BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146819.10 - phase: 0
(328 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CO979892 378 e-105
TC211512 similar to UP|Q91W51 (Q91W51) WASP family 1, partial (4%) 57 1e-08
TC209377 similar to UP|Q9FLX9 (Q9FLX9) Notchless protein homolog... 50 1e-06
TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%) 47 1e-05
TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 47 2e-05
TC227892 similar to UP|Q94AB4 (Q94AB4) AT3g13340/MDC11_13, parti... 46 2e-05
TC229098 similar to PIR|T46032|T46032 WD-40 repeat regulatory pr... 45 4e-05
TC206061 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-... 45 4e-05
TC220623 similar to UP|Q94AB4 (Q94AB4) AT3g13340/MDC11_13, parti... 45 6e-05
TC206060 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-... 44 8e-05
BE661627 similar to GP|2443881|gb contains beta-transducin motif... 44 8e-05
TC220178 similar to UP|Q8LNY6 (Q8LNY6) G protein beta subunit, p... 44 1e-04
TC226875 similar to UP|Q94JT6 (Q94JT6) At1g78070/F28K19_28, part... 43 2e-04
BI787980 similar to SP|P25387|GBLP Guanine nucleotide-binding pr... 43 2e-04
BI892593 similar to GP|22476946|gb| G protein beta subunit {Pisu... 42 3e-04
TC208434 similar to PIR|T01391|T01391 WD-repeat protein T4I9.10 ... 42 4e-04
TC205059 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-... 42 5e-04
TC222379 homologue to UP|Q9HGV7 (Q9HGV7) Gbeta like protein, par... 42 5e-04
TC204561 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-... 42 5e-04
TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 41 6e-04
>CO979892
Length = 754
Score = 378 bits (970), Expect = e-105
Identities = 180/192 (93%), Positives = 188/192 (97%)
Frame = -1
Query: 137 DRVNLELVSKVGISPTCSVVQCSWHPKLNQIFASVGDKSQGGTHILYDPTISERGALVCV 196
DRVNLELVSKVGISPTCSVVQCSWHPKLNQIFA+ GDKSQGGTHILYDPT+SERGALVCV
Sbjct: 754 DRVNLELVSKVGISPTCSVVQCSWHPKLNQIFATTGDKSQGGTHILYDPTVSERGALVCV 575
Query: 197 ARAPRKKSVDDFVANPVIHNPHALPLFRDQPNRKRQREKVLKDPLKSHKPEMPMTGPGFG 256
ARAPRKKS+DDF A PVIHNPHALPLFRDQP+RKRQREKVLKDPLKSHKPE+PMTGPGFG
Sbjct: 574 ARAPRKKSIDDFEAKPVIHNPHALPLFRDQPSRKRQREKVLKDPLKSHKPELPMTGPGFG 395
Query: 257 GRVGTSQGSLLTQYLLKKGGMIKETWMDEDPREAILKYADVAAKEPKFIAPAYAETQPEP 316
GRVGTSQGSLLTQYLLKKGGMIKETWM+EDPREAILKYAD AAK+PKFIAPAYAETQPEP
Sbjct: 394 GRVGTSQGSLLTQYLLKKGGMIKETWMEEDPREAILKYADAAAKDPKFIAPAYAETQPEP 215
Query: 317 LFAKSDSEDEEK 328
+FAKSDSEDEEK
Sbjct: 214 VFAKSDSEDEEK 179
>TC211512 similar to UP|Q91W51 (Q91W51) WASP family 1, partial (4%)
Length = 801
Score = 57.0 bits (136), Expect = 1e-08
Identities = 24/27 (88%), Positives = 25/27 (91%)
Frame = +3
Query: 1 VIKPKLARPGRVPVTTCAWDYDGKCIA 27
VIKPKLARPG PVTTCAWD+DGKCIA
Sbjct: 720 VIKPKLARPGXXPVTTCAWDHDGKCIA 800
>TC209377 similar to UP|Q9FLX9 (Q9FLX9) Notchless protein homolog
(At5g52820), partial (33%)
Length = 669
Score = 50.1 bits (118), Expect = 1e-06
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +2
Query: 22 DGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSL 81
DG+ +A D S+++W+ G + + H + + +SAD R+LLS S D +L
Sbjct: 158 DGQWVASASFDKSVKLWNGTTG----KFVTAFRGHVGPVYQISWSADSRLLLSGSKDSTL 325
Query: 82 KVWDLRKTKEALKVFEELPNHYGQT-NVGFSPDEQLFFTG 120
KVWD+R K+ ++LP H + +V +SPD + +G
Sbjct: 326 KVWDIR----TRKLKQDLPGHADEVFSVDWSPDGEKVASG 433
Score = 38.1 bits (87), Expect = 0.005
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 13 PVTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRIL 72
PV +W D + + G D +++VW I+ +R H D++ S+ +S DG +
Sbjct: 257 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TRKLKQDLPGHADEVFSVDWSPDGEKV 424
Query: 73 LSRSFDDSLKVW 84
S D LK+W
Sbjct: 425 ASGGKDKVLKLW 460
Score = 34.7 bits (78), Expect = 0.061
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 56 HEDDITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQT-NVGFSPDE 114
H+ + + FS DG+ + S SFD S+K+W+ T + + F H G + +S D
Sbjct: 122 HQQLVNHVYFSPDGQWVASASFDKSVKLWN-GTTGKFVTAFR---GHVGPVYQISWSADS 289
Query: 115 QLFFTGTSVEKDST 128
+L +G+ KDST
Sbjct: 290 RLLLSGS---KDST 322
>TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%)
Length = 1048
Score = 47.0 bits (110), Expect = 1e-05
Identities = 25/85 (29%), Positives = 45/85 (52%)
Frame = +2
Query: 14 VTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILL 73
+ + A DG+ +A G DG+I +W + G P I C + SL FS++G ++
Sbjct: 374 ILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSC----VWSLAFSSEGSVIA 541
Query: 74 SRSFDDSLKVWDLRKTKEALKVFEE 98
S S D ++K+WD+ + + + E+
Sbjct: 542 SGSADCTVKLWDVNTSTKVSRAEEK 616
Score = 38.5 bits (88), Expect = 0.004
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 IKPKLARPGRVPVTTCA-WDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDI 60
I+P G + C W + IA G D ++++W ++ G R + H I
Sbjct: 209 IQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRVFVG----HRGMI 376
Query: 61 TSLKFSADGRILLSRSFDDSLKVWDL 86
SL S DGR + S D ++ +WDL
Sbjct: 377 LSLAMSPDGRYMASGDEDGTIMMWDL 454
>TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (57%)
Length = 1124
Score = 46.6 bits (109), Expect = 2e-05
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Frame = +1
Query: 14 VTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILL 73
++ AW D I D ++++W G G I + H+D + + F+ ++
Sbjct: 271 ISDLAWSSDSHYICSASDDRTLRIWDATVGGGC---IKILRGHDDAVFCVNFNPQSSYIV 441
Query: 74 SRSFDDSLKVWDLRKTKEALKVFEELPNH-YGQTNVGFSPDEQLFFT----GTSVEKDST 128
S SFD+++KVWD++ K + H T+V ++ D L + G+ D+
Sbjct: 442 SGSFDETIKVWDVKTG----KCVHTIKGHTMPVTSVHYNRDGNLIISASHDGSCKIWDTE 609
Query: 129 TGGLLCFFDRVNLELVSKVGISPTCSVV 156
TG LL VS SP ++
Sbjct: 610 TGNLLKTLIEDKAPAVSFAKFSPNGKLI 693
Score = 41.2 bits (95), Expect = 6e-04
Identities = 21/74 (28%), Positives = 42/74 (56%)
Frame = +1
Query: 12 VPVTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRI 71
+PVT+ ++ DG I DGS ++W + G + I + ++ KFS +G++
Sbjct: 520 MPVTSVHYNRDGNLIISASHDGSCKIWDTETGNLLKTLIEDKA---PAVSFAKFSPNGKL 690
Query: 72 LLSRSFDDSLKVWD 85
+L+ + +D+LK+W+
Sbjct: 691 ILAATLNDTLKLWN 732
Score = 37.7 bits (86), Expect = 0.007
Identities = 39/157 (24%), Positives = 65/157 (40%), Gaps = 7/157 (4%)
Frame = +1
Query: 7 ARPGRVPVTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKC--HEDDITSLK 64
A+P V V+ W +GG G G+ +P H + HE+ ++ +K
Sbjct: 7 AKPNHV*VSEFRWMATSTTSSGGGGTGTQTF---------KPYRHLKTLTDHENAVSCVK 159
Query: 65 FSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNH-YGQTNVGFSPDEQLFFTGTSV 123
FS DG +L S S D +L +W + L + L H G +++ +S D + +
Sbjct: 160 FSNDGTLLASASLDKTLIIW----SSATLTLCHRLVGHSEGISDLAWSSDSHYICSASDD 327
Query: 124 EK----DSTTGGLLCFFDRVNLELVSKVGISPTCSVV 156
D+T GG R + + V V +P S +
Sbjct: 328 RTLRIWDATVGGGCIKILRGHDDAVFCVNFNPQSSYI 438
>TC227892 similar to UP|Q94AB4 (Q94AB4) AT3g13340/MDC11_13, partial (68%)
Length = 1179
Score = 46.2 bits (108), Expect = 2e-05
Identities = 39/143 (27%), Positives = 64/143 (44%)
Frame = +3
Query: 18 AWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSF 77
AW DG+ A G D + +VW ++ + K + I S++F++DG+ +
Sbjct: 555 AWHPDGRIFATGNQDKTCRVWDVR---NLSKSVAVLKGNLGAIRSIRFTSDGQFMAMAEP 725
Query: 78 DDSLKVWDLRKTKEALKVFEELPNHYGQTNVGFSPDEQLFFTGTSVEKDSTTGGLLCFFD 137
D + V+D TK + +E+ + V FSPD + F G D T G LL F
Sbjct: 726 ADFVHVYD---TKHGFEKEQEIDFFGEISGVSFSPDTESLFIGV---WDRTYGSLLQFNR 887
Query: 138 RVNLELVSKVGISPTCSVVQCSW 160
R N + + I C++ C +
Sbjct: 888 RRNYMYLDCL*I---CNLTPCKY 947
>TC229098 similar to PIR|T46032|T46032 WD-40 repeat regulatory protein tup1
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (59%)
Length = 580
Score = 45.1 bits (105), Expect = 4e-05
Identities = 27/96 (28%), Positives = 47/96 (48%)
Frame = +3
Query: 26 IAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSLKVWD 85
I G D +++VW +K G + H D +T++ F+ DG +++S S+D ++WD
Sbjct: 99 IVSGSFDETVRVWDVKSG----KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 266
Query: 86 LRKTKEALKVFEELPNHYGQTNVGFSPDEQLFFTGT 121
T +K + N + V FSP+ + GT
Sbjct: 267 -ASTGHCMKTLIDDDNP-PVSFVKFSPNAKFILVGT 368
Score = 37.7 bits (86), Expect = 0.007
Identities = 30/116 (25%), Positives = 50/116 (42%), Gaps = 4/116 (3%)
Frame = +3
Query: 13 PVTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDD----ITSLKFSAD 68
PVT ++ DG I DG ++W G H K DD ++ +KFS +
Sbjct: 186 PVTAVDFNRDGSLIVSSSYDGLCRIWDASTG-------HCMKTLIDDDNPPVSFVKFSPN 344
Query: 69 GRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQTNVGFSPDEQLFFTGTSVE 124
+ +L + D++L++W+ T + LK + N + FS + G S E
Sbjct: 345 AKFILVGTLDNTLRLWNY-STGKFLKTYTGHVNSKYCISSTFSTTNGKYIVGGSEE 509
Score = 34.7 bits (78), Expect = 0.061
Identities = 22/67 (32%), Positives = 38/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 56 HEDDITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQ-TNVGFSPDE 114
H + + + F+ I++S SFD++++VWD+ K+ + LKV LP H T V F+ D
Sbjct: 51 HTNYVFCVNFNPQSNIIVSGSFDETVRVWDV-KSGKCLKV---LPAHSDPVTAVDFNRDG 218
Query: 115 QLFFTGT 121
L + +
Sbjct: 219 SLIVSSS 239
>TC206061 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-like,
partial (36%)
Length = 657
Score = 45.1 bits (105), Expect = 4e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Frame = +3
Query: 54 KCHEDDITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQ-TNVGFSP 112
+ H+D++ ++FS +G+ L S S D S +W++ E L V +L H ++V +SP
Sbjct: 201 EAHDDEVWYVQFSHNGKYLASASNDRSAIIWEVDMNGE-LSVKHKLSGHQKPVSSVSWSP 377
Query: 113 DEQLFFTGTSVEK-----DSTTGGLLCFFDRVNLELVSKVGISPTCSVVQCSWHPKLNQI 167
++Q T VE+ D +TG L +++ L+S C+W P I
Sbjct: 378 NDQELLT-CGVEEAVRRWDVSTGTCLQVYEKNGPGLIS------------CAWFPSGKYI 518
Query: 168 FASVGDKS 175
+ + DKS
Sbjct: 519 LSGLSDKS 542
Score = 29.3 bits (64), Expect = 2.5
Identities = 18/63 (28%), Positives = 28/63 (43%), Gaps = 4/63 (6%)
Frame = +3
Query: 16 TCAWDYDGKCIAGGIGDGSIQVWSIK----PGWGSRPDIHFEKCHEDDITSLKFSADGRI 71
+CAW GK I G+ D SI +W + W + + I+ L+ + DG
Sbjct: 486 SCAWFPSGKYILSGLSDKSICMWDLDGKEVESWKGQRTL--------KISDLEITGDGEH 641
Query: 72 LLS 74
+LS
Sbjct: 642 MLS 650
>TC220623 similar to UP|Q94AB4 (Q94AB4) AT3g13340/MDC11_13, partial (31%)
Length = 562
Score = 44.7 bits (104), Expect = 6e-05
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +3
Query: 18 AWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSF 77
AW DG+ A G D + +VW ++ + K + I S++F++DGR +
Sbjct: 60 AWHPDGRIFATGNQDKTCRVWDVR---NLSKSVTVLKGNLGAIRSIRFTSDGRFMAMAEP 230
Query: 78 DDSLKVWDLRKTKEALKVFEELPNHYGQ-TNVGFSPDEQLFFTGTSVEKDSTTGGLLCFF 136
D + V+D + E E+ + +G+ + V FSPD + F G D T G LL +
Sbjct: 231 ADFVHVYDAQSGFEK----EQEIDFFGEISGVSFSPDTESLFVGV---WDRTYGSLLQYN 389
Query: 137 DRVN 140
R N
Sbjct: 390 RRRN 401
>TC206060 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-like,
partial (62%)
Length = 1510
Score = 44.3 bits (103), Expect = 8e-05
Identities = 36/128 (28%), Positives = 59/128 (45%), Gaps = 6/128 (4%)
Frame = +3
Query: 54 KCHEDDITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQ-TNVGFSP 112
+ H+D++ ++FS +G+ L S S D + +W++ L V L H ++V +SP
Sbjct: 414 EAHDDEVWYVQFSHNGKYLASASKDQTAIIWEV-GINGRLSVKHRLSGHQKPVSSVSWSP 590
Query: 113 DEQLFFTGTSVEK-----DSTTGGLLCFFDRVNLELVSKVGISPTCSVVQCSWHPKLNQI 167
++Q T VE+ D +TG L +++ LVS CSW P I
Sbjct: 591 NDQELLT-CGVEEAIRRWDVSTGKCLQIYEKAGAGLVS------------CSWFPCGKYI 731
Query: 168 FASVGDKS 175
+ DKS
Sbjct: 732 LCGLSDKS 755
>BE661627 similar to GP|2443881|gb contains beta-transducin motif
{Arabidopsis thaliana}, partial (13%)
Length = 735
Score = 44.3 bits (103), Expect = 8e-05
Identities = 29/99 (29%), Positives = 45/99 (45%)
Frame = +2
Query: 22 DGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSL 81
DG+ + G D ++VW + G +H K HE I S+ F +L + S D ++
Sbjct: 11 DGRWVVSGGFDNVVKVWDLTAG----KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 178
Query: 82 KVWDLRKTKEALKVFEELPNHYGQTNVGFSPDEQLFFTG 120
K WDL + + P G ++ F PD + FTG
Sbjct: 179 KFWDLETFE---LIGSARPEATGVRSIAFHPDGRALFTG 286
Score = 38.5 bits (88), Expect = 0.004
Identities = 34/110 (30%), Positives = 51/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 65 FSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQ-TNVGFSPDEQLFFTGTSV 123
F+ DGR ++S FD+ +KVWDL A K+ + H G ++ F P E L TG++
Sbjct: 2 FTPDGRWVVSGGFDNVVKVWDL----TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSA- 166
Query: 124 EKDSTTGGLLCFFDRVNLELVSKVGISPTCSVVQCSWHPKLNQIFASVGD 173
D T + F+D EL+ T V ++HP +F D
Sbjct: 167 --DRT----VKFWDLETFELIGSARPEAT-GVRSIAFHPDGRALFTGHED 295
>TC220178 similar to UP|Q8LNY6 (Q8LNY6) G protein beta subunit, partial (35%)
Length = 744
Score = 43.5 bits (101), Expect = 1e-04
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +2
Query: 13 PVTTCAWDYDGKCIAGGIGDGSIQVWS-----IKPGWGSRPDIHFEKCHEDDITSLKFSA 67
PVT+ A+ G+ + G +G VW + GS D HED I+ L SA
Sbjct: 212 PVTSIAFSASGRLLFAGYTNGDCYVWDTLLAKVVLNIGSLQD-----SHEDRISCLGLSA 376
Query: 68 DGRILLSRSFDDSLKVW 84
DG L + S+D +LK+W
Sbjct: 377 DGSALCTGSWDTNLKIW 427
Score = 38.1 bits (87), Expect = 0.005
Identities = 26/97 (26%), Positives = 49/97 (49%), Gaps = 4/97 (4%)
Frame = +2
Query: 29 GIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDIT---SLKFSADGRILLSRSFDDSLKVWD 85
G DG+ +++ I+ G + +++++ ++DIT S+ FSA GR+L + + VWD
Sbjct: 119 GSDDGTCRLFDIRTG--HQLQVYYQQHSDNDITPVTSIAFSASGRLLFAGYTNGDCYVWD 292
Query: 86 LRKTKEALKVFEELPNHYGQTN-VGFSPDEQLFFTGT 121
K L + +H + + +G S D TG+
Sbjct: 293 TLLAKVVLNIGSLQDSHEDRISCLGLSADGSALCTGS 403
>TC226875 similar to UP|Q94JT6 (Q94JT6) At1g78070/F28K19_28, partial (84%)
Length = 1542
Score = 43.1 bits (100), Expect = 2e-04
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Frame = +1
Query: 18 AWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSF 77
AW DG+ +A G D + ++W I+ + K I +L+F++DGR L
Sbjct: 895 AWHPDGQILATGNQDKTCRLWDIR---NLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEP 1065
Query: 78 DDSLKVWDLRKTKE---ALKVFEELPNHYGQTNVGFSPDEQLFFTGTSVEKDSTTGGLLC 134
D + ++D E + +F E+ + FSPD + F G + D T G LL
Sbjct: 1066 ADFVHIFDSHSGYEQGQEIDLFGEI------AGISFSPDTEALFVGIA---DRTYGSLLE 1218
Query: 135 FFDRVNLELVSKVGISPTCSVVQCSWHPKLNQIFASVGDK 174
F + + + S VQ H ++Q +G K
Sbjct: 1219 FNRKRHYNYLDSF*WSGVPQDVQQLLHVHIHQRIPQIGLK 1338
Score = 28.9 bits (63), Expect = 3.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 54 KCHEDDITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFE 97
K H D S + DG+IL + + D + ++WD+R +++ V +
Sbjct: 865 KGHLDYSFSSAWHPDGQILATGNQDKTCRLWDIRNLSQSMAVLK 996
>BI787980 similar to SP|P25387|GBLP Guanine nucleotide-binding protein beta
subunit-like protein. {Chlamydomonas reinhardtii},
partial (33%)
Length = 421
Score = 42.7 bits (99), Expect = 2e-04
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +3
Query: 22 DGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSL 81
DG+ G DG++++W + G +R + H D+ S+ FSAD R ++S S D ++
Sbjct: 234 DGQFALSGSWDGTLRLWDLNTGITTRRFVG----HTKDVLSVAFSADNRQIVSGSRDKTV 401
Query: 82 KVWD 85
K+W+
Sbjct: 402 KLWN 413
Score = 30.4 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 20/31 (63%)
Frame = +3
Query: 56 HEDDITSLKFSADGRILLSRSFDDSLKVWDL 86
H + + S+DG+ LS S+D +L++WDL
Sbjct: 198 HSHYVEDVVISSDGQFALSGSWDGTLRLWDL 290
>BI892593 similar to GP|22476946|gb| G protein beta subunit {Pisum sativum},
partial (24%)
Length = 361
Score = 42.4 bits (98), Expect = 3e-04
Identities = 27/77 (35%), Positives = 37/77 (47%), Gaps = 5/77 (6%)
Frame = +3
Query: 13 PVTTCAWDYDGKCIAGGIGDGSIQVWS-----IKPGWGSRPDIHFEKCHEDDITSLKFSA 67
PVT+ A+ G+ + G +G VW + GS D HED I L SA
Sbjct: 48 PVTSIAFSASGRLLFAGYTNGDCYVWDTLLAKVVLNIGSLQD-----SHEDRIIFLGLSA 212
Query: 68 DGRILLSRSFDDSLKVW 84
DG L + S+D +LK+W
Sbjct: 213 DGSALCTGSWDTNLKIW 263
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (45%), Gaps = 1/63 (1%)
Frame = +3
Query: 60 ITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQ-TNVGFSPDEQLFF 118
+TS+ FSA GR+L + + VWD K L + +H + +G S D
Sbjct: 51 VTSIAFSASGRLLFAGYTNGDCYVWDTLLAKVVLNIGSLQDSHEDRIIFLGLSADGSALC 230
Query: 119 TGT 121
TG+
Sbjct: 231 TGS 239
>TC208434 similar to PIR|T01391|T01391 WD-repeat protein T4I9.10 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(68%)
Length = 1364
Score = 42.0 bits (97), Expect = 4e-04
Identities = 24/74 (32%), Positives = 32/74 (42%)
Frame = +1
Query: 15 TTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLS 74
T C D G I G D I+VW + H + IT + DGR L+S
Sbjct: 541 TVCFADESGHLIYSGSDDSFIKVWDRRCFVAKGQPAGILMGHLEGITFIDSRGDGRYLIS 720
Query: 75 RSFDDSLKVWDLRK 88
D + K+WD+RK
Sbjct: 721 NGKDQTTKLWDIRK 762
Score = 35.4 bits (80), Expect = 0.035
Identities = 26/77 (33%), Positives = 41/77 (52%), Gaps = 5/77 (6%)
Frame = +1
Query: 50 IHFEKCHEDD---ITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQT 106
++F + DD I S+KFS DGR L++ + D S+ V+DL K +L++ P H
Sbjct: 370 LNFSSDNGDDEFGIFSVKFSTDGRELVAGTSDCSICVYDLGADKLSLRI----PAHQSDV 537
Query: 107 NVGFSPDE--QLFFTGT 121
N DE L ++G+
Sbjct: 538 NTVCFADESGHLIYSGS 588
>TC205059 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1492
Score = 41.6 bits (96), Expect = 5e-04
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 22 DGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSL 81
DG+ G DG +++W + G +R + H D+ S+ FS D R ++S S D ++
Sbjct: 440 DGQFALSGSWDGELRLWDLAAGTSARRFVG----HTKDVLSVAFSIDNRQIVSASRDRTI 607
Query: 82 KVWD 85
K+W+
Sbjct: 608 KLWN 619
Score = 30.4 bits (67), Expect = 1.1
Identities = 31/115 (26%), Positives = 45/115 (38%), Gaps = 10/115 (8%)
Frame = +2
Query: 56 HEDDITSLKFSADGRILLSRSFDDSLKVWDLR----------KTKEALKVFEELPNHYGQ 105
H + + S+DG+ LS S+D L++WDL TK+ L V + N +
Sbjct: 404 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDN---R 574
Query: 106 TNVGFSPDEQLFFTGTSVEKDSTTGGLLCFFDRVNLELVSKVGISPTCSVVQCSW 160
V S D + T E T D V+ S + PT +V SW
Sbjct: 575 QIVSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPT--IVSASW 733
>TC222379 homologue to UP|Q9HGV7 (Q9HGV7) Gbeta like protein, partial (84%)
Length = 950
Score = 41.6 bits (96), Expect = 5e-04
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +1
Query: 14 VTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILL 73
V+ C DG D ++++W + G +R + H +D+ S+ FSAD R ++
Sbjct: 43 VSDCVISSDGAYALSSSWDKTLRLWELSTGQTTRRFVG----HNNDVLSVSFSADNRQIV 210
Query: 74 SRSFDDSLKVWD 85
S S D ++K+W+
Sbjct: 211 SGSRDRTIKLWN 246
Score = 32.0 bits (71), Expect = 0.39
Identities = 29/112 (25%), Positives = 53/112 (46%), Gaps = 7/112 (6%)
Frame = +1
Query: 56 HEDDITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQTNVGFSPDEQ 115
H ++ S+DG LS S+D +L++W+L T + + F + ++ +V FS D +
Sbjct: 31 HSHIVSDCVISSDGAYALSSSWDKTLRLWEL-STGQTTRRF--VGHNNDVLSVSFSADNR 201
Query: 116 LFFTGT---SVEKDSTTGGL-LCFFDRVNLELVSKVGISPTCS---VVQCSW 160
+G+ +++ +T G D+ + E VS V SP +V W
Sbjct: 202 QIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGW 357
Score = 27.3 bits (59), Expect = 9.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 53 EKCHEDDITSLKFSADGRILLSRSFDDSLKVW 84
+K E + SL +SADG+ L + D+ ++ W
Sbjct: 682 KKAREPECISLAWSADGQTLFAGYTDNKIRAW 777
>TC204561 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1419
Score = 41.6 bits (96), Expect = 5e-04
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +1
Query: 22 DGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSL 81
DG+ G DG +++W + G +R + H D+ S+ FS D R ++S S D ++
Sbjct: 364 DGQFALSGSWDGELRLWDLAAGTSARRFVG----HTKDVLSVAFSIDNRQIVSASRDRTI 531
Query: 82 KVWD 85
K+W+
Sbjct: 532 KLWN 543
Score = 30.4 bits (67), Expect = 1.1
Identities = 31/115 (26%), Positives = 45/115 (38%), Gaps = 10/115 (8%)
Frame = +1
Query: 56 HEDDITSLKFSADGRILLSRSFDDSLKVWDLR----------KTKEALKVFEELPNHYGQ 105
H + + S+DG+ LS S+D L++WDL TK+ L V + N +
Sbjct: 328 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDN---R 498
Query: 106 TNVGFSPDEQLFFTGTSVEKDSTTGGLLCFFDRVNLELVSKVGISPTCSVVQCSW 160
V S D + T E T D V+ S + PT +V SW
Sbjct: 499 QIVSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPT--IVSASW 657
>TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1062
Score = 41.2 bits (95), Expect = 6e-04
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Frame = +2
Query: 14 VTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGR--- 70
V WD G +A D + ++WS+K +H + H +I ++++S G
Sbjct: 293 VNCIKWDPTGSLLASCSDDMTAKIWSMKQD----KYLHEFREHSKEIYTIRWSPTGPGTN 460
Query: 71 ------ILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQT-NVGFSPDEQLFFTGT 121
+L S SFD ++K+WD+ E K+ L H + +V FSP+ + +G+
Sbjct: 461 NPNKNLVLASASFDSTVKLWDV----ELGKLLYSLNGHRDRVYSVAFSPNGEYIASGS 622
Score = 33.1 bits (74), Expect = 0.18
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +2
Query: 26 IAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSLKVWD 85
+A D ++++W ++ G ++ H D + S+ FS +G + S S D S+ +W
Sbjct: 482 LASASFDSTVKLWDVELG----KLLYSLNGHRDRVYSVAFSPNGEYIASGSPDRSMLIWS 649
Query: 86 LRKTK 90
L++ K
Sbjct: 650 LKEGK 664
Score = 28.1 bits (61), Expect = 5.7
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 56 HEDDITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFE 97
H+ I SLK++ G +L+ S D + VWD+ K +E + FE
Sbjct: 32 HKGPIFSLKWNKKGDYILTGSCDQTAIVWDV-KAEEWKQQFE 154
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.137 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,233,270
Number of Sequences: 63676
Number of extensions: 225628
Number of successful extensions: 1227
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of query: 328
length of database: 12,639,632
effective HSP length: 98
effective length of query: 230
effective length of database: 6,399,384
effective search space: 1471858320
effective search space used: 1471858320
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146819.10