TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146758.5 - phase: 0 /pseudo
         (1461 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CF922015                                                               39  0.013
BU549069                                                               36  0.14
CF922488                                                               33  0.71
TC220413 similar to UP|Q9LF51 (Q9LF51) Glutamine-rich protein, p...    33  1.2
BU544694 weakly similar to GP|13676773|gb PF6 protein {Chlamydom...    32  1.6
TC216038 similar to UP|Q9IZF4 (Q9IZF4) Aphid transmission P5, pa...    32  2.1
BF069151                                                               32  2.7
TC224903 similar to GB|AAS75312.1|45680886|AY568529 multidomain ...    32  2.7
TC216039 similar to UP|P93273 (P93273) PAFD103 protein (Fragment...    31  3.5
BU965513                                                               31  3.5
TC232672 similar to UP|Q9LVA8 (Q9LVA8) Gb|AAB82627.1 (At5g62280)...    31  3.5
TC222021 similar to UP|Q7PIJ0 (Q7PIJ0) ENSANGP00000024416 (Fragm...    30  6.0
CA853226 GP|6166261|gb| cytochrome oxidase I {Agapostemon serice...    30  7.8
TC206319 similar to UP|Q9Y0C9 (Q9Y0C9) Ras interacting protein R...    30  7.8

>CF922015 
          Length = 172

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 25/52 (48%), Positives = 30/52 (57%)
 Frame = -2

Query: 40  VGDVHEEEPSDLQRTL*P*WSPDVA*GD*EDLPGYAVHGGSESAIWYSSAGR 91
           V  + EE+P+   R L* *    +A GD*EDLPG  V G SE  + YS A R
Sbjct: 165 VRSLSEEQPTYF*RGL*S*GC*GLAEGD*EDLPGDGVSGPSEGVVCYSHASR 10


>BU549069 
          Length = 615

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 36/106 (33%), Positives = 44/106 (40%)
 Frame = -2

Query: 1351 RYWKELERWLTEWVYRRIFRICTTFSMCRNFESMFRIHLM*FRVTMCKLETTLR*RLYR* 1410
            ++ KE   W T+  Y   F I T   MC N   +  IHLM       K + T   + Y *
Sbjct: 536  KFLKEPVLWHTKLHYPHHFLIFTMSFMCLNSVCISMIHLMWSNWMTYK*KRT*HMKHYH* 357

Query: 1411 GLMIVK*RR*EARRYLS*ESFGRERLVKA*RGSLRVRCWSLIQNCL 1456
            G  I +   *E RR       G     K  RG+ RVRC   I  CL
Sbjct: 356  GSRIEEQST*EGRRIHWLR*SGEVHQEKMPRGN*RVRCE*PIHLCL 219


>CF922488 
          Length = 741

 Score = 33.5 bits (75), Expect = 0.71
 Identities = 27/78 (34%), Positives = 38/78 (48%)
 Frame = +1

Query: 574 RKMVVCGCVLIIGS*TR*LSRIGIHFRELMI*WIS*WVHEFSARLI*DQVITRLK*KMKI 633
           ++M  C C   I  *T+ + RI   +R     WI+  V   S   +  QVITR +*  +I
Sbjct: 10  KRMGRCECAWTIEI*TKPVQRISFLYRISTFSWITRPVFPNSPSWMDFQVITR*R*HQRI 189

Query: 634 CRRQLSERVMVTMNIKLC 651
            +RQLS        I+LC
Sbjct: 190 WKRQLSLLYGEPSAIRLC 243


>TC220413 similar to UP|Q9LF51 (Q9LF51) Glutamine-rich protein, partial (31%)
          Length = 761

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -1

Query: 10  CCVSCCSTSCCPSCGTTT*RKCWC 33
           CC  CCS SCC  C       CWC
Sbjct: 335 CCCCCCSRSCCCCCCCCC---CWC 273


>BU544694 weakly similar to GP|13676773|gb PF6 protein {Chlamydomonas
           reinhardtii}, partial (0%)
          Length = 500

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 9/22 (40%), Positives = 16/22 (71%)
 Frame = -1

Query: 353 CYY*YWCYALFYCFRLCFCFGS 374
           C++  WC+  ++C+  C+CFGS
Sbjct: 236 CWFWSWCFGWWWCWWWCWCFGS 171


>TC216038 similar to UP|Q9IZF4 (Q9IZF4) Aphid transmission P5, partial (3%)
          Length = 1754

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 10   CCVSCCSTSCCPSCGTTT*RKCWCER 35
            CC SCCS  CC  C     + C C++
Sbjct: 1325 CCKSCCSRGCCKEC-----KACCCKK 1387


>BF069151 
          Length = 380

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 358 WCYALFYCFRLCFCFGSCF 376
           WCY   +C R CFC   CF
Sbjct: 126 WCYCPIFCRRECFCDSCCF 182


>TC224903 similar to GB|AAS75312.1|45680886|AY568529 multidomain cyclophilin
           type peptidyl-prolyl cis-trans isomerase {Arabidopsis
           thaliana;} , partial (13%)
          Length = 817

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 22/49 (44%), Positives = 28/49 (56%), Gaps = 5/49 (10%)
 Frame = -3

Query: 346 Y**YSFSC----YY*YWCYA-LFYCFRLCFCFGSCFV*YEWRDGCRNSS 389
           Y* +S SC    +Y*++ ++ L   F  CFC  SC  *  WRD C NSS
Sbjct: 635 Y*HFSHSCLSQGFY*HFSHSCLSLGFY*CFCLDSC--*CFWRDFCSNSS 495


>TC216039 similar to UP|P93273 (P93273) PAFD103 protein (Fragment), partial
           (36%)
          Length = 534

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 10  CCVSCCSTSCCPSCGTTT*RKCWCE 34
           CC SCCS  CC  C     + C C+
Sbjct: 173 CCKSCCSRGCCKEC-----KACCCK 232


>BU965513 
          Length = 452

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 11/24 (45%), Positives = 12/24 (49%)
 Frame = -3

Query: 10  CCVSCCSTSCCPSCGTTT*RKCWC 33
           CC  CC   CC  CG    R+C C
Sbjct: 444 CCCCCCCCCCCCGCGR---RRCCC 382


>TC232672 similar to UP|Q9LVA8 (Q9LVA8) Gb|AAB82627.1 (At5g62280), partial
           (40%)
          Length = 895

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = +2

Query: 1   NLGNGWKKRCCVSCCSTSCCPSCGTTT*RKCWCER 35
           N   G +  CC    STSC   C T     CWC R
Sbjct: 149 NGSKGQRACCCRVHISTSCWQQCTTNGCGMCWCSR 253


>TC222021 similar to UP|Q7PIJ0 (Q7PIJ0) ENSANGP00000024416 (Fragment),
           partial (10%)
          Length = 773

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = +3

Query: 342 RYLLY**YS----FSCYY*YWCYALFYCFRLCFC 371
           + LL **Y+    F+ +Y Y+CY LF+ F   FC
Sbjct: 543 KILLL**YTLL*VFNYFYYYYCYLLFFFFTFXFC 644


>CA853226 GP|6166261|gb| cytochrome oxidase I {Agapostemon sericeus}, partial
           (3%)
          Length = 562

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 18/41 (43%), Positives = 20/41 (47%), Gaps = 9/41 (21%)
 Frame = +1

Query: 349 YSFSCYY*YW------CYALFYCFR---LCFCFGSCFV*YE 380
           Y+ SC   YW      C   F CF    L F +GSCFV YE
Sbjct: 208 YNVSCVSFYWLPLSSICLLAFVCFIARWL*FNYGSCFVVYE 330


>TC206319 similar to UP|Q9Y0C9 (Q9Y0C9) Ras interacting protein RIPA, partial
           (5%)
          Length = 1428

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 10  CCVSCCSTSCCPSCGTTT*RKCWC 33
           CC  CC   CC  C +     CWC
Sbjct: 793 CCCCCCCNCCCICCWSC--NCCWC 728


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.371    0.167    0.662 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,812,110
Number of Sequences: 63676
Number of extensions: 1274581
Number of successful extensions: 21087
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8406
Number of HSP's successfully gapped in prelim test: 752
Number of HSP's that attempted gapping in prelim test: 10581
Number of HSP's gapped (non-prelim): 11532
length of query: 1461
length of database: 12,639,632
effective HSP length: 109
effective length of query: 1352
effective length of database: 5,698,948
effective search space: 7704977696
effective search space used: 7704977696
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 65 (29.6 bits)