TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146757.12 + phase: 0 /partial
         (192 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC214657 similar to UP|Q9XGV6 (Q9XGV6) Bacterial-induced peroxid...   197  3e-51
TC231994 weakly similar to UP|Q9FLV6 (Q9FLV6) Emb|CAB61996.1, pa...    36  0.010
CO984545                                                               36  0.013
TC228846 similar to UP|Q9LMV4 (Q9LMV4) F5M15.23, partial (6%)          30  0.69
TC221112 weakly similar to GB|AAA30742.1|163635|BOVPROTA protami...    27  4.5
AW203241                                                               27  4.5

>TC214657 similar to UP|Q9XGV6 (Q9XGV6) Bacterial-induced peroxidase precursor 
            , partial (72%)
          Length = 1750

 Score =  197 bits (500), Expect = 3e-51
 Identities = 96/132 (72%), Positives = 111/132 (83%)
 Frame = -3

Query: 61   RSCTFIDGHGGTFDVNIEDLGTSKADLLAPFSAKLIDGINQSEARRRALVLLCFVYMNTN 120
            RSCTF+DG GGTFDV++EDL TS+AD LA    K++DGINQSEARR AL+L CFVY + N
Sbjct: 1547 RSCTFVDGLGGTFDVDVEDLETSRADPLA----KIVDGINQSEARRTALMLFCFVYKDAN 1380

Query: 121  AKDAYVTSVDRKGFDVLAKVTGPVSKDGVGQYQWKELRFMFEQEANDVETFCQHLVQMEE 180
            AKDAY+TS+DRKGFDVLAKV+ PV KDG+  YQWKE RFMF++EANDVE FC  LV+MEE
Sbjct: 1379 AKDAYITSIDRKGFDVLAKVSSPVLKDGIDGYQWKEFRFMFKEEANDVEMFCSQLVEMEE 1200

Query: 181  EVIKKVSASSGL 192
            EVI KVS SSGL
Sbjct: 1199 EVINKVSTSSGL 1164


>TC231994 weakly similar to UP|Q9FLV6 (Q9FLV6) Emb|CAB61996.1, partial (29%)
          Length = 891

 Score = 36.2 bits (82), Expect = 0.010
 Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
 Frame = +1

Query: 31  SSGGSSTSRSDNLQKLLEVTEKYSVYRFKTRSCTFIDGHGGTFDVNIEDLGTSKADLLAP 90
           SSG ++  + +N +  +  + + S Y+ +          G    + +ED   ++ D++A 
Sbjct: 31  SSGDNAAQQVENNENSVXXSCETSFYKLEMIKIQVFSAQGQPTALELEDYMNAQPDIIAH 210

Query: 91  FSAKLIDGIN-QSEARRRALVLLCFVYMNTNAKDAYVTSVDRKGFDV 136
              K+I  +    E    AL  LC+       ++A +  +D  GFDV
Sbjct: 211 SXXKIISRLKADGEKTLEALKSLCWRCKGIQVEEAQLICLDSLGFDV 351


>CO984545 
          Length = 798

 Score = 35.8 bits (81), Expect = 0.013
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = -2

Query: 31  SSGGSSTSRSDNLQKLLEVTEKYSVYRFKTRSCTFIDGHGGTFDVNIEDLGTSKADLLAP 90
           SSG ++  + +N +  +  + + S Y+ +          G    + +ED   ++ D++A 
Sbjct: 662 SSGDNAAQQVENNENSVIPSCETSFYKLEMIKIQVFSAQGQPTALELEDYMNAQPDIIAH 483

Query: 91  FSAKLIDGIN-QSEARRRALVLLCFVYMNTNAKDAYVTSVDRKGFDV 136
            ++K+I  +    E    AL  LC+       ++A +  +D  GFDV
Sbjct: 482 SASKIISRLKADGEKTLEALKSLCWRCKGIQVEEAQLICLDSLGFDV 342


>TC228846 similar to UP|Q9LMV4 (Q9LMV4) F5M15.23, partial (6%)
          Length = 645

 Score = 30.0 bits (66), Expect = 0.69
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +2

Query: 12  IRSEEKATRKFSYTVSG---VLSSGGSSTSRSDNLQKLLEVTEKYSVYRFKT 60
           +RS +    K + T SG   VLS   S+TSR+ + +KLL++    S+  F T
Sbjct: 284 VRSTKSMASKKTSTPSGSTTVLSPTASTTSRTTSFEKLLKIPPASSLLAFAT 439


>TC221112 weakly similar to GB|AAA30742.1|163635|BOVPROTA protamine {Bos
           taurus;} , partial (43%)
          Length = 814

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 16/46 (34%), Positives = 24/46 (51%), Gaps = 10/46 (21%)
 Frame = -1

Query: 121 AKDAYVTSVDRKGFDVLAKV----------TGPVSKDGVGQYQWKE 156
           AK   VT+  R+G  + + V           GP +K+G+G Y+WKE
Sbjct: 373 AKAIPVTTATRRGRTLCSFVETTP*RATFWAGPSTKNGLGIYKWKE 236


>AW203241 
          Length = 401

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = +3

Query: 4   LTEKVHEVIRSEEKATRKFSYTVSGVLSSGGSSTSRSDNLQKLLEVTEKYSVYRFKTRSC 63
           LT    +VIR + KAT KF       L + G         + L       S Y F  +SC
Sbjct: 192 LTNNRIDVIRRKRKATEKFLKKDIADLLANGLDDRAYGRAEGLFVELTLSSCYDFVEQSC 371

Query: 64  TFIDGH 69
            F+  H
Sbjct: 372 DFVLKH 389


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.316    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,872,972
Number of Sequences: 63676
Number of extensions: 71896
Number of successful extensions: 304
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of query: 192
length of database: 12,639,632
effective HSP length: 92
effective length of query: 100
effective length of database: 6,781,440
effective search space: 678144000
effective search space used: 678144000
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)