BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146790.2 + phase: 0
(255 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206297 UP|Q8GZD3 (Q8GZD3) Expansin, complete 488 e-139
TC206527 homologue to UP|Q84L80 (Q84L80) Expansin precursor, par... 347 2e-96
TC226245 homologue to UP|Q9FNT0 (Q9FNT0) Expansin, partial (92%) 344 2e-95
TC215588 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete 343 3e-95
TC226244 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (97%) 340 4e-94
TC215587 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete 339 6e-94
TC226247 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (93%) 337 4e-93
TC216737 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%) 332 8e-92
TC225355 homologue to UP|Q6T5H7 (Q6T5H7) Alpha-expansin 1, parti... 327 3e-90
TC225350 similar to UP|Q84UK4 (Q84UK4) Expansin, partial (95%) 324 3e-89
TC227656 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (89%) 318 1e-87
TC207122 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (87%) 318 2e-87
TC204261 similar to UP|Q84L76 (Q84L76) Expansin precursor, parti... 229 1e-83
TC230074 similar to UP|Q84L36 (Q84L36) Cell wall protein Exp1 pr... 217 7e-60
TC219719 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%) 218 3e-57
TC215589 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, parti... 211 3e-55
TC209520 homologue to UP|Q8GZD3 (Q8GZD3) Expansin, partial (42%) 202 1e-52
TC230075 similar to UP|Q6T5H6 (Q6T5H6) Alpha-expansin 2, partial... 201 3e-52
TC230679 similar to UP|EX13_ARATH (Q9M9P0) Alpha-expansin 13 pre... 185 2e-47
BM886535 similar to GP|29421118|db expansin {Vitis labrusca x Vi... 177 3e-45
>TC206297 UP|Q8GZD3 (Q8GZD3) Expansin, complete
Length = 1262
Score = 488 bits (1257), Expect = e-139
Identities = 221/255 (86%), Positives = 239/255 (93%)
Frame = +1
Query: 1 MTKVMFILGTLIGLCCFTINSYAFKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQGY 60
M K+M +LG+LIGLCCFTI +YAF SGWTNAHATFYGGSDA GTMGGACGYGNLY+ GY
Sbjct: 220 MGKIMLVLGSLIGLCCFTITTYAFSPSGWTNAHATFYGGSDASGTMGGACGYGNLYATGY 399
Query: 61 GTRTAALSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDDG 120
GTRTAALSTALFNDGASCGQCYKIICDYK+D RWCIKGRS+T+TATNFCPPNF LPN++G
Sbjct: 400 GTRTAALSTALFNDGASCGQCYKIICDYKSDSRWCIKGRSVTVTATNFCPPNFALPNNNG 579
Query: 121 GWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISN 180
GWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISN
Sbjct: 580 GWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISN 759
Query: 181 LAGAGSIQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVP 240
+ GAGSIQSV IKGSKT WMAMSRNWG+NWQSNAYLNGQS+SF+VTTTDG TR FQDIVP
Sbjct: 760 VGGAGSIQSVFIKGSKTGWMAMSRNWGSNWQSNAYLNGQSLSFRVTTTDGETRVFQDIVP 939
Query: 241 SNWGFGQSFSSKIQF 255
++W FGQ+FSS +QF
Sbjct: 940 ASWTFGQTFSSPVQF 984
>TC206527 homologue to UP|Q84L80 (Q84L80) Expansin precursor, partial (96%)
Length = 1150
Score = 347 bits (891), Expect = 2e-96
Identities = 160/243 (65%), Positives = 192/243 (78%)
Frame = +2
Query: 7 ILGTLIGLCCFTINSYAFKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAA 66
+L L+ LC +YA GW HATFYGG DA GTMGGACGYGNLYSQGYGT TAA
Sbjct: 95 LLFFLLNLCLR--GTYADYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 268
Query: 67 LSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDDGGWCNPP 126
LSTALFN+G SCG CY++ CD TDP+WC+ G SI +TATNFCPPNF L N++GGWCNPP
Sbjct: 269 LSTALFNNGMSCGSCYEMKCD--TDPKWCLPG-SIIVTATNFCPPNFALANNNGGWCNPP 439
Query: 127 LKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGS 186
L+HFD+A+PA+ +I Y+ GIVPV F+RV C K GG+RF++NG YF LVLI+N+ GAG
Sbjct: 440 LQHFDLAEPAFLQIAQYKAGIVPVSFRRVSCVKKGGIRFTINGHSYFNLVLITNVGGAGD 619
Query: 187 IQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFG 246
+ SVSIKGS+T W MSRNWG NWQSN+YLNGQS+SF+VTT+DG T T +IVP+NW FG
Sbjct: 620 VHSVSIKGSRTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTLTSNNIVPANWQFG 799
Query: 247 QSF 249
Q+F
Sbjct: 800 QTF 808
>TC226245 homologue to UP|Q9FNT0 (Q9FNT0) Expansin, partial (92%)
Length = 1220
Score = 344 bits (883), Expect = 2e-95
Identities = 162/244 (66%), Positives = 191/244 (77%), Gaps = 2/244 (0%)
Frame = +3
Query: 8 LGTLIGLCCFTINSYAFKAS--GWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTA 65
L TLI + +N+ A W +AHATFYGG DA GTMGGACGYGNLYSQGYGT T
Sbjct: 87 LVTLIVVLFVNMNNQGATADYGSWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTDTV 266
Query: 66 ALSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDDGGWCNP 125
ALSTALFN+G SCG CY++ CD DPRWC G SIT+TATNFCPPN LPN++GGWCNP
Sbjct: 267 ALSTALFNNGLSCGSCYEMRCD--DDPRWCKPG-SITVTATNFCPPNPSLPNNNGGWCNP 437
Query: 126 PLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAG 185
PL+HFDMA+PA+ +I YR GIVPV F+RVPC K GG+RF++NG YF LVLI+N+ GAG
Sbjct: 438 PLQHFDMAEPAFLQIAEYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAG 617
Query: 186 SIQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGF 245
+ SVSIKGSKT W MSRNWG NWQSN+YLNGQS+SF+VTT+DG T T ++ P+NW F
Sbjct: 618 DVNSVSIKGSKTGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVTSFNVAPANWQF 797
Query: 246 GQSF 249
GQ+F
Sbjct: 798 GQTF 809
>TC215588 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete
Length = 1539
Score = 343 bits (881), Expect = 3e-95
Identities = 158/251 (62%), Positives = 197/251 (77%), Gaps = 1/251 (0%)
Frame = +2
Query: 1 MTKVMFILGTLI-GLCCFTINSYAFKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQG 59
++K M ++G L+ G +++A+ GWTNAHATFYGGSDA GTMGGACGYGNLYSQG
Sbjct: 29 LSKKMALIGLLLMGFLTMFSSAHAY-GGGWTNAHATFYGGSDASGTMGGACGYGNLYSQG 205
Query: 60 YGTRTAALSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDD 119
YGT TAALSTALFN+G SCG CY+I C D RWC+ G SI +TATNFCPPN LPN++
Sbjct: 206 YGTNTAALSTALFNNGLSCGSCYEIRC--ANDHRWCLPG-SIVVTATNFCPPNNALPNNN 376
Query: 120 GGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLIS 179
GGWCNPPL+HFD+AQP + +I Y+ GIVPV ++RV C++ GG+RF++NG YF LVLI+
Sbjct: 377 GGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVSYRRVACRRKGGIRFTINGHSYFNLVLIT 556
Query: 180 NLAGAGSIQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIV 239
N+ GAG + SVSIKGS+T WM MSRNWG NWQSN YL+GQS+SFKVTT+DG T ++
Sbjct: 557 NVGGAGDVHSVSIKGSRTGWMPMSRNWGQNWQSNNYLDGQSLSFKVTTSDGRTIVSNNVA 736
Query: 240 PSNWGFGQSFS 250
PS W FGQ+++
Sbjct: 737 PSGWSFGQTYT 769
>TC226244 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (97%)
Length = 821
Score = 340 bits (872), Expect = 4e-94
Identities = 155/221 (70%), Positives = 181/221 (81%)
Frame = +3
Query: 28 GWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAALSTALFNDGASCGQCYKIICD 87
GW +AHATFYGG DA GTMGGACGYGNLYSQGYGT T ALSTALFN+G SCG CY++ CD
Sbjct: 168 GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTDTVALSTALFNNGLSCGSCYEMRCD 347
Query: 88 YKTDPRWCIKGRSITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGIYRGGI 147
DPRWC G SIT+TATNFCPPN LPN++GGWCNPPL+HFDMA+PA+ +I YR GI
Sbjct: 348 --DDPRWCKPG-SITVTATNFCPPNPSLPNNNGGWCNPPLQHFDMAEPAFLQIAEYRAGI 518
Query: 148 VPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGSKTDWMAMSRNWG 207
VPV F+RVPC K GG+RF++NG YF LVLI+N+AGAG + S+SIKGSKT W MSRNWG
Sbjct: 519 VPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVNSLSIKGSKTGWQPMSRNWG 698
Query: 208 ANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQS 248
NWQSN+YLNGQS+S +VTT+DG T T ++ P NW FGQ+
Sbjct: 699 QNWQSNSYLNGQSLSLQVTTSDGRTVTSFNVAPVNWRFGQT 821
>TC215587 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete
Length = 1394
Score = 339 bits (870), Expect = 6e-94
Identities = 153/241 (63%), Positives = 187/241 (77%), Gaps = 1/241 (0%)
Frame = +3
Query: 11 LIGLCCFTINSYAFK-ASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAALST 69
L+GL ++Y + GW NAHATFYGGSDA GTMGGACGYGNLYSQGYGT TAALST
Sbjct: 69 LVGLLSMFSSAYGYGYGGGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALST 248
Query: 70 ALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDDGGWCNPPLKH 129
ALFN+G SCG CY+I C D RWC+ G SI +TATNFCPPN LPN+ GGWCNPP+ H
Sbjct: 249 ALFNNGLSCGSCYEIRC--VNDHRWCLPG-SIMVTATNFCPPNNALPNNAGGWCNPPMHH 419
Query: 130 FDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQS 189
FD++QP + +I YR GIVPV ++RVPC++ GG+RF++NG YF LVLI+N+ GAG +
Sbjct: 420 FDLSQPVFLRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHG 599
Query: 190 VSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQSF 249
V+IKGS+T WM MSRNWG NWQSN YLNGQS+SFKVTT+DG T ++ P+ W FGQ++
Sbjct: 600 VAIKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTAVSYNVAPAGWSFGQTY 779
Query: 250 S 250
+
Sbjct: 780 T 782
>TC226247 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (93%)
Length = 1376
Score = 337 bits (863), Expect = 4e-93
Identities = 152/222 (68%), Positives = 180/222 (80%)
Frame = +3
Query: 28 GWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAALSTALFNDGASCGQCYKIICD 87
GW HATFYGG DA GTMG ACGYGNLYSQGYGT TAALSTALFN+G SCG CY++ CD
Sbjct: 144 GWQGGHATFYGGGDASGTMGSACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEMKCD 323
Query: 88 YKTDPRWCIKGRSITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGIYRGGI 147
DPRWC G +I +TATNFCPPNF L N++GGWCNPPL+HFDMA+PA+ +I YR GI
Sbjct: 324 --DDPRWCKPG-TIIVTATNFCPPNFALANNNGGWCNPPLQHFDMAEPAFLQIAQYRAGI 494
Query: 148 VPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGSKTDWMAMSRNWG 207
VPV F+RVPC K GG+RF++NG YF LVLI+N+AGAG + +VSIKGS+T W MSRNWG
Sbjct: 495 VPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVHAVSIKGSRTSWQPMSRNWG 674
Query: 208 ANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQSF 249
NWQSN+YLNGQS+SF+VT +DG T T ++ PS+W FGQ+F
Sbjct: 675 QNWQSNSYLNGQSLSFQVTASDGRTVTSFNVAPSDWQFGQTF 800
>TC216737 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%)
Length = 1296
Score = 332 bits (852), Expect = 8e-92
Identities = 160/256 (62%), Positives = 191/256 (74%), Gaps = 4/256 (1%)
Frame = +1
Query: 1 MTKVMFI-LGTLIGLCCFTINSY--AFKASGWTNAHATFYGGSDAEGTMGGACGYGNLYS 57
M ++FI + +L+ L T + W +AHATFYGGSDA GTMGGACGYGNLYS
Sbjct: 46 MAAIVFIHIASLVSLFVATSARIPGVYTGGPWQSAHATFYGGSDASGTMGGACGYGNLYS 225
Query: 58 QGYGTRTAALSTALFNDGASCGQCYKIICDYKTDPRWCIKGR-SITITATNFCPPNFDLP 116
QGYG TAALSTALFN+G SCG C++I CD DPRWC G SI ITATNFCPPNF LP
Sbjct: 226 QGYGVNTAALSTALFNNGLSCGACFEIKCDQ--DPRWCNPGNPSILITATNFCPPNFALP 399
Query: 117 NDDGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELV 176
ND+GGWCNPP HFD+A P + KI YR GIVPV ++RVPC+K GG+RF++NG YF LV
Sbjct: 400 NDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVAYRRVPCRKAGGIRFTINGFRYFNLV 579
Query: 177 LISNLAGAGSIQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQ 236
LI+N+AGAG I VS+KGSKT WM+MSRNWG NWQSNA L GQ++SF+VT +D T T
Sbjct: 580 LITNVAGAGDIVRVSVKGSKTAWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 759
Query: 237 DIVPSNWGFGQSFSSK 252
++ P NW FGQ+F+ K
Sbjct: 760 NVAPPNWQFGQTFTGK 807
>TC225355 homologue to UP|Q6T5H7 (Q6T5H7) Alpha-expansin 1, partial (90%)
Length = 977
Score = 327 bits (838), Expect = 3e-90
Identities = 152/230 (66%), Positives = 176/230 (76%), Gaps = 1/230 (0%)
Frame = +1
Query: 24 FKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAALSTALFNDGASCGQCYK 83
+ W NAHATFYGGSDA GTMGGACGYGNLYSQGYG TAALSTALFN G SCG C++
Sbjct: 31 YSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFE 210
Query: 84 IICDYKTDPRWCIKGR-SITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGI 142
I C D +WC G SI ITATNFCPPN+ LPND+GGWCNPP HFD+A P + KI
Sbjct: 211 IKC--ANDKQWCHSGSPSIFITATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAE 384
Query: 143 YRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGSKTDWMAM 202
YR GIVPV F+RV C+KHGG+RF++NG YF LVLISN+AGAG I +KGS+T WM M
Sbjct: 385 YRAGIVPVAFRRVACRKHGGIRFTINGFRYFNLVLISNVAGAGDIVHAYVKGSRTGWMPM 564
Query: 203 SRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQSFSSK 252
SRNWG NWQSNA L GQ++SF+VT +D + T +IVPSNW FGQ+F+ K
Sbjct: 565 SRNWGQNWQSNAVLVGQALSFRVTASDRRSSTSWNIVPSNWQFGQTFTGK 714
>TC225350 similar to UP|Q84UK4 (Q84UK4) Expansin, partial (95%)
Length = 1184
Score = 324 bits (830), Expect = 3e-89
Identities = 150/230 (65%), Positives = 175/230 (75%), Gaps = 1/230 (0%)
Frame = +3
Query: 24 FKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAALSTALFNDGASCGQCYK 83
+ W +AHATFYGGSDA GTMGGACGYGNLYSQGYG TAALSTALFN G SCG C++
Sbjct: 102 YSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFE 281
Query: 84 IICDYKTDPRWCIKGR-SITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGI 142
I C D +WC G SI ITATNFCPPNF LPND+GGWCNPP HFD+A P + KI
Sbjct: 282 IKC--ANDRQWCHSGSPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAE 455
Query: 143 YRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGSKTDWMAM 202
YR GIVPV ++RVPC+KHGG+RF+VNG YF LVL+SN+AGAG I +KG++T WM M
Sbjct: 456 YRAGIVPVAYRRVPCRKHGGIRFTVNGFRYFNLVLVSNVAGAGDIVRTYVKGTRTGWMPM 635
Query: 203 SRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQSFSSK 252
SRNWG NWQSNA L GQ++SF+VT +D T T +I P NW FGQ+F+ K
Sbjct: 636 SRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNIAPPNWQFGQTFTGK 785
>TC227656 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (89%)
Length = 1518
Score = 318 bits (816), Expect = 1e-87
Identities = 144/252 (57%), Positives = 188/252 (74%)
Frame = +3
Query: 1 MTKVMFILGTLIGLCCFTINSYAFKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQGY 60
+++ M +LG L+GL + + GWTNAHATFYGG DA GTMGGACGYGNLYSQGY
Sbjct: 102 LSRKMALLGFLLGLFYMISHVKGYGFGGWTNAHATFYGGGDASGTMGGACGYGNLYSQGY 281
Query: 61 GTRTAALSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDDG 120
GT T ALSTALFN+G SCG C++I C DP+WC+ G SI +TATNFCPP G
Sbjct: 282 GTDTTALSTALFNNGLSCGACFQIKC--ANDPQWCLPG-SIIVTATNFCPP--------G 428
Query: 121 GWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISN 180
GWC+PP HFD++QP ++ I YR GIVPV+++RV C++ GG+RF++NG YF LVL++N
Sbjct: 429 GWCDPPNHHFDLSQPVFQHIAQYRAGIVPVVYRRVRCRRKGGIRFTINGHSYFNLVLVTN 608
Query: 181 LAGAGSIQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVP 240
+ GAG + +VSIKGS+T W AMSRNWG NWQSN+YLNGQS+SF VTT++G + ++ P
Sbjct: 609 VGGAGDVHAVSIKGSRTRWQAMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAP 788
Query: 241 SNWGFGQSFSSK 252
+ W FGQ+++ +
Sbjct: 789 AGWSFGQTYTGR 824
>TC207122 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (87%)
Length = 1348
Score = 318 bits (814), Expect = 2e-87
Identities = 149/253 (58%), Positives = 188/253 (73%), Gaps = 3/253 (1%)
Frame = +1
Query: 3 KVMFILGTLIGLCCFTINSYA---FKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQG 59
K M LG + L C ++ SYA GWTNAHATFYGGSDA GTMGGACGYGNLYSQG
Sbjct: 82 KKMVHLGFFL-LGCLSMISYANGYVSNGGWTNAHATFYGGSDASGTMGGACGYGNLYSQG 258
Query: 60 YGTRTAALSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDD 119
YGT TAALSTALFN+G SCG CY+I C DP+WC++G +I +TATNFCPP
Sbjct: 259 YGTNTAALSTALFNNGLSCGSCYQIKC--ANDPQWCLRG-TIVVTATNFCPP-------- 405
Query: 120 GGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLIS 179
GGWC+PP HFD++QP +++I YR GIVPV+++RV C + GG+RF++NG YF LVL++
Sbjct: 406 GGWCDPPNHHFDLSQPVFQQIAQYRAGIVPVVYRRVRCMRRGGIRFTINGHSYFNLVLVT 585
Query: 180 NLAGAGSIQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIV 239
N+ GAG + SV+IKGS+T W MSRNWG NWQSN+YLNGQS+SF VTT+DG + +
Sbjct: 586 NVGGAGDVHSVAIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFLVTTSDGRSVLSYNAA 765
Query: 240 PSNWGFGQSFSSK 252
P +W FGQ+++ +
Sbjct: 766 PPSWSFGQTYTGR 804
>TC204261 similar to UP|Q84L76 (Q84L76) Expansin precursor, partial (87%)
Length = 965
Score = 229 bits (583), Expect(2) = 1e-83
Identities = 106/153 (69%), Positives = 121/153 (78%), Gaps = 1/153 (0%)
Frame = +2
Query: 32 AHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAALSTALFNDGASCGQCYKIICDYKTD 91
AHATFYGG+DA GTMGGACGYGNLYSQGYG TAALSTALFN+G SCG C++I CD D
Sbjct: 2 AHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQ--D 175
Query: 92 PRWCIKGR-SITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPV 150
PRWC G SI ITATNFCPPNF LP+D+GGWCNPP HFD+A P + KI Y+ GIVPV
Sbjct: 176 PRWCNPGSPSIVITATNFCPPNFALPSDNGGWCNPPRPHFDLAMPMFLKIAQYKAGIVPV 355
Query: 151 LFQRVPCKKHGGVRFSVNGRDYFELVLISNLAG 183
++RVPC+K GG+RF++NG YF LVLI G
Sbjct: 356 SYRRVPCRKVGGIRFTINGFRYFNLVLIHQRGG 454
Score = 98.6 bits (244), Expect(2) = 1e-83
Identities = 44/74 (59%), Positives = 58/74 (77%)
Frame = +3
Query: 179 SNLAGAGSIQSVSIKGSKTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDI 238
+N+AGAG I VS+KGSKT W +MSRNWG NWQSNA L GQ++SF+VT +D T T +++
Sbjct: 441 TNVAGAGDIARVSVKGSKTGWNSMSRNWGQNWQSNANLVGQALSFRVTGSDRRTSTSRNV 620
Query: 239 VPSNWGFGQSFSSK 252
PS+W FGQ+F+ K
Sbjct: 621 APSHWKFGQTFTGK 662
>TC230074 similar to UP|Q84L36 (Q84L36) Cell wall protein Exp1 precursor,
partial (57%)
Length = 672
Score = 217 bits (553), Expect(2) = 7e-60
Identities = 99/155 (63%), Positives = 120/155 (76%), Gaps = 1/155 (0%)
Frame = +2
Query: 28 GWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAALSTALFNDGASCGQCYKIICD 87
GWT AHATFYGG+DA GTMGGACGYGNLY QGYGT TAALS ALFN+G +CG C++++C
Sbjct: 98 GWTAAHATFYGGADASGTMGGACGYGNLYQQGYGTSTAALSAALFNNGQTCGACFQLVC- 274
Query: 88 YKTDPRWCIKGRS-ITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGIYRGG 146
+ +CI+G ITITATNFCP N + GWCNPPL HFDM+QPA+ KI +YR G
Sbjct: 275 --YNSPFCIRGAGPITITATNFCPRNGSFSANGIGWCNPPLMHFDMSQPAFTKIALYRAG 448
Query: 147 IVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNL 181
+VPVLF+RV C K GG+RF++NG YF LVL+ N+
Sbjct: 449 VVPVLFRRVVCLKRGGIRFTINGNPYFNLVLVYNV 553
Score = 30.8 bits (68), Expect(2) = 7e-60
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = +3
Query: 183 GAGSIQSVSIKGSKTDWMAMSRNWGANWQS 212
G G +++VSIKGS T + GA WQ+
Sbjct: 558 GLGDVKAVSIKGSSTGLATNDQKLGAKWQN 647
>TC219719 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%)
Length = 1007
Score = 218 bits (554), Expect = 3e-57
Identities = 99/137 (72%), Positives = 111/137 (80%), Gaps = 1/137 (0%)
Frame = +1
Query: 29 WTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRTAALSTALFNDGASCGQCYKIICDY 88
W +AHATFYGGSDA GTMGGACGYGNLYSQGYG TAALSTALFN+G SCG C++I CD
Sbjct: 136 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCD- 312
Query: 89 KTDPRWCIKGR-SITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGIYRGGI 147
DPRWC G SI ITATNFCPPNF LPND+GGWCNPP HFD+A P + KI YR GI
Sbjct: 313 -QDPRWCNPGSPSILITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAQYRAGI 489
Query: 148 VPVLFQRVPCKKHGGVR 164
VPV ++RVPC+K GG++
Sbjct: 490 VPVAYRRVPCRKTGGIK 540
Score = 121 bits (304), Expect = 3e-28
Identities = 58/104 (55%), Positives = 74/104 (70%)
Frame = +2
Query: 149 PVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGSKTDWMAMSRNWGA 208
P L ++ G RF++NG YF LVLI+N+AGAG I VS+KGSKT WM+MSRNWG
Sbjct: 494 PSLTAGCHAERQGASRFTINGFRYFNLVLITNVAGAGDIVRVSMKGSKTAWMSMSRNWGQ 673
Query: 209 NWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQSFSSK 252
NWQSNA L GQ++SF+VT +D T T ++ P NW FGQ+F+ K
Sbjct: 674 NWQSNAVLVGQALSFRVTGSDQRTSTSWNVAPPNWQFGQTFTGK 805
>TC215589 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, partial (60%)
Length = 495
Score = 211 bits (536), Expect = 3e-55
Identities = 100/151 (66%), Positives = 114/151 (75%)
Frame = +2
Query: 5 MFILGTLIGLCCFTINSYAFKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTRT 64
M + G L+ +S GWTNAHATFYGGSDA GTMGGACGYGNLYSQGYGT T
Sbjct: 47 MALTGLLLLAFLTMFSSAHAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT 226
Query: 65 AALSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDDGGWCN 124
AALSTALFN+G SCG CY+I C D RWC+ G SI +TATNFCPPN LPND+GGWCN
Sbjct: 227 AALSTALFNNGLSCGSCYEIRC--ANDHRWCLPG-SIVVTATNFCPPNNALPNDNGGWCN 397
Query: 125 PPLKHFDMAQPAWEKIGIYRGGIVPVLFQRV 155
PPL+HFD+AQP + +I Y+ GIVPV F+RV
Sbjct: 398 PPLQHFDLAQPVFLRIAQYKAGIVPVSFRRV 490
>TC209520 homologue to UP|Q8GZD3 (Q8GZD3) Expansin, partial (42%)
Length = 638
Score = 202 bits (514), Expect = 1e-52
Identities = 95/111 (85%), Positives = 103/111 (92%)
Frame = +3
Query: 145 GGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGSKTDWMAMSR 204
G VPVLFQRVPCKKHGGVRFSVNGRDYFELVLISN+ GAGSIQSVSIKGSKT WMAMSR
Sbjct: 6 GTSVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNVGGAGSIQSVSIKGSKTGWMAMSR 185
Query: 205 NWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQSFSSKIQF 255
NWG+NWQSNAYLNGQS+SF+VTTTDG TR FQDIVP++W FGQ+FSS +QF
Sbjct: 186 NWGSNWQSNAYLNGQSLSFRVTTTDGETRVFQDIVPASWTFGQTFSSPVQF 338
>TC230075 similar to UP|Q6T5H6 (Q6T5H6) Alpha-expansin 2, partial (54%)
Length = 638
Score = 201 bits (511), Expect = 3e-52
Identities = 91/174 (52%), Positives = 119/174 (68%), Gaps = 1/174 (0%)
Frame = +1
Query: 77 SCGQCYKIICDYKTDPRWCIKGRSITIT-ATNFCPPNFDLPNDDGGWCNPPLKHFDMAQP 135
+CG C+ +C + +CI+G ATNFCP N + GWCNPPL HFDM+QP
Sbjct: 4 TCGACFXXVC---YNSPFCIRGXXXXXXXATNFCPRNGXFSANGIGWCNPPLMHFDMSQP 174
Query: 136 AWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGS 195
A+ KI +YR G+VPVLF+RV C K GG+RF++NG YF LVL+ N+ G G +++VSIKGS
Sbjct: 175 AFTKIALYRAGVVPVLFRRVVCLKRGGIRFTINGNPYFNLVLVYNVGGLGDVKAVSIKGS 354
Query: 196 KTDWMAMSRNWGANWQSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQSF 249
T W M+RNWG NWQS Y GQS+SF VTT+DG + ++VP+ W FGQ+F
Sbjct: 355 STGWQPMTRNWGQNWQSKTYFVGQSLSFIVTTSDGRSVVSSNVVPAGWKFGQTF 516
>TC230679 similar to UP|EX13_ARATH (Q9M9P0) Alpha-expansin 13 precursor
(At-EXP13) (AtEx13) (Ath-ExpAlpha-1.22), partial (62%)
Length = 780
Score = 185 bits (469), Expect = 2e-47
Identities = 83/162 (51%), Positives = 108/162 (66%)
Frame = +1
Query: 91 DPRWCIKGRSITITATNFCPPNFDLPNDDGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPV 150
D RWCI G I +TATNFC PN+ D GG CNPP KHF + A+EKI I++ G +PV
Sbjct: 1 DMRWCIPGXXIIVTATNFCAPNYGFXXDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPV 180
Query: 151 LFQRVPCKKHGGVRFSVNGRDYFELVLISNLAGAGSIQSVSIKGSKTDWMAMSRNWGANW 210
++R+ C+K GG+RF+V G F VLISN+AG G I V +KGS+T W++M RNWG NW
Sbjct: 181 QYRRIKCRKEGGMRFTVTGSGIFISVLISNVAGHGDIGEVKVKGSRTGWLSMGRNWGQNW 360
Query: 211 QSNAYLNGQSMSFKVTTTDGVTRTFQDIVPSNWGFGQSFSSK 252
NA L Q +SF+V +DG T T ++ P +W FGQ+F K
Sbjct: 361 HVNALLQNQPLSFEVKASDGKTVTSYNVAPKDWTFGQTFEGK 486
>BM886535 similar to GP|29421118|db expansin {Vitis labrusca x Vitis
vinifera}, partial (48%)
Length = 437
Score = 177 bits (450), Expect = 3e-45
Identities = 84/131 (64%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
Frame = +3
Query: 5 MFILGTL-IGLCCFTINSYAFKASGWTNAHATFYGGSDAEGTMGGACGYGNLYSQGYGTR 63
M +LG L +G +S + GW +AHATFYGG DA GTMGGACGYGNLYSQGYGT
Sbjct: 54 MVLLGLLLVGFLSQLGSSVSASGYGWMDAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 233
Query: 64 TAALSTALFNDGASCGQCYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPNDDGGWC 123
TAALSTALFN+G SCG C++I C D RWC+ RS+ +TATNFCPPN LPN+ GGWC
Sbjct: 234 TAALSTALFNNGLSCGACFEIRC--VNDQRWCLP-RSVIVTATNFCPPNNALPNNAGGWC 404
Query: 124 NPPLKHFDMAQ 134
NPPL HFD++Q
Sbjct: 405 NPPLHHFDLSQ 437
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.137 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,487,238
Number of Sequences: 63676
Number of extensions: 208193
Number of successful extensions: 1115
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of query: 255
length of database: 12,639,632
effective HSP length: 95
effective length of query: 160
effective length of database: 6,590,412
effective search space: 1054465920
effective search space used: 1054465920
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146790.2