BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146785.9 + phase: 0
(514 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC205045 similar to UP|P93166 (P93166) SCOF-1, partial (45%) 59 4e-09
BI945002 similar to PIR|T52382|T523 zinc finger protein ZPT4-4 ... 59 7e-09
TC205046 similar to UP|P93166 (P93166) SCOF-1, partial (43%) 56 3e-08
TC203295 similar to UP|P93166 (P93166) SCOF-1, partial (52%) 55 8e-08
TC221557 similar to UP|Q43614 (Q43614) DNA-binding protein, part... 55 8e-08
TC203387 similar to UP|Q9XEU0 (Q9XEU0) Zinc-finger protein 1, pa... 55 8e-08
TC216904 UP|P93166 (P93166) SCOF-1, complete 54 1e-07
TC220446 similar to UP|O22083 (O22083) ZPT2-11, partial (24%) 54 2e-07
CD409939 similar to PIR|S19159|S191 finger protein EPF1 - garden... 53 3e-07
TC209064 similar to UP|P93166 (P93166) SCOF-1, partial (93%) 53 4e-07
TC234818 similar to UP|O22082 (O22082) C2H2 zinc-finger protein ... 49 5e-06
TC230715 similar to UP|Q39217 (Q39217) Zinc finger protein, part... 48 9e-06
TC233289 48 9e-06
AW349557 48 1e-05
AW164352 similar to GP|1786142|dbj| PEThy;ZPT4-1 {Petunia x hybr... 47 2e-05
BM093731 similar to GP|2346978|dbj| ZPT2-14 {Petunia x hybrida},... 42 7e-04
CO981629 41 0.001
TC203979 similar to UP|O22086 (O22086) ZPT2-14, partial (39%) 41 0.001
TC203987 similar to UP|O22084 (O22084) ZPT2-12, partial (37%) 40 0.003
TC209563 similar to UP|O22084 (O22084) ZPT2-12, partial (45%) 39 0.004
>TC205045 similar to UP|P93166 (P93166) SCOF-1, partial (45%)
Length = 1150
Score = 59.3 bits (142), Expect = 4e-09
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = +2
Query: 382 SYSEDSAYESDENSSESDSYPAPKAQSNKNMNGKTNKKSSYKGKKKMKSKKSKEHECPIC 441
SY +++ + S+S P + N + +S G +M HEC IC
Sbjct: 413 SYQALGGHKASHRKASSESNPTASVSALAN----DSVSASTVGGGRM-------HECSIC 559
Query: 442 NKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHA-APAAHAHAAPAPPAFAAAAN 500
+K F +GQALGGHKR H+ GGN+ H+++ A ++ A AA+++
Sbjct: 560 HKSFPTGQALGGHKRCHYDGGNN------------HSNSNANGNNSSGATTSDGGAASSS 703
Query: 501 PSL--FDLNLPAP 511
+L FDLNLPAP
Sbjct: 704 HTLRGFDLNLPAP 742
Score = 45.1 bits (105), Expect = 8e-05
Identities = 27/74 (36%), Positives = 33/74 (44%)
Frame = +2
Query: 413 NGKTNKKSSYKGKKKMKSKKSKEHECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRP 472
N T SS K+ H C +CNK F S QALGGHK SH ++ N P
Sbjct: 311 NNNTQLPSSSLSDKEASPPVKLTHRCTVCNKAFGSYQALGGHKASHRKASSESN-----P 475
Query: 473 AAAAHAHAAPAAHA 486
A+ A A + A
Sbjct: 476 TASVSALANDSVSA 517
Score = 33.9 bits (76), Expect = 0.18
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Frame = +2
Query: 90 TRFVHSN-------------AAATVQMEKFCKECGKGFPSLKALCGHMACHSEKDKGANR 136
TR +H+N A+ V++ C C K F S +AL GH A H + +N
Sbjct: 296 TRNIHNNNTQLPSSSLSDKEASPPVKLTHRCTVCNKAFGSYQALGGHKASHRKASSESNP 475
Query: 137 IESVSGV 143
SVS +
Sbjct: 476 TASVSAL 496
Score = 30.0 bits (66), Expect = 2.6
Identities = 33/134 (24%), Positives = 43/134 (31%)
Frame = +2
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENSLQSNEEKRMNANASVNAMFKFDEGRKRKRLDLG 65
C C K F ++LGGH +H + + AN SV+A
Sbjct: 386 CTVCNKAFGSYQALGGHKASHRKASSESNPTASVSALANDSVSA---------------S 520
Query: 66 SNGGGSGGDDGNLIYGLRENPKKTTRFVHSNAAATVQMEKFCKECGKGFPSLKALCGHMA 125
+ GGG +H C C K FP+ +AL GH
Sbjct: 521 TVGGGR---------------------MHE-----------CSICHKSFPTGQALGGHKR 604
Query: 126 CHSEKDKGANRIES 139
CH D G N S
Sbjct: 605 CH--YDGGNNHSNS 640
>BI945002 similar to PIR|T52382|T523 zinc finger protein ZPT4-4 C2H2-type
[imported] - garden petunia, partial (8%)
Length = 389
Score = 58.5 bits (140), Expect = 7e-09
Identities = 33/81 (40%), Positives = 38/81 (46%)
Frame = +1
Query: 434 KEHECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPAPP 493
K HEC IC KIF SGQALGGHKRSH + G ++ + AAP
Sbjct: 4 KVHECSICLKIFPSGQALGGHKRSHHLAGGSESARNFQSQTIVLQEAAPEIR-------- 159
Query: 494 AFAAAANPSLFDLNLPAPDDE 514
FDLNLPA +E
Sbjct: 160 --------DFFDLNLPASTEE 198
Score = 35.8 bits (81), Expect = 0.047
Identities = 14/27 (51%), Positives = 19/27 (69%)
Frame = +1
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENS 32
C CLK FP G++LGGH R+H ++ S
Sbjct: 16 CSICLKIFPSGQALGGHKRSHHLAGGS 96
>TC205046 similar to UP|P93166 (P93166) SCOF-1, partial (43%)
Length = 1110
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = +1
Query: 436 HECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPAPPAF 495
HEC IC+K F +GQALGGHKR H+ GGN+ + ++A+ ++ + A
Sbjct: 478 HECSICHKSFPTGQALGGHKRCHYDGGNNHSN--------SNANGNNSSGVTTSDGGAAS 633
Query: 496 AAAANPSLFDLNLPAP 511
+++ FDLNLPAP
Sbjct: 634 SSSHAFRGFDLNLPAP 681
Score = 53.1 bits (126), Expect = 3e-07
Identities = 31/79 (39%), Positives = 40/79 (50%)
Frame = +1
Query: 406 AQSNKNMNGKTNKKSSYKGKKKMKSKKSKEHECPICNKIFKSGQALGGHKRSHFIGGNDD 465
AQS N N T SS + K+ H C +CNK F S QALGGHK SH ++
Sbjct: 223 AQSGNNNN--TQLPSSSQSHKEASPPLKLSHRCTVCNKAFPSYQALGGHKASHRKASSES 396
Query: 466 NTLVIRPAAAAHAHAAPAA 484
NT A +A A+ + +A
Sbjct: 397 NTTASAVAVSATANDSVSA 453
Score = 38.5 bits (88), Expect = 0.007
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Frame = +1
Query: 94 HSNAAATVQMEKFCKECGKGFPSLKALCGHMACHSEKDKGANRIESVSGVREKQKLVMDS 153
H A+ +++ C C K FPS +AL GH A H + +N S V + +
Sbjct: 274 HKEASPPLKLSHRCTVCNKAFPSYQALGGHKASHRKASSESNTTASAVAVSATANDSVSA 453
Query: 154 QSDTEASVQTDSRRSRRMKFKNLSGG-------GGDNKSSSSLHWGNCSSSVS 199
+ + S + GG GG+N S+S+ + GN SS V+
Sbjct: 454 STVGGGRMHECSICHKSFPTGQALGGHKRCHYDGGNNHSNSNAN-GNNSSGVT 609
>TC203295 similar to UP|P93166 (P93166) SCOF-1, partial (52%)
Length = 1328
Score = 55.1 bits (131), Expect = 8e-08
Identities = 24/56 (42%), Positives = 34/56 (59%)
Frame = +3
Query: 408 SNKNMNGKTNKKSSYKGKKKMKSKKSKEHECPICNKIFKSGQALGGHKRSHFIGGN 463
S++ + G+ + SS + ++ HEC IC K F +GQALGGHKR H+ GGN
Sbjct: 438 SHRKLGGEHHSTSSAVTTSSASNGGARTHECSICQKTFPTGQALGGHKRCHYEGGN 605
Score = 40.0 bits (92), Expect = 0.003
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 436 HECPICNKIFKSGQALGGHKRSH-FIGGNDDNT 467
++C +CNK F S QALGGHK SH +GG +T
Sbjct: 375 YKCSVCNKAFSSYQALGGHKASHRKLGGEHHST 473
Score = 29.6 bits (65), Expect = 3.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 107 CKECGKGFPSLKALCGHMACHSEKDKGA 134
C C K FP+ +AL GH CH E A
Sbjct: 528 CSICQKTFPTGQALGGHKRCHYEGGNSA 611
>TC221557 similar to UP|Q43614 (Q43614) DNA-binding protein, partial (39%)
Length = 1114
Score = 55.1 bits (131), Expect = 8e-08
Identities = 83/364 (22%), Positives = 129/364 (34%)
Frame = +3
Query: 151 MDSQSDTEASVQTDSRRSRRMKFKNLSGGGGDNKSSSSLHWGNCSSSVSEVEQEQEDVAR 210
+DS + T + +R++RM+ + G +SS+ + +SS + E E+ED+A
Sbjct: 135 LDSNNSTHNGI-AKGKRTKRMRLLSPCGVVATTVTSST----SSASSTTTYESEEEDMAN 299
Query: 211 CLMLLSRDSTYKGRFPLVTESSDNNSVVVEEKSPSVDTKFAVMNRGKNIVGAKNNGFELA 270
CL+LL++ P D V +++G E
Sbjct: 300 CLILLAQGGESHHHPP----RHDKQQV-------------------------EDHGLENC 392
Query: 271 EKKLNKDGKMKSVEIGYVSDNSDSGYFTYGPKKVESDDSSDGFFRNDAKSSKVGYFSSFQ 330
+ DG +K+ E G ++S+ T ++++ GF+ + K+ F SFQ
Sbjct: 393 D-----DGAIKTEEKG---NSSNVNTTTAATTTAANNNTKVGFYIYECKTCN-RTFPSFQ 545
Query: 331 DHDFESSKKIISRGRNRNSAEFKKVVLENSSKKTKNGYNNEVYESLKIDRESYSEDSAYE 390
+ G +R S + K+ E + L S +
Sbjct: 546 -----------ALGGHRASHKKPKLAAEEKKQPLPPS-------PLPPPTPSQLQHMIVT 671
Query: 391 SDENSSESDSYPAPKAQSNKNMNGKTNKKSSYKGKKKMKSKKSKEHECPICNKIFKSGQA 450
+ + E P NG NK K HEC IC F SGQA
Sbjct: 672 NYDRFEEGSVKSGPPISLQLGNNGNNNK--------------GKIHECSICGSEFTSGQA 809
Query: 451 LGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPAPPAFAAAANPSLFDLNLPA 510
LGGH R H N +N + A PP N DLNLPA
Sbjct: 810 LGGHMRRHRASTNANNVVDTTSCNTVITTTITA-------VPP-----RNILQLDLNLPA 953
Query: 511 PDDE 514
P+D+
Sbjct: 954 PEDD 965
Score = 37.4 bits (85), Expect = 0.016
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 17/153 (11%)
Frame = +3
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENSLQSNEEKR-------------MNANASVNAMFK 52
CK C + FP ++LGGH +H + L + E+K+ + V +
Sbjct: 510 CKTCNRTFPSFQALGGHRASH--KKPKLAAEEKKQPLPPSPLPPPTPSQLQHMIVTNYDR 683
Query: 53 FDEGRKRK----RLDLGSNGGGSGGDDGNLIYGLRENPKKTTRFVHSNAAATVQMEKFCK 108
F+EG + L LG+NG + G +H C
Sbjct: 684 FEEGSVKSGPPISLQLGNNGNNNKGK------------------IHE-----------CS 776
Query: 109 ECGKGFPSLKALCGHMACHSEKDKGANRIESVS 141
CG F S +AL GHM H N +++ S
Sbjct: 777 ICGSEFTSGQALGGHMRRHRASTNANNVVDTTS 875
Score = 31.6 bits (70), Expect = 0.89
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 107 CKECGKGFPSLKALCGHMACHSE 129
CK C + FPS +AL GH A H +
Sbjct: 510 CKTCNRTFPSFQALGGHRASHKK 578
Score = 31.6 bits (70), Expect = 0.89
Identities = 12/27 (44%), Positives = 16/27 (58%)
Frame = +3
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENS 32
C C F G++LGGH+R H S N+
Sbjct: 771 CSICGSEFTSGQALGGHMRRHRASTNA 851
>TC203387 similar to UP|Q9XEU0 (Q9XEU0) Zinc-finger protein 1, partial (51%)
Length = 1474
Score = 55.1 bits (131), Expect = 8e-08
Identities = 24/56 (42%), Positives = 34/56 (59%)
Frame = +3
Query: 408 SNKNMNGKTNKKSSYKGKKKMKSKKSKEHECPICNKIFKSGQALGGHKRSHFIGGN 463
S++ + G+ + SS + + HEC IC+K F +GQALGGHKR H+ GGN
Sbjct: 429 SHRKLAGENHPTSSAVTTSSASNGGGRTHECSICHKTFSTGQALGGHKRCHYEGGN 596
Score = 39.7 bits (91), Expect = 0.003
Identities = 18/44 (40%), Positives = 27/44 (60%), Gaps = 2/44 (4%)
Frame = +3
Query: 436 HECPICNKIFKSGQALGGHKRSH--FIGGNDDNTLVIRPAAAAH 477
++C +CNK F S QALGGHK SH G N + + ++A++
Sbjct: 366 YKCSVCNKAFSSYQALGGHKASHRKLAGENHPTSSAVTTSSASN 497
>TC216904 UP|P93166 (P93166) SCOF-1, complete
Length = 1114
Score = 54.3 bits (129), Expect = 1e-07
Identities = 34/84 (40%), Positives = 44/84 (51%), Gaps = 5/84 (5%)
Frame = +2
Query: 434 KEHECPICNKIFKSGQALGGHKRSHFIG---GNDDNT-LVIRPAAAAHAHAAPAAHAHAA 489
K HEC IC+K F +GQALGGHKR H+ G GN++N+ V+ A+ +H H
Sbjct: 611 KAHECSICHKSFPTGQALGGHKRCHYEGNGNGNNNNSNSVVTVASEGVGSTHTVSHGHHR 790
Query: 490 PAPPAFAAAANPSLFDLNLPA-PD 512
FDLN+PA PD
Sbjct: 791 D-------------FDLNIPAFPD 823
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/54 (38%), Positives = 29/54 (52%), Gaps = 2/54 (3%)
Frame = +2
Query: 436 HECPICNKIFKSGQALGGHKRSH--FIGGNDDNTLVIRPAAAAHAHAAPAAHAH 487
++C +C+K F S QALGGHK SH G +D ++AA +A AH
Sbjct: 458 YKCSVCDKSFPSYQALGGHKASHRKLAGAAEDQPPSTTTSSAAATSSASGGKAH 619
Score = 35.4 bits (80), Expect = 0.062
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 86 PKKTTRFVHSNAAATVQMEKFCKECGKGFPSLKALCGHMACHSEKDKGANRIESVSGV 143
P TT + ++A+ C C K FP+ +AL GH CH E + N S S V
Sbjct: 560 PSTTTSSAAATSSASGGKAHECSICHKSFPTGQALGGHKRCHYEGNGNGNNNNSNSVV 733
Score = 30.0 bits (66), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 107 CKECGKGFPSLKALCGHMACH 127
C C K FPS +AL GH A H
Sbjct: 464 CSVCDKSFPSYQALGGHKASH 526
>TC220446 similar to UP|O22083 (O22083) ZPT2-11, partial (24%)
Length = 668
Score = 53.9 bits (128), Expect = 2e-07
Identities = 31/83 (37%), Positives = 38/83 (45%)
Frame = +1
Query: 432 KSKEHECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPA 491
KSK HEC IC F SGQALGGH R H N++N + ++ A
Sbjct: 244 KSKIHECSICGSEFTSGQALGGHMRRHRASNNNNNIVQTTTTTTTTSNGA---------- 393
Query: 492 PPAFAAAANPSLFDLNLPAPDDE 514
N DLNLPAP+D+
Sbjct: 394 --VDVKPRNVLELDLNLPAPEDD 456
Score = 35.8 bits (81), Expect = 0.047
Identities = 34/134 (25%), Positives = 55/134 (40%), Gaps = 3/134 (2%)
Frame = +1
Query: 11 KRFPCGKSLGGHIRTHM---MSENSLQSNEEKRMNANASVNAMFKFDEGRKRKRLDLGSN 67
+ FP ++LGGH +H M E L S AS +++F F+E ++ ++ S
Sbjct: 4 RTFPSFQALGGHRASHKKPKMEEKKLLSPPLLLPPLPASSSSLFNFEEAKQSHMKNIISP 183
Query: 68 GGGSGGDDGNLIYGLRENPKKTTRFVHSNAAATVQMEKFCKECGKGFPSLKALCGHMACH 127
G GL + K+ +H C CG F S +AL GHM H
Sbjct: 184 SVSLQLGCGINKVGLNFHGNKSK--IHE-----------CSICGSEFTSGQALGGHMRRH 324
Query: 128 SEKDKGANRIESVS 141
+ N +++ +
Sbjct: 325 RASNNNNNIVQTTT 366
Score = 32.3 bits (72), Expect = 0.52
Identities = 15/46 (32%), Positives = 24/46 (51%), Gaps = 3/46 (6%)
Frame = +1
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENS---LQSNEEKRMNANASVN 48
C C F G++LGGH+R H S N+ +Q+ +N +V+
Sbjct: 262 CSICGSEFTSGQALGGHMRRHRASNNNNNIVQTTTTTTTTSNGAVD 399
>CD409939 similar to PIR|S19159|S191 finger protein EPF1 - garden petunia,
partial (35%)
Length = 657
Score = 53.1 bits (126), Expect = 3e-07
Identities = 33/85 (38%), Positives = 39/85 (45%)
Frame = -2
Query: 430 SKKSKEHECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAA 489
+ K K HEC IC F SGQALGGH R H N + T+V +
Sbjct: 386 NNKGKIHECSICGSEFTSGQALGGHMRRHRASTNTNTTVV------DTTRCNTVSTTIIT 225
Query: 490 PAPPAFAAAANPSLFDLNLPAPDDE 514
APP N DLNLPAP+D+
Sbjct: 224 TAPP-----RNILQLDLNLPAPEDD 165
Score = 37.0 bits (84), Expect = 0.021
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = -2
Query: 436 HECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPAPPA 494
+EC CN+ F S QALGGH+ SH +P AA P A P+PP+
Sbjct: 623 YECKTCNRTFPSFQALGGHRASH-----------KKPKLAAEEKKQPLP-PPAQPSPPS 483
Score = 34.7 bits (78), Expect = 0.11
Identities = 35/138 (25%), Positives = 50/138 (35%), Gaps = 16/138 (11%)
Frame = -2
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENSLQSNEEKR------------MNANASVNAMFKF 53
CK C + FP ++LGGH +H + L + E+K+ + V +F
Sbjct: 617 CKTCNRTFPSFQALGGHRASH--KKPKLAAEEKKQPLPPPAQPSPPSQLQHMIVTNYDRF 444
Query: 54 DEGRKRK----RLDLGSNGGGSGGDDGNLIYGLRENPKKTTRFVHSNAAATVQMEKFCKE 109
+EG + L LG+NG G +H C
Sbjct: 443 EEGNVKSGPPISLQLGNNGNNKGK-------------------IHE-----------CSI 354
Query: 110 CGKGFPSLKALCGHMACH 127
CG F S +AL GHM H
Sbjct: 353 CGSEFTSGQALGGHMRRH 300
Score = 31.6 bits (70), Expect = 0.89
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 107 CKECGKGFPSLKALCGHMACHSE 129
CK C + FPS +AL GH A H +
Sbjct: 617 CKTCNRTFPSFQALGGHRASHKK 549
Score = 31.6 bits (70), Expect = 0.89
Identities = 12/27 (44%), Positives = 16/27 (58%)
Frame = -2
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENS 32
C C F G++LGGH+R H S N+
Sbjct: 362 CSICGSEFTSGQALGGHMRRHRASTNT 282
>TC209064 similar to UP|P93166 (P93166) SCOF-1, partial (93%)
Length = 945
Score = 52.8 bits (125), Expect = 4e-07
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 434 KEHECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPAPP 493
+ HEC IC+K F +GQALGGHKR H+ G ++ N + A + + H
Sbjct: 477 RTHECSICHKSFPTGQALGGHKRCHYEGNSNGNNNNSNSSVTAASEGVGSTHT------- 635
Query: 494 AFAAAANPSLFDLNLPA-PD 512
+ + FDLN+PA PD
Sbjct: 636 --VSHGHHRDFDLNIPAFPD 689
Score = 43.1 bits (100), Expect = 3e-04
Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 4/76 (5%)
Frame = +3
Query: 414 GKTNKKSSYKGKKKMKSKKSKEHECPICNKIFKSGQALGGHKRSH----FIGGNDDNTLV 469
G T + S+ + ++C +CNK F S QALGGHK SH GG D T
Sbjct: 258 GTTRRVSTPPPQPTPDPSTKLSYKCSVCNKSFPSYQALGGHKASHRKLAASGGEDQPTTT 437
Query: 470 IRPAAAAHAHAAPAAH 485
A++A+ + H
Sbjct: 438 SSAASSANTASGGRTH 485
Score = 38.1 bits (87), Expect = 0.010
Identities = 35/138 (25%), Positives = 46/138 (32%)
Frame = +3
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENSLQSNEEKRMNANASVNAMFKFDEGRKRKRLDLG 65
C C K FP ++LGGH +H ++L
Sbjct: 330 CSVCNKSFPSYQALGGHKASH---------------------------------RKL--- 401
Query: 66 SNGGGSGGDDGNLIYGLRENPKKTTRFVHSNAAATVQMEKFCKECGKGFPSLKALCGHMA 125
SGG+D P T+ S A+ C C K FP+ +AL GH
Sbjct: 402 ---AASGGED---------QPTTTSSAASSANTASGGRTHECSICHKSFPTGQALGGHKR 545
Query: 126 CHSEKDKGANRIESVSGV 143
CH E + N S S V
Sbjct: 546 CHYEGNSNGNNNNSNSSV 599
Score = 30.8 bits (68), Expect = 1.5
Identities = 23/93 (24%), Positives = 36/93 (37%), Gaps = 12/93 (12%)
Frame = +3
Query: 107 CKECGKGFPSLKALCGHMACH------------SEKDKGANRIESVSGVREKQKLVMDSQ 154
C C K FPS +AL GH A H + A+ + SG R + +
Sbjct: 330 CSVCNKSFPSYQALGGHKASHRKLAASGGEDQPTTTSSAASSANTASGGRTHECSICHKS 509
Query: 155 SDTEASVQTDSRRSRRMKFKNLSGGGGDNKSSS 187
T ++ +R ++ S G +N +SS
Sbjct: 510 FPTGQAL----GGHKRCHYEGNSNGNNNNSNSS 596
>TC234818 similar to UP|O22082 (O22082) C2H2 zinc-finger protein ZPT2-10,
partial (19%)
Length = 684
Score = 48.9 bits (115), Expect = 5e-06
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = +3
Query: 414 GKTNKKSSYKGKKKM----KSKKSKEHECPICNKIFKSGQALGGHKRSHFIGGNDDNTLV 469
GKT + S G + S +CP C+K+F SGQALGGHKRSH
Sbjct: 234 GKTFRSSRALGSHRSICEGSGNDSNIFQCPFCSKVFGSGQALGGHKRSH----------- 380
Query: 470 IRPAAAAHAHAAPAAHAHAAPAPPAFAAAANPSLFDLNLPAPDDE 514
+ P+++ A+ + S DLNLPAP ++
Sbjct: 381 LMPSSSTTANND--------------SVRLKESFIDLNLPAPPED 473
Score = 37.0 bits (84), Expect = 0.021
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENSLQSNEE 38
C +C K F G++LGGH R+H+M +S +N +
Sbjct: 318 CPFCSKVFGSGQALGGHKRSHLMPSSSTTANND 416
Score = 32.3 bits (72), Expect = 0.52
Identities = 22/47 (46%), Positives = 27/47 (56%)
Frame = +3
Query: 196 SSVSEVEQEQEDVARCLMLLSRDSTYKGRFPLVTESSDNNSVVVEEK 242
SSVS+ E EDVA CLM+LSRD K V +D + V EE+
Sbjct: 9 SSVSDTSPE-EDVAMCLMMLSRDRWSKYYNINVVNVNDEDVVEEEEE 146
>TC230715 similar to UP|Q39217 (Q39217) Zinc finger protein, partial (41%)
Length = 629
Score = 48.1 bits (113), Expect = 9e-06
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Frame = +2
Query: 358 ENSSKKTKNGYNNEVYESLKIDRESYS------EDSAYESDENSSESDSYPAPKAQSNKN 411
EN S++T G + + ++ ++S + +E + + S+ +A
Sbjct: 53 ENESEETIIGLAKSLMQLSRVQQQSNKPLLKTFSPTEFECKTCNRKFSSF---QALGGHR 223
Query: 412 MNGKTNKKSSYKGKKKMKSKKSKEHECPICNKIFKSGQALGGHKRSH--FIGGNDDNTLV 469
+ K K + + K++ K K K HEC IC F GQALGGH R H I ND+N
Sbjct: 224 ASHKKPKFEAEELKEEAKKTKPKMHECSICGMEFSLGQALGGHMRKHRGAISENDNNNEA 403
Query: 470 IRPAAAAHAHA 480
+ A A A
Sbjct: 404 LSSIKQAIAKA 436
Score = 29.6 bits (65), Expect = 3.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENSLQSNEE 38
C C F G++LGGH+R H + + +N E
Sbjct: 302 CSICGMEFSLGQALGGHMRKHRGAISENDNNNE 400
Score = 29.3 bits (64), Expect = 4.4
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Frame = +2
Query: 82 LRENPKKTTRFVHSNAAATVQMEKFCKECGKGFPSLKALCGHMACH----SEKDKGANRI 137
L+E KKT +H C CG F +AL GHM H SE D +
Sbjct: 260 LKEEAKKTKPKMHE-----------CSICGMEFSLGQALGGHMRKHRGAISENDNNNEAL 406
Query: 138 ESVSGVREKQKLVMDSQSDTEASVQTD 164
S+ K ++ S S ++ D
Sbjct: 407 SSIKQAIAKAPVLKRSNSKRVMCLEMD 487
Score = 28.5 bits (62), Expect = 7.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 107 CKECGKGFPSLKALCGHMACHSE 129
CK C + F S +AL GH A H +
Sbjct: 170 CKTCNRKFSSFQALGGHRASHKK 238
>TC233289
Length = 961
Score = 48.1 bits (113), Expect = 9e-06
Identities = 29/81 (35%), Positives = 38/81 (46%)
Frame = +1
Query: 434 KEHECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPAPP 493
K ECP C K+F SGQALGGHKRSH I P++++ +
Sbjct: 754 KVFECPFCYKLFGSGQALGGHKRSHLI-----------PSSSSTVN-------------- 858
Query: 494 AFAAAANPSLFDLNLPAPDDE 514
+ S DLNLPAP ++
Sbjct: 859 -HSVKLKQSFIDLNLPAPAED 918
Score = 43.9 bits (102), Expect = 2e-04
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Frame = +1
Query: 107 CKECGKGFPSLKALCGHM----------------ACHSEKDKGANRIESVSGVREKQKLV 150
CK C + F + +AL GHM +C S D E +RE K
Sbjct: 172 CKLCSRSFSNGRALGGHMKAHLASLPLPLPPKLHSCFSSSDS-----EQEQSLRENPKKT 336
Query: 151 M------DSQSDTEASVQTDSRRSRRMKFKNLSGGGGDNKSSSSLHWGNCSSSVSEVEQE 204
+ D +S+TE++ +RS+R + + + L SSVS+ E
Sbjct: 337 LRILDPEDRESETESNKNPTRQRSKRNWKSTMPKLXXGHPEAEPL------SSVSDTSPE 498
Query: 205 QEDVARCLMLLSRDSTYKGRF----PLVTESSDNNSVVVEEK 242
ED+A CLM+LSRD+ + + P T S + + ++ K
Sbjct: 499 -EDLAMCLMMLSRDTWQEHKLANAGPPKTRCSSGSEIKLKNK 621
Score = 35.8 bits (81), Expect = 0.047
Identities = 11/23 (47%), Positives = 19/23 (81%)
Frame = +1
Query: 436 HECPICNKIFKSGQALGGHKRSH 458
H+C +C++ F +G+ALGGH ++H
Sbjct: 166 HKCKLCSRSFSNGRALGGHMKAH 234
Score = 34.7 bits (78), Expect = 0.11
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSENSLQSNEEKRM 41
C +C K F G++LGGH R+H++ +S N ++
Sbjct: 766 CPFCYKLFGSGQALGGHKRSHLIPSSSSTVNHSVKL 873
Score = 33.5 bits (75), Expect = 0.23
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 1 MEDRVCKYCLKRFPCGKSLGGHIRTHMMS 29
M+ CK C + F G++LGGH++ H+ S
Sbjct: 157 MDRHKCKLCSRSFSNGRALGGHMKAHLAS 243
>AW349557
Length = 557
Score = 47.8 bits (112), Expect = 1e-05
Identities = 31/98 (31%), Positives = 38/98 (38%)
Frame = -3
Query: 417 NKKSSYKGKKKMKSKKSKEHECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAA 476
N SS + + K K HEC IC F SGQ LGGH R H G+ I +
Sbjct: 546 NNNSSSNXRMSTINAKCKVHECSICGAEFSSGQXLGGHMRRHRNFGSAPTCGAINANRES 367
Query: 477 HAHAAPAAHAHAAPAPPAFAAAANPSLFDLNLPAPDDE 514
H + DLNLPAP+D+
Sbjct: 366 KKHNKDVLN------------------LDLNLPAPEDD 307
>AW164352 similar to GP|1786142|dbj| PEThy;ZPT4-1 {Petunia x hybrida},
partial (6%)
Length = 437
Score = 47.0 bits (110), Expect = 2e-05
Identities = 27/82 (32%), Positives = 42/82 (50%), Gaps = 9/82 (10%)
Frame = +3
Query: 386 DSAYE---SDENSSESDSYPAPKAQ------SNKNMNGKTNKKSSYKGKKKMKSKKSKEH 436
+SA+E +D N + ++ Y + KA+ + + N + +G+ S K +
Sbjct: 135 NSAFEDNGTDNNHNSNNKYTSIKAKFMDSELKSSPLKSWVNNNKNSEGEFSKSSNKRGKF 314
Query: 437 ECPICNKIFKSGQALGGHKRSH 458
EC C KIF S QALGGH+ SH
Sbjct: 315 ECTTCKKIFHSYQALGGHRASH 380
>BM093731 similar to GP|2346978|dbj| ZPT2-14 {Petunia x hybrida}, partial
(39%)
Length = 421
Score = 42.0 bits (97), Expect = 7e-04
Identities = 23/59 (38%), Positives = 34/59 (56%), Gaps = 8/59 (13%)
Frame = +1
Query: 416 TNKKSSYKGKK-KMKSKKS-------KEHECPICNKIFKSGQALGGHKRSHFIGGNDDN 466
++KK ++G++ K ++KK K HEC IC F GQALGGH R H +++N
Sbjct: 211 SHKKPKFEGEELKEEAKKGLSLGNKPKMHECSICGMEFSLGQALGGHMRKHRGATSENN 387
Score = 40.0 bits (92), Expect = 0.003
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 423 KGKKKMKSKKSKEHECPICNKIFKSGQALGGHKRSH 458
K K +K+ E EC CN+ F S QALGGH+ SH
Sbjct: 109 KSKPLLKTFSPTEFECKTCNRKFPSFQALGGHRASH 216
Score = 31.6 bits (70), Expect = 0.89
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 107 CKECGKGFPSLKALCGHMACHSE 129
CK C + FPS +AL GH A H +
Sbjct: 154 CKTCNRKFPSFQALGGHRASHKK 222
Score = 28.5 bits (62), Expect = 7.6
Identities = 13/29 (44%), Positives = 17/29 (57%), Gaps = 2/29 (6%)
Frame = +1
Query: 6 CKYCLKRFPCGKSLGGHIRTH--MMSENS 32
C C F G++LGGH+R H SEN+
Sbjct: 301 CSICGMEFSLGQALGGHMRKHRGATSENN 387
Score = 28.5 bits (62), Expect = 7.6
Identities = 10/21 (47%), Positives = 15/21 (70%)
Frame = +1
Query: 6 CKYCLKRFPCGKSLGGHIRTH 26
CK C ++FP ++LGGH +H
Sbjct: 154 CKTCNRKFPSFQALGGHRASH 216
>CO981629
Length = 844
Score = 41.2 bits (95), Expect = 0.001
Identities = 50/198 (25%), Positives = 78/198 (39%), Gaps = 5/198 (2%)
Frame = -3
Query: 243 SPSVDTKFAVMNRGKNIVGAKNNGFELAEKKLNKDGKMKSVEIGYVSDNSDSGYFTYGPK 302
S ++D+ + N N AKNN + NK+ + G +D +S
Sbjct: 815 SSNIDSSYGNRNSIHNSDSAKNNPRNGDDAYGNKNNNHNAKSNGNSNDYRNSN------- 657
Query: 303 KVESDDSSDGFFRNDAKSSKVGYFSSFQDHDFESSKKIISRGRN---RNS--AEFKKVVL 357
V+S +S+G +D S S+ H+ S K ++ N RNS A
Sbjct: 656 SVKSSGTSNGIRNSDCAKSN----SNVNGHNNSSCKSDGAKSNNNYTRNS*GASSNYSQT 489
Query: 358 ENSSKKTKNGYNNEVYESLKIDRESYSEDSAYESDENSSESDSYPAPKAQSNKNMNGKTN 417
+K NG NN S K D S + S Y + + PK+ + N N +
Sbjct: 488 SEDAKSNANGNNNS---SCKSDGASGNGKSNYNRNSDG--------PKSNAIGNDNQNSG 342
Query: 418 KKSSYKGKKKMKSKKSKE 435
KSS G +K+ S +S +
Sbjct: 341 AKSSDNGNEKINSNRSSD 288
>TC203979 similar to UP|O22086 (O22086) ZPT2-14, partial (39%)
Length = 820
Score = 40.8 bits (94), Expect = 0.001
Identities = 19/34 (55%), Positives = 22/34 (63%)
Frame = +3
Query: 425 KKKMKSKKSKEHECPICNKIFKSGQALGGHKRSH 458
K + KS S E EC CN+ F S QALGGH+ SH
Sbjct: 279 KTQQKSFGSVEFECKTCNRKFSSFQALGGHRASH 380
Score = 40.4 bits (93), Expect = 0.002
Identities = 22/48 (45%), Positives = 25/48 (51%), Gaps = 4/48 (8%)
Frame = +3
Query: 415 KTNKKSSYKGKKKMKS----KKSKEHECPICNKIFKSGQALGGHKRSH 458
K K + K++ KS K K HEC IC F GQALGGH R H
Sbjct: 381 KRQKLEGEELKEQAKSLSLWNKPKMHECSICGLEFSLGQALGGHMRKH 524
Score = 29.6 bits (65), Expect = 3.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSEN 31
C C F G++LGGH+R H S N
Sbjct: 462 CSICGLEFSLGQALGGHMRKHRASLN 539
Score = 28.5 bits (62), Expect = 7.6
Identities = 11/24 (45%), Positives = 14/24 (57%)
Frame = +3
Query: 107 CKECGKGFPSLKALCGHMACHSEK 130
CK C + F S +AL GH A H +
Sbjct: 318 CKTCNRKFSSFQALGGHRASHKRQ 389
>TC203987 similar to UP|O22084 (O22084) ZPT2-12, partial (37%)
Length = 742
Score = 39.7 bits (91), Expect = 0.003
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +1
Query: 432 KSKEHECPICNKIFKSGQALGGHKRSH 458
K K HEC IC F GQALGGH R H
Sbjct: 370 KPKMHECSICGLEFSLGQALGGHMRKH 450
Score = 36.2 bits (82), Expect = 0.036
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 425 KKKMKSKKSKEHECPICNKIFKSGQALGGHKRSH 458
K + K + E EC C++ F S QALGGH+ SH
Sbjct: 205 KAQQKGFGAVEFECKTCSRKFSSFQALGGHRASH 306
Score = 28.5 bits (62), Expect = 7.6
Identities = 11/24 (45%), Positives = 14/24 (57%)
Frame = +1
Query: 107 CKECGKGFPSLKALCGHMACHSEK 130
CK C + F S +AL GH A H +
Sbjct: 244 CKTCSRKFSSFQALGGHRASHKRQ 315
Score = 28.5 bits (62), Expect = 7.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSEN 31
C C F G++LGGH+R H + N
Sbjct: 388 CSICGLEFSLGQALGGHMRKHRAALN 465
>TC209563 similar to UP|O22084 (O22084) ZPT2-12, partial (45%)
Length = 768
Score = 39.3 bits (90), Expect = 0.004
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 431 KKSKEHECPICNKIFKSGQALGGHKRSHFIGGND 464
++ + H CPIC F GQALGGH R H ND
Sbjct: 350 QQPRMHPCPICGLEFAIGQALGGHMRKHRTAIND 451
Score = 33.9 bits (76), Expect = 0.18
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 435 EHECPICNKIFKSGQALGGHKRSH 458
+ +C CN+ F S QALGGH+ SH
Sbjct: 212 DFKCKTCNRRFSSFQALGGHRASH 283
Score = 28.5 bits (62), Expect = 7.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 107 CKECGKGFPSLKALCGHMACHSE 129
CK C + F S +AL GH A H +
Sbjct: 221 CKTCNRRFSSFQALGGHRASHKK 289
Score = 28.1 bits (61), Expect = 9.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 6 CKYCLKRFPCGKSLGGHIRTHMMSEN 31
C C F G++LGGH+R H + N
Sbjct: 371 CPICGLEFAIGQALGGHMRKHRTAIN 448
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.309 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,905,430
Number of Sequences: 63676
Number of extensions: 260332
Number of successful extensions: 2301
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2261
length of query: 514
length of database: 12,639,632
effective HSP length: 101
effective length of query: 413
effective length of database: 6,208,356
effective search space: 2564051028
effective search space used: 2564051028
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Medicago: description of AC146785.9