BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146784.5 + phase: 0
(283 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC204227 weakly similar to UP|Q9M6E1 (Q9M6E1) DNA-binding protei... 318 1e-87
TC204230 similar to UP|Q9M6E0 (Q9M6E0) DNA-binding protein 4 (Fr... 180 9e-46
TC204237 similar to UP|Q9SST6 (Q9SST6) Elicitor-induced DNA-bind... 152 2e-37
TC216116 similar to UP|Q9M6E1 (Q9M6E1) DNA-binding protein 3, pa... 125 3e-29
BI425013 96 2e-20
TC216647 similar to UP|WR41_ARATH (Q8H0Y8) Probable WRKY transcr... 92 2e-19
TC217291 similar to UP|WR30_ARATH (Q9FL62) Probable WRKY transcr... 90 1e-18
TC217290 weakly similar to UP|WR46_ARATH (Q9SKD9) Probable WRKY ... 90 1e-18
AI966709 weakly similar to PIR|T50861|T508 DNA-binding protein 4... 89 2e-18
TC209320 similar to UP|WR41_ARATH (Q8H0Y8) Probable WRKY transcr... 87 7e-18
TC232487 similar to UP|WR41_ARATH (Q8H0Y8) Probable WRKY transcr... 82 2e-16
TC218342 similar to UP|Q6IEK9 (Q6IEK9) WRKY transcription factor... 74 6e-14
AW306487 73 2e-13
TC232344 homologue to UP|WR13_ARATH (Q9SVB7) Probable WRKY trans... 70 8e-13
TC227103 similar to UP|WR23_ARATH (O22900) Probable WRKY transcr... 69 2e-12
TC211307 homologue to UP|WR57_ARATH (Q9C983) Probable WRKY trans... 69 2e-12
TC227101 homologue to UP|WR23_ARATH (O22900) Probable WRKY trans... 68 4e-12
TC227106 similar to UP|WR23_ARATH (O22900) Probable WRKY transcr... 68 5e-12
TC219386 similar to UP|WR24_ARATH (Q9FFS3) Probable WRKY transcr... 68 5e-12
TC216646 similar to UP|WR41_ARATH (Q8H0Y8) Probable WRKY transcr... 67 7e-12
>TC204227 weakly similar to UP|Q9M6E1 (Q9M6E1) DNA-binding protein 3, partial
(25%)
Length = 1110
Score = 318 bits (816), Expect = 1e-87
Identities = 175/288 (60%), Positives = 207/288 (71%), Gaps = 16/288 (5%)
Frame = +1
Query: 4 ENLAHGGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTN 63
ENL R K ++ELLRGR+ A +L++++N + D DGS P FA+ L+KEVL +FTN
Sbjct: 46 ENLGGSSRRKAIEELLRGRDSAQQLKSVINGTYD----DGSATP-FAQQLVKEVLMSFTN 210
Query: 64 SLLFLNNNPTSEGSDM------QLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKES 117
SLLFL+NNPTSE + KSEDS ESNCKSS +KE RGCYKRR+ QTWEKES
Sbjct: 211 SLLFLHNNPTSESHHVFNVQVWDSPKSEDSQESNCKSSTIKEPRGCYKRRRTEQTWEKES 390
Query: 118 EQPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSG 177
E P +DGH WRKYGQK+IL+ FPRNYYRCTHK DQGC+A KQVQR+QE+P L++TTY G
Sbjct: 391 EAPIDDGHHWRKYGQKEILNAKFPRNYYRCTHKFDQGCQATKQVQRVQEEPILYKTTYYG 570
Query: 178 HHTCRILQNPEIIVD-YPTDHSSMFLSFDNSFPTPAKQDCPFLSVK------KEECKEEV 230
HTC+ L NPEII+D SS FLSFDNSFPTP+KQ+CPFLS K ECKEE
Sbjct: 571 LHTCKNLANPEIILDPMSPSSSSKFLSFDNSFPTPSKQECPFLSSSNLPSSVKGECKEE- 747
Query: 231 VHPPPSSNDYL--SGLTFD-DPEKDVTLSSTLDSHDHLGVHISDIMYD 275
V P SSN YL S LTFD P VTLSSTLDS ++ V ISD++YD
Sbjct: 748 VPPSTSSNHYLISSDLTFDSSPRHHVTLSSTLDS-EYKSVDISDVLYD 888
>TC204230 similar to UP|Q9M6E0 (Q9M6E0) DNA-binding protein 4 (Fragment),
partial (24%)
Length = 717
Score = 180 bits (456), Expect(2) = 9e-46
Identities = 100/161 (62%), Positives = 115/161 (71%), Gaps = 13/161 (8%)
Frame = +3
Query: 128 RKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRILQNP 187
RKYGQK+IL+ FPRNYYRCTHK DQGC+A KQVQR+QE+P L +TTY GHHTC+ NP
Sbjct: 39 RKYGQKEILNAKFPRNYYRCTHKFDQGCQATKQVQRVQEEPILFKTTYYGHHTCKNSANP 218
Query: 188 EIIVD-YPTDHSSMFLSFDNSFPTPAKQDCPFLSVK---------KEECKEEVVHPPPSS 237
+II+D SS FLSFDNSF TP+KQ+CPFLS K ECKEE V P SS
Sbjct: 219 DIILDPMSPSSSSKFLSFDNSFSTPSKQECPFLSSSNNFPSSSSVKRECKEE-VPPSISS 395
Query: 238 NDYL--SGLTFD-DPEKDVTLSSTLDSHDHLGVHISDIMYD 275
NDYL S LTFD P VTLSSTLDS ++ V ISD++YD
Sbjct: 396 NDYLISSDLTFDSSPRHHVTLSSTLDS-EYKSVDISDVLYD 515
Score = 21.2 bits (43), Expect(2) = 9e-46
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 116 ESEQPEEDGHQWRKYGQK 133
ESE P +DGH K K
Sbjct: 2 ESEAPIDDGHHXEKVWPK 55
>TC204237 similar to UP|Q9SST6 (Q9SST6) Elicitor-induced DNA-binding protein
homolog, partial (5%)
Length = 477
Score = 152 bits (383), Expect = 2e-37
Identities = 78/130 (60%), Positives = 94/130 (72%), Gaps = 6/130 (4%)
Frame = +3
Query: 6 LAHGGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSL 65
L R K ++ELLRGR+ A +LR+++N S + + ST P FAE L+KEVL +FTNSL
Sbjct: 96 LGCSSRRKAIEELLRGRDCAKQLRSVINGSCE---DGSSTTPSFAEQLVKEVLMSFTNSL 266
Query: 66 LFLNNNPTSEGSDM------QLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQ 119
FL NNPTSE D+ + KSEDS ESNCKSSI+KERRGCYKRR+ QTWEKESE
Sbjct: 267 SFLKNNPTSESHDVSNVQVCESPKSEDSQESNCKSSIIKERRGCYKRRRTEQTWEKESEA 446
Query: 120 PEEDGHQWRK 129
P +DGHQWRK
Sbjct: 447 PIDDGHQWRK 476
>TC216116 similar to UP|Q9M6E1 (Q9M6E1) DNA-binding protein 3, partial (26%)
Length = 1525
Score = 125 bits (313), Expect = 3e-29
Identities = 79/188 (42%), Positives = 109/188 (57%), Gaps = 1/188 (0%)
Frame = +2
Query: 23 ELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSLLFLNNNPTSEGSDMQLT 82
E ++ N+ N I+NN G + P + EV+ T S+ N+P+SE
Sbjct: 296 ETTVEILNMANLLTKIHNN-GKCLKPSSVH*KLEVIITQVASI----NDPSSE------- 439
Query: 83 KSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQPEEDGHQWRKYGQKKILHTDFPR 142
DS ES S K+RRG YKRRK QTW + Q +D H WRKYGQK+IL++ FPR
Sbjct: 440 ---DSTESKKGS---KDRRGSYKRRKTEQTWTIVA-QTTDDNHAWRKYGQKEILNSQFPR 598
Query: 143 NYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCR-ILQNPEIIVDYPTDHSSMF 201
+Y+RCT K +QGC+A KQVQRIQE+P + TY G HTC+ L+ P+++ T S F
Sbjct: 599 SYFRCTRKFEQGCRATKQVQRIQENPDRYNITYIGFHTCKDTLKAPQVVTHSKTWDS--F 772
Query: 202 LSFDNSFP 209
L +++ P
Sbjct: 773 LGPESNVP 796
>BI425013
Length = 281
Score = 95.9 bits (237), Expect = 2e-20
Identities = 42/81 (51%), Positives = 54/81 (65%)
Frame = +2
Query: 108 KISQTWEKESEQPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQED 167
++ + E E P EDG+ WRKYGQK IL +PR+YYRCT ++ QGC A KQVQR ED
Sbjct: 8 RVRVSCESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRSTQGCWATKQVQRSDED 187
Query: 168 PPLHRTTYSGHHTCRILQNPE 188
P L TY G+HTC ++ N +
Sbjct: 188 PTLFDITYRGNHTCSLVNNAD 250
>TC216647 similar to UP|WR41_ARATH (Q8H0Y8) Probable WRKY transcription
factor 41 (WRKY DNA-binding protein 41), partial (28%)
Length = 1253
Score = 92.4 bits (228), Expect = 2e-19
Identities = 44/85 (51%), Positives = 51/85 (59%), Gaps = 8/85 (9%)
Frame = +1
Query: 105 KRRKISQTW--------EKESEQPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCK 156
K+RK + W E E P ED + WRKYGQK IL +PR+YYRCT +N QGC
Sbjct: 76 KKRKATPKWMDHVRVSCESGLEGPHEDSYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCW 255
Query: 157 AIKQVQRIQEDPPLHRTTYSGHHTC 181
A KQVQR EDP + TY G HTC
Sbjct: 256 ATKQVQRSDEDPTVFDITYRGKHTC 330
>TC217291 similar to UP|WR30_ARATH (Q9FL62) Probable WRKY transcription
factor 30 (WRKY DNA-binding protein 30), partial (21%)
Length = 1108
Score = 90.1 bits (222), Expect = 1e-18
Identities = 57/171 (33%), Positives = 83/171 (48%)
Frame = +1
Query: 67 FLNNNPTSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQPEEDGHQ 126
F N +P SE + ++ K++D + K C ++ K+ E +DG+
Sbjct: 82 FTNGSPKSEVMEPEI-KNKDVFKKR------KTMSTCTEQVKVCLGTAHEGSL--DDGYS 234
Query: 127 WRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRILQN 186
WRKYGQK IL FPR YYRCT++N QGC A KQVQ+ EDP + TY G HTC +
Sbjct: 235 WRKYGQKDILGAKFPRGYYRCTYRNVQGCLATKQVQKSDEDPMICEITYKGRHTCTQASH 414
Query: 187 PEIIVDYPTDHSSMFLSFDNSFPTPAKQDCPFLSVKKEECKEEVVHPPPSS 237
V P + + L +N T +K + +E++ PP +
Sbjct: 415 LNKTV-IPPSKTKVNLLGENKHQTH--------QIKNQPRQEKIEQQPPKT 540
>TC217290 weakly similar to UP|WR46_ARATH (Q9SKD9) Probable WRKY
transcription factor 46 (WRKY DNA-binding protein 46),
partial (28%)
Length = 1151
Score = 89.7 bits (221), Expect = 1e-18
Identities = 49/120 (40%), Positives = 68/120 (55%), Gaps = 21/120 (17%)
Frame = +1
Query: 83 KSEDSLESNC-------KSSIVK---ERRGCYKRRKISQTWEKESEQPE----------- 121
K+ ++S+C KS +++ + + +K+RK T K +EQ +
Sbjct: 4 KNGSMMDSHCPLTNGSPKSEVLEPEVKNKNVFKKRK---TMSKLTEQVKVRLGTAHEGSL 174
Query: 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTC 181
+DG+ WRKYGQK IL FPR YYRCT++N QGC A KQVQ+ EDP + TY G HTC
Sbjct: 175 DDGYSWRKYGQKDILGAKFPRGYYRCTYRNVQGCLATKQVQKSDEDPMICEITYKGRHTC 354
>AI966709 weakly similar to PIR|T50861|T508 DNA-binding protein 4 [imported]
- common tobacco (fragment), partial (25%)
Length = 181
Score = 89.4 bits (220), Expect = 2e-18
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +2
Query: 123 DGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTC 181
D H WRKYGQK +L+++FPR+Y+RC HK DQGC A KQVQR QE+ ++RTTY G HTC
Sbjct: 2 DNHVWRKYGQKGVLNSEFPRSYFRCGHKYDQGCLAKKQVQRDQENSNMYRTTYIGIHTC 178
>TC209320 similar to UP|WR41_ARATH (Q8H0Y8) Probable WRKY transcription
factor 41 (WRKY DNA-binding protein 41), partial (27%)
Length = 1201
Score = 87.4 bits (215), Expect = 7e-18
Identities = 38/60 (63%), Positives = 41/60 (68%)
Frame = +1
Query: 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTC 181
+DG+ WRKYGQK IL FPR YYRCT +N QGC A KQVQR EDP TY G HTC
Sbjct: 85 DDGYSWRKYGQKDILGAKFPRGYYRCTQRNVQGCLATKQVQRSDEDPTTIEVTYRGRHTC 264
>TC232487 similar to UP|WR41_ARATH (Q8H0Y8) Probable WRKY transcription
factor 41 (WRKY DNA-binding protein 41), partial (18%)
Length = 758
Score = 82.4 bits (202), Expect = 2e-16
Identities = 53/149 (35%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Frame = +3
Query: 125 HQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRIL 184
+ WRKYGQK IL +PR+YYRCT + +GC A KQVQR +ED + TY G HTC+
Sbjct: 3 YSWRKYGQKDILSAKYPRSYYRCTFRKTKGCFATKQVQRSEEDHTIFDITYRGSHTCK-- 176
Query: 185 QNPEII----VDYPTDHSSMFLSFDNSFPTPAKQDCPFLSVKKEECKEEVVHPPP--SSN 238
+N ++ DY T S+ + DN A C + V+ P S+
Sbjct: 177 RNDAVLPPKSPDY-TQDGSLTVKTDNITAPSASFGCMAQDNYHDLFPSLVLENDPFFSTL 353
Query: 239 DYLSGLTFDDPEKDVTLSSTLDSHDHLGV 267
S L+ + PE + +S T H+ GV
Sbjct: 354 SQTSSLSANTPESNYFVSPTFLEHEFDGV 440
>TC218342 similar to UP|Q6IEK9 (Q6IEK9) WRKY transcription factor 72, partial
(43%)
Length = 775
Score = 74.3 bits (181), Expect = 6e-14
Identities = 33/59 (55%), Positives = 42/59 (70%)
Frame = +1
Query: 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHT 180
+DG++WRKYGQK + + FPR+YYRCTH QGC KQVQR+ +D + TTY G HT
Sbjct: 247 DDGYRWRKYGQKAVKNNKFPRSYYRCTH---QGCNVKKQVQRLTKDEGVVVTTYEGVHT 414
>AW306487
Length = 247
Score = 72.8 bits (177), Expect = 2e-13
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = +2
Query: 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTC 181
+DG+ WRKYGQ IL + P YYRC + N QGC A KQV + EDP + TY G HTC
Sbjct: 59 DDGYSWRKYGQNDILGSKSP*GYYRCAYGNVQGCLATKQVLKSDEDPMMCEMTYKGMHTC 238
>TC232344 homologue to UP|WR13_ARATH (Q9SVB7) Probable WRKY transcription
factor 13 (WRKY DNA-binding protein 13), partial (21%)
Length = 421
Score = 70.5 bits (171), Expect = 8e-13
Identities = 30/58 (51%), Positives = 41/58 (69%)
Frame = +3
Query: 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHH 179
+DG++WRKYGQK + +T PR+YYRCT N C+ K+V+R+ EDP + TTY G H
Sbjct: 3 DDGYKWRKYGQKVVKNTQHPRSYYRCTQDN---CRVKKRVERLAEDPRMVITTYEGRH 167
>TC227103 similar to UP|WR23_ARATH (O22900) Probable WRKY transcription
factor 23 (WRKY DNA-binding protein 23), partial (36%)
Length = 980
Score = 69.3 bits (168), Expect = 2e-12
Identities = 41/135 (30%), Positives = 65/135 (47%), Gaps = 22/135 (16%)
Frame = +2
Query: 68 LNNNPTSEGSDMQLTKSEDSLESNCKSSIVKE----------RRGCYKRRKISQTWEKES 117
LN+ P + S + S D++ +++ + ++ K+ K +T +K
Sbjct: 422 LNHQPATPNSSSISSASSDAVNDEQNKTLLDQAEEDDDEEEGQQKTKKQLKPKKTNQKRQ 601
Query: 118 EQPE------------EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQ 165
+P EDG++WRKYGQK + ++ FPR+YYRCT C K+V+R
Sbjct: 602 REPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCT---SVSCNVKKRVERSF 772
Query: 166 EDPPLHRTTYSGHHT 180
DP + TTY G HT
Sbjct: 773 TDPSVVVTTYEGQHT 817
>TC211307 homologue to UP|WR57_ARATH (Q9C983) Probable WRKY transcription
factor 57 (WRKY DNA-binding protein 57), partial (29%)
Length = 761
Score = 69.3 bits (168), Expect = 2e-12
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +2
Query: 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHH 179
EDG++WRKYGQK + ++ FPR+YYRCT+ C K+V+R EDP + TTY G H
Sbjct: 17 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSK---CTVKKRVERSSEDPTIVITTYEGQH 181
>TC227101 homologue to UP|WR23_ARATH (O22900) Probable WRKY transcription
factor 23 (WRKY DNA-binding protein 23), partial (31%)
Length = 599
Score = 68.2 bits (165), Expect = 4e-12
Identities = 35/87 (40%), Positives = 47/87 (53%), Gaps = 12/87 (13%)
Frame = +1
Query: 106 RRKISQTWEKESEQPE------------EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQ 153
R K +T +K +P EDG++WRKYGQK + ++ FPR+YYRCT
Sbjct: 31 RLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCT---SV 201
Query: 154 GCKAIKQVQRIQEDPPLHRTTYSGHHT 180
C K+V+R DP + TTY G HT
Sbjct: 202 SCNVKKRVERSFSDPSIVVTTYEGQHT 282
>TC227106 similar to UP|WR23_ARATH (O22900) Probable WRKY transcription
factor 23 (WRKY DNA-binding protein 23), partial (32%)
Length = 783
Score = 67.8 bits (164), Expect = 5e-12
Identities = 37/104 (35%), Positives = 52/104 (49%), Gaps = 12/104 (11%)
Frame = +3
Query: 89 ESNCKSSIVKERRGCYKRRKISQTWEKESEQPE------------EDGHQWRKYGQKKIL 136
E N E + ++ K +T +K +P EDG++WRKYGQK +
Sbjct: 27 EQNKTVDQAPEHQKTKEQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVK 206
Query: 137 HTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHT 180
++ FPR+YYRCT C K+V+R DP + TTY G HT
Sbjct: 207 NSPFPRSYYRCT---SVSCNVKKRVERSFSDPSIVVTTYEGQHT 329
>TC219386 similar to UP|WR24_ARATH (Q9FFS3) Probable WRKY transcription
factor 24 (WRKY DNA-binding protein 24), partial (52%)
Length = 775
Score = 67.8 bits (164), Expect = 5e-12
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +2
Query: 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHH 179
+DG++WRKYGQK + + +PR+YYRCTH C KQVQR+ +D + TTY G H
Sbjct: 350 DDGYRWRKYGQKAVKNNTYPRSYYRCTHHT---CNVKKQVQRLSKDTSIVVTTYEGIH 514
>TC216646 similar to UP|WR41_ARATH (Q8H0Y8) Probable WRKY transcription
factor 41 (WRKY DNA-binding protein 41), partial (17%)
Length = 854
Score = 67.4 bits (163), Expect = 7e-12
Identities = 32/66 (48%), Positives = 39/66 (58%)
Frame = +1
Query: 132 QKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRILQNPEIIV 191
QK IL +PR+YYRCT ++ QGC A KQVQR EDP + TY G+HTC N +
Sbjct: 1 QKDILGAKYPRSYYRCTFRSTQGCWATKQVQRSDEDPTMFDITYRGNHTCSQGNNAVLPP 180
Query: 192 DYPTDH 197
P H
Sbjct: 181 KSPEKH 198
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.314 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,677,403
Number of Sequences: 63676
Number of extensions: 238638
Number of successful extensions: 1132
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of query: 283
length of database: 12,639,632
effective HSP length: 96
effective length of query: 187
effective length of database: 6,526,736
effective search space: 1220499632
effective search space used: 1220499632
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146784.5