BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146760.4 + phase: 0
(303 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203404 GmMYB16 217 5e-57
TC217107 homologue to UP|Q7X9I1 (Q7X9I1) MYB transcription facto... 206 8e-54
TC207828 homologue to UP|Q6SL45 (Q6SL45) MYB6, partial (52%) 201 3e-52
BM092559 homologue to GP|13346186|gb GHMYB10 {Gossypium hirsutum... 201 3e-52
TC227045 homologue to UP|Q43525 (Q43525) Transcription factor, p... 200 6e-52
TC229682 UP|Q9XIU9 (Q9XIU9) GmMYB29A2 protein, complete 199 1e-51
TC229681 UP|Q9S7E3 (Q9S7E3) GmMYB29A1 protein, complete 196 1e-50
TC232084 UP|Q84PP2 (Q84PP2) Transcription factor MYB101 (Fragmen... 194 3e-50
TC222952 homologue to UP|Q40173 (Q40173) Myb-related transcripti... 189 1e-48
BE352650 187 5e-48
TC233521 similar to UP|O04140 (O04140) Myb protein, partial (44%) 186 1e-47
TC218770 UP|Q9XIU5 (Q9XIU5) GmMYB29B2 protein, complete 185 2e-47
TC218769 UP|Q9XIU8 (Q9XIU8) GmMYB29A2 protein, complete 183 7e-47
CA783329 homologue to GP|6651292|gb| myb-related transcription f... 182 2e-46
TC211840 homologue to UP|Q8LBF0 (Q8LBF0) Myb-related protein M4,... 182 2e-46
BF425254 homologue to PIR|S26605|S26 myb-related protein 1 - gar... 181 4e-46
BM093788 homologue to GP|13346178|gb| BNLGHi233 {Gossypium hirsu... 180 6e-46
TC232753 GmMYB10 177 7e-45
TC211951 similar to GB|AAS10022.1|41619094|AY519552 MYB transcri... 171 5e-43
BE804803 homologue to GP|13346194|gb GHMYB9 {Gossypium hirsutum}... 171 5e-43
>TC203404 GmMYB16
Length = 1138
Score = 217 bits (553), Expect = 5e-57
Identities = 98/142 (69%), Positives = 118/142 (83%), Gaps = 1/142 (0%)
Frame = +1
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCCSKVGL +GPWT +ED +L++YI+ GEG+W++LPK+AGLLRCGKSCRLRWMNYLRP
Sbjct: 118 PCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPD 297
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGI-DP 152
+KRG IAP+E+DLI+R+H LLGNRWSLIAGR+PGRTDNEIKNYWNTHLSKKL QG D
Sbjct: 298 IKRGNIAPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLKIQGTEDT 477
Query: 153 RTHKPLNNPSSSSSIIPNTNHQ 174
THK L NP ++ N++
Sbjct: 478 DTHKMLENPQEEAASDGGNNNK 543
>TC217107 homologue to UP|Q7X9I1 (Q7X9I1) MYB transcription factor R2R3 type,
partial (68%)
Length = 1058
Score = 206 bits (525), Expect = 8e-54
Identities = 87/138 (63%), Positives = 112/138 (81%)
Frame = +2
Query: 33 TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRP 92
+PCC K +G WT EED+ L YI+ GEG WR+LPK AGLLRCGKSCRLRW+NYLRP
Sbjct: 275 SPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRP 454
Query: 93 SVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDP 152
+KRG +E++LI++LH LLGN+WSLIAGR+PGRTDNEIKNYWNTH+ +KL+N+GIDP
Sbjct: 455 DLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDP 634
Query: 153 RTHKPLNNPSSSSSIIPN 170
TH+PLN ++++++ N
Sbjct: 635 ATHRPLNEAATAATVTTN 688
>TC207828 homologue to UP|Q6SL45 (Q6SL45) MYB6, partial (52%)
Length = 999
Score = 201 bits (511), Expect = 3e-52
Identities = 90/151 (59%), Positives = 115/151 (75%), Gaps = 6/151 (3%)
Frame = +2
Query: 28 KTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWM 87
+T +PCC K +G WT EEDE L YIK GEG WR+LPK AGLLRCGKSCRLRW+
Sbjct: 35 QTMGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWI 214
Query: 88 NYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLIN 147
NYLRP +KRG +E++LI+ LH LLGN+WSLIA R+PGRTDNEIKNYWNTH+ +KL +
Sbjct: 215 NYLRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYS 394
Query: 148 QGIDPRTHKPLNNPSS------SSSIIPNTN 172
+GIDP+TH+PLN S+ +++ +P++N
Sbjct: 395 RGIDPQTHRPLNAASATPATTVTATAVPSSN 487
>BM092559 homologue to GP|13346186|gb GHMYB10 {Gossypium hirsutum}, partial
(38%)
Length = 421
Score = 201 bits (511), Expect = 3e-52
Identities = 87/113 (76%), Positives = 100/113 (87%)
Frame = +2
Query: 33 TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRP 92
+PCCSK GL RG WT ED++L EYI+ GEGRWR LPKRAGL RCGKSCRLRW+NYLRP
Sbjct: 8 SPCCSKEGLNRGAWTAHEDKILREYIRVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRP 187
Query: 93 SVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKL 145
+KRG I+PDEE+LI+RLH+LLGNRWSLIAGR+PGRTDNEIKNYWNT+L KK+
Sbjct: 188 DIKRGNISPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKV 346
>TC227045 homologue to UP|Q43525 (Q43525) Transcription factor, partial (55%)
Length = 560
Score = 200 bits (509), Expect = 6e-52
Identities = 89/146 (60%), Positives = 112/146 (75%), Gaps = 2/146 (1%)
Frame = +3
Query: 33 TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRP 92
+PCC K +G WT EED L YI+ GEG WR+LPK AGLLRCGKSCRLRW+NYLRP
Sbjct: 24 SPCCEKAHTNKGAWTKEEDHRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRP 203
Query: 93 SVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDP 152
+KRG + +E+ LI++LH LLGN+WSLIAGR+PGRTDNEIKNYWNTH+ +KL+++GIDP
Sbjct: 204 DLKRGNFSLEEDQLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDP 383
Query: 153 RTHKPLNNPS--SSSSIIPNTNHQTS 176
TH+PLN+ S +++ HQ S
Sbjct: 384 ATHRPLNDSSHQEPAAVSAPPKHQES 461
>TC229682 UP|Q9XIU9 (Q9XIU9) GmMYB29A2 protein, complete
Length = 1249
Score = 199 bits (506), Expect = 1e-51
Identities = 86/145 (59%), Positives = 109/145 (74%)
Frame = +3
Query: 22 NPNKKQKTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKS 81
+P++ K PCC K+GLK+GPWT EED++L YI+K G G WR LPK AGLLRCGKS
Sbjct: 60 DPHQFLKKMVRAPCCEKMGLKKGPWTPEEDQILMSYIQKHGHGNWRALPKLAGLLRCGKS 239
Query: 82 CRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHL 141
CRLRW+NYLRP +KRG + +EE++I+++H LLGNRWS IA ++PGRTDNEIKN W+THL
Sbjct: 240 CRLRWINYLRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHL 419
Query: 142 SKKLINQGIDPRTHKPLNNPSSSSS 166
K+L+N I R KP S S+S
Sbjct: 420 KKRLLNSDIQKRVSKPRIKRSDSNS 494
>TC229681 UP|Q9S7E3 (Q9S7E3) GmMYB29A1 protein, complete
Length = 795
Score = 196 bits (498), Expect = 1e-50
Identities = 87/151 (57%), Positives = 110/151 (72%)
Frame = +1
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCC K+GLK+GPWT EED++L YI+K G G WR LPK AGLLRCGKSCRLRW+NYLRP
Sbjct: 13 PCCEKMGLKKGPWTPEEDQILMSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLRPD 192
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPR 153
+KRG + +EE++I+++H LLGNRWS IA ++PGRTDNEIKN W+THL K+L+N + R
Sbjct: 193 IKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLMNSDTNKR 372
Query: 154 THKPLNNPSSSSSIIPNTNHQTSTPFFAPSS 184
KP S S+S + TS+ SS
Sbjct: 373 VSKPRIKRSDSNSSTLTQSEPTSSSGCTTSS 465
>TC232084 UP|Q84PP2 (Q84PP2) Transcription factor MYB101 (Fragment), complete
Length = 1383
Score = 194 bits (494), Expect = 3e-50
Identities = 90/193 (46%), Positives = 127/193 (65%)
Frame = +2
Query: 33 TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRP 92
TPC + GLK+GPWT EED +L +YI+K G G WR LPK A L RCGKSCRLRW NYLRP
Sbjct: 62 TPCSDENGLKKGPWTPEEDRILVDYIQKHGHGSWRALPKHARLNRCGKSCRLRWTNYLRP 241
Query: 93 SVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDP 152
+KRG+ + +EE LI+ LH +LGN+WS IAG +PGRTDNEIKN+WNTHL KKL+ G+DP
Sbjct: 242 DIKRGKFSEEEEQLIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQMGLDP 421
Query: 153 RTHKPLNNPSSSSSIIPNTNHQTSTPFFAPSSSDHHHPITITNNEPDPSQTQQAQGCGNL 212
TH+P ++ + S + T+ ++ D ++ + + ++ ++ Q Q ++
Sbjct: 422 VTHRPRSDHLNLLSNLQQLLAATNIVSNLTNTWDTNNALRLQSDATQLAKLQLLQNILHV 601
Query: 213 VNDVSAMDNHHVL 225
+ D + N +L
Sbjct: 602 LGDTTPTSNLDLL 640
>TC222952 homologue to UP|Q40173 (Q40173) Myb-related transcription factor,
partial (47%)
Length = 612
Score = 189 bits (480), Expect = 1e-48
Identities = 90/164 (54%), Positives = 108/164 (64%)
Frame = +2
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCC KVGLK+GPWT EED+ L +I G+ WR +PK AGLLRCGKSCRLRW NYLRP
Sbjct: 137 PCCDKVGLKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPD 316
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPR 153
+KRG ++ EE +++ LH LGNRWS IA +PGRTDNEIKN+WNTH+ KKL GIDP
Sbjct: 317 LKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPV 496
Query: 154 THKPLNNPSSSSSIIPNTNHQTSTPFFAPSSSDHHHPITITNNE 197
THKPL N + T +QT HH P+ N+
Sbjct: 497 THKPLPNATE------QTKNQTK-----QEQQLHHQPVEEEQNQ 595
>BE352650
Length = 528
Score = 187 bits (475), Expect = 5e-48
Identities = 81/126 (64%), Positives = 98/126 (77%), Gaps = 1/126 (0%)
Frame = +1
Query: 33 TPCCSKVG-LKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLR 91
+PCC + +K+GPWT EEDE L +YI K G G WRTLPKRAGL RCGKSCRLRW NYLR
Sbjct: 112 SPCCEESSSVKKGPWTPEEDEKLIDYISKHGHGSWRTLPKRAGLNRCGKSCRLRWTNYLR 291
Query: 92 PSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGID 151
P +KRG+ + D+E +I+ H +LGN+WS IA +PGRTDNEIKNYW TH+ KKL+ GID
Sbjct: 292 PDIKRGKFSEDDERIIINFHSVLGNKWSKIAAHLPGRTDNEIKNYWTTHIRKKLLKMGID 471
Query: 152 PRTHKP 157
P T+KP
Sbjct: 472 PETYKP 489
>TC233521 similar to UP|O04140 (O04140) Myb protein, partial (44%)
Length = 886
Score = 186 bits (472), Expect = 1e-47
Identities = 84/149 (56%), Positives = 110/149 (73%)
Frame = +2
Query: 29 TTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMN 88
T T TPCC ++GLK+GPWT EED++L +I++ G G WR LPK+AGLLRCGKSCRLRW+N
Sbjct: 17 TMTRTPCCERMGLKKGPWTAEEDQILVSHIQRYGHGNWRALPKQAGLLRCGKSCRLRWIN 196
Query: 89 YLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQ 148
YLRP +KRG+ + +EED IL+LH +LGNRWS IA +PGRTDNEIKN+W+THL K++
Sbjct: 197 YLRPDIKRGKFSKEEEDTILKLHGILGNRWSAIAASLPGRTDNEIKNFWHTHL-KRIQKS 373
Query: 149 GIDPRTHKPLNNPSSSSSIIPNTNHQTST 177
G+ +N + SS I+ TS+
Sbjct: 374 GV--------HNGNPSSRILQEAQANTSS 436
>TC218770 UP|Q9XIU5 (Q9XIU5) GmMYB29B2 protein, complete
Length = 1316
Score = 185 bits (470), Expect = 2e-47
Identities = 86/153 (56%), Positives = 111/153 (72%), Gaps = 6/153 (3%)
Frame = +1
Query: 22 NPNKKQKTTTT-TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGK 80
+P K Q T PCC K+GLK+GPW EED++L+ YI+K G G WR LPK+AGLLRCGK
Sbjct: 85 SP*KNQSTKMVRAPCCEKMGLKKGPWATEEDQILTSYIQKHGHGNWRALPKQAGLLRCGK 264
Query: 81 SCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTH 140
SCRLRW+NYLRP +KRG +EE+ I++LH +LGNRWS IA ++PGRTDNEIKN W+T+
Sbjct: 265 SCRLRWINYLRPDIKRGNFTIEEEETIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTN 444
Query: 141 LSKKLI----NQGIDPRTHKP-LNNPSSSSSII 168
L K+L+ ++ R KP + S+SSII
Sbjct: 445 LKKRLLKSDQSKPSSKRATKPKIKRSDSNSSII 543
>TC218769 UP|Q9XIU8 (Q9XIU8) GmMYB29A2 protein, complete
Length = 828
Score = 183 bits (465), Expect = 7e-47
Identities = 91/203 (44%), Positives = 125/203 (60%)
Frame = +1
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCC K+GLK+GPW EED++L+ YI K G G WR LPK+AGLLRCGKSCRLRW+NYLRP
Sbjct: 13 PCCEKMGLKKGPWAPEEDQILTSYIDKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPD 192
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPR 153
+KRG +EE+ I++LH +LGNRWS IA ++PGRTDNEIKN W+T+L K+L+ +
Sbjct: 193 IKRGNFTIEEEETIIKLHDMLGNRWSAIAAKLPGRTDNEIKNVWHTNLKKRLL------K 354
Query: 154 THKPLNNPSSSSSIIPNTNHQTSTPFFAPSSSDHHHPITITNNEPDPSQTQQAQGCGNLV 213
+ + + PSS +I P SD + I IT +EPD ++ +
Sbjct: 355 SDQSKSKPSSKRAIKPKIER-----------SDSNSSI-ITQSEPDNFNFREMDTITSSA 498
Query: 214 NDVSAMDNHHVLTNNNRGDYGDD 236
S+ D V +++ +D
Sbjct: 499 CTTSSSDFSSVTVGDSKNIKSED 567
>CA783329 homologue to GP|6651292|gb| myb-related transcription factor
{Pimpinella brachycarpa}, partial (48%)
Length = 443
Score = 182 bits (461), Expect = 2e-46
Identities = 81/133 (60%), Positives = 100/133 (74%)
Frame = +3
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
P C K+G+K+GPWT EED+ L +I G+ WR +PK AGL RCGKSCRLRW NYLRP
Sbjct: 15 PRCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPD 194
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPR 153
+KRG + EE L++ LH LGNRWS IA R+PGRTDNEIKN+WNTH+ KKL+ GIDP
Sbjct: 195 LKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKIGIDPV 374
Query: 154 THKPLNNPSSSSS 166
TH+PL +++SS
Sbjct: 375 THEPLKKQAAASS 413
>TC211840 homologue to UP|Q8LBF0 (Q8LBF0) Myb-related protein M4, partial
(38%)
Length = 516
Score = 182 bits (461), Expect = 2e-46
Identities = 77/115 (66%), Positives = 94/115 (80%)
Frame = +2
Query: 43 RGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPD 102
+GPWT EED+ L +YI+K G G WRTLPK AGL RCGKSCRLRW NYLRP +KRG+ + +
Sbjct: 2 KGPWTTEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFE 181
Query: 103 EEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRTHKP 157
EE+ I++LH +LGN+WS IA R+PGRTDNEIKNYWNTH+ K+L+ GIDP TH P
Sbjct: 182 EEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 346
>BF425254 homologue to PIR|S26605|S26 myb-related protein 1 - garden petunia,
partial (29%)
Length = 375
Score = 181 bits (459), Expect = 4e-46
Identities = 80/123 (65%), Positives = 92/123 (74%)
Frame = +3
Query: 33 TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRP 92
+PCC KVGLK+GPWT EED+ L YI++ G G WR LP +AGL RCGKSCRLRW NYLRP
Sbjct: 6 SPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRP 185
Query: 93 SVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDP 152
+KRG+ EE I++LH LLGNRWS I+ +P RTDNEIKNYWNTHL K L IDP
Sbjct: 186 DIKRGKFXMQEEQTIIQLHALLGNRWSSISTHLPKRTDNEIKNYWNTHLKKXLNKMSIDP 365
Query: 153 RTH 155
TH
Sbjct: 366 VTH 374
>BM093788 homologue to GP|13346178|gb| BNLGHi233 {Gossypium hirsutum},
partial (34%)
Length = 427
Score = 180 bits (457), Expect = 6e-46
Identities = 85/114 (74%), Positives = 92/114 (80%)
Frame = -1
Query: 5 SSTDQDKSETTNSNSNSNPNKKQKTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEG 64
SST + TT N + + +PCC+KVGLKRGPWT EEDEVL+ YIKKEGEG
Sbjct: 418 SSTTTTAATTTTKTKVKNNSNNNIGSNNSPCCNKVGLKRGPWTPEEDEVLANYIKKEGEG 239
Query: 65 RWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRW 118
RWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRG IAPDEEDLILRLHRLLGNR+
Sbjct: 238 RWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRY 77
>TC232753 GmMYB10
Length = 423
Score = 177 bits (448), Expect = 7e-45
Identities = 79/124 (63%), Positives = 96/124 (76%)
Frame = +2
Query: 35 CCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSV 94
CC K L++G W+ EEDE L YI + G G W ++PK AGL RCGKSCRLRW+NYLRP +
Sbjct: 47 CCVKQKLRKGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 226
Query: 95 KRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRT 154
KRG + EEDLI+ LH +LGNRW+ IA ++PGRTDNEIKN+WN+ L KKL+ QGIDP T
Sbjct: 227 KRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLLKQGIDPST 406
Query: 155 HKPL 158
HKPL
Sbjct: 407 HKPL 418
>TC211951 similar to GB|AAS10022.1|41619094|AY519552 MYB transcription factor
{Arabidopsis thaliana;} , partial (38%)
Length = 776
Score = 171 bits (432), Expect = 5e-43
Identities = 77/125 (61%), Positives = 94/125 (74%)
Frame = +2
Query: 35 CCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSV 94
CC K L++G W+ EEDE L YI K G G W ++PK AGL RCGKSCRLRW+NYLRP +
Sbjct: 107 CCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 286
Query: 95 KRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRT 154
KRG + EE+ I+ LH +LGNRWS IA ++PGRTDNEIKN WN+ L KKL +GIDP T
Sbjct: 287 KRGAFSQQEENSIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNT 466
Query: 155 HKPLN 159
H+PL+
Sbjct: 467 HQPLS 481
>BE804803 homologue to GP|13346194|gb GHMYB9 {Gossypium hirsutum}, partial
(50%)
Length = 421
Score = 171 bits (432), Expect = 5e-43
Identities = 76/125 (60%), Positives = 95/125 (75%)
Frame = +2
Query: 36 CSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVK 95
C K +G WT EED L YI+ GEG WR+LPK AGLLRCGKSCRLRW+NYLRP +K
Sbjct: 2 CEKAHTNKGAWTKEEDHRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLK 181
Query: 96 RGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRTH 155
RG + +E+ LI++LH LLGN ++PGRTDNEIKNYWNTH+ +KL+++GIDP TH
Sbjct: 182 RGNFSLEEDQLIIKLHSLLGN-------KLPGRTDNEIKNYWNTHIRRKLLSRGIDPATH 340
Query: 156 KPLNN 160
+PLN+
Sbjct: 341 RPLND 355
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.311 0.129 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,301,369
Number of Sequences: 63676
Number of extensions: 299831
Number of successful extensions: 2310
Number of sequences better than 10.0: 235
Number of HSP's better than 10.0 without gapping: 2126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2227
length of query: 303
length of database: 12,639,632
effective HSP length: 97
effective length of query: 206
effective length of database: 6,463,060
effective search space: 1331390360
effective search space used: 1331390360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146760.4