TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146784.12 - phase: 0 /pseudo
         (60 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW457987                                                               37  0.002
TC208388 similar to UP|Q8LNZ8 (Q8LNZ8) Abscisic acid insensitive...    25  6.2
TC231917                                                               25  8.1
TC223644 similar to UP|Q947H4 (Q947H4) Non-cell-autonomous prote...    25  8.1
TC205492 similar to UP|Q8H6X3 (Q8H6X3) Thioredoxin h-like protei...    25  8.1

>AW457987 
          Length = 245

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 16/36 (44%), Positives = 22/36 (60%)
 Frame = +1

Query: 5   FRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIY 40
           F E +  +L C SCL   +SF  FDV KL R+ ++Y
Sbjct: 115 FDEDNTKLLQCVSCLSPSSSFEAFDVKKLLRMVELY 222



 Score = 30.0 bits (66), Expect = 0.25
 Identities = 13/31 (41%), Positives = 18/31 (57%)
 Frame = +1

Query: 1  MDHRFRERSNIVLDCFSCLDSKNSFSKFDVD 31
          ++ RF E +  +L C SCL   +SF  FD D
Sbjct: 34 LNARFDEDNTKLLQCVSCLSPSSSFEAFDED 126


>TC208388 similar to UP|Q8LNZ8 (Q8LNZ8) Abscisic acid insensitive 3-like
           factor, partial (42%)
          Length = 1236

 Score = 25.4 bits (54), Expect = 6.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 15  CFSCLDSKNSFSKFDV 30
           CF C  S+ SFS+ DV
Sbjct: 344 CFGCTSSRKSFSQLDV 391


>TC231917 
          Length = 633

 Score = 25.0 bits (53), Expect = 8.1
 Identities = 13/36 (36%), Positives = 18/36 (49%)
 Frame = +3

Query: 17  SCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTI 52
           SC  S+ SFS      L RL +I+  DF   +  T+
Sbjct: 162 SCFFSQGSFSLISYQNLLRLINIF*PDFLSQNLCTV 269


>TC223644 similar to UP|Q947H4 (Q947H4) Non-cell-autonomous protein pathway2,
           partial (24%)
          Length = 404

 Score = 25.0 bits (53), Expect = 8.1
 Identities = 12/32 (37%), Positives = 19/32 (58%)
 Frame = +2

Query: 3   HRFRERSNIVLDCFSCLDSKNSFSKFDVDKLA 34
           HR R+   +   C + L +K SFS F +DK++
Sbjct: 227 HRVRKSLTLQTQC*TWLINKPSFSLFILDKIS 322


>TC205492 similar to UP|Q8H6X3 (Q8H6X3) Thioredoxin h-like protein, partial
           (76%)
          Length = 868

 Score = 25.0 bits (53), Expect = 8.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 16  FSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQL 56
           FS    + S+  FDV + A ++   H+D  + DR     QL
Sbjct: 545 FSIFKKEESWCGFDVPRSAEVS*FIHID**EHDRRVFHGQL 423


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.326    0.141    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,390,036
Number of Sequences: 63676
Number of extensions: 20530
Number of successful extensions: 163
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of query: 60
length of database: 12,639,632
effective HSP length: 36
effective length of query: 24
effective length of database: 10,347,296
effective search space: 248335104
effective search space used: 248335104
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.6 bits)