BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146793.2 - phase: 0
(438 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BE821913 similar to GP|10177322|db ATP-dependent RNA helicase-li... 273 9e-74
AW185860 similar to GP|21593647|gb replication protein A1-like {... 261 6e-70
TC226130 homologue to UP|Q9ZS12 (Q9ZS12) RNA helicase, partial (... 211 5e-55
TC224636 homologue to UP|Q8H1A5 (Q8H1A5) DEAD box RNA helicase, ... 200 1e-51
TC227551 homologue to UP|O65879 (O65879) Translation initiation ... 200 1e-51
TC224718 homologue to UP|Q8H1A5 (Q8H1A5) DEAD box RNA helicase, ... 199 3e-51
TC205570 homologue to UP|Q93VJ8 (Q93VJ8) AT5g11200/F2I11_90 (AT5... 196 1e-50
TC206333 homologue to UP|IF4V_TOBAC (Q40465) Eukaryotic initiati... 195 3e-50
TC226496 homologue to UP|Q93VJ8 (Q93VJ8) AT5g11200/F2I11_90 (AT5... 194 5e-50
TC224595 homologue to UP|IF4U_TOBAC (P41382) Eukaryotic initiati... 194 7e-50
TC220021 similar to UP|Q8LPE9 (Q8LPE9) At5g26743, partial (41%) 172 3e-43
TC229568 similar to UP|Q9FFQ1 (Q9FFQ1) RNA helicase, partial (91%) 160 6e-42
TC228534 similar to UP|Q6S4Y1 (Q6S4Y1) DEAD box RNA helicase, pa... 114 3e-39
TC206536 similar to UP|Q9FZ92 (Q9FZ92) F3H9.16 protein, partial ... 157 7e-39
TC216873 similar to UP|Q9SCQ0 (Q9SCQ0) RNA helicase-like protein... 147 1e-35
TC216872 similar to UP|Q9SCQ0 (Q9SCQ0) RNA helicase-like protein... 112 3e-32
TC208183 weakly similar to UP|O49530 (O49530) DEAD box ATP depen... 132 4e-31
TC217408 similar to UP|Q84TG1 (Q84TG1) At3g09720, partial (62%) 123 1e-28
TC224638 homologue to UP|IF47_TOBAC (Q40470) Eukaryotic initiati... 119 4e-27
BE660362 similar to GP|8489871|gb| DEAD box protein P68 {Pisum s... 97 3e-26
>BE821913 similar to GP|10177322|db ATP-dependent RNA helicase-like protein
{Arabidopsis thaliana}, partial (31%)
Length = 615
Score = 273 bits (699), Expect = 9e-74
Identities = 139/158 (87%), Positives = 146/158 (91%), Gaps = 1/158 (0%)
Frame = -1
Query: 282 GHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRT 341
GHMSQ KRLGALNKFKSG+CNILLCTDVASRGLDIP VDMVINYDIPTNSKDYIHRVGRT
Sbjct: 615 GHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRT 436
Query: 342 ARAGRSGVAISLVNQYELEWYVQIEKLIGKKLPEYPANEEEVLLLEERVGEAKRLAATKM 401
ARAGRSGVAISLVNQYELEWY+QIEKLIGKKLPEYPA EEEVLLLEERVGEAKRLA KM
Sbjct: 435 ARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVGEAKRLAVMKM 256
Query: 402 KESGG-KKRRGEGDIGEEDDVDKYFGLKDRKSSKKFRR 438
KE+GG KKRRGE D + +D+DKY GLK+ KSSKKFRR
Sbjct: 255 KETGGKKKRRGEEDY-DGEDIDKYLGLKEGKSSKKFRR 145
>AW185860 similar to GP|21593647|gb replication protein A1-like {Arabidopsis
thaliana}, partial (30%)
Length = 426
Score = 261 bits (666), Expect = 6e-70
Identities = 130/141 (92%), Positives = 136/141 (96%)
Frame = +2
Query: 127 AKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRER 186
AK PHIIVGTPGRV+DHLK+TKGFSL+RLKYLVLDEADRLLNEDFEESLNEIL MIPRER
Sbjct: 2 AKQPHIIVGTPGRVIDHLKHTKGFSLSRLKYLVLDEADRLLNEDFEESLNEILQMIPRER 181
Query: 187 RTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILS 246
RTFL SATMT KV+KLQRVCLRNPVKIE SSKYSTVDTLKQQYRFLPAKHKDCYLVYIL+
Sbjct: 182 RTFLXSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILT 361
Query: 247 EMAGSTSMVFTRTCDSTRLLA 267
EMAGSTSMVFTRTCD+TRLLA
Sbjct: 362 EMAGSTSMVFTRTCDATRLLA 424
>TC226130 homologue to UP|Q9ZS12 (Q9ZS12) RNA helicase, partial (88%)
Length = 2120
Score = 211 bits (537), Expect = 5e-55
Identities = 123/375 (32%), Positives = 210/375 (55%), Gaps = 1/375 (0%)
Frame = +2
Query: 11 FKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPILHA 70
F+D L L+ + G++ P IQ E+IP AL G D++ AK G+GKT AF +P L
Sbjct: 695 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 874
Query: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP 130
+ + N ++ PTRELA+Q S+ + L + ++ V GG + +++ +
Sbjct: 875 IDQDN--NVIQVVILVPTRELALQTSQVCKELAKHLKIQVMVTTGGTSLKDDIMRLYQPV 1048
Query: 131 HIIVGTPGRVLDHLKNTKGFSLAR-LKYLVLDEADRLLNEDFEESLNEILGMIPRERRTF 189
H++VGTPGR+LD K KG + + LV+DEAD+LL+ +F+ S+ +++ +P R+
Sbjct: 1049 HLLVGTPGRILDLAK--KGVCILKDCAMLVMDEADKLLSPEFQPSIEQLIHCLPTTRQIL 1222
Query: 190 LFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILSEMA 249
+FSAT V+ + LR P I + T+ + Q Y F+ + K L + S++
Sbjct: 1223 MFSATFPVTVKDFKDRYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFSKLQ 1399
Query: 250 GSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDV 309
+ S++F + + LLA + LG I+ M Q R + F++G C L+CTD+
Sbjct: 1400 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 1579
Query: 310 ASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLI 369
+RG+DI AV++VIN+D P N++ Y+HRVGR+ R G G+A++L+ + +IE+ +
Sbjct: 1580 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 1759
Query: 370 GKKLPEYPANEEEVL 384
G ++ + P ++ +
Sbjct: 1760 GTEIKQIPPQIDQAI 1804
>TC224636 homologue to UP|Q8H1A5 (Q8H1A5) DEAD box RNA helicase, complete
Length = 1556
Score = 200 bits (508), Expect = 1e-51
Identities = 125/376 (33%), Positives = 204/376 (54%), Gaps = 1/376 (0%)
Frame = +2
Query: 10 SFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPILH 69
SF +GL E+L+ G++ P IQ I P +G D+I A++G+GKT F IL
Sbjct: 215 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 394
Query: 70 ALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKL 129
L + A V++PTRELA QI + ALG +GVK VGG + + ++
Sbjct: 395 QLDYSLTQCQ--ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSG 568
Query: 130 PHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRERRTF 189
H++VGTPGRV D L+ + +K VLDEAD +L+ F++ + +I ++P + +
Sbjct: 569 VHVVVGTPGRVFDMLRR-QSLLPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVG 745
Query: 190 LFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKH-KDCYLVYILSEM 248
+FSATM + ++ R + PV+I T++ +KQ Y + + K L + +
Sbjct: 746 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEREDWKLDTLCDLYETL 925
Query: 249 AGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTD 308
A + S++F T L +R+ +G M Q R + +F+SG +L+ TD
Sbjct: 926 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 1105
Query: 309 VASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKL 368
+ +RG+D+ V +VIN+D+PT ++Y+HR+GR+ R GR GVAI+ V + + + I+K
Sbjct: 1106LLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDEKMLFDIQKF 1285
Query: 369 IGKKLPEYPANEEEVL 384
++ E P+N E+L
Sbjct: 1286YNVQVEELPSNVAELL 1333
>TC227551 homologue to UP|O65879 (O65879) Translation initiation factor,
complete
Length = 1632
Score = 200 bits (508), Expect = 1e-51
Identities = 115/380 (30%), Positives = 209/380 (54%), Gaps = 1/380 (0%)
Frame = +2
Query: 6 KEMKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFAL 65
K + SF+++G+ + L+ + G++ P IQ A+ P ++G+D+I A++G+GKT AL
Sbjct: 191 KAIASFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVTPIIQGRDVIAQAQSGTGKTSMIAL 370
Query: 66 PILHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVK 125
+ + + R A ++SPTRELA Q + A+G I ++ VGG + + K
Sbjct: 371 TVCQVVDTSVREVQ--ALILSPTRELASQTEKVILAIGDFINIQAHACVGGKSVGEDIRK 544
Query: 126 IAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRE 185
+ H++ GTPGRV D +K + +K LVLDE+D +L+ F++ + ++ +P +
Sbjct: 545 LEYGVHVVSGTPGRVCDMIKR-RTLRTRAIKMLVLDESDEMLSRGFKDQIYDVYRYLPPD 721
Query: 186 RRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKH-KDCYLVYI 244
+ L SAT+ +++ ++ + +PV+I T++ +KQ + + + K L +
Sbjct: 722 LQVCLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 901
Query: 245 LSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNIL 304
+ + +++F T L +RN ++G M Q +R + +F++G +L
Sbjct: 902 YDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSSMHGDMPQKERDAIMGEFRAGTTRVL 1081
Query: 305 LCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQ 364
+ TDV +RGLD+ V +VINYD+P N + YIHR+GR+ R GR GVAI+ V +++
Sbjct: 1082ITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRD 1261
Query: 365 IEKLIGKKLPEYPANEEEVL 384
IE+ ++ E P N +++
Sbjct: 1262IEQYYSTQIDEMPMNVADLI 1321
>TC224718 homologue to UP|Q8H1A5 (Q8H1A5) DEAD box RNA helicase, complete
Length = 1624
Score = 199 bits (505), Expect = 3e-51
Identities = 125/376 (33%), Positives = 203/376 (53%), Gaps = 1/376 (0%)
Frame = +3
Query: 10 SFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPILH 69
SF +GL E+L+ G++ P IQ I P +G D+I A++G+GKT F IL
Sbjct: 267 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 446
Query: 70 ALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKL 129
L + A V++PTRELA QI + ALG +GVK VGG + + ++
Sbjct: 447 QLDYSVTECQ--ALVLAPTRELAQQIEKVMRALGEYLGVKVHACVGGTSVREDQRILSSG 620
Query: 130 PHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRERRTF 189
H++VGTPGRV D L+ + +K VLDEAD +L+ F++ + +I ++P + +
Sbjct: 621 VHVVVGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVG 797
Query: 190 LFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKH-KDCYLVYILSEM 248
+FSATM + ++ R + PV+I T++ +KQ + + + K L + +
Sbjct: 798 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLDTLCDLYETL 977
Query: 249 AGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTD 308
A + S++F T L +R+ +G M Q R + +F+SG +L+ TD
Sbjct: 978 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 1157
Query: 309 VASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKL 368
+ +RG+D+ V +VINYD+PT ++Y+HR+GR+ R GR GVAI+ V + + + I+K
Sbjct: 1158LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDEKMLFDIQKF 1337
Query: 369 IGKKLPEYPANEEEVL 384
+ E P+N E+L
Sbjct: 1338YNVIIEELPSNVAELL 1385
>TC205570 homologue to UP|Q93VJ8 (Q93VJ8) AT5g11200/F2I11_90
(AT5g11170/F2I11_60), partial (98%)
Length = 1745
Score = 196 bits (499), Expect = 1e-50
Identities = 121/349 (34%), Positives = 194/349 (54%), Gaps = 4/349 (1%)
Frame = +1
Query: 11 FKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPILHA 70
F+D L L+ A G++ P E+Q E IP A+ G D+I AK+G GKT F L L
Sbjct: 262 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 441
Query: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDM-VQQSVKIAK 128
+ P P A V+ TRELA QI +FE + + +K AV GG+++ V + + +
Sbjct: 442 I--DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNE 615
Query: 129 LPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNE-DFEESLNEILGMIPRERR 187
PHI+VGTPGR+L L K SL +++ +LDE D++L D + + +I M P +++
Sbjct: 616 CPHIVVGTPGRILA-LTRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQ 792
Query: 188 TFLFSATMTNKVEKLQRVCLRNPVKIETSSKYS-TVDTLKQQYRFLPAKHKDCYLVYILS 246
+FSAT++ ++ + + +++P++I + T+ L Q Y L + K+ L +L
Sbjct: 793 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLD 972
Query: 247 EMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLC 306
+ + ++F ++ L +L +I I+ MSQ +RL FK G IL+
Sbjct: 973 ALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVA 1152
Query: 307 TDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVN 355
TD+ RG+DI V++VINYD+P ++ Y+HRVGR R G G+AI+ V+
Sbjct: 1153TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 1299
>TC206333 homologue to UP|IF4V_TOBAC (Q40465) Eukaryotic initiation factor
4A-11 (eIF4A-11) (eIF-4A-11), partial (92%)
Length = 1625
Score = 195 bits (496), Expect = 3e-50
Identities = 125/386 (32%), Positives = 206/386 (52%), Gaps = 8/386 (2%)
Frame = +1
Query: 7 EMKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALP 66
E F +GL E+L+ G++ P IQ I P +G D+I A++G+GKT F
Sbjct: 166 EGSQFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 345
Query: 67 IL----HALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQ 122
+L ++L+E A V++PTRELA QI + ALG +GVK V VGG + +
Sbjct: 346 VLQQLDYSLVECQ------ALVLAPTRELAQQIEKVMRALGDYLGVKVHVCVGGTIVRED 507
Query: 123 SVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMI 182
++ H++VGTPGRV D L + ++ VLDEAD +L+ F++ + +I ++
Sbjct: 508 QRILSSGVHVVVGTPGRVFDMLCR-QSLRPDNIRMFVLDEADEMLSRGFKDQIYDIFQLL 684
Query: 183 PRERRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLV 242
P + + +FSATM + ++ R + PV+I T++ +KQ F K+ + +
Sbjct: 685 PPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ---FFVNVDKEDWKL 855
Query: 243 YILSEM----AGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKS 298
L ++ A + S++F T L +R+ +G M Q R + +F+S
Sbjct: 856 ETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS 1035
Query: 299 GDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYE 358
G +L+ TD+ +RG+D+ V +VINYD+PT ++Y+HR+GR+ R GR GVAI+ V +
Sbjct: 1036GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTGDD 1215
Query: 359 LEWYVQIEKLIGKKLPEYPANEEEVL 384
I+K ++ E PAN +++
Sbjct: 1216ERMLFDIQKFYNVQIEELPANVADLI 1293
>TC226496 homologue to UP|Q93VJ8 (Q93VJ8) AT5g11200/F2I11_90
(AT5g11170/F2I11_60), partial (98%)
Length = 1674
Score = 194 bits (494), Expect = 5e-50
Identities = 125/371 (33%), Positives = 199/371 (52%), Gaps = 13/371 (3%)
Frame = +1
Query: 11 FKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPILHA 70
F+D L L+ A G++ P E+Q E IP A+ G D+I AK+G GKT F L L
Sbjct: 190 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 369
Query: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDM-VQQSVKIAK 128
+ P P A V+ TRELA QI +FE + + +K AV GG+++ V + + +
Sbjct: 370 V--DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKAAVFYGGVNIKVHKELLKNE 543
Query: 129 LPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNE-DFEESLNEILGMIPRERR 187
PHI+VGTPGR+L L K L +++ +LDE D++L D + EI + P +++
Sbjct: 544 CPHIVVGTPGRILA-LARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 720
Query: 188 TFLFSATMTNKVEKLQRVCLRNPVKIETSSKYS-TVDTLKQQYRFLPAKHKDCYLVYILS 246
+FSAT++ ++ + + +++P++I + T+ L Q Y L K+ L +L
Sbjct: 721 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQETEKNRKLNDLLD 900
Query: 247 EMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLC 306
+ + ++F ++ L +L +I I+ MSQ +RL FK G IL+
Sbjct: 901 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSAMSQEERLKRYKGFKEGKQRILVA 1080
Query: 307 TDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV---------NQY 357
TD+ RG+DI V++VINYD+P ++ Y+HRVGR R G G+AI+ V NQ
Sbjct: 1081TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTADSEVLNQV 1260
Query: 358 ELEWYVQIEKL 368
+ + V I++L
Sbjct: 1261QSRFEVDIKEL 1293
>TC224595 homologue to UP|IF4U_TOBAC (P41382) Eukaryotic initiation factor
4A-10 (eIF4A-10) (eIF-4A-10), complete
Length = 1515
Score = 194 bits (493), Expect = 7e-50
Identities = 125/380 (32%), Positives = 201/380 (52%), Gaps = 5/380 (1%)
Frame = +1
Query: 10 SFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPIL- 68
SF +GL E+L+ G++ P IQ I P +G D+I A++G+GKT F IL
Sbjct: 196 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 375
Query: 69 ---HALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVK 125
+ L++ A V++PTRELA QI + ALG +GVK VGG + +
Sbjct: 376 QLDYGLVQCQ------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 537
Query: 126 IAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRE 185
+ H +VGTPGRV D L+ + +K VLDEAD +L+ F++ + +I ++P +
Sbjct: 538 LQAGVHTVVGTPGRVFDMLRR-QSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPSK 714
Query: 186 RRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYIL 245
+ +FSATM + ++ R + PV+I T++ +KQ Y + + + L
Sbjct: 715 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDL 894
Query: 246 SE-MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNIL 304
E +A + S++F T L +R+ +G M Q R + +F+SG +L
Sbjct: 895 YETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 1074
Query: 305 LCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQ 364
+ TD+ +RG+D+ V +VINYD+PT ++Y+HR+GR+ R GR GVAI+ V +
Sbjct: 1075ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDSRMLSD 1254
Query: 365 IEKLIGKKLPEYPANEEEVL 384
I+K + E P+N ++L
Sbjct: 1255IQKFYNVTVEELPSNVADLL 1314
>TC220021 similar to UP|Q8LPE9 (Q8LPE9) At5g26743, partial (41%)
Length = 935
Score = 172 bits (436), Expect = 3e-43
Identities = 105/292 (35%), Positives = 170/292 (57%), Gaps = 3/292 (1%)
Frame = +1
Query: 84 VMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGRVLDH 143
V++PTRELA Q+ ++ + + C + GG+ V Q +++ ++VGTPGR++D
Sbjct: 52 VLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVSYVTQQSALSRGVDVVVGTPGRIID- 222
Query: 144 LKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRERRTFLFSATMTNKVEKLQ 203
L N L+ ++YLVLDEAD++L FEE + IL +P +R++ LFSATM + V+KL
Sbjct: 223 LINGNSLKLSEVQYLVLDEADQMLAVGFEEDVEMILENLPSQRQSMLFSATMPSWVKKLA 402
Query: 204 RVCLRNPVKIET--SSKYSTVDTLKQQYRFLPAKHKDCYLVYILSEMA-GSTSMVFTRTC 260
R L NP+ I+ + + +K A K L +++ A G ++VFT+T
Sbjct: 403 RKYLNNPLTIDLVGDEEEKLAEGIKLYAIAATATSKRTILSDLVTVYAKGGKTIVFTQTK 582
Query: 261 DSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVD 320
++L L N + + ++G +SQ +R LN F+ G +L+ TDVA+RGLDIP VD
Sbjct: 583 RDADEVSLSLTN-SIMSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVD 759
Query: 321 MVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLIGKK 372
++I+Y++P + + ++HR GRT RAG+ G AI L + +E+ +G K
Sbjct: 760 LIIHYELPNDPETFVHRSGRTGRAGKQGNAILLYTSSQRRTVRSLERDVGCK 915
>TC229568 similar to UP|Q9FFQ1 (Q9FFQ1) RNA helicase, partial (91%)
Length = 1635
Score = 160 bits (405), Expect(2) = 6e-42
Identities = 120/386 (31%), Positives = 198/386 (51%), Gaps = 19/386 (4%)
Frame = +3
Query: 58 GKTGAFALPILHALLEAP------RPNHFFACVMSPTRELAIQISEQFEAL---GSEIGV 108
GKT AF LP + + ++P R V+ PTRELA Q + + L IGV
Sbjct: 234 GKTVAFLLPSIEVVAKSPPSDRDHRRPPISVLVICPTRELASQAAAEATKLLKYHPTIGV 413
Query: 109 KCAVLVGGIDMVQQSVKIAKLP-HIIVGTPGRVLDHLKNTKGFS--LARLKYLVLDEADR 165
+ V++GG + + ++ P I+V TPGR+ DH +NT GF+ L +K LVLDEAD
Sbjct: 414 Q--VVIGGTRLALEQKRMQANPCQILVATPGRLRDHTENTAGFATRLMGVKVLVLDEADH 587
Query: 166 LLNEDFEESLNEILGMIPRERRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTL 225
LL+ F + + +I+ +P++R+T +FSAT+ +V ++ + LR + + + T +T
Sbjct: 588 LLDMGFRKDIEKIIAAVPKQRQTLMFSATVPEEVRQVCHIALRRDHEFINTVQEGTEETH 767
Query: 226 KQ--QYRFLPAKHKDCYLVYIL-----SEMAGSTSMVFTRTCDSTRLLALILRNLGLKAI 278
Q Q + K L+Y+L ++ +VF T TRL+A +L L L
Sbjct: 768 SQVRQTHLVAPLDKHFSLLYVLLKDHIADDVDYKVLVFCTTAMVTRLVAELLGELNLNVR 947
Query: 279 PINGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRV 338
I+ Q R +F+ IL+ +DV++RG+D P V +VI +P + + YIHR+
Sbjct: 948 EIHSRKPQSYRTRVSEEFRRSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRL 1127
Query: 339 GRTARAGRSGVAISLVNQYELEWYVQIEKLIGKKLPEYPANEEEVLLLEERVGEAKRLAA 398
GRT R G+ G I L+ +E + ++ L +K P P+ + + +++V +A
Sbjct: 1128GRTGRRGKEGQGILLLAPWEDFFLSTVKDLPIEKAPVLPSVDPDT---KKKVEKALSHVE 1298
Query: 399 TKMKESGGKKRRGEGDIGEEDDVDKY 424
K KE+ + G + ++ DKY
Sbjct: 1299MKHKEAAYQAWLGYYNSNKKVGRDKY 1376
Score = 28.9 bits (63), Expect(2) = 6e-42
Identities = 12/42 (28%), Positives = 24/42 (56%)
Frame = +2
Query: 21 VEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGA 62
++ + G++ +Q +P L+GKD++ AKTG+ K +
Sbjct: 122 LKGVKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTXKNSS 247
>TC228534 similar to UP|Q6S4Y1 (Q6S4Y1) DEAD box RNA helicase, partial (53%)
Length = 939
Score = 114 bits (285), Expect(2) = 3e-39
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Frame = +1
Query: 171 FEESLNEILGMIPRERRTFLFSATMTNKVEKLQRVCLRNPVKIET-SSKYSTVDTLKQQY 229
F+ L +I+ I +R+T +SAT +VE+L R L NP K+ SS ++Q
Sbjct: 313 FDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSSDLKANHAIRQYV 492
Query: 230 RFLPAKHKDCYLVYILSE-MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPK 288
+ K K LV +L + M GS ++F T + LR G A+ I+G SQ +
Sbjct: 493 DIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 672
Query: 289 RLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSG 348
R L++FKSG I+ TDVA+RGLD+ V V+NYD P + +DY+HR+GRT RAG G
Sbjct: 673 RDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVVNYDFPGSLEDYVHRIGRTGRAGAKG 852
Query: 349 VA 350
A
Sbjct: 853 TA 858
Score = 65.9 bits (159), Expect(2) = 3e-39
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = +3
Query: 84 VMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGRVLDH 143
V++PTRELA+QI ++ G+ +K + GG+ Q + K I++ TPGR++D
Sbjct: 54 VLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 233
Query: 144 LKNTKGFSLARLKYLVLDEADRLLN 168
L++ +L R+ YLVLDEADR+L+
Sbjct: 234 LESNH-TNLQRVTYLVLDEADRMLD 305
>TC206536 similar to UP|Q9FZ92 (Q9FZ92) F3H9.16 protein, partial (45%)
Length = 1221
Score = 157 bits (398), Expect = 7e-39
Identities = 94/281 (33%), Positives = 152/281 (53%), Gaps = 17/281 (6%)
Frame = +1
Query: 106 IGVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADR 165
+G+K +VGG + +Q KI + I++ TPGR++D L+ L + Y+VLDEADR
Sbjct: 7 LGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAV-LNQCNYVVLDEADR 183
Query: 166 LLNEDFEESLNEILGMIPRE-----------------RRTFLFSATMTNKVEKLQRVCLR 208
+++ FE + +L +P R T++FSATM VE+L R LR
Sbjct: 184 MIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLR 363
Query: 209 NPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILSEMAGSTSMVFTRTCDSTRLLAL 268
NPV + + D + Q + K L +L E+ T++VF T + +A
Sbjct: 364 NPVVVTIGTAGKATDLISQHVIMMKEAEKFSKLHRLLDELNDKTAIVFVNTKKNADHVAK 543
Query: 269 ILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIP 328
L G + ++G SQ +R +L F++ N+L+ TDVA RG+DIP V VINYD+P
Sbjct: 544 NLDKDGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 723
Query: 329 TNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLI 369
N + Y HR+GRT RAG++GVA + + ++ + + +++++
Sbjct: 724 GNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQML 846
>TC216873 similar to UP|Q9SCQ0 (Q9SCQ0) RNA helicase-like protein
(At3g53110), partial (67%)
Length = 1840
Score = 147 bits (370), Expect = 1e-35
Identities = 124/397 (31%), Positives = 195/397 (48%), Gaps = 25/397 (6%)
Frame = +2
Query: 11 FKDLGL-PESLVEACEKVGWKTPLEIQIEAIPPALE--GKDLIGLAKTGSGKTGAFALPI 67
F+DL L PE L ++ ++ P +IQ ++P L +DLI A GSGKT F L +
Sbjct: 335 FEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMILSPPNRDLIAQAHNGSGKTTCFVLGM 514
Query: 68 LHAL---LEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVG-GIDMVQQS 123
L + ++AP+ A + PTRELAIQ E +G G+ LV D V S
Sbjct: 515 LSRVDPKVQAPQ-----ALCICPTRELAIQNIEVLRRMGKYTGIASECLVPLDRDAVHVS 679
Query: 124 VKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNED-FEESLNEILGMI 182
+ + +++GTPG V + + K RL+ LV DEAD++L ED F + I+ I
Sbjct: 680 KRAPIMAQVVIGTPGTVKKFI-SFKKLGTTRLRILVFDEADQMLAEDGFRDDSLRIMKDI 856
Query: 183 PRER---RTFLFSATMTNKVEK-LQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKD 238
+E + LFSAT + V+ + R + K+ + ++D +KQ + P +
Sbjct: 857 EKENSKCQVLLFSATFNDTVKNFVSRTVRMDHNKLFVKKEELSLDAVKQYKVYCPDELAK 1036
Query: 239 CYLV----YILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALN 294
+V + + E G T ++F R+ + RL L LG + I G +S +R +
Sbjct: 1037IDVVKDYIFEIGENVGQT-IIFVRSKITARLTHEALVKLGYEVTSIQGSLSNEERDKVVK 1213
Query: 295 KFKSGDCNILLCTDVASRGLDIPAVDMVINYDIP--------TNSKDYIHRVGRTARAGR 346
+FK G +L+ TD+ +RG D V++VINYD+P + + Y+HRVGR R GR
Sbjct: 1214EFKDGLTQVLISTDILARGFDQQQVNLVINYDLPKKYGVRDEPDYEVYLHRVGRAGRFGR 1393
Query: 347 SGVAISLV-NQYELEWYVQIEKLIGKKLPEYPANEEE 382
G +L+ + + +IE G ++ E A E
Sbjct: 1394KGAVFNLICGELDERLMSKIENHFGTRVTEVRAQSVE 1504
>TC216872 similar to UP|Q9SCQ0 (Q9SCQ0) RNA helicase-like protein
(At3g53110), partial (64%)
Length = 1702
Score = 112 bits (280), Expect(2) = 3e-32
Identities = 85/296 (28%), Positives = 147/296 (48%), Gaps = 26/296 (8%)
Frame = +1
Query: 118 DMVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLL-NEDFEESLN 176
D V S + + +++GTPG + + + K +RLK LV DEAD++L E F +
Sbjct: 661 DAVHVSKRAPIMAQVVIGTPGTIKKFI-SFKKLGTSRLKILVFDEADQMLAQEGFRDDSL 837
Query: 177 EILGMIPRERR---TFLFSATMTNKVEK-LQRVCLRNPVKIETSSKYSTVDTLKQQYRFL 232
+I+ I ++ + LFSAT + V+ + R + K+ + ++D +KQ +
Sbjct: 838 KIMKDIEKDNKKCQVLLFSATFNDTVKNFISRTVKMDHNKLFVKKEELSLDAVKQYKVYC 1017
Query: 233 PAKHKDCYLV----YILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPK 288
P + ++ + + E G T ++F T DS RLL L NLG + I G +S +
Sbjct: 1018PDELAKIDVIKDYIFEIGENVGQT-IIFMATRDSARLLHQALVNLGYEVTSIQGSLSNEE 1194
Query: 289 RLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPT--------NSKDYIHRVGR 340
R + +FK G +L+ TD+ +RG D V++VINY++P + + Y+HRVGR
Sbjct: 1195RDKVVKEFKDGLTQVLISTDILARGFDQQQVNLVINYNLPNKHSLRDEPDYEVYLHRVGR 1374
Query: 341 TARAGRSGVAISLV---------NQYELEWYVQIEKLIGKKLPEYPANEEEVLLLE 387
R GR G +L+ ++ E + + ++ + + EY A +E LL+
Sbjct: 1375AGRFGRKGAVFNLICDENDERLMSKIENHFGTCVTEVRAQSVEEYKAALKEAGLLQ 1542
Score = 44.3 bits (103), Expect(2) = 3e-32
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +3
Query: 11 FKDLGL-PESLVEACEKVGWKTPLEIQIEAIPPALEG--KDLIGLAKTGSGKTGAFALPI 67
F+DL L PE L ++ ++ P +IQ ++P L +DLI A GSGKT F L +
Sbjct: 330 FEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMILSPPHRDLIAQAHNGSGKTTCFVLGM 509
Query: 68 LHAL---LEAPRPNHFFACVMSPTRELAIQISEQ 98
L + ++AP+ A + PTRELAIQ E+
Sbjct: 510 LSRVDPKVQAPQ-----ALCVCPTRELAIQNVEE 596
>TC208183 weakly similar to UP|O49530 (O49530) DEAD box ATP dependent
helicase protein (ATP-dependent RNA helicase-like),
partial (34%)
Length = 668
Score = 132 bits (331), Expect = 4e-31
Identities = 77/203 (37%), Positives = 113/203 (54%), Gaps = 4/203 (1%)
Frame = +3
Query: 163 ADRLLNEDFEESLNEILGMIPRERRTFLFSATMTNKVEKLQRVCLRNP---VKIETSSKY 219
ADR+L +FEE + +I+ ++P++R+T LFSAT T KV+ L R+ + + ++ K
Sbjct: 3 ADRILEANFEEEMKQIINILPKKRQTALFSATQTKKVKDLARLSFQTTPIYIDVDDGRKK 182
Query: 220 STVDTLKQQYRFLPAKHKDCYLVYILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIP 279
T + L+Q Y + + L L MVF +C+S + A +L+ GL +
Sbjct: 183 VTNEGLQQGYVVVHCAKRFVVLYSFLRRYQSKKVMVFFSSCNSVKFHADLLKCTGLDCLN 362
Query: 280 INGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVG 339
I+G Q R F + ILLCTDVA+RGLDIP VD ++ YD P K+YIHRVG
Sbjct: 363 IHGKQKQHARTTTFFNFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVG 542
Query: 340 RTARA-GRSGVAISLVNQYELEW 361
RTAR G G A+ + EL++
Sbjct: 543 RTARGEGGKGNALLFLIPEELQF 611
>TC217408 similar to UP|Q84TG1 (Q84TG1) At3g09720, partial (62%)
Length = 1368
Score = 123 bits (309), Expect = 1e-28
Identities = 84/312 (26%), Positives = 162/312 (51%), Gaps = 7/312 (2%)
Frame = +1
Query: 72 LEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP- 130
L+ P A ++ TREL++Q + + L + ++ + ++ +K P
Sbjct: 22 LKDPEKGSIRAVILCHTRELSVQTYRECKKLAKRKKFRIKLMTKNL---LRNADFSKFPC 192
Query: 131 HIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMI--PRERRT 188
+++ TP R+ +K K L+R++YLVLDE+D+L + + ++ ++ P R+
Sbjct: 193 DVLISTPLRLRLAIKRKK-IDLSRVEYLVLDESDKLFEPELFKQIDSVIKACSNPSIIRS 369
Query: 189 FLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLV-YILSE 247
LFSAT+ + VE R + + V++ K +T+KQ+ F ++ + +E
Sbjct: 370 -LFSATLPDFVEDRARELMHDAVRVIVGRKNMASETIKQKLVFTGSEEGKLLAIRQSFAE 546
Query: 248 MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCT 307
+VF ++ + + L L ++ I+ +SQ +R A++ F++G +L+ T
Sbjct: 547 SLNPPVLVFLQSKERAKELCSELAFDSIRVDVIHSDLSQAERENAVDNFRAGKTWVLIAT 726
Query: 308 DVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEK 367
DV +RG+D V+ VINYD P ++ Y+HR+GR+ RAGR+G AI+ + ++ + +
Sbjct: 727 DVVARGMDFKGVNCVINYDFPDSAAAYVHRIGRSGRAGRTGEAITFYTEDDIPFLRNVAN 906
Query: 368 LI---GKKLPEY 376
L+ G ++P Y
Sbjct: 907 LMAASGCEVPSY 942
>TC224638 homologue to UP|IF47_TOBAC (Q40470) Eukaryotic initiation factor
4A-7 (eIF4A-7) (eIF-4A-7), partial (65%)
Length = 961
Score = 119 bits (297), Expect = 4e-27
Identities = 76/224 (33%), Positives = 119/224 (52%), Gaps = 4/224 (1%)
Frame = +3
Query: 10 SFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPIL- 68
SF +GL E+L+ G++ P IQ I P +G D+I A++G+GKT F IL
Sbjct: 270 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 449
Query: 69 ---HALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVK 125
+ L++ A V++PTRELA QI + ALG +GVK VGG + +
Sbjct: 450 QLDYGLVQCQ------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 611
Query: 126 IAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRE 185
+ H +VGTPGRV D L+ + +K VLDEAD +L+ ++ + +I ++P +
Sbjct: 612 LQAGVHTVVGTPGRVFDMLRR-QSLRPDHIKMFVLDEADEMLSRGLKDQIYDIFQLLPGQ 788
Query: 186 RRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQY 229
+ +FSATM + ++ R + PV+I T++ +KQ Y
Sbjct: 789 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQVY 920
>BE660362 similar to GP|8489871|gb| DEAD box protein P68 {Pisum sativum},
partial (36%)
Length = 726
Score = 97.4 bits (241), Expect(2) = 3e-26
Identities = 59/152 (38%), Positives = 94/152 (61%), Gaps = 6/152 (3%)
Frame = +2
Query: 8 MKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPI 67
++SF D+ L S+++ + P IQ +A+P AL G+DL+G A+TGSGKT AF +P+
Sbjct: 50 IESFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 229
Query: 68 L-HALLEAP--RPNHFFACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDMVQQS 123
+ H L + P R + A V++PTRELA QI ++ +A + +K A++VGG ++ +Q
Sbjct: 230 IQHCLAQHPIRRNDGPLALVLAPTRELAQQIEKEVKAFSRSLESLKTAIVVGGTNIEKQR 409
Query: 124 VKIAKLPHIIVGTPGRVLDHLK--NTKGFSLA 153
++ I V TPGR +DHL+ NT F ++
Sbjct: 410 SELRAGVEIAVATPGRFIDHLQQGNTSLFRIS 505
Score = 39.3 bits (90), Expect(2) = 3e-26
Identities = 19/59 (32%), Positives = 35/59 (59%)
Frame = +1
Query: 160 LDEADRLLNEDFEESLNEILGMIPRERRTFLFSATMTNKVEKLQRVCLRNPVKIETSSK 218
LDEADR+L+ FE + ++ + + +T L +ATM + E+L + L P++++ K
Sbjct: 514 LDEADRMLDMGFEPQIRXVMRNLXEKHQTLLVNATMPVENEELSKEXLAYPMQVKGGEK 690
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.137 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,316,185
Number of Sequences: 63676
Number of extensions: 202716
Number of successful extensions: 1146
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of query: 438
length of database: 12,639,632
effective HSP length: 100
effective length of query: 338
effective length of database: 6,272,032
effective search space: 2119946816
effective search space used: 2119946816
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146793.2