Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146866.3 + phase: 0 
         (482 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC224112                                                              239  3e-63
TC227415 similar to UP|Q9LVD9 (Q9LVD9) Gb|AAC28507.1, partial (89%)   177  3e-55
BM143551                                                              175  5e-44
AW100396                                                              166  3e-41
TC230597 weakly similar to GB|AAP31960.1|30387589|BT006616 At1g1...   159  2e-39
TC209152 weakly similar to PIR|B96764|B96764 protein integral me...   145  3e-35
TC210208                                                              139  2e-33
TC232264 weakly similar to UP|Q941E1 (Q941E1) At1g66760/F4N21_11...   106  2e-29
TC231476 weakly similar to GB|AAP31960.1|30387589|BT006616 At1g1...   102  3e-22
TC232933 similar to GB|AAN73299.1|25141209|BT002302 At3g26590/MF...    99  4e-21
TC208799 weakly similar to UP|Q9LP32 (Q9LP32) T9L6.1 protein, pa...    97  2e-20
TC218592 weakly similar to UP|Q9LP32 (Q9LP32) T9L6.1 protein, pa...    96  3e-20
AW755444                                                               91  1e-18
TC223613 weakly similar to UP|Q9FNC1 (Q9FNC1) Emb|CAB89401.1, pa...    91  1e-18
TC213740 weakly similar to UP|TT12_ARATH (Q9LYT3) TRANSPARENT TE...    89  6e-18
TC230919                                                               84  1e-16
BU763147 weakly similar to GP|15810018|gb AT5g38030/F16F17_30 {A...    82  4e-16
TC227722                                                               73  3e-13
AW597030 similar to SP|Q9LYT3|TT12 TRANSPARENT TESTA 12 protein....    73  3e-13
TC213328 similar to UP|Q9LVD9 (Q9LVD9) Gb|AAC28507.1, partial (27%)    72  4e-13

>TC224112 
          Length = 708

 Score =  239 bits (609), Expect = 3e-63
 Identities = 116/193 (60%), Positives = 144/193 (74%), Gaps = 6/193 (3%)
 Frame = +1

Query: 253 VFPSSLSLGVSTRIGNELGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFT 312
           +FPSSLS  VSTR+GN+LGA +P KAR+S IV L  + + G+ A++F  ++RN W   FT
Sbjct: 1   IFPSSLSFSVSTRVGNKLGAQKPSKARLSAIVGLSCSFMSGVLALVFALMVRNTWASMFT 180

Query: 313 NDREILELTSIVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIF 372
            D++I+ LTS+VLPI+GLCELGNCPQTTGCGVLRG+ARP +GANINLG FYLVGMPV+I+
Sbjct: 181 KDKDIITLTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVSIW 360

Query: 373 LGFVAKLGFPGLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQRAKELT------KSSTTSD 426
           L F     F GLW+GLLAAQGSCA+ MLVVLCRTDW  + QRAK+LT           S 
Sbjct: 361 LAFFTGYDFQGLWLGLLAAQGSCAVTMLVVLCRTDWEFEAQRAKKLTGMGGAASGVDQSR 540

Query: 427 DVDAKLPIFMEGN 439
           +VD + P+  E N
Sbjct: 541 EVDPEKPLKHESN 579


>TC227415 similar to UP|Q9LVD9 (Q9LVD9) Gb|AAC28507.1, partial (89%)
          Length = 1748

 Score =  177 bits (448), Expect(2) = 3e-55
 Identities = 96/348 (27%), Positives = 182/348 (51%), Gaps = 1/348 (0%)
 Frame = +2

Query: 74  ISFIWINMKRILLFSGQDLEISSMAQSFILFLVPDLFLLSILHPLRIYLRTQGITLPLTY 133
           ++ I++  + +L+F G+   I+S A  F+  L+P +F  +   P++ +L+ Q I  P  Y
Sbjct: 548 LTVIYVFSEPMLIFLGESPRIASAAALFVYGLIPQIFAYAANFPIQKFLQAQSIVAPSAY 727

Query: 134 CSAVSVLLHIPLNFLLVVHFQMGIAGVSIAMVLTNLNLVILLSSFLYFSSVYKKSWISPS 193
            SA ++++H+ ++++ V    +G+ G S+ + L+   +VI    ++  S   +++W   +
Sbjct: 728 ISAATLVVHLGMSWVAVYEIGLGLLGASLVLSLSWWIMVIGQYVYIVKSERCRRTWQGFT 907

Query: 194 LDCIKGWSSLLSLAIPTCVSVCLEWWWYEFMIMMCGLLVNPKATIASMGILIQTTSLVYV 253
            +   G      L+  + V +CLE W+++ ++++ GLL NP+  + S+ I    +  V++
Sbjct: 908 WEAFSGLYGFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICTTISGWVFM 1087

Query: 254 FPSSLSLGVSTRIGNELGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTN 313
                +   S R+ NELGA  P+ A  S++V   ++ ++ + A L    +R+     FT 
Sbjct: 1088ISVGFNAAASVRVSNELGARSPKSASFSVVVVTVISFIISVIAALVVLALRDVISYAFTG 1267

Query: 314 DREILELTSIVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFL 373
             E+    S + P++ L  + N  Q    GV  G       A +N+G +Y VG+P+   L
Sbjct: 1268GEEVAAAVSDLCPLLALSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYGVGIPLGAVL 1447

Query: 374 GFVAKLGFPGLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQR-AKELTK 420
           GF  + G  G+W+G+L       +++L V  RTDW  +V+  AK LTK
Sbjct: 1448GFYFQFGAKGIWLGMLGGTVMQTIILLWVTFRTDWTKEVEEAAKRLTK 1591



 Score = 57.0 bits (136), Expect(2) = 3e-55
 Identities = 26/67 (38%), Positives = 44/67 (64%)
 Frame = +1

Query: 1   MISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTL 60
           M + IF G+LG +ELA  SL      +  Y ++ G+   +E +CGQA+GA+++ +LG+ +
Sbjct: 328 MSTQIFSGHLGNLELAAASLGNTGIQMFAYGLMLGMGSAVETLCGQAFGAQKYGMLGVYM 507

Query: 61  QRTVLLL 67
           QR+ +LL
Sbjct: 508 QRSTILL 528


>BM143551 
          Length = 428

 Score =  175 bits (443), Expect = 5e-44
 Identities = 84/120 (70%), Positives = 93/120 (77%)
 Frame = +2

Query: 307 WGKFFTNDREILELTSIVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVG 366
           W   FT D EI+ LTS+VLPI+GLCELGNCPQTT CGVLRG+ARP +GANINLG FYLVG
Sbjct: 8   WASMFTRDAEIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVG 187

Query: 367 MPVAIFLGFVAKLGFPGLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQRAKELTKSSTTSD 426
           MPVA+ L F A   F GLW+GLLAAQ SC   ML+VL RT+W  QVQRAKELT SS   D
Sbjct: 188 MPVAVRLSFFAGFDFKGLWLGLLAAQASCMFTMLIVLARTNWEGQVQRAKELTSSSEEQD 367


>AW100396 
          Length = 426

 Score =  166 bits (419), Expect = 3e-41
 Identities = 83/139 (59%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
 Frame = -3

Query: 270 LGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREILELTSIVLPIVG 329
           LGA +P KA  S IV L  + +LG+ A++FT L+R+ W   FT D+EI+ LTS VLP++G
Sbjct: 424 LGAQKPSKAEFSSIVGLSCSFMLGVFALVFTILVRHIWANMFTQDKEIITLTSFVLPVIG 245

Query: 330 LCE-LGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAKLGFPGLWIGL 388
           L +   +  +  GCGVLRG+ARP +GANINLG FYLVGMPVA++LGF A   F GLW+GL
Sbjct: 244 LLQPWEHVLKQPGCGVLRGTARPKVGANINLGCFYLVGMPVAVWLGFFAGFDFQGLWLGL 65

Query: 389 LAAQGSCAMLMLVVLCRTD 407
           LAAQGSCA+ MLVVL RTD
Sbjct: 64  LAAQGSCAVTMLVVLSRTD 8


>TC230597 weakly similar to GB|AAP31960.1|30387589|BT006616 At1g15170
           {Arabidopsis thaliana;} , partial (51%)
          Length = 1061

 Score =  159 bits (403), Expect = 2e-39
 Identities = 92/305 (30%), Positives = 156/305 (50%), Gaps = 51/305 (16%)
 Frame = +3

Query: 1   MISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTL 60
           ++S + +G+LGE+ L+  +L+I  + +TG+S++ G+A G+E ICGQAYG +Q++ +G+  
Sbjct: 144 VVSTMIVGHLGELYLSSAALAISLSGVTGFSLLMGMASGLETICGQAYGGQQYQRIGIQT 323

Query: 61  QRTVLLLLSTSIPISFIWINMKRILLFSGQDLEISSMAQSFILFLVPDLFLLSILHPLRI 120
              +  L+  SIP+S +WINM+ IL+F GQD  IS  A  F ++LVP LF  +IL PL  
Sbjct: 324 YTAIFSLILVSIPVSLLWINMETILVFIGQDPLISHEAGKFTIWLVPALFAYAILQPLVR 503

Query: 121 YLRTQGITLPLTYCSAVSVLLHIPLNFLLVVHFQMGIAGVSIAMVLTNLNLVILLSSFLY 180
           Y + Q + LP+   S V++++H+PL + LV   ++   G ++A+ ++  + VI L  ++ 
Sbjct: 504 YFQVQSLLLPMFASSCVTLIIHVPLCWALVFKTRLSNVGGALAVSISIWSNVIFLGLYMR 683

Query: 181 FSSVYKKSWISPSLDCIKGWSSLLSLAIPTCVSV-------------------------- 214
           + S   K+    S++  KG       AIP+ V V                          
Sbjct: 684 YFSACAKTRAPISMELFKGMWEFFRFAIPSAVMVW*LFFLFNQYFTYSCYQITKSFLVQQ 863

Query: 215 -------------------------CLEWWWYEFMIMMCGLLVNPKATIASMGILIQTTS 249
                                     LEWW YE ++++ GLL NP+   + + +     S
Sbjct: 864 IFYNVLYCFSKTSI*HNFCIHVDDGSLEWWSYELLVLLSGLLPNPQLETSVLSVW-YVCS 1040

Query: 250 LVYVF 254
           ++ VF
Sbjct: 1041IILVF 1055


>TC209152 weakly similar to PIR|B96764|B96764 protein integral membrane
           protein F25P22.12 [imported] - Arabidopsis thaliana
           {Arabidopsis thaliana;} , partial (41%)
          Length = 1166

 Score =  145 bits (367), Expect = 3e-35
 Identities = 81/271 (29%), Positives = 144/271 (52%), Gaps = 2/271 (0%)
 Frame = +1

Query: 149 LVVHFQMGIAGVSIAMVLTNLNLVILLSSFLYFSSVYKKSWISPSLDCIKGWSSLLSLAI 208
           LV    +G  G ++A+ ++    V+ L+ ++ +S   +K+ I  S + +      L LAI
Sbjct: 13  LVFKLGLGHVGAALAIGVSYWLNVVWLAIYMIYSPACQKTKIVFSSNALLSIPEFLKLAI 192

Query: 209 PTCVSVCLEWWWYEFMIMMCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRIGN 268
           P+ +  C EWW +E + ++ G+L NP+   A + I + TT+L Y  P ++    STR+ N
Sbjct: 193 PSGLMFCFEWWSFEVLTLLAGILPNPQLETAVLSICLNTTTLHYFIPYAVGASASTRVSN 372

Query: 269 ELGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREILELTSIVLPIV 328
           ELGA  P+ A+ ++ V + L +             R+  G  ++ND+E+++  + + P+ 
Sbjct: 373 ELGAGNPKTAKGAVRVVVILGVAEAAIVSTVFISCRHVLGYAYSNDKEVIDYVAEMAPL- 549

Query: 329 GLCELGNCPQTTGC--GVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAKLGFPGLWI 386
            LC         G   G+ RG     IGA +NLG++YLVG+P+ + LGF  +L   GLW+
Sbjct: 550 -LCVSVTADSLIGALSGIARGGGFQEIGAYVNLGAYYLVGIPMGLLLGFHLQLRAKGLWM 726

Query: 387 GLLAAQGSCAMLMLVVLCRTDWNLQVQRAKE 417
           G L+   +  +++ +V    DW  +  +A+E
Sbjct: 727 GTLSGSLTQVIILAIVTALIDWQKEATKARE 819


>TC210208 
          Length = 743

 Score =  139 bits (351), Expect = 2e-33
 Identities = 82/253 (32%), Positives = 136/253 (53%)
 Frame = +2

Query: 182 SSVYKKSWISPSLDCIKGWSSLLSLAIPTCVSVCLEWWWYEFMIMMCGLLVNPKATIASM 241
           S  +K++W   S    +   + + LA+P+   VCLE+W +E ++ + GL+ + + T + +
Sbjct: 14  SKKFKQTWKGFSTHSFRYVFTNMRLALPSAAMVCLEYWAFEVLVFLAGLMPDSQITTSLI 193

Query: 242 GILIQTTSLVYVFPSSLSLGVSTRIGNELGANRPQKARISMIVSLFLAMVLGLGAMLFTT 301
            I I T  + Y+    LS   STR+ NELGA  P++A+ +M V+L L+++LGL  +L   
Sbjct: 194 AICINTEFIAYMITYGLSAAASTRVSNELGAGNPERAKHAMSVTLKLSLLLGLCFVLALG 373

Query: 302 LMRNQWGKFFTNDREILELTSIVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGS 361
              N W +FF++   I +  + V P++ +  L +  Q    GV RG     + A INL +
Sbjct: 374 FGHNIWIQFFSDSSTIKKEFASVTPLLAISILLDAIQGVLSGVSRGCGWQHLAAYINLAT 553

Query: 362 FYLVGMPVAIFLGFVAKLGFPGLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQRAKELTKS 421
           FYL+G+P++ FLGF   L + GLWIGL+            +LC++       R K  TK 
Sbjct: 554 FYLIGLPISCFLGFKTNLQYKGLWIGLICG----------LLCQSGTLFLFIRRKXWTKL 703

Query: 422 STTSDDVDAKLPI 434
             + D+ D + P+
Sbjct: 704 DLSRDN-DKERPL 739


>TC232264 weakly similar to UP|Q941E1 (Q941E1) At1g66760/F4N21_11, partial
           (58%)
          Length = 701

 Score =  106 bits (265), Expect(2) = 2e-29
 Identities = 50/152 (32%), Positives = 94/152 (60%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   MISMIFLGYLGEM-ELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLT 59
           ++S++ +G+ G +   +G +++  FA +TG+SV+ G++  +E +CGQ YGA++++  G  
Sbjct: 58  VVSLMMVGHFGILVSFSGVAIATSFAEVTGFSVLLGMSGALETLCGQTYGAEEYRKFGNY 237

Query: 60  LQRTVLLLLSTSIPISFIWINMKRILLFSGQDLEISSMAQSFILFLVPDLFLLSILHPLR 119
               ++ L    +PIS +WI   +ILL   QD EIS  A+ + ++L+P LF  ++L  L 
Sbjct: 238 TWCAIVTLTLVCLPISLVWIFTDKILLLFSQDPEISHAAREYCIYLIPALFGHAVLQALT 417

Query: 120 IYLRTQGITLPLTYCSAVSVLLHIPLNFLLVV 151
            Y +TQ +  P+ + S  ++ LH+P+ + LV+
Sbjct: 418 RYFQTQSMIFPMVFSSITALCLHVPICWSLVL 513



 Score = 40.8 bits (94), Expect(2) = 2e-29
 Identities = 18/60 (30%), Positives = 34/60 (56%)
 Frame = +2

Query: 172 VILLSSFLYFSSVYKKSWISPSLDCIKGWSSLLSLAIPTCVSVCLEWWWYEFMIMMCGLL 231
           V+ L+ ++ +S   +K+ I  S + +      L LAIP+ +  C EWW +E + ++ G+L
Sbjct: 521 VVWLAIYMIYSPACQKTKIVFSSNALLSIPEFLKLAIPSGLMFCFEWWSFEVLTLLAGIL 700


>TC231476 weakly similar to GB|AAP31960.1|30387589|BT006616 At1g15170
           {Arabidopsis thaliana;} , partial (32%)
          Length = 734

 Score =  102 bits (255), Expect = 3e-22
 Identities = 57/188 (30%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
 Frame = +2

Query: 241 MGILIQTTSLVYVFPSSLSLGVSTRIGNELGANRPQKARISMIVSLFLAMVLGLGAMLFT 300
           + I + T S ++  P  ++   STRI NELGA  P  A ++++ ++  A++         
Sbjct: 8   LSICLNTISTLFSIPFGIAAAASTRISNELGAGNPHAAHVAVLAAMSFAIMETAIVSGTL 187

Query: 301 TLMRNQWGKFFTNDREILELTSIVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLG 360
            + R+ +G  F+N++E+++  +++ P++ +  + +  Q    GV RG     IG  +NLG
Sbjct: 188 FVCRHDFGYIFSNEKEVVDYVTVMAPLICISVILDSIQGVLAGVARGCGWQHIGVYVNLG 367

Query: 361 SFYLVGMPVAIFLGFVAKLGFPGLWIGL-LAAQGSCAMLMLVVLCRTDWNLQVQRAKELT 419
           +FYL G+PVA  L F+AK+   GLWIG+ + A   C +   +  C  +W  Q  +A++  
Sbjct: 368 AFYLCGIPVAATLAFLAKMRGKGLWIGVQVGAFVQCILFSTITSC-INWEQQAIKARKRL 544

Query: 420 KSSTTSDD 427
             S  S D
Sbjct: 545 FDSEISAD 568


>TC232933 similar to GB|AAN73299.1|25141209|BT002302 At3g26590/MFE16_11
           {Arabidopsis thaliana;} , partial (30%)
          Length = 545

 Score = 99.0 bits (245), Expect = 4e-21
 Identities = 47/158 (29%), Positives = 89/158 (55%)
 Frame = +1

Query: 263 STRIGNELGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREILELTS 322
           S R+ NELGA+ P+ A+ S++V++  + ++G+   +   + RN +  FF+ND E+  +  
Sbjct: 55  SVRVSNELGASHPRTAKFSLLVAMITSTLIGVMLSMVLIIFRNHYPFFFSNDSEVRAMVV 234

Query: 323 IVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAKLGFP 382
            + P++ LC + N  Q    GV  G+    + A +N+  +YL G+P+ + LG+   +G  
Sbjct: 235 ELTPMLALCIVINNVQPVLSGVAVGAGWQALVAYVNIACYYLFGIPLGLVLGYKLDMGVM 414

Query: 383 GLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQRAKELTK 420
           G+W G+L+       ++  ++ RTDWN +   A++  K
Sbjct: 415 GIWSGMLSGTILQTCVLFFLVYRTDWNKEASLAEDRIK 528



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 19/164 (11%)
 Frame = +1

Query: 56  LGLTLQRTVLL-LLSTSIPISFIWINMKRILL--------FSGQDLEISSMAQSFILFLV 106
           LG +  RT    LL   I  + I + +  +L+        F   D E+ +M    ++ L 
Sbjct: 76  LGASHPRTAKFSLLVAMITSTLIGVMLSMVLIIFRNHYPFFFSNDSEVRAM----VVELT 243

Query: 107 PDLFLLSILHPLRIYLRTQGITLPLTYCSAVSV-------LLHIPLNFLLVVHFQMGIAG 159
           P L L  +++ ++  L   G+ +   + + V+        L  IPL  +L     MG+ G
Sbjct: 244 PMLALCIVINNVQPVL--SGVAVGAGWQALVAYVNIACYYLFGIPLGLVLGYKLDMGVMG 417

Query: 160 VSIAMVLTNLNLVILLSSFLYFSSVYKKSW---ISPSLDCIKGW 200
           +   M    L+  IL +  L+F  VY+  W    S + D IK W
Sbjct: 418 IWSGM----LSGTILQTCVLFF-LVYRTDWNKEASLAEDRIKQW 534


>TC208799 weakly similar to UP|Q9LP32 (Q9LP32) T9L6.1 protein, partial (46%)
          Length = 924

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 58/222 (26%), Positives = 107/222 (48%)
 Frame = +2

Query: 224 MIMMCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRIGNELGANRPQKARISMI 283
           ++++ G + N +  I ++ I +       +         S R+ NELG    + A+ S+I
Sbjct: 14  LVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVANELGRGSAKAAKFSII 193

Query: 284 VSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREILELTSIVLPIVGLCELGNCPQTTGCG 343
           VS+  ++ +G    +F    R +    FT+++E+      + P++ +  L N  Q    G
Sbjct: 194 VSVLTSLAIGFLLFIFFLFFRERLAYIFTSNKEVAFAVGDLSPLLSVSILLNSVQPVLSG 373

Query: 344 VLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAKLGFPGLWIGLLAAQGSCAMLMLVVL 403
           V  G+   +I A +N+G +Y +G+PV I LG V  L   G+WIG+L       ++++V+ 
Sbjct: 374 VAIGAGWQSIVAYVNMGCYYAIGIPVGIVLGNVLDLQVKGIWIGMLFGTLIQTIVLIVIT 553

Query: 404 CRTDWNLQVQRAKELTKSSTTSDDVDAKLPIFMEGNVNKNNV 445
            +T+W+ QV  A++     +  D  D       E  V + NV
Sbjct: 554 YKTNWDEQVTIAQKRISRWSKVDSPD------HENEVERKNV 661


>TC218592 weakly similar to UP|Q9LP32 (Q9LP32) T9L6.1 protein, partial (37%)
          Length = 715

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 51/174 (29%), Positives = 93/174 (53%), Gaps = 9/174 (5%)
 Frame = +3

Query: 263 STRIGNELGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREILELTS 322
           S R+ NELG    + A+ S++V++  ++ +G    LF   +R +    FT+++++ +   
Sbjct: 27  SVRVANELGKGSSKAAKFSIVVTVLTSLAIGFVLFLFFLFLRGKLAYIFTSNKDVADAVG 206

Query: 323 IVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAKLGFP 382
            + P++ +  L N  Q    GV  G+   +I A +N+G +Y++G+PV + LG V  L   
Sbjct: 207 DLSPLLAISILLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYIIGIPVGVVLGNVLNLQVK 386

Query: 383 GLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQRAK---------ELTKSSTTSDD 427
           G+WIG+L       +++ V+  +TDW+ QV +A+         E    + TSDD
Sbjct: 387 GIWIGMLFGTFIQTVVLTVITYKTDWDEQVTKARNRINKWSKVESDHETITSDD 548


>AW755444 
          Length = 432

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 47/143 (32%), Positives = 80/143 (55%)
 Frame = +1

Query: 137 VSVLLHIPLNFLLVVHFQMGIAGVSIAMVLTNLNLVILLSSFLYFSSVYKKSWISPSLDC 196
           V ++LHIP+ ++LV    +G  G +I++ ++    V+LL  +  +    +K+ I+   + 
Sbjct: 1   VVLVLHIPICWVLVFGLGLGQNGAAISIGISYWLSVMLLLIYTKYYPSCQKTKIALGSNA 180

Query: 197 IKGWSSLLSLAIPTCVSVCLEWWWYEFMIMMCGLLVNPKATIASMGILIQTTSLVYVFPS 256
           ++       LAIP+ + +C EWW +E ++++ GLL NPK   + + I +   +L Y  P 
Sbjct: 181 LRSIKEFFFLAIPSALMICFEWWSFELVVILAGLLPNPKLETSVLSICLNICTLHYFIPY 360

Query: 257 SLSLGVSTRIGNELGANRPQKAR 279
                VSTR+ NEL A RPQ AR
Sbjct: 361 GTGAAVSTRVSNELXARRPQAAR 429


>TC223613 weakly similar to UP|Q9FNC1 (Q9FNC1) Emb|CAB89401.1, partial (15%)
          Length = 460

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 41/135 (30%), Positives = 88/135 (64%)
 Frame = +1

Query: 32  VISGLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPISFIWINMKRILLFSGQD 91
           ++ G+A+ +  +CGQAYGAK++ ++G+ LQR+ ++L  ++I +  ++I    IL   GQD
Sbjct: 7   ILLGMAIALSTLCGQAYGAKEYDMMGVYLQRSWIVLFLSAICLLPLFIFTSPILTLLGQD 186

Query: 92  LEISSMAQSFILFLVPDLFLLSILHPLRIYLRTQGITLPLTYCSAVSVLLHIPLNFLLVV 151
             I+ +A++  ++ +P LF   + +  + +L++Q   + ++Y +A+S+++H+ L++L  +
Sbjct: 187 ESIAQVARTISIWSIPVLFAYIVSNSCQTFLQSQSKNVIISYLAALSIIIHVSLSWLFTM 366

Query: 152 HFQMGIAGVSIAMVL 166
            F+ GI G  I+ +L
Sbjct: 367 QFKYGIPGAMISTIL 411


>TC213740 weakly similar to UP|TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12
           protein, partial (20%)
          Length = 733

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 43/157 (27%), Positives = 86/157 (54%)
 Frame = +3

Query: 258 LSLGVSTRIGNELGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREI 317
           ++  +S R+ N LG + P+ A  S  V++F +++LG+  M      ++++ K FT+  ++
Sbjct: 39  INTAISVRVSNTLGMSHPRAAIYSFCVTMFQSLLLGILFMTVIFFSKDEFAKIFTDSEDM 218

Query: 318 LELTSIVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVA 377
           +   + +  ++G+  + N       GV  GS    +   INL  +Y+VG+P+ IFLGF  
Sbjct: 219 ILAAADLAYLLGVTIVLNSASQVMSGVAIGSGWQVMVGYINLACYYIVGLPIGIFLGFKL 398

Query: 378 KLGFPGLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQR 414
            LG  GLW G +       +++  ++ +T+W+ +V++
Sbjct: 399 HLGVKGLWGGTMCGSILQTLVLFTIIWKTNWSKEVEQ 509


>TC230919 
          Length = 1034

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 50/185 (27%), Positives = 98/185 (52%)
 Frame = +2

Query: 35  GLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPISFIWINMKRILLFSGQDLEI 94
           GL+  +E +  Q +GA+++++LG+ LQ + ++ L  SI IS IW   + IL+   Q  +I
Sbjct: 26  GLSGALETLXXQGFGAEEYQMLGIYLQASCIISLIFSIIISIIWFYTEPILVLLHQSQDI 205

Query: 95  SSMAQSFILFLVPDLFLLSILHPLRIYLRTQGITLPLTYCSAVSVLLHIPLNFLLVVHFQ 154
           +     +  FL+P LF LS L  +  +L+TQ +   L   SA+ +L+HI +   L+    
Sbjct: 206 ARTTSLYTKFLIPGLFALSFLQNILRFLQTQSVVKSLVVFSAIPLLVHIFIA*ALIFCTD 385

Query: 155 MGIAGVSIAMVLTNLNLVILLSSFLYFSSVYKKSWISPSLDCIKGWSSLLSLAIPTCVSV 214
           +   G  +A+ ++    + LL  ++ ++  ++++W   S +      + L LA+   +S 
Sbjct: 386 LSFIGAPVAVSISLWISIPLLVMYIMYAERFRQTWTGFSFESFNYIFTDLKLAL---LSA 556

Query: 215 CLEWW 219
            + W+
Sbjct: 557 AMVWY 571


>BU763147 weakly similar to GP|15810018|gb AT5g38030/F16F17_30 {Arabidopsis
           thaliana}, partial (46%)
          Length = 429

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 40/125 (32%), Positives = 79/125 (63%)
 Frame = -3

Query: 40  MEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPISFIWINMKRILLFSGQDLEISSMAQ 99
           +E +CGQA GA +  +LG+ +QR+ +LLLST+  +  ++I   ++L   GQD EIS  A 
Sbjct: 418 LETLCGQAVGAGKLDMLGVYMQRSWVLLLSTACVLCPLYIFAGQVLKLIGQDTEISEAAG 239

Query: 100 SFILFLVPDLFLLSILHPLRIYLRTQGITLPLTYCSAVSVLLHIPLNFLLVVHFQMGIAG 159
           +F ++++P LF  ++  P+  +L+ Q   + +   + ++++LH  L++LL+V  + G+ G
Sbjct: 238 TFAIWMIPQLFAYALNFPVAKFLQAQSKVMVIAAIAGMAMVLHPVLSWLLMVKLEWGLVG 59

Query: 160 VSIAM 164
            ++ +
Sbjct: 58  AAVVL 44


>TC227722 
          Length = 676

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 40/140 (28%), Positives = 72/140 (50%)
 Frame = +1

Query: 278 ARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREILELTSIVLPIVGLCELGNCP 337
           A+ S  V +F ++ LG+  M      R+ +   FTN   + +  + +  ++ +  + N  
Sbjct: 7   AKYSFYVIVFQSLFLGIFFMAIILATRDYYAIIFTNSEVLHKAVAKLGYLLAVTMVLNSV 186

Query: 338 QTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAKLGFPGLWIGLLAAQGSCAM 397
           Q    GV  G     + A IN+G +YL G+P+   LG+ A LG  GLW G++       +
Sbjct: 187 QPVVSGVAIGGGWQALVAYINIGCYYLFGLPLGFLLGYEANLGVEGLWGGMICGIVIQTL 366

Query: 398 LMLVVLCRTDWNLQVQRAKE 417
           L+L++L +T+W  +V++  E
Sbjct: 367 LLLLILYKTNWKKEVEQTTE 426


>AW597030 similar to SP|Q9LYT3|TT12 TRANSPARENT TESTA 12 protein. [Mouse-ear
           cress] {Arabidopsis thaliana}, partial (25%)
          Length = 401

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 38/124 (30%), Positives = 66/124 (52%)
 Frame = +1

Query: 266 IGNELGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREILELTSIVL 325
           + NELGA+ P+ A+ S+ V    ++++ +       + R    K FT+D ++++  S + 
Sbjct: 10  VSNELGASHPRVAKFSVFVVNGTSILISVVFCTIILIFRVSLSKLFTSDSDVIDAVSNLT 189

Query: 326 PIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAKLGFPGLW 385
           P++ +    N  Q    GV  GS    + A +NL S+Y+VG+ V   LGF   LG  G+W
Sbjct: 190 PLLAISVFFNGIQPILSGVAIGSGWQALVAYVNLASYYVVGLTVGCVLGFKTSLGVAGIW 369

Query: 386 IGLL 389
            G++
Sbjct: 370 WGMI 381


>TC213328 similar to UP|Q9LVD9 (Q9LVD9) Gb|AAC28507.1, partial (27%)
          Length = 423

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 34/138 (24%), Positives = 71/138 (50%)
 Frame = +3

Query: 89  GQDLEISSMAQSFILFLVPDLFLLSILHPLRIYLRTQGITLPLTYCSAVSVLLHIPLNFL 148
           G+   I+S A   +  L+P +F  ++  P++ +L+ Q I  P  Y S  ++L+H+ L++ 
Sbjct: 9   GESPRIASAAALLVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISTATLLVHLVLSYF 188

Query: 149 LVVHFQMGIAGVSIAMVLTNLNLVILLSSFLYFSSVYKKSWISPSLDCIKGWSSLLSLAI 208
           +V    +G+ G S+ + ++   +VI    ++  S   K +W   S     G      L+ 
Sbjct: 189 VVYEVGLGLLGASLVLSVSWWIIVIAQFVYIVKSEKCKHTWRGFSFRAFSGLPEFFKLSA 368

Query: 209 PTCVSVCLEWWWYEFMIM 226
            + V +CLE W+++ +++
Sbjct: 369 ASAVMLCLETWYFQILVL 422


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.326    0.141    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,904,525
Number of Sequences: 63676
Number of extensions: 390012
Number of successful extensions: 3086
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 3028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3078
length of query: 482
length of database: 12,639,632
effective HSP length: 101
effective length of query: 381
effective length of database: 6,208,356
effective search space: 2365383636
effective search space used: 2365383636
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)


Medicago: description of AC146866.3