TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146807.2 + phase: 0 
         (309 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG508280                                                               57  1e-08
TC222199                                                               54  9e-08
BI317622                                                               50  1e-06
BI315644                                                               40  0.001
TC222651 homologue to UP|Q9B8W1 (Q9B8W1) NADH dehydrogenase subu...    32  0.37
TC218751 similar to UP|Q6W6U5 (Q6W6U5) Olfactory receptor family...    31  0.62
TC216808                                                               30  1.1
CD391123                                                               30  1.4
TC205325 similar to UP|Q8L7S4 (Q8L7S4) At1g68060/T23K23_9, parti...    30  1.4
BI426606                                                               30  1.8
TC221593 similar to UP|Q6NN02 (Q6NN02) At4g14450, partial (30%)        29  3.1
TC220920 similar to UP|O65001 (O65001) Terminal ear1, partial (9%)     28  5.3
TC231195 weakly similar to UP|Q94JR2 (Q94JR2) AT5g45310/K9E15_9,...    28  5.3
TC205324 similar to UP|Q8L7S4 (Q8L7S4) At1g68060/T23K23_9, parti...    28  6.9
BI784916 similar to GP|5002200|gb|A msg1-related protein 2 {Mus ...    27  9.0
TC234562 similar to UP|HT22_ARATH (P46604) Homeobox-leucine zipp...    27  9.0

>BG508280 
          Length = 418

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
 Frame = +1

Query: 87  IITGCGDFLNVPLLGTRGGINYNPELAMRQFGFPMKAKPINLATSPEF---FYYSNAPTG 143
           ++  CG F NVPL+GTRG I+YNP LA++Q G+PM   P+    +P     F  +N  T 
Sbjct: 70  VLISCGGFPNVPLMGTRGCISYNPVLAIKQLGYPM*GVPLEDELAPVISRGFNKTNVETL 249

Query: 144 QREAFIGAWSKVCRKSVKHLGVRSGIAHEAYTQWVINRAEEIGMPY-PAMRYVSASAPSI 202
           Q+     AW  + +K  +  G  +G     Y +W+  +A   G+ + P++R         
Sbjct: 250 QKVR--KAWEVLQKKDKELRGSNNG-PIGGYRKWL--KAHVQGLDWLPSLRTAKREEDEA 414

Query: 203 P 203
           P
Sbjct: 415 P 417


>TC222199 
          Length = 691

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
 Frame = +2

Query: 8   HSK-NPVPTLLADTYHAIHDRTLKGRGYILCCVPLLYRWFISHL---------PSSFH-- 55
           HSK +PV  +LAD +   + R  K    I+CC+P L  W +SHL         P   H  
Sbjct: 350 HSKESPVVAVLADLFDTFNRRYEKSSARIICCLPALCVWLVSHLFQQDTRRPCPLLSHRS 529

Query: 56  -DNSENWSYSQRIMALTPNEVVWITPTAQVKE-IITGCGDFLNVPLLGTRG 104
                   + Q +  +    + W     + KE ++  CG + N+PL+GTRG
Sbjct: 530 CTEKRRIDWDQLLAGIGGRTISWFPRWKEGKEGVLFSCGRYPNIPLVGTRG 682


>BI317622 
          Length = 370

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 33/104 (31%), Positives = 44/104 (41%), Gaps = 15/104 (14%)
 Frame = -2

Query: 12  PVPTLLADTYHAIHDRTLKGRGYILCCVPLLYRWFISHL---------PSSFH-----DN 57
           P+  +LAD Y   + R  K    I+CC P LY W +SHL         P   H       
Sbjct: 306 PIVAMLADLYDTFNRRCEKSSTRIVCCTPALYVWLVSHLFRQEVRHACPLESHCSCTEKG 127

Query: 58  SENWSYSQRIMALTPNEVVWITPTAQVK-EIITGCGDFLNVPLL 100
            ENW   Q +       V W     + +  ++  CG FLNVPL+
Sbjct: 126 GENW--GQLLANKEGASVNWFPRWKEGRTRVLISCGVFLNVPLM 1


>BI315644 
          Length = 421

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (73%)
 Frame = +3

Query: 102 TRGGINYNPELAMRQFGFPMKAKPINLATSP 132
           TRG INYNP LA+RQ G+PM+  P + + +P
Sbjct: 276 TRGCINYNPVLAIRQLGYPMRGVPSDESITP 368



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/21 (47%), Positives = 12/21 (56%)
 Frame = +1

Query: 30 KGRGYILCCVPLLYRWFISHL 50
          K    I+CC   LY W +SHL
Sbjct: 4  KSSARIVCCALALYVWLVSHL 66


>TC222651 homologue to UP|Q9B8W1 (Q9B8W1) NADH dehydrogenase subunit 6,
           partial (8%)
          Length = 1006

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
 Frame = -1

Query: 43  YRWFISHLPSSFHDNSENWSYSQRIMA-LTPNEVVWIT---------PTAQVKEIITGCG 92
           Y W I +L   FH N+EN +YS +I+      ++++I+             +K I+    
Sbjct: 628 YLWLIKYL*KDFHINNENQTYSYKILIYFLSTKLIFISIK*ILKTNLKIIYIK*ILKMNL 449

Query: 93  DFLNVPLLGTRGGINYNPELAMRQF 117
           + L +PL     G N+N ++++R F
Sbjct: 448 ETLLLPL-----GSNFNNDISLRDF 389


>TC218751 similar to UP|Q6W6U5 (Q6W6U5) Olfactory receptor family 8 subfamily
           S (Fragment), partial (7%)
          Length = 988

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 20/60 (33%), Positives = 33/60 (54%), Gaps = 4/60 (6%)
 Frame = +2

Query: 215 QEHLAMESREKQ----MWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEK 270
           Q +LA ES E +    +  ++  EAE  I  L+ +  + T E  +LKKEL  ++R++  K
Sbjct: 491 QSNLANESEELKSKLSVMDSKLREAEVTITKLNEERRRNTQEKDLLKKELEVLKRQINTK 670


>TC216808 
          Length = 1144

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/52 (34%), Positives = 25/52 (47%), Gaps = 2/52 (3%)
 Frame = +3

Query: 1   MNAIEIFH--SKNPVPTLLADTYHAIHDRTLKGRGYILCCVPLLYRWFISHL 50
           ++A   FH   ++PV  +LA  Y        K    I+CC   LY W +SHL
Sbjct: 672 IDAFLAFHHGKESPVVAILA-MYDTFDRGCEKSSARIVCCALALYVWLVSHL 824


>CD391123 
          Length = 613

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = -3

Query: 215 QEHLAMESREKQ----MWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEK 270
           Q +LA ES E +    +  ++  EAE  I  L+ +  + T E  +LKKEL  ++R +  K
Sbjct: 470 QSNLAHESEELKSKLSVMDSKLREAEVTITKLNEERRRNTQEKDLLKKELEVLKRPIHTK 291


>TC205325 similar to UP|Q8L7S4 (Q8L7S4) At1g68060/T23K23_9, partial (26%)
          Length = 1204

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +3

Query: 207 PPTTQGMYQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRE 266
           PP+           +  E   WK   ++  N + T+D +D        +L+KE++ +R+ 
Sbjct: 267 PPSYSFNQSSEGTKDGEENDKWKGNSDDKPNDLPTVDTEDSVPGVLYDLLQKEVLALRKA 446

Query: 267 LEEKDELL 274
             EKD+ L
Sbjct: 447 GHEKDQSL 470


>BI426606 
          Length = 357

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/78 (26%), Positives = 39/78 (49%), Gaps = 7/78 (8%)
 Frame = +3

Query: 204 LPLPPTTQGMYQEHLAMESREKQMWKAR-------YNEAENLIMTLDGKDEQKTHENLML 256
           LPLPP  + ++  H  +  R  ++   R       ++EAENL M +DG       +  ++
Sbjct: 93  LPLPPLLRPLHPHHKLLLPRHPKVQLLRHRLHLRLFSEAENLHMNIDG-------DRFLV 251

Query: 257 KKELVKVRRELEEKDELL 274
             EL  +R +  +KD+++
Sbjct: 252 SNEL--LRSKPCDKDDII 299


>TC221593 similar to UP|Q6NN02 (Q6NN02) At4g14450, partial (30%)
          Length = 514

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 179 INRAEEIGMPYPAMRYVSASAPSIPLPLPPTTQGMYQEHLAMESREKQMWK 229
           INRA E  +  P +  +++S P  PLPLPP  +   Q+    E    + W+
Sbjct: 193 INRALEWNVAIPLLSPLASSPP--PLPLPPQKEDPPQQQRPTEKVVFKKWQ 339


>TC220920 similar to UP|O65001 (O65001) Terminal ear1, partial (9%)
          Length = 577

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 190 PAMRYVSASAPSIPLPLPP 208
           P   +VS+S+P++PLP PP
Sbjct: 270 PTSSFVSSSSPTLPLPPPP 214


>TC231195 weakly similar to UP|Q94JR2 (Q94JR2) AT5g45310/K9E15_9, partial
           (16%)
          Length = 634

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
 Frame = +3

Query: 215 QEHLAMESREKQMWKARYNEAENL-------IMTLDGKDEQKTHENLMLKK 258
           QEH  M  +E++M +    E E         I  L+GK   +T+ENL LK+
Sbjct: 360 QEHFQMAVKERKMMEILLAELEEEHDMAIANIEKLEGKLRDQTNENLRLKE 512


>TC205324 similar to UP|Q8L7S4 (Q8L7S4) At1g68060/T23K23_9, partial (19%)
          Length = 980

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +2

Query: 221 ESREKQM---WKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELL 274
           E++E++    WK   ++  N   T+D  D   +     L+KE++ +R+   EKD+ L
Sbjct: 110 ETKEREASDNWKGNSDDKPNDFPTVDSVDSVPSVLYDFLQKEVIALRKAGHEKDQSL 280


>BI784916 similar to GP|5002200|gb|A msg1-related protein 2 {Mus musculus},
           partial (8%)
          Length = 320

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 196 SASAPSIPLPLPPTTQGMYQEHLAME 221
           S +A S+PLP PP  QG+   HL+ E
Sbjct: 149 SMAAASLPLPTPPPAQGLL-PHLSRE 75


>TC234562 similar to UP|HT22_ARATH (P46604) Homeobox-leucine zipper protein
           HAT22 (HD-ZIP protein 22), partial (33%)
          Length = 585

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = +3

Query: 206 LPPTTQGMYQEHLAMESREKQMW------KARYNEAENLIMTLDGKDEQKTHENLMLKKE 259
           L P  +    E L ++ R+ ++W      + +  + E     L    E+ T ENL LKKE
Sbjct: 366 LNPAQKQALAEQLNLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCEKLTDENLRLKKE 545

Query: 260 LVKVRRE 266
           L ++R +
Sbjct: 546 LQELRAQ 566


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.318    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,849,154
Number of Sequences: 63676
Number of extensions: 215787
Number of successful extensions: 1471
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of query: 309
length of database: 12,639,632
effective HSP length: 97
effective length of query: 212
effective length of database: 6,463,060
effective search space: 1370168720
effective search space used: 1370168720
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)