSRSPRKRHRDDYKDRDYRR-RSRSRSYDRYERDRHRGRDKDYRRRSRSRSA 590
Query: 117 ------RSRSR------SRERYRDRDS---RRRSRSRERNSRYSDRDRDRDRDSGRSRSR 161
R R R SR R R DS RRS S R+ + S R R
Sbjct: 591 SLDYKGRGRGRYDDERNSRSRSRSVDSGSPARRSPSPRRSPSPQRSTSPQRSPSPRKSPR 770
Query: 162 SDSDVDRGRDRRKRERGREKGRRR---SRSVSPRKQRRSE 198
+S +R RD R R R SRS SPR E
Sbjct: 771 GESPANRSRDGRSPTPRSVSPRGRPDASRSPSPRNSNGDE 890
Score = 30.4 bits (67), Expect = 1.3
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +3
Query: 112 DRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRD-RDRDSGRSRSRSDSDVDRGR 170
DRR SR + RY+ D +++ R R+ + G + R + +GR
Sbjct: 237 DRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAER----IHKGR 404
Query: 171 DRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGK 209
R R RSRS SPRK+ R + K D + R +
Sbjct: 405 IIETSPRSR-----RSRSRSPRKRHRDDYKDRDYRRRSR 506
>TC219166 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD protein {Homo
sapiens;} , partial (12%)
Length = 774
Score = 62.4 bits (150), Expect = 3e-10
Identities = 41/135 (30%), Positives = 61/135 (44%)
Frame = +3
Query: 75 SDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRR 134
SD +S+ + + + +P +S+ K D DR + R R R R+R RDRD R
Sbjct: 147 SDDESKGMITEGEARDEPILKSKADRKIEAIERRADRDRDRERYRDRERDRDRDRD---R 317
Query: 135 SRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQ 194
++SR DRDR RD D R R ++ + RD R RER ++ G
Sbjct: 318 TKSR-------DRDRGRDSDKEREREEAERGKLKDRDHRSRERAKDSGHSEKSKRHSSHD 476
Query: 195 RRSEVKSSDVKERGK 209
R S S +E+ +
Sbjct: 477 RDSHGSSYSSREKDR 521
Score = 31.6 bits (70), Expect = 0.60
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 89 KKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRD 148
K++ E+ + +RD+ SR+ + S R DRDS S YS R+
Sbjct: 357 KEREREEAERGKLKDRDHRSRERAKDSGHSEKSKRHSSHDRDSH--------GSSYSSRE 512
Query: 149 RDRDR 153
+DR R
Sbjct: 513 KDRHR 527
>TC219167 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD protein {Homo
sapiens;} , partial (11%)
Length = 600
Score = 62.4 bits (150), Expect = 3e-10
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Frame = +3
Query: 75 SDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRR 134
SD +S+ S + + + +P +S+ ++ +RD DR + R R R R+R RDRD
Sbjct: 81 SDDESKGMSTEGEARDEPILKSK-ADHIGETRRNRDRDRDRERDRGRERDRDRDRD---- 245
Query: 135 SRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR--RKRERGREKG 182
R RDRDR RDS + R R +++ D+ +DR R RER ++ G
Sbjct: 246 --------RTKSRDRDRGRDSDKEREREEAERDKLKDRGHRSRERAKDSG 371
Score = 52.4 bits (124), Expect = 3e-07
Identities = 40/132 (30%), Positives = 63/132 (47%)
Frame = +3
Query: 109 RDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDR 168
+DS R S+ S E + +S++ +RDRDRDR+ R R R D DR
Sbjct: 66 KDSKRSDDESKGMSTEGEARDEPILKSKADHIGETRRNRDRDRDRERDRGRER---DRDR 236
Query: 169 GRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIH 228
RDR K R R++GR S +++ R E + +K+RG S R + + +K
Sbjct: 237 DRDRTK-SRDRDRGRD-----SDKEREREEAERDKLKDRGHRSRERAKDSGHSEKSKRHS 398
Query: 229 GYDNMAPAERVK 240
+D ++ + R K
Sbjct: 399 SHDRVSYSSREK 434
>TC228857 weakly similar to UP|Q9W0H4 (Q9W0H4) CG2469-PA (Cg2469-pb)
(LD24034p), partial (5%)
Length = 884
Score = 59.7 bits (143), Expect = 2e-09
Identities = 44/99 (44%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Frame = +2
Query: 111 SDRRKRRSRSRSRERYRDRD---SRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVD 167
S + + RS SRS ER R D S RSRSR R+ +S R R R R R RSRS S
Sbjct: 50 SSKGRGRSHSRSPERVRTWDYSKSSSRSRSRSRSRSWS-RGRSRSRSWSRGRSRSYSRSI 226
Query: 168 RGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKE 206
R R R RGR R RSRS S ++ RS+ + D K+
Sbjct: 227 SPRRSRSRSRGRSYSRSRSRSPSYDRRDRSDQQLPDQKD 343
Score = 47.4 bits (111), Expect = 1e-05
Identities = 42/100 (42%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = +2
Query: 89 KKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD---SRRRSRSRERN-SRY 144
K + + SR E+ S+ S R + RSRSRS R R R SR RSRS R+ S
Sbjct: 56 KGRGRSHSRSPERVRTWDYSKSSSRSRSRSRSRSWSRGRSRSRSWSRGRSRSYSRSISPR 235
Query: 145 SDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRR 184
R R R R RSRSRS S DR RDR ++ +K R
Sbjct: 236 RSRSRSRGRSYSRSRSRSPS-YDR-RDRSDQQLPDQKDIR 349
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/83 (39%), Positives = 42/83 (49%), Gaps = 3/83 (3%)
Frame = +2
Query: 116 RRSRSRSR-ERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK 174
++ R R R + RD S+ R RS +SR +R R D SRSRS S R
Sbjct: 5 QQGRGRGRFDNRRDVSSKGRGRS---HSRSPERVRTWDYSKSSSRSRSRSRSRSWSRGRS 175
Query: 175 RERGREKGRRR--SRSVSPRKQR 195
R R +GR R SRS+SPR+ R
Sbjct: 176 RSRSWSRGRSRSYSRSISPRRSR 244
>TC217160 similar to UP|Q15410 (Q15410) Nucleic acid binding protein
(Fragment), partial (37%)
Length = 988
Score = 57.8 bits (138), Expect = 8e-09
Identities = 46/109 (42%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Frame = +3
Query: 107 SSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDV 166
+ RD DR + R+R R RER RD+D R DRDRDR R S RSRSRS
Sbjct: 33 TDRDRDRDRDRTRDRERERRRDKDDR-------------DRDRDRAR-SKRSRSRSP--- 161
Query: 167 DRGRDRRKRERG---REKGRRRSRSVS---PRKQRRSEVKSSDVKERGK 209
DRGR R R R RR R+ S PRK+ R + + KE K
Sbjct: 162 DRGRSRHLRSPSPSERSHRRRHHRTPSPDPPRKRHRRDSTEEEHKETKK 308
Score = 55.8 bits (133), Expect = 3e-08
Identities = 50/162 (30%), Positives = 74/162 (44%), Gaps = 1/162 (0%)
Frame = +3
Query: 142 SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGR-RRSRSVSPRKQRRSEVK 200
S +DRDRDRDRD R R R +R RD+ R+R R++ R +RSRS SP + R ++
Sbjct: 24 STMTDRDRDRDRDRTRDRER-----ERRRDKDDRDRDRDRARSKRSRSRSPDRGRSRHLR 188
Query: 201 SSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVG 260
S ER R + D + H D+ E + K +S+ D V
Sbjct: 189 SPSPSER--SHRRRHHRTPSPDPPRKRHRRDS---TEEEHKETKKAVSDFV----DGIVK 341
Query: 261 WERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESK 302
++ + KD E EG ED+ ++K G F + + K
Sbjct: 342 EQQQKQQKDNGDGGGEAEGNEDELEMMKMFGIPTGFDSTKGK 467
Score = 39.3 bits (90), Expect = 0.003
Identities = 27/56 (48%), Positives = 30/56 (53%)
Frame = -1
Query: 114 RKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRG 169
R+ R R RS ER RD R RSRSR R+S R R RSRSRS S + G
Sbjct: 187 RRWRERPRSGERERDLLLRARSRSRSRSSLSLLRSLSLSRVRSRSRSRSRSVMVEG 20
>TC229920 weakly similar to UP|O64855 (O64855) Expressed protein
(At2g44200/F6E13.34), partial (19%)
Length = 1372
Score = 57.0 bits (136), Expect = 1e-08
Identities = 36/148 (24%), Positives = 72/148 (48%)
Frame = +3
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRS 135
+++ + +S ++K KK +E +E+ R + DSDR+ +++S S + + + RRR
Sbjct: 30 EKRKKHRSSKSKHKKLSDSEDDTTERRKRKTGNEDSDRKHHKAQSDSEYQSSEGEMRRR- 206
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQR 195
+ R + +Y +R + + + + DR +R K ER +KG+ S S ++
Sbjct: 207 KDRIEDQKYRERSPNHQQRQRNGKDYKEDAGDRNYNRSKSERSVQKGQLDSGYESSEGEK 386
Query: 196 RSEVKSSDVKERGKGSEMRKGKNVGVDY 223
R + D K R + ++ + G DY
Sbjct: 387 RRKNHYEDKKYRERSPNHQQRQRNGRDY 470
Score = 37.0 bits (84), Expect = 0.014
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Frame = +3
Query: 97 RVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRD---RDR 153
R +K D S+ KRR ++YR+R + R R D D R+R
Sbjct: 330 RSVQKGQLDSGYESSEGEKRRKNHYEDKKYRERSPNHQQRQRNGRDYKEDTGEDKKHRER 509
Query: 154 DSG---RSRSRSDSDVDRGRDRRKRERGREKGRRRSRS 188
R R+ D G D++ RER E R+ S
Sbjct: 510 SPNHQQRQRNGRDYKEGTGEDKKYRERSPEHQHRQRNS 623
>BF424438
Length = 393
Score = 56.6 bits (135), Expect = 2e-08
Identities = 42/86 (48%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Frame = +2
Query: 88 LKKKPTTES---RVSEKTNRDYSSRDSDRRKRRSRSRSRERYR----DRDSRRRSRSRER 140
LK+K ES R E+ R S +R RRS+SRSR+R R DRD RR R R+R
Sbjct: 116 LKRKKERESERKRSPERAPRRKHSXSPRKRSRRSKSRSRDRDRRDHGDRDRDRRDRDRDR 295
Query: 141 NSRYSDRDRDRDRD----SGRSRSRS 162
+ R DRDRDRDR S RSRS S
Sbjct: 296 DDR-RDRDRDRDRKHKKRSDRSRSGS 370
Score = 54.7 bits (130), Expect = 7e-08
Identities = 37/90 (41%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 105 DYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDS 164
+Y R +R R RS R R R RSR SR DRDR D R R D
Sbjct: 110 EYLKRKKERESERKRSPERAPRRKHSXSPRKRSRRSKSRSRDRDRRDHGDRDRDRRDRDR 289
Query: 165 DVDRGRDR-RKRERGREKGRRRSRSVSPRK 193
D D RDR R R+R +K RSRS S K
Sbjct: 290 DRDDRRDRDRDRDRKHKKRSDRSRSGSSPK 379
Score = 38.9 bits (89), Expect = 0.004
Identities = 31/93 (33%), Positives = 44/93 (46%), Gaps = 13/93 (13%)
Frame = +2
Query: 119 RSRSRERYRDRDS---RRRSRSRER--------NSRYSDRDRDRDRDS-GRSRSRSDSD- 165
+S R+ Y + R++ R ER ++S R R R S RSR R D
Sbjct: 74 KSLVRQMYEEHPEYLKRKKERESERKRSPERAPRRKHSXSPRKRSRRSKSRSRDRDRRDH 253
Query: 166 VDRGRDRRKRERGREKGRRRSRSVSPRKQRRSE 198
DR RDRR R+R R+ R R R + ++RS+
Sbjct: 254 GDRDRDRRDRDRDRDDRRDRDRDRDRKHKKRSD 352
>BQ610931 homologue to PIR|S33620|S3362 ADR12-2 protein - soybean, partial
(92%)
Length = 446
Score = 56.6 bits (135), Expect = 2e-08
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = +1
Query: 115 KRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK 174
+ R R R RER R+R+ R R R RER +R+R+R+R+ R R R R+
Sbjct: 4 RERERERERERERERE-RERERERER-----ERERERERERERERERE----------RE 135
Query: 175 RERGREKGRRRSRSVSPRKQRRS 197
RER RE+ R R R + PRK+ RS
Sbjct: 136 RERERERERERERDLVPRKRLRS 204
Score = 44.3 bits (103), Expect = 9e-05
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 97 RVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRER-NSRYSDRDRDRDRD- 154
R E+ R+ +R + R R R RER R+R+ R R R RER R +R+R+R+RD
Sbjct: 4 RERERERERERERERERERERERERERERERERE-RERERERERERERERERERERERDL 180
Query: 155 SGRSRSRS 162
R R RS
Sbjct: 181 VPRKRLRS 204
Score = 34.7 bits (78), Expect = 0.070
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
+ +R+ + + + + +++ R E+ R+ +R + R R R RER R+RD
Sbjct: 7 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERDLVP 186
Query: 134 RSRSR 138
R R R
Sbjct: 187 RKRLR 201
>TC208252 weakly similar to UP|Q9HCC8 (Q9HCC8) Osteoblast differentiation
promoting factor (AESP1935), partial (4%)
Length = 635
Score = 56.2 bits (134), Expect = 2e-08
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Frame = +3
Query: 61 SSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKT----NRDYSSRDSDRRKR 116
S T TT+ D+D S+ + Q + ++ ESR +KT RDYSS S +
Sbjct: 3 SGNNKTKGTTS-QDNDSSSEEERSQKRSNREKYDESR-KDKTPVTRGRDYSS-SSSLEEE 173
Query: 117 RSRSRSR-ERYRDRDSRRRSRS-RERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK 174
RSR RSR +R++ D+ S S +R R+S R + R + S R +SRS+ R + R+
Sbjct: 174 RSRKRSRHQRHKRHDAGSHSSSDDDRRDRHSSRSKGRRKGSSREKSRSEKHSKRHKHRKH 353
Query: 175 RERGREK--GRRRSRSVSPRKQRRSE 198
R + S S +++RR E
Sbjct: 354 ESPNRSSRYSNEKDSSHSRKEKRRRE 431
Score = 44.7 bits (104), Expect = 7e-05
Identities = 34/113 (30%), Positives = 52/113 (45%)
Frame = +3
Query: 95 ESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRD 154
E R +++NR+ D R+ + +R R+ Y S RSR+R S R + D
Sbjct: 60 EERSQKRSNRE--KYDESRKDKTPVTRGRD-YSSSSSLEEERSRKR----SRHQRHKRHD 218
Query: 155 SGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKER 207
+G S S SD DR R +GR KG R +S S + +R + + + R
Sbjct: 219 AG---SHSSSDDDRRDRHSSRSKGRRKGSSREKSRSEKHSKRHKHRKHESPNR 368
Score = 33.9 bits (76), Expect = 0.12
Identities = 28/95 (29%), Positives = 40/95 (41%), Gaps = 3/95 (3%)
Frame = +3
Query: 127 RDRDS---RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGR 183
+D DS RS+ R +Y + +D+ + R R S S RKR R + R
Sbjct: 36 QDNDSSSEEERSQKRSNREKYDESRKDKTPVT-RGRDYSSSSSLEEERSRKRSRHQRHKR 212
Query: 184 RRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKN 218
+ S S R + SS K R KGS K ++
Sbjct: 213 HDAGSHSSSDDDRRDRHSSRSKGRRKGSSREKSRS 317
Score = 33.5 bits (75), Expect = 0.16
Identities = 24/95 (25%), Positives = 40/95 (41%), Gaps = 4/95 (4%)
Frame = +3
Query: 130 DSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSD---VDRGRDRRKRER-GREKGRRR 185
+++ + + + N S+ +R + R + S D V RGRD E+ R+R
Sbjct: 9 NNKTKGTTSQDNDSSSEEERSQKRSNREKYDESRKDKTPVTRGRDYSSSSSLEEERSRKR 188
Query: 186 SRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVG 220
SR ++ SSD R + S KG+ G
Sbjct: 189 SRHQRHKRHDAGSHSSSDDDRRDRHSSRSKGRRKG 293
>TC232471 similar to UP|NLFE_HUMAN (P18615) Negative elongation factor E
(NELF-E) (RD protein), partial (11%)
Length = 480
Score = 55.8 bits (133), Expect = 3e-08
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Frame = +3
Query: 29 FSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQ-SIQNK 87
F+ +S A+ + S +S S F + AST+ P + + Q ++Q +
Sbjct: 33 FTPLSSPPAITQAISLSLSLSLFHIMKRSNDDVAAPVPASTSKPVFLTKAQREQLALQRR 212
Query: 88 LKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDR 147
++ + R + +R++SS + S R R+R RDRD R DR
Sbjct: 213 QEEVADQKRRQEQLLSRNHSSDP-----KPSSDRDRDRERDRDHHR------------DR 341
Query: 148 DRDRDRDSGRSRSRSDSDVDRGRDRRKRERGRE---KGRRRSR 187
DRDRDRD R R R+ D DR +RR RER RE + R R+R
Sbjct: 342 DRDRDRDRERERERA-RDRDREAERRNREREREEESRARERAR 467
Score = 55.8 bits (133), Expect = 3e-08
Identities = 41/121 (33%), Positives = 55/121 (44%), Gaps = 1/121 (0%)
Frame = +3
Query: 34 SNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKS-QLQSIQNKLKKKP 92
SND V P + S FL+ KA +D R+ QL S + KP
Sbjct: 117 SNDDVAAPVPASTSKPVFLT---KAQREQLALQRRQEEVADQKRRQEQLLSRNHSSDPKP 287
Query: 93 TTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRD 152
+++ + +RD+ RD DR + R R R RER RDRD R+RER R R+R
Sbjct: 288 SSDRDRDRERDRDHH-RDRDRDRDRDRERERERARDRDREAERRNREREREEESRARERA 464
Query: 153 R 153
R
Sbjct: 465 R 467
Score = 51.6 bits (122), Expect = 6e-07
Identities = 33/96 (34%), Positives = 48/96 (49%)
Frame = +3
Query: 114 RKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRR 173
++R+ ++R +++ R S + S DRDR+RDRD R R R DR RD
Sbjct: 204 QRRQEEVADQKRRQEQLLSRNHSSDPKPSSDRDRDRERDRDHHRDRDR-----DRDRD-- 362
Query: 174 KRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGK 209
RER RE+ R R R R + R + S +ER +
Sbjct: 363 -RERERERARDRDREAERRNREREREEESRARERAR 467
Score = 32.0 bits (71), Expect = 0.46
Identities = 35/104 (33%), Positives = 42/104 (39%), Gaps = 1/104 (0%)
Frame = -3
Query: 114 RKRRSRSRSRERYRDRDSRRRSRSRERNSRYS-DRDRDRDRDSGRSRSRSDSDVDRGRDR 172
R R S SRS R SR RSR+ R+ S R R R R RS S S S + G
Sbjct: 454 RARLSSSRSLSLLRRSASRSRSRALSRSRSLSLSRSRSRSRWWSRSLSLSLSRSEEGLGS 275
Query: 173 RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKG 216
+ R R RR S + +R S R G E+ G
Sbjct: 274 EEWLRERSCSWRRFWSATSSWRRWRANCSRWALVRNTGLEVEAG 143
Score = 28.5 bits (62), Expect = 5.0
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Frame = -3
Query: 117 RSRSRSR-ERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSR----------SDSD 165
R+RSR+R R RRS SR R SR R R RSRSR S S+
Sbjct: 466 RARSRARLSSSRSLSLLRRSASRSR-SRALSRSRSLSLSRSRSRSRWWSRSLSLSLSRSE 290
Query: 166 VDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKG 216
G + RER R S + S R+ R + + + V+ G E G
Sbjct: 289 EGLGSEEWLRERSCSWRRFWSATSSWRRWRANCSRWALVRNTGLEVEAGTG 137
>TC228858 weakly similar to UP|Q9W0H4 (Q9W0H4) CG2469-PA (Cg2469-pb)
(LD24034p), partial (5%)
Length = 811
Score = 55.5 bits (132), Expect = 4e-08
Identities = 45/103 (43%), Positives = 54/103 (51%), Gaps = 3/103 (2%)
Frame = +1
Query: 107 SSRDSDRRKR-RSRSRSRERYRDRD-SRRRSRSRERN-SRYSDRDRDRDRDSGRSRSRSD 163
++RD + R RS S S ER R D SR SRSR R+ SR R R R R R RSRS
Sbjct: 109 NTRDVSYKGRGRSYSLSPERVRTWDYSRSSSRSRSRSRSRSWSRGRSRSRSWSRGRSRSY 288
Query: 164 SDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKE 206
S R R R RGR R SRS S ++ RS+ + D K+
Sbjct: 289 SRSISPRRNRSRSRGRSYSRSHSRSPSYDRRNRSDQQLPDQKD 417
Score = 37.4 bits (85), Expect = 0.011
Identities = 34/91 (37%), Positives = 41/91 (44%), Gaps = 7/91 (7%)
Frame = +1
Query: 112 DRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRD 171
DR R + R R R ++R S S +R R D RS SRS S R R
Sbjct: 55 DRYNMDGRGQGRGRGRFDNTRDVSYKGRGRSYSLSPERVRTWDYSRSSSRSRS---RSRS 225
Query: 172 R-----RKRERGREKGRRR--SRSVSPRKQR 195
R R R R +GR R SRS+SPR+ R
Sbjct: 226 RSWSRGRSRSRSWSRGRSRSYSRSISPRRNR 318
>TC225004
Length = 734
Score = 55.1 bits (131), Expect = 5e-08
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = -3
Query: 58 ASSSSTTTTASTTAP-SDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
+SSS+ +TAS P ++ + + + + + +++ R E+ R+ +R +
Sbjct: 600 SSSSADFSTASFLPPRAEFGTRRERERERERERERERERERERERERERERERERERERE 421
Query: 117 RSRSRSRERYRDRDSRRRSRSRER-NSRYSDRDRDRDRDSGRSRSRS-DSDVDRGRDRR 173
R R R RER R+R+ R R R RER R +R+R+R+R+ R R R + ++R DR+
Sbjct: 420 RERERERERERERE-REREREREREREREREREREREREREREREREREIVIERETDRK 247
Score = 46.6 bits (109), Expect = 2e-05
Identities = 28/91 (30%), Positives = 47/91 (50%), Gaps = 1/91 (1%)
Frame = -2
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD-SR 132
+ +R+ + + + + +++ R E+ R+ +R + R R R RER R+R+ R
Sbjct: 481 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 302
Query: 133 RRSRSRERNSRYSDRDRDRDRDSGRSRSRSD 163
R R RER+S Y +RDR + R SR D
Sbjct: 301 ERERERERDS-YRERDR*KMRVRWLRNSRQD 212
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.307 0.123 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,443,772
Number of Sequences: 63676
Number of extensions: 179869
Number of successful extensions: 6670
Number of sequences better than 10.0: 637
Number of HSP's better than 10.0 without gapping: 4356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5612
length of query: 369
length of database: 12,639,632
effective HSP length: 99
effective length of query: 270
effective length of database: 6,335,708
effective search space: 1710641160
effective search space used: 1710641160
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146914.1