BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146807.6 + phase: 0
(374 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC218360 353 7e-98
TC223210 weakly similar to UP|Q7EZ44 (Q7EZ44) Receptor-like kina... 271 5e-73
TC219328 similar to UP|Q7EZ44 (Q7EZ44) Receptor-like kinase Xa21... 269 2e-72
TC220758 266 9e-72
AW099944 120 1e-27
TC225698 similar to UP|Q8LLW2 (Q8LLW2) Receptor-like kinase Xa21... 110 1e-24
TC225694 similar to UP|Q8LLW2 (Q8LLW2) Receptor-like kinase Xa21... 103 1e-22
BG359474 90 1e-18
BG352457 81 7e-16
TC225695 similar to UP|Q8LLW2 (Q8LLW2) Receptor-like kinase Xa21... 54 9e-08
TC225697 similar to UP|Q8LLW2 (Q8LLW2) Receptor-like kinase Xa21... 52 3e-07
TC225869 similar to UP|Q84P56 (Q84P56) TGB12K interacting protei... 50 2e-06
TC231177 similar to UP|Q9SF90 (Q9SF90) F8A24.6 protein, partial ... 49 4e-06
TC208478 weakly similar to UP|Q7X6P5 (Q7X6P5) Ankyrin, partial (... 43 2e-04
TC219018 weakly similar to UP|ZDH3_MOUSE (Q8R173) Zinc finger DH... 42 3e-04
TC207362 similar to UP|Q9FIT8 (Q9FIT8) GCN4-complementing protei... 42 4e-04
TC211079 weakly similar to UP|Q9NHC7 (Q9NHC7) Integrin-linked ki... 42 4e-04
TC232212 similar to UP|Q84LA0 (Q84LA0) Shaker-like potassium cha... 40 0.002
TC210454 weakly similar to GB|AAP68217.1|31711722|BT008778 At3g0... 38 0.008
TC230807 similar to GB|AAO63323.1|28950799|BT005259 At2g03430 {A... 37 0.011
>TC218360
Length = 1092
Score = 353 bits (906), Expect = 7e-98
Identities = 162/206 (78%), Positives = 180/206 (86%)
Frame = +2
Query: 169 SPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCALYLCSTANVSSEMHGPPGSVPCPL 228
S T SS+EIDFCAVCLERPC+VAAEGC HELCVRCALYLCST NVSSEM GPPGS+PCPL
Sbjct: 2 SSTASSDEIDFCAVCLERPCSVAAEGCGHELCVRCALYLCSTNNVSSEMVGPPGSIPCPL 181
Query: 229 CRHGIISFVKLPSFQPKENKLHASLSMCTPCIQHPRDIDQSSFSHNTSEIRKNRVASVSS 288
CRHG++SFVKLP Q KENKLH SL +CTPC+ HPRD+D+ S SH T E+ +NRVASV S
Sbjct: 182 CRHGVVSFVKLPGSQAKENKLHVSLGLCTPCMLHPRDLDKPSLSH-TPEVGRNRVASVPS 358
Query: 289 EMLCPVTCTPFPSVAIPLCTCNDGPCPPFEPGEDETQDESPRHSQASTTDQDKMEGPKLV 348
E+LCPVTC+PFPS+AIPLCTCNDGPCP FEP E ETQD P HSQAST DQDK+EGP+L
Sbjct: 359 EILCPVTCSPFPSMAIPLCTCNDGPCPSFEPREVETQDGLPHHSQASTVDQDKIEGPRLD 538
Query: 349 KKTCSNMFWGRRSCSRENQCNSEINA 374
K TCS+MFWGRRSCSRE+QCNSEINA
Sbjct: 539 KTTCSSMFWGRRSCSREHQCNSEINA 616
>TC223210 weakly similar to UP|Q7EZ44 (Q7EZ44) Receptor-like kinase
Xa21-binding protein 3-like, partial (17%)
Length = 459
Score = 271 bits (692), Expect = 5e-73
Identities = 124/147 (84%), Positives = 135/147 (91%)
Frame = +3
Query: 93 GNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSFPTSNYLL 152
GNLKCCQILL++GA+RMALNCNGWLPLDVARMWGRHWLEPLL P+SD +SSFP+SNYL
Sbjct: 6 GNLKCCQILLARGASRMALNCNGWLPLDVARMWGRHWLEPLLTPTSDATISSFPSSNYLS 185
Query: 153 LPLMSVLNIAREYGLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCALYLCSTAN 212
LPLMSVLNIARE GL S TTSSNE+D CAVCLER C+VAAEGC HELCVRCALYLCST+N
Sbjct: 186 LPLMSVLNIARECGLQSTTTSSNEVDACAVCLERQCSVAAEGCGHELCVRCALYLCSTSN 365
Query: 213 VSSEMHGPPGSVPCPLCRHGIISFVKL 239
VSSE GPPGS+PCPLCRHGI+SFVKL
Sbjct: 366 VSSETGGPPGSIPCPLCRHGIVSFVKL 446
>TC219328 similar to UP|Q7EZ44 (Q7EZ44) Receptor-like kinase Xa21-binding
protein 3-like, partial (51%)
Length = 1424
Score = 269 bits (687), Expect = 2e-72
Identities = 141/288 (48%), Positives = 182/288 (62%), Gaps = 4/288 (1%)
Frame = +3
Query: 26 SELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTP 85
S L + +N+TAD GITALHMAALNG+ + VQLLLDL A+ S T GT++DLIG+GSTP
Sbjct: 243 SGLCEVINRTADGGITALHMAALNGHAESVQLLLDLGASVSEVTVEDGTTIDLIGSGSTP 422
Query: 86 LHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSF 145
LHYAACGGN +CCQ+L++KGA A N NGW PL VAR W R WLE +L + +
Sbjct: 423 LHYAACGGNQQCCQLLIAKGANLTAENANGWTPLMVARSWHRDWLEDILKTPPEDPLQVL 602
Query: 146 PTSNYLLLPLMSVLNIAREYGLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCAL 205
P S Y+ LPLMS++ IARE G + + +D CAVCLER CTVA EGC HE C +CA+
Sbjct: 603 P-SPYISLPLMSIVRIARECGWRTNDLAPC-LDPCAVCLERKCTVAVEGCDHEFCTQCAM 776
Query: 206 YLCSTANVSSEMHGPPGSVPCPLCRHGIISFVKLPSFQPKENKL----HASLSMCTPCIQ 261
YLCST + S+ GPPGS+ CPLCRHGI+SFVKLP +P ++ + SL++CT +
Sbjct: 777 YLCSTNSTSTTTTGPPGSIACPLCRHGIVSFVKLPDARPLHKEMQRTSNLSLTLCTCSSE 956
Query: 262 HPRDIDQSSFSHNTSEIRKNRVASVSSEMLCPVTCTPFPSVAIPLCTC 309
D + + +S S ++C FPS + C
Sbjct: 957 VLGDSSDMTTPFCKPTSSRGSKSSSPSRSFRSMSCQGFPSFRMNPSLC 1100
Score = 37.7 bits (86), Expect = 0.008
Identities = 22/63 (34%), Positives = 33/63 (51%)
Frame = +3
Query: 41 TALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQI 100
TAL A +G+++ VQ L+ NAN A Y G T LH AA G+ +C ++
Sbjct: 3 TALMQACQHGHWEVVQTLIIFNANIHKADYL---------NGGTVLHLAALNGHTRCIRL 155
Query: 101 LLS 103
+L+
Sbjct: 156 ILA 164
>TC220758
Length = 948
Score = 266 bits (681), Expect = 9e-72
Identities = 125/162 (77%), Positives = 136/162 (83%)
Frame = +1
Query: 213 VSSEMHGPPGSVPCPLCRHGIISFVKLPSFQPKENKLHASLSMCTPCIQHPRDIDQSSFS 272
VSSE GPPGS+PCPLCRHGIISFVKLP Q KENKLH SLS+CTPC+ HP D+D+ + S
Sbjct: 1 VSSETCGPPGSIPCPLCRHGIISFVKLPGSQAKENKLHVSLSLCTPCMLHPCDLDRPTVS 180
Query: 273 HNTSEIRKNRVASVSSEMLCPVTCTPFPSVAIPLCTCNDGPCPPFEPGEDETQDESPRHS 332
H T EIR+NRVASV SEMLCPVTCTPFPSVAIPLCTCN+GPCP FEP E E Q SP HS
Sbjct: 181 H-TPEIRRNRVASVPSEMLCPVTCTPFPSVAIPLCTCNNGPCPSFEPREAEAQGGSPLHS 357
Query: 333 QASTTDQDKMEGPKLVKKTCSNMFWGRRSCSRENQCNSEINA 374
AS DQDKM+GP+L K TCS MFWGRRSCSRE+QCNSEINA
Sbjct: 358 HASMMDQDKMDGPRLEKTTCSGMFWGRRSCSREHQCNSEINA 483
>AW099944
Length = 434
Score = 120 bits (301), Expect = 1e-27
Identities = 57/62 (91%), Positives = 60/62 (95%)
Frame = +2
Query: 24 RCSELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGS 83
+CS LSKF+NKTADAGITALHMAALNGYFDCVQLLLDL+AN SAATYHYGTSMDLIGAGS
Sbjct: 248 KCSALSKFINKTADAGITALHMAALNGYFDCVQLLLDLSANVSAATYHYGTSMDLIGAGS 427
Query: 84 TP 85
TP
Sbjct: 428 TP 433
Score = 34.7 bits (78), Expect = 0.072
Identities = 28/93 (30%), Positives = 40/93 (42%), Gaps = 24/93 (25%)
Frame = +2
Query: 38 AGITALHMAALNGYFDCVQLLL-DLNANASAATYH-----YGTSMDL------------- 78
+G TALH AA+NG+ C++L++ D +A H G + ++
Sbjct: 89 SGRTALHFAAINGHARCIRLVVADFVPSAPFEALHAHMVAEGDASNVENQI*TKCSALSK 268
Query: 79 -----IGAGSTPLHYAACGGNLKCCQILLSKGA 106
AG T LH AA G C Q+LL A
Sbjct: 269 FINKTADAGITALHMAALNGYFDCVQLLLDLSA 367
>TC225698 similar to UP|Q8LLW2 (Q8LLW2) Receptor-like kinase Xa21-binding
protein 3, partial (51%)
Length = 865
Score = 110 bits (275), Expect = 1e-24
Identities = 86/267 (32%), Positives = 122/267 (45%), Gaps = 30/267 (11%)
Frame = +3
Query: 1 MLTIKYCFNNLCILYSCYSFTSCRCSELSKFVNKTADAGITALHMAALNGYFDCVQLLLD 60
+ +Y F C+L +S C S+FVN G T LH+AA +CV +LLD
Sbjct: 30 LFLFQY*FRCCCVL-GFFSVF*IDCRGFSRFVNIRDGKGATPLHLAARQRRSECVHILLD 206
Query: 61 LNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWLPLD 120
A A+T YG GSTPLH AA GG++ C + LL+ GA R+ + +G +P
Sbjct: 207 SGALVCASTGGYGCP------GSTPLHLAARGGSIDCIRELLAWGADRLQRDASGRIPYM 368
Query: 121 VARMWGRHWL----------EPLLAPSSDTIVSSF-PTSNYLLLPLMSVLNIARE----- 164
VA + +H EPL+ PS +S P + LL + N RE
Sbjct: 369 VA-LKHKHGACASLLNPTSAEPLVWPSPLKFISELNPEAKALLEQALMDANREREKNILK 545
Query: 165 ---YGLHSPTTSS---------NEIDFCAVCLERPCTVAAEGCMHELCVRCALYLC--ST 210
Y L SP+ S +E + C +C E+ CT+ + C H++C +C L LC +
Sbjct: 546 GSSYSLPSPSHSDGVADNMSEVSESELCCICFEQVCTIEVQNCGHQMCAQCTLALCCHNK 725
Query: 211 ANVSSEMHGPPGSVPCPLCRHGIISFV 237
N ++ PP CP CR I V
Sbjct: 726 PNPATACLTPP---VCPFCRSTITRLV 797
>TC225694 similar to UP|Q8LLW2 (Q8LLW2) Receptor-like kinase Xa21-binding
protein 3, partial (75%)
Length = 1759
Score = 103 bits (257), Expect = 1e-22
Identities = 84/278 (30%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Frame = +3
Query: 29 SKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHY 88
++FVN G T LH+AA + +C+ LLD A A+T YG GSTPLH
Sbjct: 552 ARFVNIRDGNGATPLHLAARHRRPECLHALLDNGALVCASTGGYGYP------GSTPLHM 713
Query: 89 AACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDT-------- 140
AA GG+L C ++LL+ GA R+ L+ +G +P VA LL PSS
Sbjct: 714 AARGGSLDCVRMLLAWGADRLQLDSSGKIPFSVALKHKHKACAALLDPSSAAPLVWPSPL 893
Query: 141 --IVSSFPTSNYLLLPLMSVLNIAREYGL-------HSPTTSSNE----------IDFCA 181
I + LL + N RE + SP S +E ++ C
Sbjct: 894 KFISELNQEAKALLEKALQEANREREKTILKETDMPPSPLNSESEDDNIASEASDMELCC 1073
Query: 182 VCLERPCTVAAEGCMHELCVRCALYLCSTANVSSEMHGPPGSVPCPLCRHGIISFVKLPS 241
+C ++ CT+ C H++C C L LC + G G V CP CR I+ +
Sbjct: 1074ICFDQACTIEVRPCGHQMCAHCTLALCCHKKLDPATTGLSGPV-CPFCRGSILQLL---- 1238
Query: 242 FQPKENKLHASLSMCTPCIQHPRDIDQSSFSHNTSEIR 279
K NK+ + +P PR +S+FS +S +
Sbjct: 1239-VAKINKISDTEVESSP--MKPRRSRKSNFSEGSSSFK 1343
Score = 38.9 bits (89), Expect = 0.004
Identities = 27/88 (30%), Positives = 40/88 (44%), Gaps = 24/88 (27%)
Frame = +3
Query: 40 ITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSM-------------DLIGAGS--- 83
++ LH+AA NG + + +LLD + N H T + LI AG+
Sbjct: 249 LSPLHVAAANGRIEVLSMLLDRSFNVDVLNRHKQTPLMLAVMHGKTGCVEKLIHAGASIL 428
Query: 84 --------TPLHYAACGGNLKCCQILLS 103
T LHYAA GN+ C +++LS
Sbjct: 429 MFDSIRRRTCLHYAAYYGNIDCLKVILS 512
>BG359474
Length = 402
Score = 90.1 bits (222), Expect = 1e-18
Identities = 40/52 (76%), Positives = 45/52 (85%)
Frame = +3
Query: 323 ETQDESPRHSQASTTDQDKMEGPKLVKKTCSNMFWGRRSCSRENQCNSEINA 374
E QD SPRHSQA+ DQ+KM+GP+L K TCS MFWGRRSCSRE+QCNSEINA
Sbjct: 3 EAQDGSPRHSQAAMMDQNKMDGPRLEKMTCSGMFWGRRSCSREHQCNSEINA 158
>BG352457
Length = 447
Score = 81.3 bits (199), Expect = 7e-16
Identities = 47/87 (54%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Frame = +3
Query: 219 GPPGSVPCPLCRHGIISFVKLPSFQPKENKLHASLSMC-TPCI-QHPRDIDQSSFSHNTS 276
GPPGS+PCPLCRHG++SFVKLP Q KENKLH C PC+ HPRD+ S
Sbjct: 3 GPPGSIPCPLCRHGVVSFVKLPGSQAKENKLHVVSWXCVXPCMXXHPRDLXTSHPFLIXP 182
Query: 277 EIRKNRVASVSS--EMLCPVTC-TPFP 300
E K V S E+LCPVT PFP
Sbjct: 183 EGWKKIV*XSGSFGEILCPVTLXXPFP 263
>TC225695 similar to UP|Q8LLW2 (Q8LLW2) Receptor-like kinase Xa21-binding
protein 3, partial (26%)
Length = 968
Score = 54.3 bits (129), Expect = 9e-08
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Frame = +3
Query: 166 GLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCALYLC--STANVSSEMHGPPGS 223
G+ T+ +E + C +C E+ CT+ + C H++C +C L LC + N ++ PP
Sbjct: 120 GVADNTSEVSESELCCICFEQVCTIEVQNCGHQMCAQCTLALCCHNKPNPATACLTPP-- 293
Query: 224 VPCPLCRHGIISFVKLPSFQPKENKLH------ASLSMCTPCIQHPRDIDQSSFSHNTSE 277
CP CR I V + + E + LS + +++ DI SSF +S
Sbjct: 294 -VCPFCRSTITRLVVVKTECHDETDQDSVDINCSKLSKSSRKLRNLNDIGSSSFKGLSSV 470
Query: 278 IRKNRVASVSS 288
++ S SS
Sbjct: 471 SSFGKLGSRSS 503
>TC225697 similar to UP|Q8LLW2 (Q8LLW2) Receptor-like kinase Xa21-binding
protein 3, partial (33%)
Length = 1248
Score = 52.4 bits (124), Expect = 3e-07
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Frame = +2
Query: 167 LHSPTTSSN------EIDFCAVCLERPCTVAAEGCMHELCVRCALYLCSTANVSSEMHGP 220
LHS + N +++ C +C ++ CT+ C H++C C L LC G
Sbjct: 566 LHSESEDDNIASEASDMELCCICFDQACTIEVRPCGHQMCAHCTLALCCHKKPDPATAGL 745
Query: 221 PGSVPCPLCRHGIISFVKLPSFQPKENKLHASLSMCTPCIQHPRDIDQSSFSHNTSEIR 279
G V CP CR I+ + K NK+ + P PR +S+FS +S +
Sbjct: 746 SGPV-CPFCRGTILQLL-----VAKINKISDTEVESGP--MKPRRSRKSNFSEGSSSFK 898
>TC225869 similar to UP|Q84P56 (Q84P56) TGB12K interacting protein 2, partial
(78%)
Length = 1445
Score = 49.7 bits (117), Expect = 2e-06
Identities = 31/86 (36%), Positives = 41/86 (47%)
Frame = +2
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G TALH A G C Q+LL+ A A + T+ LHYAA G +C
Sbjct: 899 GRTALHFACGYGEVKCAQVLLEAGAKVDALDKNKNTA----------LHYAAGYGRKECV 1048
Query: 99 QILLSKGATRMALNCNGWLPLDVARM 124
+LL GA N +G P+DVA++
Sbjct: 1049ALLLENGAAVTLQNMDGKTPIDVAKL 1126
Score = 35.4 bits (80), Expect = 0.042
Identities = 20/46 (43%), Positives = 25/46 (53%)
Frame = +2
Query: 82 GSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGR 127
G T LH+A G +KC Q+LL GA AL+ N L A +GR
Sbjct: 899 GRTALHFACGYGEVKCAQVLLEAGAKVDALDKNKNTALHYAAGYGR 1036
>TC231177 similar to UP|Q9SF90 (Q9SF90) F8A24.6 protein, partial (78%)
Length = 938
Score = 48.9 bits (115), Expect = 4e-06
Identities = 34/124 (27%), Positives = 55/124 (43%), Gaps = 30/124 (24%)
Frame = +2
Query: 28 LSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAA------------------- 68
L+ +++ + G TALH+ L G+ CVQLL++ AN A
Sbjct: 245 LTGSIDEPVEDGDTALHLTCLYGHLACVQLLIERGANIEAKDEEGAIPLHDACAGGFTEI 424
Query: 69 ----------TYHYGTSMDLIGA-GSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWL 117
H ++ + + G TPLH+AA G +++ ++LLS GA+ N G
Sbjct: 425 VQLLLNRANDAEHIKRMLESVDSEGDTPLHHAARGEHIEVIRLLLSNGASPTKANLYGKA 604
Query: 118 PLDV 121
P D+
Sbjct: 605 PADL 616
Score = 32.0 bits (71), Expect = 0.46
Identities = 22/71 (30%), Positives = 32/71 (44%), Gaps = 9/71 (12%)
Frame = +2
Query: 58 LLDLNANASAATYHY---------GTSMDLIGAGSTPLHYAACGGNLKCCQILLSKGATR 108
L DL+A A H G+ + + G T LH G+L C Q+L+ +GA
Sbjct: 179 LRDLSAAAQIGDAHALRIALDNLTGSIDEPVEDGDTALHLTCLYGHLACVQLLIERGANI 358
Query: 109 MALNCNGWLPL 119
A + G +PL
Sbjct: 359 EAKDEEGAIPL 391
>TC208478 weakly similar to UP|Q7X6P5 (Q7X6P5) Ankyrin, partial (51%)
Length = 980
Score = 43.1 bits (100), Expect = 2e-04
Identities = 29/91 (31%), Positives = 42/91 (45%)
Frame = +1
Query: 32 VNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAAC 91
V +A + A+H A+ G+ + V+ LL A+ A T G T LHYA
Sbjct: 277 VGASAMDDMAAIHFASQKGHLEVVRALLSAGASLKATTRK----------GMTSLHYAVQ 426
Query: 92 GGNLKCCQILLSKGATRMALNCNGWLPLDVA 122
G +++ + L KGA A G PLD+A
Sbjct: 427 GSHMELVKYLAKKGANLGAKTKAGKTPLDLA 519
>TC219018 weakly similar to UP|ZDH3_MOUSE (Q8R173) Zinc finger DHHC domain
containing protein 3 (Golgi-specific DHHC zinc finger
protein), partial (12%)
Length = 1730
Score = 42.4 bits (98), Expect = 3e-04
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +2
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G + LH AA G+ D V+LLL +A+ G TPLH+AA GN + C
Sbjct: 518 GRSPLHWAAYKGFADTVRLLLFRDASQGRQDKD----------GCTPLHWAALRGNAEAC 667
Query: 99 QILLSKGATR--MALNCNGWLPLDVARMWGRHWLEPLLA 135
+L+ G M + G P+ +A G + P L+
Sbjct: 668 AVLVHAGTKEELMVKDNAGNTPVQLAYDKGHRHVAPFLS 784
Score = 37.7 bits (86), Expect = 0.008
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +2
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G AL A+LN + D L+ A+ +A T LH+AA G+
Sbjct: 218 GYYALQWASLNNFHDIAHYLIQHGADVNAKD----------NMQQTALHWAAVHGSTLAA 367
Query: 99 QILLSKGATRMALNCNGWLPLDVARMWGR 127
+L+ GA A + NG+ + VA +G+
Sbjct: 368 DVLVENGARVEAADVNGYRAVHVAAQFGQ 454
>TC207362 similar to UP|Q9FIT8 (Q9FIT8) GCN4-complementing protein homolog,
partial (51%)
Length = 1959
Score = 42.0 bits (97), Expect = 4e-04
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +1
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G T LH+A V+LLL AN +A+ G TPLH G
Sbjct: 1447 GCTLLHLACETADIGMVELLLQYGANVNASD----------SRGQTPLHRCILKGRSTFA 1596
Query: 99 QILLSKGATRMALNCNGWLPLDVA 122
++LLS+GA A++ G P+++A
Sbjct: 1597 RLLLSRGADPRAVDEQGRTPIELA 1668
>TC211079 weakly similar to UP|Q9NHC7 (Q9NHC7) Integrin-linked kinase,
partial (8%)
Length = 453
Score = 42.0 bits (97), Expect = 4e-04
Identities = 24/76 (31%), Positives = 38/76 (49%)
Frame = +1
Query: 37 DAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLK 96
+ G TALHMAA NG+ D V+ L+ + ++ +TPLH+A G+++
Sbjct: 253 EQGRTALHMAAANGHIDIVEYLISRGVDLNSPNEE----------KNTPLHWACLNGHVE 402
Query: 97 CCQILLSKGATRMALN 112
+ L+ GA LN
Sbjct: 403 AVKKLIMAGANVSVLN 450
>TC232212 similar to UP|Q84LA0 (Q84LA0) Shaker-like potassium channel,
partial (25%)
Length = 814
Score = 39.7 bits (91), Expect = 0.002
Identities = 35/117 (29%), Positives = 51/117 (42%)
Frame = +2
Query: 34 KTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGG 93
K +AG + L A G D ++ LL + + Y Y +PLH AA G
Sbjct: 68 KIENAG-SFLCTAVARGDSDYLKRLLSNGMDPNLKDYDY----------RSPLHVAAAEG 214
Query: 94 NLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSFPTSNY 150
++LL GA+ + G PLD ARM G L LL + + +S FP+ +
Sbjct: 215 LYFMAKLLLEAGASVFTRDRWGNTPLDEARMCGNKNLIKLLEDAKSSQLSEFPSQEF 385
>TC210454 weakly similar to GB|AAP68217.1|31711722|BT008778 At3g05250
{Arabidopsis thaliana;} , partial (25%)
Length = 449
Score = 37.7 bits (86), Expect = 0.008
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 180 CAVCLERPCTVA-AEGCMHELCVRCALYLCSTANVSSEMHGPPGSVPCPLCR 230
C +CL ++ + C H+ C C L T V+S+ PP SV CPLC+
Sbjct: 70 CPICLGSFLQLSYLDKCFHKFCFNCILRW--TKVVASKHRSPPSSVKCPLCK 219
>TC230807 similar to GB|AAO63323.1|28950799|BT005259 At2g03430 {Arabidopsis
thaliana;} , partial (93%)
Length = 992
Score = 37.4 bits (85), Expect = 0.011
Identities = 32/108 (29%), Positives = 49/108 (44%)
Frame = +1
Query: 19 SFTSCRCSELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDL 78
+F + LSK ++ + + LH+AA +G+ V++LL +A+ G
Sbjct: 133 TFEAHSSETLSKALSLRNEDARSLLHVAASSGHSQVVKMLLSCDASV-------GVVNCA 291
Query: 79 IGAGSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWG 126
G PLH AA G+++ + LLSKGA N G L A G
Sbjct: 292 DEEGWAPLHSAASIGSVEIVETLLSKGADVNLKNNGGRTALHYAASKG 435
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.134 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,453,749
Number of Sequences: 63676
Number of extensions: 456861
Number of successful extensions: 2972
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 2896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of query: 374
length of database: 12,639,632
effective HSP length: 99
effective length of query: 275
effective length of database: 6,335,708
effective search space: 1742319700
effective search space used: 1742319700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146807.6