TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146758.8 - phase: 0 /pseudo
         (35 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BF595514                                                               58  1e-09
TC232424                                                               58  1e-09
TC233990 similar to UP|Q9LUF7 (Q9LUF7) Emb|CAB86899.1, partial (...    52  9e-08
TC232825 weakly similar to UP|Q98JQ1 (Q98JQ1) Mlr1837 protein, p...    27  3.2

>BF595514 
          Length = 381

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 29/35 (82%), Positives = 31/35 (87%)
 Frame = +1

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISEG 35
           MA RRVDAVLLTD+N LL GIMTDKD ATRVI+EG
Sbjct: 268 MATRRVDAVLLTDSNALLSGIMTDKDIATRVIAEG 372


>TC232424 
          Length = 439

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISEG 35
           MAARR+DAVLLTD+N LL GI+TDKD ATRV++EG
Sbjct: 187 MAARRIDAVLLTDSNALLSGILTDKDVATRVVAEG 291


>TC233990 similar to UP|Q9LUF7 (Q9LUF7) Emb|CAB86899.1, partial (13%)
          Length = 485

 Score = 51.6 bits (122), Expect = 9e-08
 Identities = 25/34 (73%), Positives = 30/34 (87%)
 Frame = +1

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISE 34
           MAARRVDA+LLTD+N LL GI+TDKD A RVI++
Sbjct: 355 MAARRVDALLLTDSNALLCGILTDKDIAARVIAK 456


>TC232825 weakly similar to UP|Q98JQ1 (Q98JQ1) Mlr1837 protein, partial (16%)
          Length = 398

 Score = 26.6 bits (57), Expect = 3.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISE 34
           M A  V  VLL    G  F  M ++D+ TR ISE
Sbjct: 158 MLALLVIGVLLAQVQGPFFSRMFEQDSVTRSISE 259


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.322    0.136    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 682,766
Number of Sequences: 63676
Number of extensions: 2186
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 35
length of database: 12,639,632
effective HSP length: 11
effective length of query: 24
effective length of database: 11,939,196
effective search space: 286540704
effective search space used: 286540704
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)