BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146751.14 - phase: 1 /pseudo
(387 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC208008 homologue to UP|Q94KI6 (Q94KI6) Polygalacturonase (Frag... 69 4e-12
TC234187 weakly similar to UP|MFP1_LYCES (P93203) MAR binding fi... 41 8e-04
CF922383 40 0.001
CO983373 38 0.007
TC230862 38 0.009
TC205903 similar to UP|Q41113 (Q41113) BZIP transcriptional repr... 34 0.098
TC231052 similar to UP|O33678 (O33678) PrsD (ABC transporter ATP... 34 0.13
TC216047 weakly similar to UP|IF3A_ARATH (Q9LD55) Eukaryotic tra... 33 0.22
TC228840 similar to UP|Q9FYK8 (Q9FYK8) F21J9.22, partial (14%) 33 0.22
TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%) 33 0.29
AW756162 33 0.29
TC216046 weakly similar to UP|Q70Z43 (Q70Z43) Translation initia... 32 0.49
TC211489 similar to UP|Q9M1T3 (Q9M1T3) Structural maintenance of... 31 0.83
CK606360 30 1.4
BG507472 similar to GP|15982769|gb| At2g27110/T20P8.16 {Arabidop... 30 1.8
TC209847 30 1.8
TC230808 similar to UP|Q9FFJ7 (Q9FFJ7) Similarity to C3HC4-type ... 30 1.8
TC226326 UP|Q6R270 (Q6R270) Disease resistance protein, complete 30 2.4
TC216452 similar to UP|O81398 (O81398) Fructose-6-phosphate 2-ki... 30 2.4
TC232857 similar to UP|Q96258 (Q96258) AR791, partial (14%) 29 3.2
>TC208008 homologue to UP|Q94KI6 (Q94KI6) Polygalacturonase (Fragment),
partial (46%)
Length = 1144
Score = 68.9 bits (167), Expect = 4e-12
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = -3
Query: 3 ETSAETN*DEITY*ALLTTQLKRLLAKGQSMIILKLKAN*MISN--METQTPEIGSTSSD 60
E+ ETN*+++TY AL TQLKR + K +II+ LK +++ ME QT EI T D
Sbjct: 314 ESLLETN*EKVTYEALSRTQLKRKMMKVCLVIII*LKLESTLNDLIMEPQTLEIEVTKDD 135
Query: 61 ASISQANKDESNS-----VNDELNSVLNVNKLDTGEVDAGRSSF 99
SI++AN DE +S + DE + VLN + G+VDAG SF
Sbjct: 134 VSINRANXDEFSSKMEGFIKDEFDCVLNEKEPPEGQVDAGGGSF 3
>TC234187 weakly similar to UP|MFP1_LYCES (P93203) MAR binding filament-like
protein 1, partial (6%)
Length = 595
Score = 41.2 bits (95), Expect = 8e-04
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Frame = +2
Query: 116 LQQKEKELIDEVTVRSSEVEHLEQELEMMKAAAEMAFNNQQSVDSYLEQLTEQILAKGNH 175
L Q+ +L + + SS+V HL+QEL++ +A + +S + E +L N
Sbjct: 203 LSQERDDLKEALDNESSKVNHLKQELQV--TLENLAKSRNESAE------LENLLTLSNK 358
Query: 176 L-STLELEWDAIRKPLEERKKTLEESLYSSSPDAHVML-------QKLREMQQEEKSISS 227
L LELE + L E ++L+ +L + +A ++ + L+E Q E + +S
Sbjct: 359 LCKELELEVSKLSSELTEVNESLQRNLDDAKHEAEMLASELTTAKEHLKEAQAELQGVSK 538
Query: 228 EIRKREEEHSKLLADL 243
E+ E++ L +L
Sbjct: 539 ELTAALEKNDSLQKEL 586
>CF922383
Length = 691
Score = 40.4 bits (93), Expect = 0.001
Identities = 38/149 (25%), Positives = 72/149 (47%), Gaps = 17/149 (11%)
Frame = +1
Query: 241 ADLEKQQKVASRKSYTHRIEEI---TKNSRKQDADIERILKETRE----------VQLES 287
A++E+++KV S S T +EE ++ ++ + D+ +K+ E V+ E
Sbjct: 187 ANMEEEKKVISEVSVTKVVEEADHKNESIKETNGDLPSEVKKEEEENAFDGEFIKVEKEE 366
Query: 288 NSIHERLHRTYAVAD--EMVFREAKKDPTGQQVYKLLVNIHKGFEQISEKILAADRIRRE 345
NSI ++ H+T +D F EA+ +++ +L V + + E + D+++ E
Sbjct: 367 NSIDDKSHKTERSSDSPSREFLEAQ-----EKIQELEVELQRLTESLKTSEHENDQLKGE 531
Query: 346 VSEYEMKLAAAPSTSRSLDLS--KLQSDL 372
+S + KL + LDLS KLQ +
Sbjct: 532 ISVTKEKLEESGKKYEELDLSHKKLQEQI 618
Score = 31.2 bits (69), Expect = 0.83
Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 7/189 (3%)
Frame = +1
Query: 52 PEIGSTSSDASISQANKDESNSVNDELNSVLNVNKLD-----TGEVDAGRSSFGIEEDPS 106
P+ + + +AN +E V E++ V + D E + S +E+
Sbjct: 145 PKQSKATFPSQYKEANMEEEKKVISEVSVTKVVEEADHKNESIKETNGDLPSEVKKEEEE 324
Query: 107 PIDDGHLTVLQQKEKELIDEV--TVRSSEVEHLEQELEMMKAAAEMAFNNQQSVDSYLEQ 164
DG ++++E + D+ T RSS+ E ++A ++ Q ++ L++
Sbjct: 325 NAFDGEFIKVEKEENSIDDKSHKTERSSD----SPSREFLEAQEKI-----QELEVELQR 477
Query: 165 LTEQILAKGNHLSTLELEWDAIRKPLEERKKTLEESLYSSSPDAHVMLQKLREMQQEEKS 224
LTE + + L+ E ++ LEE K EE S +L+ + Q+ +
Sbjct: 478 LTESLKTSEHENDQLKGEISVTKEKLEESGKKYEELDLSHKKLQEQILEPENKYNQQLST 657
Query: 225 ISSEIRKRE 233
+ + +E
Sbjct: 658 LEEALXSQE 684
>CO983373
Length = 713
Score = 38.1 bits (87), Expect = 0.007
Identities = 28/136 (20%), Positives = 68/136 (49%), Gaps = 4/136 (2%)
Frame = -1
Query: 125 DEVTVRSSEVEHLEQELEMMKAAAEMAFNNQQSVDSYLEQLTEQILAKGNHLSTLELEWD 184
+++ + EV+H ++++ + A N + SY+EQL E++ T +L
Sbjct: 515 EDIXXKLQEVKHTQEQIT---STISNANNRVNEISSYIEQLEERLSKLKEERETFQL--- 354
Query: 185 AIRKPLEERKKTLEESLYSSSPDAHVMLQKLREMQQEEKSISSEIRKREEEHSK----LL 240
AI++ E++++TL+ + ++ L E++ +EK + ++ + +K L
Sbjct: 353 AIKEG-EKQRETLKNDSILWAHQTKDLVFDLAEIEAKEKILGQQLETDNDHQTKDLVFDL 177
Query: 241 ADLEKQQKVASRKSYT 256
A++E ++K+ ++ T
Sbjct: 176 AEIEAKEKILGQQLET 129
>TC230862
Length = 868
Score = 37.7 bits (86), Expect = 0.009
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 4/238 (1%)
Frame = +1
Query: 132 SEVEHLEQELEMMKAAAEMAFNNQQSVDSY-LEQLTEQILAKGNHLSTLELEWDAIRKPL 190
SE+E + Q E M+ + N D Y ++ +++ + K H +TL + A+ K L
Sbjct: 16 SEIETIGQAYEDMQTQNQNLLNQVIERDDYNIKLVSDSVKTKQAH-NTLMSQKQALAKQL 192
Query: 191 EERKKTLEES---LYSSSPDAHVMLQKLREMQQEEKSISSEIRKREEEHSKLLADLEKQQ 247
++ ++E S + S +L + QEEK ++ + + E LAD EK+
Sbjct: 193 QQINTSIENSKTRITHSEEQMKAILSDAIKCNQEEKHLAVTLEFAKWE----LADAEKEL 360
Query: 248 KVASRKSYTHRIEEITKNSRKQDADIERILKETREVQLESNSIHERLHRTYAVADEMVFR 307
K+ KS E+ +K IE L+ R ++ + E L DE+
Sbjct: 361 KLL--KSAVSSSEKEYDQIQKDTEAIEMELESERSLR---KKLEEELRELNCKIDELT-- 519
Query: 308 EAKKDPTGQQVYKLLVNIHKGFEQISEKILAADRIRREVSEYEMKLAAAPSTSRSLDL 365
TG+ + L + + + + + DR + V L P R+L+L
Sbjct: 520 ----SETGETTIQKLEKEIRICKNMIKCTVCTDRPKEVVIVKCYHLFCNPCIQRNLEL 681
>TC205903 similar to UP|Q41113 (Q41113) BZIP transcriptional repressor ROM1,
partial (46%)
Length = 827
Score = 34.3 bits (77), Expect = 0.098
Identities = 20/77 (25%), Positives = 39/77 (49%)
Frame = +1
Query: 220 QEEKSISSEIRKREEEHSKLLADLEKQQKVASRKSYTHRIEEITKNSRKQDADIERILKE 279
Q+E+ + + RK+ S + L KQ A + R+E + ++ +++R+ +E
Sbjct: 214 QDERELKRQKRKQSNRESARRSRLRKQ---AECEELQKRVESLGGENQTLREELQRLSEE 384
Query: 280 TREVQLESNSIHERLHR 296
++ E+NSI E L R
Sbjct: 385 CEKLTSENNSIKEELER 435
>TC231052 similar to UP|O33678 (O33678) PrsD (ABC transporter ATP-binding
protein), partial (4%)
Length = 1171
Score = 33.9 bits (76), Expect = 0.13
Identities = 23/117 (19%), Positives = 58/117 (48%)
Frame = +3
Query: 125 DEVTVRSSEVEHLEQELEMMKAAAEMAFNNQQSVDSYLEQLTEQILAKGNHLSTLELEWD 184
+++ ++ EV+H ++++ + A N + SY+EQL E++ T +L
Sbjct: 666 EDILLKLQEVKHTQEQIT---STISNANNRVNEISSYIEQLEERLSKLKEERETFQL--- 827
Query: 185 AIRKPLEERKKTLEESLYSSSPDAHVMLQKLREMQQEEKSISSEIRKREEEHSKLLA 241
AI++ E++++TL+ + ++ L E++ +EK + ++ + + + A
Sbjct: 828 AIKEG-EKQRETLKNDSILWAHQTKDLVFDLAEIEAKEKILGQQLETDNDAYDQFKA 995
>TC216047 weakly similar to UP|IF3A_ARATH (Q9LD55) Eukaryotic translation
initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic
translation initiation factor 3 large subunit) (eIF3a)
(p114), partial (22%)
Length = 664
Score = 33.1 bits (74), Expect = 0.22
Identities = 44/193 (22%), Positives = 82/193 (41%), Gaps = 7/193 (3%)
Frame = +2
Query: 165 LTEQILAKGN---HLSTLELEWDAIRKPLEERKKTLEESLYSSSPDAHVMLQKLREMQQE 221
LTEQ+ + L L D + + E L E+ Y +L RE QQ+
Sbjct: 86 LTEQLRERQEMEKKLQKLAKTMDHLERAKREEAAPLIEAAYQQRLVEERLLHD-RE-QQQ 259
Query: 222 EKSISSEIRKREEEHSKLLADLEKQQKVASRKSYTHRIEEITKNSRKQDADIERILKETR 281
E +S + + + + + L + +++ + +HR E + R+++ I RIL+ R
Sbjct: 260 EVELSKQRHEGDLKEKERLVRMMGNKEIYQARVVSHRQAEFNRLRREREERISRILQSRR 439
Query: 282 EVQLESNSIHERL----HRTYAVADEMVFREAKKDPTGQQVYKLLVNIHKGFEQISEKIL 337
+ + + + L R + +E EA+K ++ K + E+I+EK
Sbjct: 440 QEREKMRKLKYYLKLEEERQQKLHEE---EEARKREDAERKKKEEEERLRKLEEIAEK-- 604
Query: 338 AADRIRREVSEYE 350
+I RE+ E E
Sbjct: 605 -QRQIERELEEKE 640
>TC228840 similar to UP|Q9FYK8 (Q9FYK8) F21J9.22, partial (14%)
Length = 1294
Score = 33.1 bits (74), Expect = 0.22
Identities = 38/176 (21%), Positives = 71/176 (39%), Gaps = 4/176 (2%)
Frame = +2
Query: 215 LREMQQEEKSISSEIRKREEEHSKLLADLEKQQKVASRKSYTHRIEEITKNSRKQDADIE 274
+R Q E + + + E S L +E Q K + HRIEE+ + R + +IE
Sbjct: 20 VRASQLEIIELKHTVGELRAELSLLKQHIEAQAKELDHRM--HRIEELEEKERVANENIE 193
Query: 275 RILKETREVQLESN----SIHERLHRTYAVADEMVFREAKKDPTGQQVYKLLVNIHKGFE 330
++ + + E N + + V E V + + ++ + ++ K
Sbjct: 194 GLMMDIAAAEEEINRWKVAAEQEAAAGRGVEQEFVAQLSALKQEFEEAKQSMLESEKKLN 373
Query: 331 QISEKILAADRIRREVSEYEMKLAAAPSTSRSLDLSKLQSDLDAVIIREDDPLNSR 386
E+ AA R+ +E +KLA S+ + +L L+ RED ++R
Sbjct: 374 -FKEETAAAAMAARDAAEKSLKLADLRSSRLRDRVEELTHQLEEFENREDSRSHNR 538
>TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%)
Length = 1005
Score = 32.7 bits (73), Expect = 0.29
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 14/178 (7%)
Frame = +3
Query: 187 RKPLEERKKTLEESLYSSSPDAHVMLQKLREMQQEE----KSISSEIRKREEEHSKLLAD 242
+K ++++K ++ + + +K + + E+ K + +++E++H K D
Sbjct: 363 KKEKKDKEKEKKKEKKDKDEETDTLKEKGKNDEGEDDEGNKKKKKDKKEKEKDHKKEKKD 542
Query: 243 LEKQQKVASRKSYTHR---IEEITKNSRKQD--ADIERILKETREVQLESNSIHERLHRT 297
E+ +K S+ + R IEEI K K+D D + +KE ++ + +
Sbjct: 543 KEEGEKEDSKVEVSVRDIDIEEIKKEGEKEDKGKDGGKEVKEKKKKEDKDK--------- 695
Query: 298 YAVADEMVFREAKKDPTGQQVYKLLVNIHKGFEQISEKI-----LAADRIRREVSEYE 350
+E KK TG+ K L + + E+I+ KI AD I R++ E E
Sbjct: 696 ---------KEKKKKVTGKDKTKDLSTLKQKLEKINGKIQPLLEKKAD-IERQIKEVE 839
>AW756162
Length = 431
Score = 32.7 bits (73), Expect = 0.29
Identities = 27/106 (25%), Positives = 52/106 (48%)
Frame = +1
Query: 116 LQQKEKELIDEVTVRSSEVEHLEQELEMMKAAAEMAFNNQQSVDSYLEQLTEQILAKGNH 175
LQ++ K+L +++ LE+++ M E + + + S LE LTE++ +
Sbjct: 115 LQEEHKKLEVFAFESEAKIASLEEKIAAMLMEKEEVISINEGLMSELEGLTEKLNTSTSE 294
Query: 176 LSTLELEWDAIRKPLEERKKTLEESLYSSSPDAHVMLQKLREMQQE 221
L L E A+++ LEE +E L SS V++++ E+ +
Sbjct: 295 LYNLMEEISALKQRLEE-SDINQEKLKSS---VEVLMEEKEELAMQ 420
>TC216046 weakly similar to UP|Q70Z43 (Q70Z43) Translation initiation factor
3, partial (11%)
Length = 909
Score = 32.0 bits (71), Expect = 0.49
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 213 QKLREMQQEEKSISSEIRKREEEHSKLLADLEKQQKVASRKSYTHRIEEITKNSRKQDAD 272
QKLRE ++ K +E +K+EEE ++EEI + R+++ +
Sbjct: 161 QKLREAEEARKREDAERKKKEEEER------------------LRKLEEIAEKQRQRERE 286
Query: 273 IERILKETREVQL 285
+E K+ RE L
Sbjct: 287 LEEKEKQRREALL 325
>TC211489 similar to UP|Q9M1T3 (Q9M1T3) Structural maintenance of chromosomes
(SMC)-like protein, partial (15%)
Length = 633
Score = 31.2 bits (69), Expect = 0.83
Identities = 38/164 (23%), Positives = 69/164 (41%), Gaps = 3/164 (1%)
Frame = +3
Query: 95 GRSSFGIEEDPSPIDDGHLTVLQQKEKELIDEVTVRSSEVEHLE--QELEMMKAAAEMAF 152
G +S G+E DD + L +K+++ SE+E L +++ + ++ A
Sbjct: 96 GGTSGGMEARSKQWDDKKIEGLNKKKEQY-------ESELEELGSIRDMHLKESEASGKI 254
Query: 153 NNQQSVDSYLEQLTEQILAKGNHLSTLELEWDAIRKPLEERKKTLEESLYSSSPDAHVML 212
+ + Y E I K ++LS + KKT++E + SPD L
Sbjct: 255 SGLEKKIQYAEIEKRSIEDKLSNLS--------------QEKKTIKERIECISPD----L 380
Query: 213 QKLREMQQEEKSISSEIRKR-EEEHSKLLADLEKQQKVASRKSY 255
QKL + + + ++ KR E ++ D K VA+ + Y
Sbjct: 381 QKLNDAVNKSNADVRKLEKRINEITDRIYRDFSKSVGVANIREY 512
>CK606360
Length = 556
Score = 30.4 bits (67), Expect = 1.4
Identities = 37/181 (20%), Positives = 73/181 (39%), Gaps = 6/181 (3%)
Frame = +1
Query: 113 LTVLQQKEKELIDEVTVRSSEVEHLEQELEMMKAAAEMAFNNQQSVDSYLEQLTEQILAK 172
L K++ L + + S E L++E K ++E+ ++ +S LE +
Sbjct: 13 LNASNSKKERLEASLRLTSELCEDLKEE----KTSSELKILALETAESELEDCKRTRTSL 180
Query: 173 GNHLSTLELEWDAIRKPLEERKKTLEESLYSSSPDAHVMLQKLREMQQEEKSISSEIRKR 232
L LE + A E + + L S Q ++ ++QE+ ++ +
Sbjct: 181 EEKLLLLENDLKA-----RESRCVQDTELSHSKRINRQHQQTIQLLEQEKAEFQTKAQVL 345
Query: 233 EEEHSKLLADLEKQQKVASRKSYTHRIE------EITKNSRKQDADIERILKETREVQLE 286
EEE + Q +RKS T + + KN+ + ++ ++ LK RE+ +
Sbjct: 346 EEELKLIKEQRRNQVSKLNRKSLTVHDDMKASKNPVVKNTHQHRSNRKKSLKNDREIMKD 525
Query: 287 S 287
S
Sbjct: 526 S 528
>BG507472 similar to GP|15982769|gb| At2g27110/T20P8.16 {Arabidopsis
thaliana}, partial (1%)
Length = 410
Score = 30.0 bits (66), Expect = 1.8
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = +1
Query: 253 KSYTHRIEEITK----NSRKQDADIERILKETREVQLESNSIHERLHRTYAVADEMVFRE 308
K +TH++ +K S K + K RE+ LE + ++ R A +E
Sbjct: 19 KEHTHKLMSPSKVPWRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEE----- 183
Query: 309 AKKDPTGQQVYKLLVNIHKGFEQISEKILAADRIRREVSE 348
Q+ +L ++ K E ISEK+ A R RE+ E
Sbjct: 184 --------QLNMILNDLEKHTEHISEKVAAVVRSIREIEE 279
>TC209847
Length = 1275
Score = 30.0 bits (66), Expect = 1.8
Identities = 23/89 (25%), Positives = 39/89 (42%), Gaps = 3/89 (3%)
Frame = +2
Query: 190 LEERKKTLEESLYSSSPDAHVMLQKLREMQQEEKSISSEIRKREEEHSKLLADLEKQQKV 249
LE+ K LEE L S + HV+ QK + + S + E++S +A +++ +
Sbjct: 35 LEQNVKRLEEKLLSLEDENHVLRQKALSTPLLKSNRPSFAKSISEKYSSAIASRTERKTI 214
Query: 250 ASRKSYTHRIEEIT---KNSRKQDADIER 275
+ T I T +SR+ ER
Sbjct: 215 FESPTPTKLIAPFTLGLSDSRRSKLTAER 301
>TC230808 similar to UP|Q9FFJ7 (Q9FFJ7) Similarity to C3HC4-type RING zinc
finger protein, partial (28%)
Length = 896
Score = 30.0 bits (66), Expect = 1.8
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 202 YSSSPDAHVMLQKLREMQQEEKSISSEIRKREEEHSKLLADLEKQQKVASRKSYT 256
Y P+ ++++ + +Q + + R +EEE +L DLEKQ+ V SR+ ++
Sbjct: 217 YRVDPEDILLVEDAKPFRQSHQ----QQRNKEEERVRLNLDLEKQEIVESRRRHS 369
>TC226326 UP|Q6R270 (Q6R270) Disease resistance protein, complete
Length = 3786
Score = 29.6 bits (65), Expect = 2.4
Identities = 19/66 (28%), Positives = 33/66 (49%)
Frame = +1
Query: 139 QELEMMKAAAEMAFNNQQSVDSYLEQLTEQILAKGNHLSTLELEWDAIRKPLEERKKTLE 198
Q+L + ++ N Q+V++ + L + K HL LEL+WD+ ER + +
Sbjct: 2104 QQLGELNLHGSLSIENLQNVENPSDALAVDLKNK-THLVELELKWDSDWNQNRERDEIVI 2280
Query: 199 ESLYSS 204
E+L S
Sbjct: 2281 ENLQPS 2298
>TC216452 similar to UP|O81398 (O81398) Fructose-6-phosphate
2-kinase/fructose-2,6-bisphosphatase (Fragment) ,
partial (68%)
Length = 1249
Score = 29.6 bits (65), Expect = 2.4
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 13/161 (8%)
Frame = +3
Query: 149 EMAFNNQQSVDSYLEQLTEQILAKGNHLSTLELEWDAIR---------KPLEERKKTLEE 199
E ++++ + L IL G + +++W A+ K EE KK + E
Sbjct: 573 EKRLKSERAACIWTSTLQRTILTAGPIVGFPKIQWRALDEINAGVCDGKTYEEIKKNMPE 752
Query: 200 SLYSSSPDAHVMLQKLREMQQEEKSISSEIRKREEEHSKLLADLEKQQK---VASRKSYT 256
S + D KLR +S I++ E ++ +LE+Q+ V S ++
Sbjct: 753 EYESRNKD------KLRYRYPRGESYLDVIQRLEP----VIIELERQRAPVVVISHQAVL 902
Query: 257 HRIEE-ITKNSRKQDADIERILKETREVQLESNSIHERLHR 296
+ T K+ ADIE L E+QL + E+ ++
Sbjct: 903 RALYAYFTDRPLKEIADIEMPLHTIIEIQLGVTGVEEKRYK 1025
>TC232857 similar to UP|Q96258 (Q96258) AR791, partial (14%)
Length = 892
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/89 (21%), Positives = 40/89 (44%)
Frame = +1
Query: 206 PDAHVMLQKLREMQQEEKSISSEIRKREEEHSKLLADLEKQQKVASRKSYTHRIEEITKN 265
PD + +QK ++++ E + + + + E+S L L+ Q +A+ + +
Sbjct: 412 PDIQITMQKXKDLESEAEELRKSNLRLQIENSDLARRLDSTQILANAFLEDPEAGAVKQE 591
Query: 266 SRKQDADIERILKETREVQLESNSIHERL 294
S + R++KE + Q + S E L
Sbjct: 592 SECLKQENVRLMKEIEQFQSDRCSDLEEL 678
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.312 0.128 0.331
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,866,925
Number of Sequences: 63676
Number of extensions: 93276
Number of successful extensions: 523
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of query: 387
length of database: 12,639,632
effective HSP length: 99
effective length of query: 288
effective length of database: 6,335,708
effective search space: 1824683904
effective search space used: 1824683904
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146751.14