
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146792.2 + phase: 0
(577 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC210794 similar to UP|O64785 (O64785) T1F9.16 (At1g61350/T1F9_1... 222 3e-58
TC235060 weakly similar to UP|O64785 (O64785) T1F9.16 (At1g61350... 206 3e-53
TC217992 166 2e-41
TC217991 101 8e-22
BG315791 similar to PIR|B96639|B966 protein T1F9.16 [imported] -... 91 2e-18
CO979270 89 7e-18
TC222425 weakly similar to UP|Q9FI58 (Q9FI58) Arabidopsis thalia... 64 2e-10
BM526012 55 7e-08
TC209667 similar to GB|BAC22265.1|24414015|AP003803 arm repeat c... 53 3e-07
TC230034 44 2e-04
TC210964 similar to UP|Q84TU4 (Q84TU4) Arm repeat-containing pro... 44 2e-04
TC227847 similar to UP|O22161 (O22161) F-box protein family, AtF... 38 0.014
TC216817 weakly similar to UP|KHLX_HUMAN (Q9Y2M5) Kelch-like pro... 37 0.032
TC234733 similar to UP|Q9SNC6 (Q9SNC6) Arm repeat containing pro... 36 0.041
TC216816 weakly similar to UP|KHLX_HUMAN (Q9Y2M5) Kelch-like pro... 35 0.070
TC216726 similar to UP|Q9SNC6 (Q9SNC6) Arm repeat containing pro... 35 0.070
BU765405 34 0.16
TC204894 similar to UP|Q94KA9 (Q94KA9) Importin alpha 2, partial... 33 0.46
TC221625 similar to UP|O82783 (O82783) Importin alpha 2 subunit ... 32 1.0
TC220934 similar to UP|Q7X9B2 (Q7X9B2) 9/13 hydroperoxide lyase,... 31 1.7
>TC210794 similar to UP|O64785 (O64785) T1F9.16 (At1g61350/T1F9_16), partial
(22%)
Length = 701
Score = 222 bits (566), Expect = 3e-58
Identities = 114/126 (90%), Positives = 119/126 (93%)
Frame = +3
Query: 452 AGFMVEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNS 511
A FM EFVKFLNAKSFEVREMAAEALSGMV VPRNRKRFVQDDHNIAL+LQLLDPEEGNS
Sbjct: 6 ARFMPEFVKFLNAKSFEVREMAAEALSGMVMVPRNRKRFVQDDHNIALILQLLDPEEGNS 185
Query: 512 GNKKFLISILMSLTSCNSARKKIVSSGYAKNIDKLADAEVSCDAKKLVKKLSTNRFRSML 571
GNKKFLISILMSLT+C S RKKIVSSGYAKNI+KLADAEVS DAK+LVKKLSTNRFRSML
Sbjct: 186 GNKKFLISILMSLTNCTSGRKKIVSSGYAKNIEKLADAEVSSDAKRLVKKLSTNRFRSML 365
Query: 572 NGIWHS 577
+GIW S
Sbjct: 366 SGIWRS 383
>TC235060 weakly similar to UP|O64785 (O64785) T1F9.16 (At1g61350/T1F9_16),
partial (16%)
Length = 455
Score = 206 bits (523), Expect = 3e-53
Identities = 106/121 (87%), Positives = 112/121 (91%)
Frame = +2
Query: 457 EFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKF 516
E VKFLNAKSFEVREMAAEALS MV V +NRKRFVQDD NIALLLQLLDP EGNSGNKK
Sbjct: 2 ELVKFLNAKSFEVREMAAEALSRMVMVAKNRKRFVQDDQNIALLLQLLDPGEGNSGNKKL 181
Query: 517 LISILMSLTSCNSARKKIVSSGYAKNIDKLADAEVSCDAKKLVKKLSTNRFRSMLNGIWH 576
LISILMSLTSCNS RKKIVSSGYAKNI++LA+AEVS DAK+LV+KLSTNRFRSMLNGIWH
Sbjct: 182 LISILMSLTSCNSGRKKIVSSGYAKNIERLAEAEVSSDAKRLVRKLSTNRFRSMLNGIWH 361
Query: 577 S 577
S
Sbjct: 362 S 364
>TC217992
Length = 1097
Score = 166 bits (421), Expect = 2e-41
Identities = 121/363 (33%), Positives = 195/363 (53%), Gaps = 14/363 (3%)
Frame = +1
Query: 28 LICSLLSLTLSIRVFAGKWQLIRNKLEELHSGLIAAENSDSGENPSLSR------LVTSI 81
L+ +L ++ FAG+W++I KLE++ S L SD +P S+ + ++
Sbjct: 1 LVPVVLDKAREVKGFAGRWKMIVAKLEQIPSQL-----SDLSSHPCFSKNALCKEQLQAV 165
Query: 82 VATVKECHDLGQRCVDFSYSGKLLMQSDLDVAFSKLDGLAKKLSEIYRTGILTNGFALVV 141
T+ E +L + CV Y GKL MQSDLD KLD + + +TG+L G A +
Sbjct: 166 SKTLGEAIELAELCVKEKYEGKLRMQSDLDALAGKLDLNLRDCGLLIKTGVL--GEATLP 339
Query: 142 SKPCLGACKEDMRFY--VRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSD 199
+ D+ + +R++L R++IG L K +AL +++E + EDEK V + V+ S+
Sbjct: 340 LTVSSSVAESDVATHNNIRELLARLQIGHLEAKHRALDSVVEAMKEDEKSV-LAVLGRSN 516
Query: 200 VVHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVA 259
+ LV L + I+E++ V+C LA S + L+S GV+ PLIR+++ GS +GK
Sbjct: 517 IA-ALVQLLTATSPRIREKTVTVICSLAETGSCENWLVSEGVLPPLIRLVESGSVVGKEK 693
Query: 260 AARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRNLVGVEEVKRF 319
A L +L+ +++ A A+ HGGV L+ +C D AC L+N+ V EV++
Sbjct: 694 ATISLQRLSMSAETARAIVGHGGVRPLVALCQTGDSVSQ-AAAAC-TLKNISAVPEVRQA 867
Query: 320 MVEEDAVSTFIRLVK------SKEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLR 373
+ EE V+ I L+ SKE A + +QN+ +E +R+ VI EGG+R+LL
Sbjct: 868 LAEEGIVTVMINLLNCGILLGSKEHAAEC-----LQNLTASNENLRKSVISEGGVRSLLA 1032
Query: 374 VLD 376
LD
Sbjct: 1033YLD 1041
>TC217991
Length = 694
Score = 101 bits (252), Expect = 8e-22
Identities = 58/166 (34%), Positives = 101/166 (59%)
Frame = +3
Query: 407 LMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFMVEFVKFLNAKS 466
L+S G + +L + ++ G + Q+ A R+ +S + KK +G+AG + VK L AKS
Sbjct: 66 LVSLGLIPRLAHVLKSGSLGAQQAAAAAICRVC-SSTDMKKMVGEAGCIPLLVKMLEAKS 242
Query: 467 FEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTS 526
VRE+AA+A++ ++ V +NR+ +DD ++ L+QLLDP N+ KK+ ++ L SL+S
Sbjct: 243 NSVREVAAQAIASLMVVSQNRREVKKDDKSVPNLVQLLDPSPQNTA-KKYAVTCLGSLSS 419
Query: 527 CNSARKKIVSSGYAKNIDKLADAEVSCDAKKLVKKLSTNRFRSMLN 572
C +K ++S G + KL + ++ AKKL ++L +FRS+ +
Sbjct: 420 CKKCKKLMISYGAIGYLKKLTEMDIP-GAKKLHERLERGKFRSLFS 554
>BG315791 similar to PIR|B96639|B966 protein T1F9.16 [imported] - Arabidopsis
thaliana, partial (4%)
Length = 178
Score = 90.5 bits (223), Expect = 2e-18
Identities = 46/59 (77%), Positives = 50/59 (83%)
Frame = +2
Query: 428 QELALKVAFRLSGTSEEAKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMVTVPRN 486
QELALKVAF+ TSE+AKKA+GDAGFM E VKFLNAKSFEVREMAA+ L GMV VP N
Sbjct: 2 QELALKVAFKFCDTSEDAKKALGDAGFMAELVKFLNAKSFEVREMAAQPLLGMVFVPTN 178
>CO979270
Length = 837
Score = 88.6 bits (218), Expect = 7e-18
Identities = 64/234 (27%), Positives = 122/234 (51%), Gaps = 10/234 (4%)
Frame = -1
Query: 343 NSIGFIQNI--------AFGDELVRQMVIREGGIRALLRVLDPKWSYSSKTKEITMRAIE 394
N++G + N+ A G +R MV++EGG+ L W ++ + + + A+E
Sbjct: 819 NAVGCLSNLTNSGSSEEADGLLNLRVMVVKEGGVECLKNY----WDSGNQIQSLEV-AVE 655
Query: 395 SLCFTSSSSV--SILMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAKKAMGDA 452
L + S +L+ GFV +L+ + ++++ +A + + L S A+K MG+
Sbjct: 654 MLRHLAESDPIGEVLVGEGFVQRLVGVLNCEVLAVRIVAARAVYALGLNSGRARKEMGEL 475
Query: 453 GFMVEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSG 512
G ++ +K L+ K E +E +A ALS ++ P NR+ F +D+ + + LL+P
Sbjct: 474 GCVLGLIKMLDGKGVEEKEASAMALSVLLMHPANRRIFRKDERGVVSAVHLLNPSL-QGL 298
Query: 513 NKKFLISILMSLTSCNSARKKIVSSGYAKNIDKLADAEVSCDAKKLVKKLSTNR 566
+KK+ +S+L L S RK++V++G + KL + +V +KKL++ L +
Sbjct: 297 DKKYPVSLLALLVHSKSCRKQMVAAGACVHTQKLVEMDVP-GSKKLLESLGRGK 139
Score = 32.0 bits (71), Expect = 0.78
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = -1
Query: 190 VKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVL 249
++V+VV V + + N+++ E + +++ LA D VL+ G + L+ VL
Sbjct: 750 LRVMVVKEGGVECLKNYWDSGNQIQSLEVAVEMLRHLAESDPIGEVLVGEGFVQRLVGVL 571
Query: 250 DCGSELGKVAAARCLMKLTENSDNA 274
+C ++ AAR + L NS A
Sbjct: 570 NCEVLAVRIVAARAVYALGLNSGRA 496
>TC222425 weakly similar to UP|Q9FI58 (Q9FI58) Arabidopsis thaliana genomic
DNA, chromosome 5, TAC clone:K3K7, partial (23%)
Length = 410
Score = 63.5 bits (153), Expect = 2e-10
Identities = 38/122 (31%), Positives = 68/122 (55%)
Frame = +2
Query: 445 AKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLL 504
A+K MG+ G ++ +K L+ K E +E +A ALS ++ P NR+ F +D+ + + LL
Sbjct: 14 ARKEMGELGCVLGLIKMLDGKGVEEKEASAMALSVLLMHPANRRVFRKDERGVVSAVHLL 193
Query: 505 DPEEGNSGNKKFLISILMSLTSCNSARKKIVSSGYAKNIDKLADAEVSCDAKKLVKKLST 564
+P +KK+ +S+L L S RK++V++G KL + +V +KK ++ L
Sbjct: 194 NPSL-QGLDKKYPVSLLALLVHSKSCRKQMVAAGACVYTQKLVEMDVP-GSKKFLESLGR 367
Query: 565 NR 566
+
Sbjct: 368 GK 373
>BM526012
Length = 433
Score = 55.5 bits (132), Expect = 7e-08
Identities = 42/129 (32%), Positives = 66/129 (50%), Gaps = 2/129 (1%)
Frame = +1
Query: 68 SGENPSLSRLVTSIVATVKECHDLGQRCVDFSY-SGKLLMQSDLDVAFSKLDGLAKKLSE 126
S NP L+ SI T+ + L + C + +GKL QSDLD LD
Sbjct: 55 STSNPLSLHLLHSISQTLNDAVSLSKTCQPETLPNGKLKTQSDLDSLLVSLDRHVSDCDI 234
Query: 127 IYRTG-ILTNGFALVVSKPCLGACKEDMRFYVRDILTRMKIGELGMKKQALRNLLEVVVE 185
++R+G +L N ++ VSK +E +R R ++TR++IG K A+ +LL ++ E
Sbjct: 235 LFRSGLLLENSVSVSVSK------REAIRSESRSLITRLQIGSPESKASAMDSLLGLLQE 396
Query: 186 DEKYVKVIV 194
D+K V + V
Sbjct: 397 DDKNVTIAV 423
>TC209667 similar to GB|BAC22265.1|24414015|AP003803 arm repeat containing
protein homolog-like {Oryza sativa (japonica
cultivar-group);} , partial (41%)
Length = 787
Score = 53.1 bits (126), Expect = 3e-07
Identities = 47/190 (24%), Positives = 81/190 (41%)
Frame = +2
Query: 201 VHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAA 260
V L+ L + ++ +A + LA K + + G I PL+ +L GS+ GK A
Sbjct: 38 VKALIYVLKTGTETSKQNAACALMSLALVKENKSSIGACGAIPPLVALLLSGSQRGKKDA 217
Query: 261 ARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRNLVGVEEVKRFM 320
L KL N + G V L+ + + + A VL +L G+EE K +
Sbjct: 218 LTTLYKLCSVRQNKERAVSAGAVRPLVELVAEEG--SGMAEKAMVVLNSLAGIEEGKEAI 391
Query: 321 VEEDAVSTFIRLVKSKEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLRVLDPKWS 380
VEE + + ++ + ++ + + R +++REGGI L+ L S
Sbjct: 392 VEEGGIGALLEAIEDGSVKGKEFAVLTLVQLCAHSVANRALLVREGGIPPLV-ALSQNTS 568
Query: 381 YSSKTKEITM 390
+K K T+
Sbjct: 569 VRAKLKAETL 598
>TC230034
Length = 916
Score = 44.3 bits (103), Expect = 2e-04
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 20/199 (10%)
Frame = +1
Query: 157 VRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQ 216
+ ++ + L ++ +L LL + V +E+ IV D + LV L I+
Sbjct: 304 IEPLVLMLSSSNLDARQSSLLALLNLAVRNERNKVKIVTD--GAMPPLVELLKMQNSGIR 477
Query: 217 EESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMKLTENSDNAWA 276
E + + L+ S K ++ ++G L+++L GS GKV A L L+ + N+
Sbjct: 478 ELATAAILTLSAAASNKPIIAASGAAPLLVQILKSGSVQGKVDAVTALHNLSTSIANSIE 657
Query: 277 VSAHGGV--------------------TALLNICGNDDCKGDLVGPACGVLRNLVGVEEV 316
+ V TALL I N + + A G + LV E
Sbjct: 658 LLDASAVFPLLNLLKECKKYSKFAEKATALLEILSNSEEGRTAISIADGGILTLVETVED 837
Query: 317 KRFMVEEDAVSTFIRLVKS 335
+ E AV T + L +S
Sbjct: 838 GSLVSTEHAVGTLLSLCRS 894
Score = 28.9 bits (63), Expect = 6.6
Identities = 43/225 (19%), Positives = 90/225 (39%), Gaps = 2/225 (0%)
Frame = +1
Query: 210 SNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMKL-T 268
S ++E E K+V + + L +AGVI PL+ +L + + ++ L+ L
Sbjct: 208 SAKIEAAREIRKMVRKSSSSSKTRAKLAAAGVIEPLVLMLSSSNLDARQSSLLALLNLAV 387
Query: 269 ENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRNLVGVEEVKRFMVEEDAVST 328
N N + G + L+ + + + A + L K + A
Sbjct: 388 RNERNKVKIVTDGAMPPLVELLKMQN--SGIRELATAAILTLSAAASNKPIIAASGAAPL 561
Query: 329 FIRLVKSKEEAIQVNSIGFIQNIAFGDELVRQM-VIREGGIRALLRVLDPKWSYSSKTKE 387
++++KS +V+++ + N++ + + ++ + LL +L Y SK E
Sbjct: 562 LVQILKSGSVQGKVDAVTALHNLS--TSIANSIELLDASAVFPLLNLLKECKKY-SKFAE 732
Query: 388 ITMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELAL 432
+E L + +I ++ G + L+ V G + E A+
Sbjct: 733 KATALLEILSNSEEGRTAISIADGGILTLVETVEDGSLVSTEHAV 867
>TC210964 similar to UP|Q84TU4 (Q84TU4) Arm repeat-containing protein,
partial (22%)
Length = 608
Score = 44.3 bits (103), Expect = 2e-04
Identities = 31/127 (24%), Positives = 60/127 (46%)
Frame = +2
Query: 157 VRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQ 216
VR+++ ++ ++ +++A L ++ I + +++LV L S + IQ
Sbjct: 233 VRNLVEGLRSSDVDTQREATAELR--LLAKHNMDNRIAIANCGAINLLVDLLQSTDTTIQ 406
Query: 217 EESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMKLTENSDNAWA 276
E + + L+ D+ K + +AG I PLI VL+ GS K +A L L+ +N
Sbjct: 407 ENAVTALLNLSINDNNKTAIANAGAIEPLIHVLETGSPEAKENSAATLFSLSVIEENKIF 586
Query: 277 VSAHGGV 283
+ G +
Sbjct: 587 IGRSGAI 607
>TC227847 similar to UP|O22161 (O22161) F-box protein family, AtFBX5, partial
(43%)
Length = 1566
Score = 37.7 bits (86), Expect = 0.014
Identities = 29/127 (22%), Positives = 55/127 (42%)
Frame = +2
Query: 170 GMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGF 229
G++++A L + +D + + L + +QE +A + L+
Sbjct: 320 GVRQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQACANASPGLQERAAGALWGLSVS 499
Query: 230 DSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNI 289
++ + G +APLI + +E AA L L N+ NA + GGV+AL+++
Sbjct: 500 ETNSVAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNASNALRIVEEGGVSALVDL 679
Query: 290 CGNDDCK 296
C + K
Sbjct: 680 CSSSVSK 700
>TC216817 weakly similar to UP|KHLX_HUMAN (Q9Y2M5) Kelch-like protein X,
partial (5%)
Length = 1071
Score = 36.6 bits (83), Expect = 0.032
Identities = 36/130 (27%), Positives = 56/130 (42%), Gaps = 1/130 (0%)
Frame = +1
Query: 204 LVGFLGSNEVEIQEESAKVVCVLAGFDS-YKGVLISAGVIAPLIRVLDCGSELGKVAAAR 262
++G L S E Q E+A ++ A DS K ++ G + PLI +L + +A
Sbjct: 139 VIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVQPLIEMLQSPDVQLREMSAF 318
Query: 263 CLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRNLVGVEEVKRFMVE 322
L +L ++ N ++ +GG+ LL + D G L A L L
Sbjct: 319 ALGRLAQDPHNQAGIAHNGGLVPLLKLL--DSKNGSLQHNAAFALYGLAD---------N 465
Query: 323 EDAVSTFIRL 332
ED S FIR+
Sbjct: 466 EDNASDFIRV 495
Score = 35.8 bits (81), Expect = 0.054
Identities = 32/186 (17%), Positives = 73/186 (39%)
Frame = +1
Query: 325 AVSTFIRLVKSKEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLRVLDPKWSYSSK 384
A+ T I +++S++ + ++G I N+ +++ V+ G ++ ++ +L
Sbjct: 1 ALPTLILMLRSEDAGVHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLS-------- 156
Query: 385 TKEITMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEE 444
S C S ++L+ + + T +
Sbjct: 157 ----------SCCSESQREAALLLG---------------------------QFAATDSD 225
Query: 445 AKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLL 504
K + G + ++ L + ++REM+A AL + P N+ + + + LL+LL
Sbjct: 226 CKVHIVQRGAVQPLIEMLQSPDVQLREMSAFALGRLAQDPHNQAG-IAHNGGLVPLLKLL 402
Query: 505 DPEEGN 510
D + G+
Sbjct: 403 DSKNGS 420
Score = 34.3 bits (77), Expect = 0.16
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +1
Query: 201 VHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAA 260
V L+ L S +V+++E SA + LA + + G + PL+++LD + + A
Sbjct: 256 VQPLIEMLQSPDVQLREMSAFALGRLAQDPHNQAGIAHNGGLVPLLKLLDSKNGSLQHNA 435
Query: 261 ARCLMKLTENSDNAWAVSAHGGVTAL 286
A L L +N DNA GGV L
Sbjct: 436 AFALYGLADNEDNASDFIRVGGVQRL 513
Score = 28.9 bits (63), Expect = 6.6
Identities = 18/68 (26%), Positives = 37/68 (53%)
Frame = +1
Query: 160 ILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQEES 219
+L M++ E G +++ L + D++ ++I +D + +L+G LGS+ + Q +
Sbjct: 610 LLYLMRVSEKGCQRRVALALAHLCSSDDQ--RIIFIDHYGL-ELLIGLLGSSSSKQQLDG 780
Query: 220 AKVVCVLA 227
A +C LA
Sbjct: 781 AVALCKLA 804
>TC234733 similar to UP|Q9SNC6 (Q9SNC6) Arm repeat containing protein
homolog, partial (22%)
Length = 500
Score = 36.2 bits (82), Expect = 0.041
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +1
Query: 157 VRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQ 216
+ DI+ +K G + ++ A L + V DE V++ + + L+ L +
Sbjct: 25 IPDIVDVLKNGSMEARENAAATLFSLSVLDENKVQI---GAAGAIPALIKLLCEGTPRGK 195
Query: 217 EESAKVVCVLAGFDSYKGVLISAGVIAPLIRVL-DCGSELGKVAAARCLMKL 267
+++A + L+ + K + AG++APLI+ L D G G V A +M +
Sbjct: 196 KDAATAIFNLSIYQGNKARAVKAGIVAPLIQFLKDAGG--GMVDEALAIMAI 345
>TC216816 weakly similar to UP|KHLX_HUMAN (Q9Y2M5) Kelch-like protein X,
partial (5%)
Length = 1610
Score = 35.4 bits (80), Expect = 0.070
Identities = 59/270 (21%), Positives = 112/270 (40%), Gaps = 16/270 (5%)
Frame = +1
Query: 201 VHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAA 260
V L+ L S++V+++E SA + LA + + G + PL+++LD + + A
Sbjct: 76 VRPLIEMLQSSDVQLKEMSAFALGRLAQDTHNQAGIAHNGGLMPLLKLLDSKNGSLQHNA 255
Query: 261 ARCLMKLTENSDNAWAVSAHGGVTALLN----ICGNDDCKGDLVGPACGVLRNLVGVEEV 316
A L L +N DN GG+ L + + DC V + L +EE
Sbjct: 256 AFALYGLADNEDNVSDFIRVGGIQRLQDGEFIVQATKDC----------VAKTLKRLEE- 402
Query: 317 KRFMVEEDAVSTFIRLVKSKEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLRVLD 376
+ ++ + L++ E+A Q + ++ D+ R++ I G+ L+ +L
Sbjct: 403 ---KIHGRVLNHLLYLMRVSEKAFQRRVALTLAHLCSADD-QRKIFIDYNGLELLMGLLG 570
Query: 377 PKWSYSSKTKEITMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALK-VA 435
SY+ K + + +LC ++ ++++ V GE + + L V
Sbjct: 571 ---SYNPKQQ---LDGAVALCKLANKAMTLSPVDAAPPSPTPQVYLGEQYVNNVTLSDVT 732
Query: 436 FRLSG-----------TSEEAKKAMGDAGF 454
F + G S +A +AM D G+
Sbjct: 733 FLVEGKRFYAHRICLLASSDAFRAMFDGGY 822
Score = 33.1 bits (74), Expect = 0.35
Identities = 27/97 (27%), Positives = 42/97 (42%)
Frame = +1
Query: 236 LISAGVIAPLIRVLDCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDC 295
++ G + PLI +L K +A L +L +++ N ++ +GG+ LL + D
Sbjct: 58 IVQRGAVRPLIEMLQSSDVQLKEMSAFALGRLAQDTHNQAGIAHNGGLMPLLKLL--DSK 231
Query: 296 KGDLVGPACGVLRNLVGVEEVKRFMVEEDAVSTFIRL 332
G L A L L ED VS FIR+
Sbjct: 232 NGSLQHNAAFALYGLAD---------NEDNVSDFIRV 315
>TC216726 similar to UP|Q9SNC6 (Q9SNC6) Arm repeat containing protein
homolog, partial (35%)
Length = 1115
Score = 35.4 bits (80), Expect = 0.070
Identities = 22/75 (29%), Positives = 39/75 (51%), Gaps = 1/75 (1%)
Frame = +3
Query: 195 VDVSDVVHVLVGFLGSNEVEIQEESAKV-VCVLAGFDSYKGVLISAGVIAPLIRVLDCGS 253
+ S+ V VLV F+G+ +E +A V V + +G Y GV+ PL+ + G+
Sbjct: 447 IRASEAVPVLVEFIGNGSPRNKENAAAVLVHLCSGDQQYLAQAQELGVMGPLLELAQNGT 626
Query: 254 ELGKVAAARCLMKLT 268
+ GK A + L +++
Sbjct: 627 DRGKRKAGQLLERMS 671
>BU765405
Length = 421
Score = 34.3 bits (77), Expect = 0.16
Identities = 20/79 (25%), Positives = 42/79 (52%)
Frame = +1
Query: 149 CKEDMRFYVRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFL 208
C+ +RF V +++ +++ + AL LL + V+DEK K+ +V+ + + ++ FL
Sbjct: 175 CRRQLRFAVAPLVSMLRVDSSEFHEPALLALLNLAVQDEKN-KISIVE-AGALEPIISFL 348
Query: 209 GSNEVEIQEESAKVVCVLA 227
S +QE + + L+
Sbjct: 349 KSPNPNLQEYATASLLTLS 405
>TC204894 similar to UP|Q94KA9 (Q94KA9) Importin alpha 2, partial (95%)
Length = 2332
Score = 32.7 bits (73), Expect = 0.46
Identities = 35/122 (28%), Positives = 55/122 (44%), Gaps = 5/122 (4%)
Frame = +2
Query: 387 EITMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRL----SGTS 442
E T + + L S + ++ G V + + ++ + +L + A+ L SGTS
Sbjct: 437 EATTQFRKLLSIERSPPIEEVIQTGVVSRFVEFLMRED--FPQLQFEAAWALTNIASGTS 610
Query: 443 EEAKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMV-TVPRNRKRFVQDDHNIALLL 501
E K + D G + FVK L + S +VRE A AL + PR R + + LL
Sbjct: 611 ENTKVVI-DHGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALLPLLA 787
Query: 502 QL 503
QL
Sbjct: 788 QL 793
>TC221625 similar to UP|O82783 (O82783) Importin alpha 2 subunit (NLS
receptor), partial (62%)
Length = 988
Score = 31.6 bits (70), Expect = 1.0
Identities = 35/122 (28%), Positives = 55/122 (44%), Gaps = 5/122 (4%)
Frame = +3
Query: 387 EITMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRL----SGTS 442
E T + + L S + ++ G V + + ++ + +L + A+ L SGTS
Sbjct: 75 EATTQFRKLLSIERSPPIEEVIQAGVVPRFVDFLMRED--FPQLQFEAAWALTNIASGTS 248
Query: 443 EEAKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMV-TVPRNRKRFVQDDHNIALLL 501
E K + D G + FVK L + S +VRE A AL + PR R + + LL
Sbjct: 249 ENTKVII-DHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLA 425
Query: 502 QL 503
QL
Sbjct: 426 QL 431
>TC220934 similar to UP|Q7X9B2 (Q7X9B2) 9/13 hydroperoxide lyase, partial
(6%)
Length = 446
Score = 30.8 bits (68), Expect = 1.7
Identities = 19/66 (28%), Positives = 30/66 (44%)
Frame = +1
Query: 397 CFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFMV 456
C S +I+ SYG V L+ + + +E + RLS EE K +G G ++
Sbjct: 100 CLPPPSLAAIVRSYGAVKALVAALEKQTMMAKENTVCALVRLSKNKEEDKVMIGRVGAIL 279
Query: 457 EFVKFL 462
+K L
Sbjct: 280 HLLKLL 297
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.136 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,462,943
Number of Sequences: 63676
Number of extensions: 256188
Number of successful extensions: 1284
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of query: 577
length of database: 12,639,632
effective HSP length: 102
effective length of query: 475
effective length of database: 6,144,680
effective search space: 2918723000
effective search space used: 2918723000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146792.2