BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146756.6 - phase: 0
(281 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC228148 similar to UP|Q7YXC8 (Q7YXC8) C. elegans GRD-1 protein ... 344 2e-95
TC228149 similar to UP|O02402 (O02402) Insoluble protein, partia... 320 3e-88
TC217547 weakly similar to UP|Q61869 (Q61869) Keratin 2 epidermi... 52 4e-07
TC208501 similar to GB|AAN31116.1|23506209|AY149962 At3g06130/F2... 46 2e-05
CK605837 44 8e-05
BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvo... 43 1e-04
CF921965 42 2e-04
TC217546 weakly similar to UP|Q9GZC7 (Q9GZC7) RNA binding protei... 41 7e-04
TC211111 homologue to UP|EBN2_EBV (P12978) EBNA-2 nuclear protei... 41 7e-04
TC218632 similar to UP|GRP1_PHAVU (P10495) Glycine-rich cell wal... 40 0.001
CK605828 40 0.001
TC222801 weakly similar to UP|O23370 (O23370) Cell wall protein ... 40 0.001
CK606635 40 0.001
TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 40 0.001
TC232041 similar to UP|Q91TR1 (Q91TR1) T32, partial (3%) 40 0.001
TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 40 0.002
TC204097 homologue to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-bindin... 40 0.002
TC219729 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 40 0.002
TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 39 0.003
CA783317 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 37 0.010
>TC228148 similar to UP|Q7YXC8 (Q7YXC8) C. elegans GRD-1 protein
(Corresponding sequence R08B4.1b), partial (3%)
Length = 1180
Score = 344 bits (883), Expect = 2e-95
Identities = 199/282 (70%), Positives = 223/282 (78%), Gaps = 17/282 (6%)
Frame = +3
Query: 17 DSLPPNTPLSRPDSL-SKHKP--PILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKERP 73
DSLPPN L++PDSL SK+K PILVCRKRSS+ KPS+ TF KGD +P NDKKERP
Sbjct: 3 DSLPPNASLAKPDSLISKNKASGPILVCRKRSSMLAKPSSATFGQKGD-QPTFNDKKERP 179
Query: 74 SSDVKPTLKPSYSETDEEEPPKAKEKPVTGARS-RRSNKNLSSNASNKKPPSNSTPRTGS 132
SSD KP +KPS S+TDEEE PKAKEKPVTGARS RRS KNL++N +NKKP SNSTP+TGS
Sbjct: 180 SSDAKPPMKPSSSDTDEEELPKAKEKPVTGARSLRRSYKNLNNN-NNKKPSSNSTPKTGS 356
Query: 133 SANKPAETPK-LKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSG-------GGGG 184
S NKP+ET K K+KAEG DKK+ N AA FL RIK+N S E + GSG GGGG
Sbjct: 357 SGNKPSETVKPEKSKAEGGPDKKR-NAAADFLKRIKRNTSAEASKGGSGGSGGGGSGGGG 533
Query: 185 SSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYND-GGGSGSGDKRN-KNIESN-- 240
S SS GGGGG KEQKK+VNNGKG+KGKERASR+N+ GGGSGSGDKRN KN+E+N
Sbjct: 534 GSSSSSKGGGGGNGVKEQKKMVNNGKGDKGKERASRHNNVGGGSGSGDKRNSKNVENNSQ 713
Query: 241 SKRNVGRPPKKAAETVA-STKRGRESSASGGKDKRPKKRSKK 281
SKR+VGRPPKKAAET A S KRGRESSAS GKDKRPKKRSKK
Sbjct: 714 SKRSVGRPPKKAAETNAGSAKRGRESSASAGKDKRPKKRSKK 839
>TC228149 similar to UP|O02402 (O02402) Insoluble protein, partial (4%)
Length = 1008
Score = 320 bits (821), Expect = 3e-88
Identities = 185/267 (69%), Positives = 208/267 (77%), Gaps = 17/267 (6%)
Frame = -2
Query: 32 SKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEE 91
+K PILVCRKRSS+ KPS+ TF KGD +P+ NDKKERPSSD KP +KPS S+TDEE
Sbjct: 1007 NKASGPILVCRKRSSMSSKPSSATFGQKGD-QPVFNDKKERPSSDAKPPMKPSSSDTDEE 831
Query: 92 EPPKAKEKPVTGARS-RRSNKNLSSNASN---KKPPSNSTPRTGSSANKPAETPKL-KNK 146
E PKAKEKPVTGARS RRSNKNL+SN+SN KKP S STP+ GSS NKP+ET K K+K
Sbjct: 830 ELPKAKEKPVTGARSLRRSNKNLNSNSSNNNNKKPSSISTPKAGSSWNKPSETVKPEKSK 651
Query: 147 AEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGG-------GGSSGSSKGGGGGGTNT 199
AEG +DKK++ AA FL RIK+N S E + GSGGG GG S SS GGGGG
Sbjct: 650 AEGGADKKRS-AAADFLKRIKRNTSAEASKGGSGGGSGGGGGGGGGSSSSSKGGGGGNGA 474
Query: 200 KEQKKVVNNGKGEKGKERASRYND-GGGSGSGDKR-NKNIE--SNSKRNVGRPPKKAAET 255
KEQKK+VNNGKG+KGKERASR+N+ GGGSGS DKR NKNIE S SKR+VGRPPKKAAET
Sbjct: 473 KEQKKMVNNGKGDKGKERASRHNNVGGGSGSADKRNNKNIENSSQSKRSVGRPPKKAAET 294
Query: 256 VA-STKRGRESSASGGKDKRPKKRSKK 281
A S KRGRE+SAS GKDKRPKKRSKK
Sbjct: 293 NAGSAKRGRENSASAGKDKRPKKRSKK 213
>TC217547 weakly similar to UP|Q61869 (Q61869) Keratin 2 epidermis, partial
(8%)
Length = 700
Score = 51.6 bits (122), Expect = 4e-07
Identities = 57/211 (27%), Positives = 83/211 (39%), Gaps = 7/211 (3%)
Frame = +1
Query: 68 DKKERPSSDVKPTLKPSYSET-DEEEPPKAKEKPVTGARSRR------SNKNLSSNASNK 120
D+ +R S+ T + Y +++E P +P G R R S N N++N+
Sbjct: 1 DRGDRSSTPGSRTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGRGSYNNRGDNSNNE 180
Query: 121 KPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSG 180
+ S R GS+ K ++ +G+S+ GA +++ + E G G
Sbjct: 181 RQDSGYGGRWGSNNTKDSD--------DGLSNFP---GA-----KVQNSPGREAFPGGWG 312
Query: 181 GGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESN 240
GGGGS G S G GGGG N G G + GG+G D
Sbjct: 313 GGGGSGGGSSGWGGGGGGASNSD---NGGWGGQA---------SGGAGPSD------GEQ 438
Query: 241 SKRNVGRPPKKAAETVASTKRGRESSASGGK 271
G PKKAA + G S SGG+
Sbjct: 439 GSSGWGSAPKKAA-----SGNGWGSGNSGGR 516
>TC208501 similar to GB|AAN31116.1|23506209|AY149962 At3g06130/F28L1_7
{Arabidopsis thaliana;} , partial (26%)
Length = 1081
Score = 45.8 bits (107), Expect = 2e-05
Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 1/150 (0%)
Frame = +3
Query: 121 KPPSNSTPR-TGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGS 179
KPP S P G+ + K G ++ KK G +G ++ V + G+
Sbjct: 252 KPPIGSVPMGNGAQMMSNSMMNAQKGGNGGGNNGKKGGGGSGGPVPVQ----VHNMGGGN 419
Query: 180 GGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIES 239
G G+ G +GGGGG T+ N GK G N+ G G N N
Sbjct: 420 EGKNGNGGKKEGGGGGNNQTQGGGNKNNGGKNGGGVPEGKNGNNKNNGGGGGIPNNNGNG 599
Query: 240 NSKRNVGRPPKKAAETVASTKRGRESSASG 269
K N G A + G S G
Sbjct: 600 GKKGNNGMAEGVQAMNMFPNMGGHNPSLVG 689
Score = 30.8 bits (68), Expect = 0.72
Identities = 33/148 (22%), Positives = 55/148 (36%), Gaps = 13/148 (8%)
Frame = +3
Query: 92 EPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETP---KLKNKAE 148
+PP + P+ + +S++ N + N G + P ++ N
Sbjct: 234 KPPMGAKPPIGSVPMGNGAQMMSNSMMNAQKGGNGGGNNGKKGGGGSGGPVPVQVHNMGG 413
Query: 149 GVSDKK----KNNGAAGFLNRIKKNESVEVLRSGSGGGG------GSSGSSKGGGGGGTN 198
G K K G G N+ + + G GGG G++ ++ GGGG N
Sbjct: 414 GNEGKNGNGGKKEGGGGGNNQTQGGGNKN--NGGKNGGGVPEGKNGNNKNNGGGGGIPNN 587
Query: 199 TKEQKKVVNNGKGEKGKERASRYNDGGG 226
K NNG E G + + + + GG
Sbjct: 588 NGNGGKKGNNGMAE-GVQAMNMFPNMGG 668
>CK605837
Length = 498
Score = 43.9 bits (102), Expect = 8e-05
Identities = 35/136 (25%), Positives = 53/136 (38%)
Frame = +2
Query: 135 NKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGG 194
NK + K K K + KKK + KK + + + GG +G G
Sbjct: 59 NKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRSPGGNPEKKKEIRGPRG 238
Query: 195 GGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAE 254
G K Q+ +G+ +KG ++ GG +G R +N G PPK +
Sbjct: 239 GKKREKPQRGGRKSGRIQKGPQKR-----GGKTGQKGFRGEN---------GNPPKIPKK 376
Query: 255 TVASTKRGRESSASGG 270
A K+G+ A GG
Sbjct: 377 KEAERKKGKPGGAKGG 424
Score = 38.5 bits (88), Expect = 0.003
Identities = 38/156 (24%), Positives = 53/156 (33%)
Frame = +3
Query: 80 TLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAE 139
T K + +++ K K+K + ++ K KK P TP+ P
Sbjct: 60 TKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKGPRGGTPKKKRKFGAPGG 239
Query: 140 TPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNT 199
K K+ G G G R K GGG G K G GG
Sbjct: 240 AKKGKSPKGG-------EGKVGEFKRAPKK------------GGGKRG--KRGSGG---- 344
Query: 200 KEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNK 235
K+V K +K K+R + + GG G NK
Sbjct: 345 ----KMVTRQKFQKKKKRKEKRENRGGPKGGANPNK 440
Score = 35.0 bits (79), Expect = 0.038
Identities = 33/134 (24%), Positives = 51/134 (37%), Gaps = 8/134 (5%)
Frame = +1
Query: 70 KERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPR 129
K++ K K + +++ K K+K + ++ K + KK NS P
Sbjct: 58 KQKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKVPGGEPRKKK-GNSGPP 234
Query: 130 TGSSANKPAETPKLK-NKAEGVSDKKKNNGAAGF-------LNRIKKNESVEVLRSGSGG 181
G K + K K ++G K NGA G KK S + + G G
Sbjct: 235 GGQKKGKAPKGGKEKWENSKGPPKKGGENGAKGVPGGKW*PAKNSKKKRSGK--KKGKTG 408
Query: 182 GGGSSGSSKGGGGG 195
GG G ++ GGG
Sbjct: 409 GGQRGGQTQINGGG 450
>BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvox carteri f.
nagariensis}, partial (25%)
Length = 407
Score = 43.1 bits (100), Expect = 1e-04
Identities = 23/58 (39%), Positives = 25/58 (42%)
Frame = +1
Query: 173 EVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
EV G GGGGG G GGGGGG + + G G G GGG G G
Sbjct: 10 EVCPGGGGGGGGGGGGGGGGGGGGGGGRGGEGGGGGGGGGGGGGGGGGEGGGGGGGGG 183
Score = 41.6 bits (96), Expect = 4e-04
Identities = 20/51 (39%), Positives = 24/51 (46%)
Frame = +2
Query: 180 GGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
GGGGG G GGGGGG + ++ G+G G GGG G G
Sbjct: 161 GGGGGGGGGGGGGGGGGGFFRGERXXGRGGRGGGGGGGGGGGGGGGGGGGG 313
Score = 41.6 bits (96), Expect = 4e-04
Identities = 22/53 (41%), Positives = 24/53 (44%)
Frame = +2
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G GGGGG G GGGGGG +GE+ R R GGG G G
Sbjct: 152 GKGGGGGGGGGGGGGGGGGGGF---------FRGERXXGRGGRGGGGGGGGGG 283
Score = 41.2 bits (95), Expect = 5e-04
Identities = 24/53 (45%), Positives = 26/53 (48%)
Frame = +1
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G GGGGG G GGGGGG V G GE+ +E R GGG G G
Sbjct: 151 GEGGGGGGGGGGGGGGGGGGG-------VF*G-GERXREGGERGGGGGGGGGG 285
Score = 40.4 bits (93), Expect = 0.001
Identities = 22/53 (41%), Positives = 22/53 (41%)
Frame = +1
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G GGGGG G GGGGGG E G G G GGG G G
Sbjct: 31 GGGGGGGGGGGGGGGGGGGGRGGEGGGGGGGGGGGGGGGGGEGGGGGGGGGGG 189
Score = 40.4 bits (93), Expect = 0.001
Identities = 21/53 (39%), Positives = 22/53 (40%)
Frame = +1
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G GGGGG G GGGGGG + G G G GGG G G
Sbjct: 28 GGGGGGGGGGGGGGGGGGGGGRGGEGGGGGGGGGGGGGGGGGEGGGGGGGGGG 186
Score = 40.0 bits (92), Expect = 0.001
Identities = 23/60 (38%), Positives = 26/60 (43%)
Frame = +2
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNK 235
R G GGGGG G GGGGGG + G G G GGG G G +R +
Sbjct: 242 RGGRGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGG---------GGGGGRGGRREE 394
Score = 39.7 bits (91), Expect = 0.002
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = +3
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
R G GGGGG G GGGGG +E G G +G GGG G G
Sbjct: 156 RGGGGGGGGGGGGGGGGGGGFLGGRE-----XXGGGGEGGGGGGGGGGGGGGGXG 305
Score = 38.5 bits (88), Expect = 0.003
Identities = 20/53 (37%), Positives = 22/53 (40%)
Frame = +3
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G GGGGG G GGGGGG ++ G G GGG G G
Sbjct: 153 GRGGGGGGGGGGGGGGGGGGGFLGGREXXGGGGEGGGGGGGGGGGGGGGXGGG 311
Score = 38.1 bits (87), Expect = 0.004
Identities = 20/53 (37%), Positives = 22/53 (40%)
Frame = +1
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G GGGG G GGGGGG + +G ER GGG G G
Sbjct: 136 GGGGGGEGGGGGGGGGGGGGGGGGGGVF*GGERXREGGERGGGGGGGGGGGGG 294
Score = 37.4 bits (85), Expect = 0.008
Identities = 26/76 (34%), Positives = 27/76 (35%)
Frame = +3
Query: 158 GAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKER 217
G GFL E G GGGG G GGGGG G+GE G
Sbjct: 204 GGGGFLG------GREXXGGGGEGGGGGGGGGGGGGGGXGGG-------GGGRGEGGGGG 344
Query: 218 ASRYNDGGGSGSGDKR 233
GGG G G R
Sbjct: 345 GGGGGGGGGGGEGGGR 392
Score = 37.0 bits (84), Expect = 0.010
Identities = 22/53 (41%), Positives = 22/53 (41%)
Frame = +1
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSG 228
R G GGGGG G G GGGG G G G E R GGG G
Sbjct: 253 RGGGGGGGGGGGGGGGXGGGGGGGGRGGGGGGGGGGGGGGE--GREEGGGGGG 405
Score = 37.0 bits (84), Expect = 0.010
Identities = 21/53 (39%), Positives = 23/53 (42%)
Frame = +3
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G GGGGG G GGGGGG G G+E +GGG G G
Sbjct: 126 GGGGGGGGGGRGGGGGGGGGGGGGGG---GGGGFLGGREXXGGGGEGGGGGGG 275
Score = 36.6 bits (83), Expect = 0.013
Identities = 22/63 (34%), Positives = 24/63 (37%)
Frame = +1
Query: 173 EVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDK 232
E R G GGG G GGGGGG G G G GGG G G+
Sbjct: 229 ERXREGGERGGGGGGGGGGGGGGGX----------GGGGGGGGRGGGGGGGGGGGGGGEG 378
Query: 233 RNK 235
R +
Sbjct: 379 REE 387
Score = 32.7 bits (73), Expect = 0.19
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +3
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G G GG G GGGGGG G G G E GGG G G
Sbjct: 6 GRGLPGGGGGGGGGGGGGG----------GGGGGGGGGEGGGGGGGGGGGGGG 134
Score = 31.6 bits (70), Expect = 0.42
Identities = 19/51 (37%), Positives = 20/51 (38%)
Frame = +1
Query: 180 GGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
GGG G GGGGGG G G G R +GGG G G
Sbjct: 1 GGGEVCPGGGGGGGGGG----------GGGGGGGGGGGGGRGGEGGGGGGG 123
Score = 27.7 bits (60), Expect = 6.1
Identities = 18/51 (35%), Positives = 19/51 (36%)
Frame = +2
Query: 180 GGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
GG + G GGGGGG G G G R GGG G G
Sbjct: 2 GGERFARGGGGGGGGGGGGG-------GGGGGGGGGGGGGRGGGGGGGGGG 133
>CF921965
Length = 486
Score = 42.4 bits (98), Expect = 2e-04
Identities = 37/118 (31%), Positives = 43/118 (36%), Gaps = 17/118 (14%)
Frame = +1
Query: 111 KNLSSNASNKKPPSNSTPRTGSSANKP--------AETPKLKNKAEGVSDKKKNNGAAGF 162
KNL+ N K PP TP K P K K G KKK GA G
Sbjct: 136 KNLTPNPFKKNPPPKKTPGPPQGEKKTLFKKKKGGGGAPL*KKKNRGGGGKKKGGGAPGG 315
Query: 163 LNRI---------KKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKG 211
+ KK+ + + GGGGG G GGGG N K+ GKG
Sbjct: 316 HQKKIFGMGPQKGKKSFPPKTPKK-RGGGGGKKPPPGGLGGGGENFKQPPPKGPGGKG 486
Score = 29.6 bits (65), Expect = 1.6
Identities = 23/59 (38%), Positives = 24/59 (39%), Gaps = 10/59 (16%)
Frame = +3
Query: 180 GGGGG--------SSGSSKGGGGGGTNTKEQKKVVNNG--KGEKGKERASRYNDGGGSG 228
GGGGG G K GGGG KK NG KGEK + GGG G
Sbjct: 234 GGGGGPPLKKKKPGGGGKKKGGGGPRG--PPKKNFRNGAPKGEKKFSPKNPQKKGGGGG 404
>TC217546 weakly similar to UP|Q9GZC7 (Q9GZC7) RNA binding protein RGGm,
partial (10%)
Length = 1047
Score = 40.8 bits (94), Expect = 7e-04
Identities = 43/172 (25%), Positives = 66/172 (38%), Gaps = 9/172 (5%)
Frame = +1
Query: 68 DKKERPSSDVKPTLKPSYSET-DEEEPPKAKEKPVTGARSRR----SNKNLSSNASNKKP 122
D+ +R S+ T + Y +++E P +P G R R S N N++N++
Sbjct: 34 DRGDRSSTPGSKTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGSYNNRGDNSNNERQ 213
Query: 123 PSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGG 182
S R GS+ K ++ V + G GSGGG
Sbjct: 214 DSGYGGRWGSNNTKDSDDGLSNFPGAKVQNSPGREAFPGGWGG-----------GGSGGG 360
Query: 183 GGSSGSSKG----GGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G S+ + G GG G + EQ ++G G K+ AS G G+ G
Sbjct: 361 GASNSDNGGWEQASGGAGPSDGEQG---SSGWGSATKKAASGNGWGSGNSGG 507
>TC211111 homologue to UP|EBN2_EBV (P12978) EBNA-2 nuclear protein, partial
(5%)
Length = 769
Score = 40.8 bits (94), Expect = 7e-04
Identities = 27/74 (36%), Positives = 37/74 (49%), Gaps = 5/74 (6%)
Frame = -1
Query: 158 GAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEK---- 213
G G R+++ E VLR+ SG GGG G +GGGGG T+E + V +G
Sbjct: 532 GGGGCAGRVRRRER-GVLRAVSGDGGGGGGRGEGGGGGVLGTQEIR*SVVEDEGGSWVEG 356
Query: 214 -GKERASRYNDGGG 226
ER+ R + GG
Sbjct: 355 VWGERSKRVCEEGG 314
>TC218632 similar to UP|GRP1_PHAVU (P10495) Glycine-rich cell wall structural
protein 1.0 precursor (GRP 1.0), partial (27%)
Length = 447
Score = 40.4 bits (93), Expect = 0.001
Identities = 22/54 (40%), Positives = 24/54 (43%)
Frame = +3
Query: 177 SGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
+G G GGG G + GGGGGG G G R Y GGGSG G
Sbjct: 57 AGQGAGGGYGGGAVGGGGGG-----------GGGSGGGGARGGGYGAGGGSGEG 185
>CK605828
Length = 553
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/184 (23%), Positives = 66/184 (35%), Gaps = 8/184 (4%)
Frame = +1
Query: 95 KAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKK 154
K K+K G + +R + + K PP P+ P +TP + +K
Sbjct: 31 KIKKKKTGGEKKKRGGEKREK--ARKTPPKKRPPKPPPKRGPPQKTPLTRKPPRTPGGQK 204
Query: 155 KNNGAAGFLNRIKKNESVE---VLRSGSGGGGGSSGSSKGGGGGGTNT-KEQKKVVNNGK 210
K GF+ +K + ++ GGG + + G GG N K + +
Sbjct: 205 KQ---GGFIKPPQKGPGAKKGAPQKNPKKGGGRNPKAPLWGAAGGANPGKPPPRGIPPPN 375
Query: 211 GEKGK----ERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESS 266
GK E+ +R GG K+N R V R P+K KRG+
Sbjct: 376 PPAGKPPPPEKKTRRGGGGPPRGQPKKN--------RGVKRAPQKGGGKGNPQKRGKGGG 531
Query: 267 ASGG 270
S G
Sbjct: 532 QSSG 543
Score = 39.7 bits (91), Expect = 0.002
Identities = 42/179 (23%), Positives = 63/179 (34%), Gaps = 6/179 (3%)
Frame = +3
Query: 79 PTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPA 138
P + S+ + ++ + +K G + +S KN + + PP P K
Sbjct: 3 PKTRGQGSKKN*KKKNRGGKKKKGGGKKGKSQKNPPKKKAPQTPPKKGAPPKNPFNTKTP 182
Query: 139 ETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTN 198
P+ K GV K GA ++ + + GG G GGGGGG
Sbjct: 183 PDPRGAKKTRGVH-KTPPKGA-------RRKKGGPPKKPKKRGGKEPQGPPLGGGGGGQP 338
Query: 199 TKEQKKVVNNGKGEKGK---ERASRYNDGGGSGSGDKRNKN---IESNSKRNVGRPPKK 251
+ K K +GK R GGG+ G + K G+PPKK
Sbjct: 339 GETPPKGDTTPKPPRGKTPPPRKKNPKGGGGAPQGPTQKKPGG*KGPPKGGGEGKPPKK 515
Score = 32.0 bits (71), Expect = 0.32
Identities = 32/143 (22%), Positives = 46/143 (31%)
Frame = +1
Query: 51 PSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSN 110
P T + K P +++ +KP P ++ P+ K G +
Sbjct: 151 PQKTPLTRKPPRTP---GGQKKQGGFIKP---PQKGPGAKKGAPQKNPKKGGGRNPKAPL 312
Query: 111 KNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNE 170
+ A+ KPP P A KP K K + G + KKN
Sbjct: 313 WGAAGGANPGKPPPRGIPPPNPPAGKPPPPEK----------KTRRGGGGPPRGQPKKNR 462
Query: 171 SVEVLRSGSGGGGGSSGSSKGGG 193
V+ GG G KGGG
Sbjct: 463 GVKRAPQKGGGKGNPQKRGKGGG 531
>TC222801 weakly similar to UP|O23370 (O23370) Cell wall protein like,
partial (18%)
Length = 562
Score = 40.0 bits (92), Expect = 0.001
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = -1
Query: 172 VEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGD 231
++ LRSG GGGG G GGGGGG + + + G GE+ GGG G GD
Sbjct: 205 MQTLRSGQRGGGG--GERTGGGGGGGDDE-----LVGGGGERTGGGGGGERTGGGGGGGD 47
>CK606635
Length = 528
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 35/127 (27%)
Frame = +3
Query: 190 KGGGGGGTNTKEQKKVVNNGKGEKGK------ERASRY---NDGGGSGSG------DKRN 234
KGGGGG T K++KK G +K K ++ ++ GGG+ G K+
Sbjct: 45 KGGGGGKTKKKKKKKFPKGGGKKKKKKKFFPPQKKKKF*GKTPGGGTKKGKTGFWEKKKK 224
Query: 235 KNI------ESNSKRNVGR---PP---KKAAETVASTKRGRESSASGGKD--------KR 274
KN K+N G+ PP KK + K+G GGK KR
Sbjct: 225 KNF*IFFGGGGQQKKNFGKRGFPPP*GKKKGFSPQRGKKGALKKKGGGKKPPPNPFF*KR 404
Query: 275 PKKRSKK 281
PKKR +K
Sbjct: 405 PKKRGEK 425
Score = 34.3 bits (77), Expect = 0.065
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 210 KGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASG 269
K ++G+++ + GGG G+K K + NS+R V + KK K+ G
Sbjct: 7 KKKRGQKKKKKKKRGGG---GEKPKKKKKKNSQRGVEKKKKKKNFFPPKKKKNFRGKPRG 177
Query: 270 GKDKRPK----KRSKK 281
G+ KR K K+ KK
Sbjct: 178 GEPKREKPVFGKKKKK 225
Score = 30.0 bits (66), Expect = 1.2
Identities = 31/111 (27%), Positives = 42/111 (36%), Gaps = 8/111 (7%)
Frame = +2
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG----- 230
+ G GGG K GG K++KK+ + K K++ N GGG+ G
Sbjct: 41 KKGGGGGKNQKKKKKKIPKGGWKKKKKKKIFSPPK----KKKILGENPGGGNQKGKNRFL 208
Query: 231 DKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSA---SGGKDKRPKKR 278
K+ K N R G KK E + G + G K KKR
Sbjct: 209 GKKKKKKFLNFFRGGGATKKKFWEKGFPSPLGEKKGVFPPKGEKGGLKKKR 361
Score = 27.7 bits (60), Expect = 6.1
Identities = 31/126 (24%), Positives = 44/126 (34%), Gaps = 12/126 (9%)
Frame = +2
Query: 153 KKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSK------------GGGGGGTNTK 200
KKK G G N+ KK + + GG K G GG N K
Sbjct: 32 KKKKKGGGGGKNQKKKKKKIPK-------GGWKKKKKKKIFSPPKKKKILGENPGGGNQK 190
Query: 201 EQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTK 260
+ + + G+K K++ + GGG+ K S G P K + K
Sbjct: 191 GKNRFL----GKKKKKKFLNFFRGGGATKKKFWEKGFPSPLGEKKGVFPPKGEKGGLKKK 358
Query: 261 RGRESS 266
RG E +
Sbjct: 359 RGGEKT 376
>TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (14%)
Length = 642
Score = 40.0 bits (92), Expect = 0.001
Identities = 23/53 (43%), Positives = 25/53 (46%)
Frame = -3
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
GS GGGGS G S G GGG G G +G + GGGSGSG
Sbjct: 556 GSAGGGGS*GGSGGSAGGG-----------EGSGSQGGGSGGGGSQGGGSGSG 431
Score = 39.7 bits (91), Expect = 0.002
Identities = 21/55 (38%), Positives = 22/55 (39%)
Frame = -3
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
+ G GGGGS G G GGGG G G G E GGG G G
Sbjct: 484 QGGGSGGGGSQGGGSGSGGGG----------YGGGGSGGSEGGGSSGGGGGGGGG 350
Score = 39.7 bits (91), Expect = 0.002
Identities = 22/53 (41%), Positives = 25/53 (46%)
Frame = -3
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G GGGGG G GGG G K ++GKG KG + DGG G G
Sbjct: 367 GGGGGGGGGGGYGGGGDKGGGIGGDKGDYHHGKGGKGDK------DGGDKGGG 227
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -3
Query: 178 GSGGGG---GSSGSSKGG-GGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKR 233
GSGGGG G SGS GG GGGG+ E G G G Y GG G G
Sbjct: 475 GSGGGGSQGGGSGSGGGGYGGGGSGGSEGGGSSGGGGGGGGGGGGGGYGGGGDKGGGIGG 296
Query: 234 NKNIESNSKRNVG 246
+K + K G
Sbjct: 295 DKGDYHHGKGGKG 257
Score = 35.0 bits (79), Expect = 0.038
Identities = 22/56 (39%), Positives = 24/56 (42%)
Frame = -3
Query: 177 SGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDK 232
S GGG G SKGGGG G + G G G S GGG GSG +
Sbjct: 640 SEGGGGSAGGGGSKGGGGYGGGGSQGGGGSAGGGGS*GGSGGSA---GGGEGSGSQ 482
Score = 32.3 bits (72), Expect = 0.25
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 1/38 (2%)
Frame = -3
Query: 178 GSGGGGGSSGSSKGGGGGG-TNTKEQKKVVNNGKGEKG 214
G GG G G KGGGGG + +E + N GKG G
Sbjct: 274 GKGGKGDKDGGDKGGGGGY*ISIRESYVM*NKGKGPVG 161
>TC232041 similar to UP|Q91TR1 (Q91TR1) T32, partial (3%)
Length = 586
Score = 40.0 bits (92), Expect = 0.001
Identities = 24/86 (27%), Positives = 38/86 (43%), Gaps = 22/86 (25%)
Frame = +3
Query: 180 GGGGGSSGSSKGGGGGGTNTKEQKKVV----------------------NNGKGEKGKER 217
G GGS+ SS GGG GG +++ ++ V NN
Sbjct: 93 GPAGGSADSSGGGGSGGDSSQRRRFRVSLPWPFRQFAETSNVGSANNDSNNNNNNSNSNS 272
Query: 218 ASRYNDGGGSGSGDKRNKNIESNSKR 243
S N+GG S SG++ N+N +S +++
Sbjct: 273 GSSGNNGGQSNSGNRGNQNFDSETRQ 350
>TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (11%)
Length = 678
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/69 (36%), Positives = 27/69 (38%), Gaps = 11/69 (15%)
Frame = -3
Query: 177 SGSGGGGGSSGS-----------SKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGG 225
SG GGGG+SG KGGGG G + GKG G DGG
Sbjct: 415 SGGNGGGGASGGGDGRFGGEGDGGKGGGGDGGKGGGVDSGIGGGKGGGGDGGNGGGGDGG 236
Query: 226 GSGSGDKRN 234
G GD N
Sbjct: 235 NGGGGDGGN 209
Score = 39.3 bits (90), Expect = 0.002
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -3
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
G+GG GG G+S G GGGG + + G+G+ GK GGG SG
Sbjct: 448 GNGGSGGGGGASGGNGGGGASGGGDGRF--GGEGDGGKGGGGDGGKGGGVDSG 296
Score = 30.0 bits (66), Expect = 1.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 177 SGSGGGGGSSGSSKGGGGGG 196
+G GG GG+ G GG GGG
Sbjct: 259 NGGGGDGGNGGGGDGGNGGG 200
Score = 28.1 bits (61), Expect = 4.6
Identities = 19/52 (36%), Positives = 23/52 (43%)
Frame = -3
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGS 229
G+GGGG G + GGG GG NG G ++ GGG GS
Sbjct: 262 GNGGGG--DGGNGGGGDGG-----------NGGGGASGIGGGGHSLGGGGGS 146
Score = 27.7 bits (60), Expect = 6.1
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = -3
Query: 178 GSGGGGGSSGSSKGG----GGGGTN 198
G GGGG+SG GG GGGG++
Sbjct: 217 GGNGGGGASGIGGGGHSLGGGGGSS 143
>TC204097 homologue to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein,
partial (82%)
Length = 764
Score = 39.7 bits (91), Expect = 0.002
Identities = 29/86 (33%), Positives = 37/86 (42%), Gaps = 3/86 (3%)
Frame = +1
Query: 158 GAAGFLNRIKKNESVEVLRS---GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKG 214
GA N +N +V +S G GGGGG G ++GGGG G G G
Sbjct: 412 GAMNGQNLDGRNITVNEAQSRGGGGGGGGGGGGYNRGGGGYG--------------GRSG 549
Query: 215 KERASRYNDGGGSGSGDKRNKNIESN 240
R Y+ GG G G RN + S+
Sbjct: 550 GGRDRGYSRGGDGGDGGWRN*GLMSS 627
>TC219729 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (7%)
Length = 785
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = -2
Query: 158 GAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKER 217
G +G ++ +S G GGGG S ++ GGGG G+ ++ G G+ G
Sbjct: 421 GPSGVSGKVGSKQSTPPPPHGGFGGGGHSTTTGGGGGSGSGFGGGGHLITGGGGDGGNGG 242
Query: 218 ASRYNDGGGSGSGD 231
DGG G GD
Sbjct: 241 G---GDGGIGGGGD 209
Score = 32.3 bits (72), Expect = 0.25
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = -2
Query: 177 SGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKN 236
SGSG GGG + GGG GG + G G G GGG G G + +
Sbjct: 310 SGSGFGGGGHLITGGGGDGGNGGGGDGGIGGGGDGGGGHS----IGLGGGGGGGSLHSSH 143
Query: 237 I 237
I
Sbjct: 142 I 140
Score = 31.2 bits (69), Expect = 0.55
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -2
Query: 175 LRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGS 229
L +G GG GG+ G GG GGG G+ G + GGG GS
Sbjct: 280 LITGGGGDGGNGGGGDGGIGGG--------------GDGGGGHSIGLGGGGGGGS 158
>TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (22%)
Length = 1296
Score = 38.9 bits (89), Expect = 0.003
Identities = 21/54 (38%), Positives = 25/54 (45%)
Frame = -2
Query: 177 SGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
+G GGGGG G +GGGG T + V G G +G GGG G G
Sbjct: 164 TGGGGGGGDGGGGEGGGGDLT------QYVGEGGGGEGGGGGGE*TGGGGEGGG 21
Score = 38.1 bits (87), Expect = 0.004
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -2
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDK 232
G G GGG GS +GGGGGG + + +G G G+ GG G GDK
Sbjct: 446 GGGDGGGGGGSIQGGGGGGGSIQGG----GDGGGGGGE*TGGGGE*TGGGGGGDK 294
Score = 34.7 bits (78), Expect = 0.050
Identities = 23/58 (39%), Positives = 24/58 (40%), Gaps = 3/58 (5%)
Frame = -2
Query: 177 SGSGGGGGSSGSSKGGGGGGT---NTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGD 231
+G GG GG G GGGGGG E G GE N GGG G GD
Sbjct: 284 TGGGGEGGGGGGECGGGGGGECCGGGGEL**YCTGGGGE---------NTGGGGGGGD 138
Score = 34.3 bits (77), Expect = 0.065
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -2
Query: 175 LRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSG 228
++ G GGGG G GGGGGG T + G G +GGG G
Sbjct: 413 IQGGGGGGGSIQGGGDGGGGGGE*TGGGGE*TGGGGGGDK*G*TGGGGEGGGGG 252
Score = 33.1 bits (74), Expect = 0.14
Identities = 20/52 (38%), Positives = 25/52 (47%)
Frame = -2
Query: 178 GSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGS 229
G G GGG G+ G GGGG + ++G G+ G S GGG GS
Sbjct: 518 GDGDGGGW*GAGCGDGGGG-------ECSSHGGGDGGGGGGSIQGGGGGGGS 384
Score = 32.0 bits (71), Expect = 0.32
Identities = 20/52 (38%), Positives = 23/52 (43%)
Frame = -2
Query: 177 SGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSG 228
+G G GGG SS GGG GG + G G G + DGGG G
Sbjct: 488 AGCGDGGGGECSSHGGGDGGGGGGS----IQGGGGGGGSIQGG--GDGGGGG 351
Score = 27.3 bits (59), Expect = 7.9
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Frame = -2
Query: 178 GSGGGGG---SSGSSKGGGGGG 196
G GGGGG + G +GGGG G
Sbjct: 77 GEGGGGGGE*TGGGGEGGGGDG 12
>CA783317 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (23%)
Length = 159
Score = 37.0 bits (84), Expect = 0.010
Identities = 23/63 (36%), Positives = 25/63 (39%)
Frame = +2
Query: 170 ESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGS 229
E E R G GGGGG G GGGGGG G G +GGG G
Sbjct: 17 EPPEKSRPGGGGGGGGGGEGGGGGGGG------------GGG------GXXXGEGGGGGG 142
Query: 230 GDK 232
G +
Sbjct: 143 GGR 151
Score = 37.0 bits (84), Expect = 0.010
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +3
Query: 167 KKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKG 214
++N + R G G GGG GGGGGG +K G GE G
Sbjct: 12 EENHRKKAGRGGGGXGGGGGRGGGGGGGGGGGAXRXEKEGGGGGGEGG 155
Score = 35.8 bits (81), Expect = 0.022
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +3
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
++G GGGG G +GGGGG G G G R + GGG G
Sbjct: 30 KAGRGGGGXGGGGGRGGGGG-------------GGGGGGAXRXEKEGGGGGGEGG 155
Score = 35.0 bits (79), Expect = 0.038
Identities = 20/55 (36%), Positives = 21/55 (37%)
Frame = +1
Query: 176 RSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSG 230
+ GGGG G GGGGGG G G E R GGG G G
Sbjct: 31 KQAGGGGGXGGGGGGGGGGGG------------GGGGGXXEXRRRGGGGGGKGGG 159
Score = 29.3 bits (64), Expect = 2.1
Identities = 17/57 (29%), Positives = 20/57 (34%)
Frame = +1
Query: 179 SGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNK 235
+GGGGG G GGGGGG GGG G + R +
Sbjct: 37 AGGGGGXGGGGGGGGGGG--------------------------GGGGGGXXEXRRR 129
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.299 0.122 0.330
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,745,053
Number of Sequences: 63676
Number of extensions: 176635
Number of successful extensions: 5937
Number of sequences better than 10.0: 595
Number of HSP's better than 10.0 without gapping: 2913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4082
length of query: 281
length of database: 12,639,632
effective HSP length: 96
effective length of query: 185
effective length of database: 6,526,736
effective search space: 1207446160
effective search space used: 1207446160
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146756.6