TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146856.6 - phase: 0 /pseudo
         (335 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AI461133                                                              105  2e-23
BG237292                                                               87  8e-18
TC219790 similar to GB|AAR24650.1|38603810|BT010872 At5g63160 {A...    74  1e-13
BG237220                                                               67  1e-11
TC217907 similar to UP|Q9C5X9 (Q9C5X9) P300/CBP acetyltransferas...    65  3e-11
TC210942                                                               62  3e-10
TC219218 weakly similar to UP|Q7F241 (Q7F241) Speckle-type POZ p...    55  4e-08
TC209396 weakly similar to GB|AAS77485.1|45825155|BT012360 At3g5...    46  2e-05
TC216370                                                               32  0.31
TC216371                                                               32  0.31
TC207701 similar to UP|Q84TR6 (Q84TR6) Subtilase, partial (6%)         28  5.8
TC207529 similar to UP|P93045 (P93045) SNF5 homolog BSH, partial...    28  5.8
TC221519 similar to UP|Q40372 (Q40372) Peroxidase precursor, par...    28  7.6
TC234140                                                               27  10.0

>AI461133 
          Length = 384

 Score =  105 bits (263), Expect = 2e-23
 Identities = 57/123 (46%), Positives = 81/123 (65%)
 Frame = +1

Query: 118 AVRVFIRYLYSSCYEKEEMKEFVLHLLVLSHVYAVPHLKRECEQKLELGLLTMDNLVDVF 177
           AV  F+R+LYSS   +EE+ ++ +HLL LSHVY V  LK+ C + L    LT +++VDV 
Sbjct: 1   AVTAFVRFLYSSRCTEEEIDQYGMHLLALSHVYMVQQLKQRCIKGLT-HRLTTESVVDVL 177

Query: 178 QLALLCDAPRLSLICHRKILKNFRTVSESEGWKAMKQSHPVLEKEILESMIDEENSKKER 237
           QLA LCDAP L L C + + KNF+ V  +EGWK + +  P LE +IL   IDE  ++K++
Sbjct: 178 QLARLCDAPDLHLRCMKLLAKNFKAVEATEGWKFLVKHDPWLELDILR-FIDEHETRKKK 354

Query: 238 IRK 240
            R+
Sbjct: 355 SRR 363


>BG237292 
          Length = 425

 Score = 87.4 bits (215), Expect = 8e-18
 Identities = 45/95 (47%), Positives = 61/95 (63%)
 Frame = +1

Query: 138 EFVLHLLVLSHVYAVPHLKRECEQKLELGLLTMDNLVDVFQLALLCDAPRLSLICHRKIL 197
           ++ +HLL LSHVY VP LK+ C + L    LT +N+VDV QLA LCDAP L L C + + 
Sbjct: 4   KYGMHLLALSHVYIVPQLKQRCIKGLT-HRLTTENVVDVLQLARLCDAPDLHLRCMKLLA 180

Query: 198 KNFRTVSESEGWKAMKQSHPVLEKEILESMIDEEN 232
            NF+ V  +EGWK + +  P LE +IL  + + EN
Sbjct: 181 NNFKAVEATEGWKFLXKHDPCLELDILRFIDEHEN 285


>TC219790 similar to GB|AAR24650.1|38603810|BT010872 At5g63160 {Arabidopsis
           thaliana;} , partial (11%)
          Length = 598

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 30/54 (55%), Positives = 40/54 (73%), Gaps = 1/54 (1%)
 Frame = +3

Query: 283 YTSCKGLELLVRHFAGCKLRVPGGCGHCKRMWQLLELHSRLCADPD-FCRVPLC 335
           + +C+GL++L+RHFA C+ +V GGC  CKRMWQL  LHS +C D D  C+VP C
Sbjct: 3   FATCQGLQVLIRHFATCEKKVRGGCVRCKRMWQLFRLHSYVCHDTDSSCKVPFC 164


>BG237220 
          Length = 450

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 32/80 (40%), Positives = 50/80 (62%)
 Frame = +1

Query: 168 LTMDNLVDVFQLALLCDAPRLSLICHRKILKNFRTVSESEGWKAMKQSHPVLEKEILESM 227
           L+ +N+VDV QL+ LCDAP L L C + +   F+ V E+EGWK ++   P LE ++L  +
Sbjct: 13  LSTENVVDVLQLSRLCDAPDLYLKCVKLLRNRFKAVKETEGWKFLESHDPWLELDVLR-L 189

Query: 228 IDEENSKKERIRKMNEREVY 247
           + E   +K R+RK  E + +
Sbjct: 190 MGELEKRKRRVRKWREEDTF 249


>TC217907 similar to UP|Q9C5X9 (Q9C5X9) P300/CBP acetyltransferase-related
           protein 2, partial (14%)
          Length = 1911

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 39/110 (35%), Positives = 58/110 (52%)
 Frame = +1

Query: 226 SMIDEENSKKERIRKMNEREVYLQLYDAMEALVHICRDGCRTIGPHDKDFKANQPCRYTS 285
           SM D +   KE  R++      +QL   ++ LVH  +  CR+             C+Y +
Sbjct: 421 SMADRDAQNKEA-RQLR----VIQLRKMLDLLVHASQ--CRSAH-----------CQYPN 546

Query: 286 CKGLELLVRHFAGCKLRVPGGCGHCKRMWQLLELHSRLCADPDFCRVPLC 335
           C+ ++ L RH   CK+R  GGC  CK+MW LL+LH+R C + + C VP C
Sbjct: 547 CRKVKGLFRHGMHCKIRASGGCVLCKKMWYLLQLHARACKESE-CHVPRC 693


>TC210942 
          Length = 823

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 26/55 (47%), Positives = 36/55 (65%)
 Frame = +2

Query: 281 CRYTSCKGLELLVRHFAGCKLRVPGGCGHCKRMWQLLELHSRLCADPDFCRVPLC 335
           C+Y +C+ ++ L RH   CK R  GGC  CK+MW LL+LH+R C + + C VP C
Sbjct: 71  CQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESE-CHVPRC 232


>TC219218 weakly similar to UP|Q7F241 (Q7F241) Speckle-type POZ protein-like
           protein, partial (59%)
          Length = 837

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 38/133 (28%), Positives = 64/133 (47%)
 Frame = +1

Query: 96  MLKQANRSNRWRSISIFGVPHDAVRVFIRYLYSSCYEKEEMKEFVLHLLVLSHVYAVPHL 155
           MLK      R  +I I  V +D +  F+ YLY++  E     E   +LLVL   Y V HL
Sbjct: 244 MLKSDMTERRSGTIKISDVSYDTLHAFVNYLYTA--EASLDNELACNLLVLGEKYQVKHL 417

Query: 156 KRECEQKLELGLLTMDNLVDVFQLALLCDAPRLSLICHRKILKNFRTVSESEGWKAMKQS 215
           K  CE+ L +  +  D  +  +  A   +  +L  +    IL +  +++++E +  +  +
Sbjct: 418 KTYCEKYL-IAKMNWDKAISNYAFAYQYNCKQLQSVSLAVILDHMDSLTQNECYAELVDT 594

Query: 216 HPVLEKEILESMI 228
           +P L  EI E+ I
Sbjct: 595 NPRLVVEIYETYI 633


>TC209396 weakly similar to GB|AAS77485.1|45825155|BT012360 At3g56230
           {Arabidopsis thaliana;} , partial (44%)
          Length = 1116

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 28/117 (23%), Positives = 56/117 (46%)
 Frame = +2

Query: 108 SISIFGVPHDAVRVFIRYLYSSCYEKEEMKEFVLHLLVLSHVYAVPHLKRECEQKLELGL 167
           +I+I  + H+ +   + +LYS     E++++ V  L   +  Y +PHL + CE+ L L  
Sbjct: 653 AITIPDLNHEELESLLEFLYSGTLNVEKLEKHVYALSQAADKYVIPHLLKHCERYL-LSS 829

Query: 168 LTMDNLVDVFQLALLCDAPRLSLICHRKILKNFRTVSESEGWKAMKQSHPVLEKEIL 224
           L+  N ++  ++A  C    L       ++KN   +  S  ++A     P L  +++
Sbjct: 830 LSTSNALETLEIADTCSNHNLKETTLNFLVKNIEHMVSSPKFEAFVHRSPHLTVQLV 1000


>TC216370 
          Length = 1349

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 23/86 (26%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
 Frame = +3

Query: 142 HLLVLSHVYAVPHLKRECEQKLELGLLTMDNLVDVFQLALLCDAPRLSLICHRKIL--KN 199
           HLL  +  Y +  L+  CE  L    + ++ +     LA      +L  +C + I   +N
Sbjct: 645 HLLAAADRYGLERLRLMCEASL-CEDVAINTVATTLALAEQHHCFQLKAVCLKFIATSEN 821

Query: 200 FRTVSESEGWKAMKQSHPVLEKEILE 225
            R V +++G++ +K+S P +  E+LE
Sbjct: 822 LRAVMQTDGFEYLKESCPSVLTELLE 899


>TC216371 
          Length = 1127

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 22/86 (25%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
 Frame = +1

Query: 142 HLLVLSHVYAVPHLKRECEQKLELGLLTMDNLVDVFQLALLCDAPRLSLICHRKILK--N 199
           HLL  +  Y +  L+  CE  L    + ++ +     LA      +L  +C + + +  N
Sbjct: 526 HLLAAADRYGLERLRLMCETSL-CEDVAINTVATTLALAEQHHCFQLKAVCLKFVARPEN 702

Query: 200 FRTVSESEGWKAMKQSHPVLEKEILE 225
            R V +++G++ +K+S P +  E+LE
Sbjct: 703 LRAVMQTDGFEYLKESCPSVLTELLE 780


>TC207701 similar to UP|Q84TR6 (Q84TR6) Subtilase, partial (6%)
          Length = 763

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +1

Query: 282 RYTSCKGLELLVRHFAGCKLRVPGGCGHCKRMWQLLELHSR 322
           R++  K LEL   H A   L+    C H  + W    +H +
Sbjct: 133 RFSQRK*LELPFNHIAKSSLKTRNHCSHSHKCWATKHIHCK 255


>TC207529 similar to UP|P93045 (P93045) SNF5 homolog BSH, partial (82%)
          Length = 1265

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 310 CKRMWQLLELHSRLCADP 327
           C+R WQ L+ HS+ C+ P
Sbjct: 484 CRRFWQTLQGHSQSCSSP 431


>TC221519 similar to UP|Q40372 (Q40372) Peroxidase precursor, partial (70%)
          Length = 746

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 17/56 (30%), Positives = 23/56 (40%), Gaps = 12/56 (21%)
 Frame = +2

Query: 281 CRYTSCKGLELLVRHFAGCKLRVPG------------GCGHCKRMWQLLELHSRLC 324
           CRY SC     L  +  GC + VP             GCG C+    +L+L +  C
Sbjct: 407 CRYLSCCS-S*LCSYIGGCTILVPSVTRQKRCNICKQGCGKCQSPSPILQLPTASC 571


>TC234140 
          Length = 526

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 16/51 (31%), Positives = 23/51 (44%)
 Frame = -3

Query: 181 LLCDAPRLSLICHRKILKNFRTVSESEGWKAMKQSHPVLEKEILESMIDEE 231
           LLC+ P    I HRKI K         GWK  + ++  +   I+  +I  E
Sbjct: 266 LLCEQPNYLTILHRKIFK----PHPKSGWKIPQPNYLTILHRIIFQLIMAE 126


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.342    0.149    0.512 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,614,110
Number of Sequences: 63676
Number of extensions: 310260
Number of successful extensions: 2237
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2233
length of query: 335
length of database: 12,639,632
effective HSP length: 98
effective length of query: 237
effective length of database: 6,399,384
effective search space: 1516654008
effective search space used: 1516654008
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 59 (27.3 bits)