BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146751.12 - phase: 0
(513 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AW397036 268 4e-72
TC213889 similar to UP|Q9FG73 (Q9FG73) Nucleolar protein-like, p... 134 7e-32
TC207617 similar to UP|Q9LK54 (Q9LK54) Similarity to SUN and FMU... 112 3e-25
TC220743 similar to UP|Q84MA1 (Q84MA1) At1g06560, partial (27%) 62 6e-10
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 58 9e-09
TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 49 4e-06
TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 49 5e-06
TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 49 7e-06
TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 48 9e-06
TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C2... 48 9e-06
TC231231 weakly similar to UP|Q88TJ4 (Q88TJ4) Cell surface prote... 47 2e-05
BE822052 similar to GP|4557063|gb|A expressed protein {Arabidops... 45 6e-05
TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Pro... 45 6e-05
TC216024 similar to GB|AAM78036.1|21928015|AY125526 At2g01100/F2... 45 8e-05
TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 45 1e-04
BI971511 similar to GP|10177133|db contains similarity to nucleo... 45 1e-04
TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g4... 45 1e-04
CO985262 44 2e-04
TC227389 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacety... 43 3e-04
AI461269 43 4e-04
>AW397036
Length = 432
Score = 268 bits (685), Expect = 4e-72
Identities = 135/143 (94%), Positives = 139/143 (96%)
Frame = +2
Query: 270 KVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYI 329
KVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKER++DMAAAPGGKTTYI
Sbjct: 2 KVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYI 181
Query: 330 AALMKNSGIIFANEMKVPRLKSLTANLHRMGVSNTVVSNYDGKELPKVLGFNSVDRVLLD 389
AALMKN+GIIFANEMKVPRLKSLT NLHRMGVSNTVV NYDGKELPKVLG N VDRVLLD
Sbjct: 182 AALMKNTGIIFANEMKVPRLKSLTGNLHRMGVSNTVVCNYDGKELPKVLGVNVVDRVLLD 361
Query: 390 APCSGTGVISKDESVKTSKNLED 412
APCSGTGVISKDESVKTSK+LED
Sbjct: 362 APCSGTGVISKDESVKTSKSLED 430
>TC213889 similar to UP|Q9FG73 (Q9FG73) Nucleolar protein-like, partial (11%)
Length = 815
Score = 134 bits (338), Expect = 7e-32
Identities = 62/74 (83%), Positives = 66/74 (88%)
Frame = +2
Query: 440 YVVYSTCSIMVAENEAVIDYVLKRRDVKLVPCGLDFGRPGFTKFREQRFHPSLDKTRRFY 499
Y VYSTCSIM AE AVIDY LK+RDVKLVPCGLDFGRPGFT+ EQRFHPSL+KTRRFY
Sbjct: 17 YXVYSTCSIMXAEXXAVIDYALKKRDVKLVPCGLDFGRPGFTRXXEQRFHPSLEKTRRFY 196
Query: 500 PHVHNMDGFFVAKV 513
PHV NMDGFFVAK+
Sbjct: 197 PHVQNMDGFFVAKL 238
>TC207617 similar to UP|Q9LK54 (Q9LK54) Similarity to SUN and FMU proteins,
partial (37%)
Length = 1780
Score = 112 bits (281), Expect = 3e-25
Identities = 80/218 (36%), Positives = 120/218 (54%), Gaps = 6/218 (2%)
Frame = +2
Query: 302 LPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGIIFANEMKVPRLKSL--TANLHRM 359
L V + PQ E I+D AAPGGKT Y+A+ + G +FA ++ RL+ L TA LH++
Sbjct: 257 LVVSVVDPQPGETIIDCCAAPGGKTLYMASHLSGQGKVFAIDVNSGRLRILKETAKLHQV 436
Query: 360 GVSNTVVSNYDGKELPKVLGFNSVDRVLLDAPCSGTGVISKDESVKTSKNLEDIKKCAHL 419
T + + D + LP S ++VLLDAPCSG GV+SK ++ +KNLED+++ L
Sbjct: 437 DGVITAI-HADLRTLPDSGQLKS-NKVLLDAPCSGLGVLSKRADLRWNKNLEDMEQLKEL 610
Query: 420 QKELLLAAIDMVDSYSKSGGYVVYSTCSIMVAEN-EAVIDYVLKRRDVKLVPCGLDFGRP 478
Q ELL AA +V K GG +VYSTCSI EN + V+ ++ + D + P
Sbjct: 611 QDELLDAASKLV----KPGGVLVYSTCSIDPEENDDRVVAFLARHSDFHIDPV------- 757
Query: 479 GFTKFREQRFHPSLDKTRRFY---PHVHNMDGFFVAKV 513
++ P + + F+ P H++DG F A++
Sbjct: 758 ------DRYVPPDFETSSGFFFSNPVKHSLDGSFAARL 853
>TC220743 similar to UP|Q84MA1 (Q84MA1) At1g06560, partial (27%)
Length = 776
Score = 62.0 bits (149), Expect = 6e-10
Identities = 50/154 (32%), Positives = 76/154 (48%), Gaps = 12/154 (7%)
Frame = +1
Query: 371 GKELPKVLGFN--SVDRVLLDAPCSGTGVISKDESVKTSKNLEDIKKCAHLQKELLLAAI 428
G + + GF+ S DRVLLDAPCS G+ + + ++ ++ A Q+ + A+
Sbjct: 22 GGRVDRSKGFSPDSFDRVLLDAPCSALGL--RPRLFAGEETIQSLRNHAKYQRRMFDQAV 195
Query: 429 DMVDSYSKSGGYVVYSTCSIMVAENEAVIDYVL-KRRDVKLVPCGLDFGRPGFT------ 481
+V + GG +VYSTC+I ENEA++ Y L K + + L P G PG
Sbjct: 196 QLV----RPGGIIVYSTCTINPGENEALVRYALDKYKYLSLAPQHPRIGGPGLVGSCEFP 363
Query: 482 -KFREQRFHP-SLDKTRRFYPHVH-NMDGFFVAK 512
+ E+ P D +RF P + GFF+AK
Sbjct: 364 DGYIEEWLRPGEEDLVQRFDPSSPLDTIGFFIAK 465
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 58.2 bits (139), Expect = 9e-09
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Frame = +2
Query: 5 TKKKPSKPVKPQKAPKKVQIVPIKDDSTSESEEEEAPPLQ--HLELDGSDSDLSSDGDDQ 62
+K K +K + Q +V+++ +DD ES +E + E + D D D DD+
Sbjct: 215 SKMKATKELSEQVEENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDE 394
Query: 63 LADDFLQGSDDEDNDNDNDDEGSDLESGSGSDEDEDSDSESGEEDIARKSKLIDRKRERD 122
DD G DD+D D D+++EG G D+D DSD +S +++ + ++ E D
Sbjct: 395 -EDDAPDGGDDDD-DEDDEEEGDVQRGGEPDDDDNDSDDDSDDDEDEDEEDEEEQGEEED 568
Query: 123 SQAAADELQTNIQTNIQDESDEFTLPTKQELEEE 156
+ L ++T ++E+ P + EEE
Sbjct: 569 --LGTEYLIRPLETAEEEEASSDFEPEENGEEEE 664
Score = 37.7 bits (86), Expect = 0.012
Identities = 22/92 (23%), Positives = 43/92 (45%), Gaps = 13/92 (14%)
Frame = +2
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSD---------GDDQLADDFLQGSDDEDNDND 79
+DS +S+++E + E G + DL ++ +++ + DF + E+ + D
Sbjct: 491 NDSDDDSDDDEDEDEEDEEEQGEEEDLGTEYLIRPLETAEEEEASSDFEPEENGEEEEED 670
Query: 80 NDDEGSDLESG----SGSDEDEDSDSESGEED 107
DDE + SD+D+ D + GE+D
Sbjct: 671 VDDEDCEKAEAPPKRKRSDKDDSDDDDGGEDD 766
>TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 857
Score = 49.3 bits (116), Expect = 4e-06
Identities = 25/82 (30%), Positives = 41/82 (49%), Gaps = 4/82 (4%)
Frame = +1
Query: 28 KDDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQ----GSDDEDNDNDNDDE 83
+D+ + ++E+ P DG D + S + D+ D + GSDD D D+D DD
Sbjct: 370 EDEEDGDEDDEDGPDEDE---DGDDEEFSGEEGDEGGDPEDEANGEGSDDGDEDDDGDDN 540
Query: 84 GSDLESGSGSDEDEDSDSESGE 105
G + + G DE+ED + + E
Sbjct: 541 GDEEDDDDGEDEEEDEEEDEEE 606
Score = 41.6 bits (96), Expect = 9e-04
Identities = 31/84 (36%), Positives = 40/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 30 DSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLE- 88
+ SE+E+EE DG + D DG D+ D DDE+ + DEG D E
Sbjct: 352 NKNSETEDEE---------DGDEDD--EDGPDEDED-----GDDEEFSGEEGDEGGDPED 483
Query: 89 --SGSGS---DEDEDSDSESGEED 107
+G GS DED+D D EED
Sbjct: 484 EANGEGSDDGDEDDDGDDNGDEED 555
>TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 1090
Score = 48.9 bits (115), Expect = 5e-06
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = -1
Query: 49 DGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLESGSGSDEDEDSDSESGEEDI 108
+ + D DGDDQ D+ DD+D+D+D +DEG + E G++++E+ + E EE+
Sbjct: 427 ENGEEDEDEDGDDQDDDE-----DDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEE 263
Query: 109 A 109
A
Sbjct: 262 A 260
Score = 46.6 bits (109), Expect = 3e-05
Identities = 36/133 (27%), Positives = 56/133 (42%)
Frame = -1
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLE 88
D E EEE L + G ++ ++ + + A + G +E+ + D D++G D +
Sbjct: 550 DGGFGEGEEE----LSSEDGGGYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQD 383
Query: 89 SGSGSDEDEDSDSESGEEDIARKSKLIDRKRERDSQAAADELQTNIQTNIQDESDEFTLP 148
D+D+D + + G E E D A DE N +DE DE
Sbjct: 382 DDEDDDDDDDDEEDEGGE-------------EEDEDGAEDE------ENEEDEEDE---- 272
Query: 149 TKQELEEEALRPP 161
EEEAL+PP
Sbjct: 271 -----EEEALQPP 248
>TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 942
Score = 48.5 bits (114), Expect = 7e-06
Identities = 30/72 (41%), Positives = 40/72 (54%)
Frame = +1
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLE 88
D+ S EEEA P E +G+ SDGDD DD G DD+D+D + DD+G D E
Sbjct: 451 DEDFSGEGEEEADPEDDPEANGAGGS-DSDGDDD--DD---GGDDDDDD-NGDDDGEDEE 609
Query: 89 SGSGSDEDEDSD 100
G DE+++ D
Sbjct: 610 EGEDEDEEDEED 645
Score = 47.8 bits (112), Expect = 1e-05
Identities = 33/112 (29%), Positives = 45/112 (39%), Gaps = 9/112 (8%)
Frame = +1
Query: 46 LELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGS---------DLESGSGSDED 96
L D SDSD DGD++ DD DDE+ D D EG + GSD D
Sbjct: 364 LNKDASDSD--EDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPEDDPEANGAGGSDSD 537
Query: 97 EDSDSESGEEDIARKSKLIDRKRERDSQAAADELQTNIQTNIQDESDEFTLP 148
D D + G++D D D+ + + +DE DE +P
Sbjct: 538 GDDDDDGGDDD--------------DDDNGDDDGEDEEEGEDEDEEDEEDVP 651
Score = 45.1 bits (105), Expect = 8e-05
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +1
Query: 28 KDDSTSES---EEEEAPPLQHLELDGSDSDLSSDGDDQLA---DDFLQGSDDEDNDNDND 81
KD S S+ EEE+ + + D D S +G+++ D G+ D+D D+D
Sbjct: 370 KDASDSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPEDDPEANGAGGSDSDGDDD 549
Query: 82 DEGSDLESGSGSDEDEDSDSESGEED 107
D+G D + D+D + + E +ED
Sbjct: 550 DDGGDDDDDDNGDDDGEDEEEGEDED 627
Score = 33.9 bits (76), Expect = 0.18
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = +1
Query: 67 FLQGSDDEDNDNDNDDEGSDLESGSGSDEDEDSD-SESGEEDI-------ARKSKLIDRK 118
+L D D+D D D+E D ++ DE+ D D S GEE+ A + D
Sbjct: 358 YLLNKDASDSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPEDDPEANGAGGSDSD 537
Query: 119 RERDSQAAADELQTNIQTNIQDESDEFTLPTKQELEEEALRPP 161
+ D D+ N + +DE E +E EE+ +PP
Sbjct: 538 GDDDDDGGDDDDDDNGDDDGEDE--EEGEDEDEEDEEDVPQPP 660
>TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 850
Score = 48.1 bits (113), Expect = 9e-06
Identities = 26/77 (33%), Positives = 37/77 (47%)
Frame = +3
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLE 88
DD E++ + + G D +D DD + GSDD+D D+D DD+ +D +
Sbjct: 297 DDDNVNDGEDDNDDEEDEDFSGDDGGEEADSDDDPEANGGGGSDDDDGDDDEDDD-NDED 473
Query: 89 SGSGSDEDEDSDSESGE 105
G DEDE D E E
Sbjct: 474 DGDEDDEDEGDDDEDEE 524
Score = 47.0 bits (110), Expect = 2e-05
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = +3
Query: 28 KDDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDL 87
+DD+ E +E+ + E D SD D ++G DD G DDED+DND DD D
Sbjct: 321 EDDNDDEEDEDFSGDDGGEEAD-SDDDPEANGGGGSDDD--DGDDDEDDDNDEDDGDEDD 491
Query: 88 ESGSGSDEDEDS 99
E DEDE+S
Sbjct: 492 EDEGDDDEDEES 527
Score = 47.0 bits (110), Expect = 2e-05
Identities = 30/85 (35%), Positives = 46/85 (53%), Gaps = 5/85 (5%)
Frame = +3
Query: 28 KDDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDE---- 83
K TSE E ++A + + D + +D D DD+ +DF E+ D+D+D E
Sbjct: 240 KGKHTSE-ENKDASDTEDDDDDDNVNDGEDDNDDEEDEDFSGDDGGEEADSDDDPEANGG 416
Query: 84 -GSDLESGSGSDEDEDSDSESGEED 107
GSD + G DED+D+D + G+ED
Sbjct: 417 GGSDDDDGD-DDEDDDNDEDDGDED 488
>TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23), partial
(7%)
Length = 735
Score = 48.1 bits (113), Expect = 9e-06
Identities = 27/88 (30%), Positives = 45/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQ------GSDDEDNDNDNDD 82
DD + ++E+ + DG D + S + D+ D GSDD+D+DNDN++
Sbjct: 345 DDKDGDEDDEDG---HDQDDDGEDEEFSGEEGDEEGDPEDDPEANGGGSDDDDDDNDNEE 515
Query: 83 EGSDLESGSGSDEDEDSDSESGEEDIAR 110
+ D G DE+E+ D E EE+ ++
Sbjct: 516 DDDD-----GEDEEEEEDEEEDEEETSQ 584
Score = 42.0 bits (97), Expect = 7e-04
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +3
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGS--- 85
++ SE+E+++ DG + D DG DQ DD G D+E + + D+EG
Sbjct: 318 ENKNSETEDDDK--------DGDEDD--EDGHDQ--DD--DGEDEEFSGEEGDEEGDPED 455
Query: 86 DLESGSGSDEDEDSDSESGEEDIARKSKLIDRKRERDSQ 124
D E+ G +D+D D+++ E+D + + + E D +
Sbjct: 456 DPEANGGGSDDDDDDNDNEEDDDDGEDEEEEEDEEEDEE 572
Score = 37.7 bits (86), Expect = 0.012
Identities = 24/93 (25%), Positives = 40/93 (42%)
Frame = +3
Query: 69 QGSDDEDNDNDNDDEGSDLESGSGSDEDEDSDSESGEEDIARKSKLIDRKRERDSQAAAD 128
+ S+ ED+D D D++ D EDE+ E G+E+ D + D
Sbjct: 324 KNSETEDDDKDGDEDDEDGHDQDDDGEDEEFSGEEGDEE----GDPEDDPEANGGGSDDD 491
Query: 129 ELQTNIQTNIQDESDEFTLPTKQELEEEALRPP 161
+ + + + D DE ++E EEE +PP
Sbjct: 492 DDDNDNEEDDDDGEDEEEEEDEEEDEEETSQPP 590
>TC231231 weakly similar to UP|Q88TJ4 (Q88TJ4) Cell surface protein, partial
(10%)
Length = 1077
Score = 47.0 bits (110), Expect = 2e-05
Identities = 35/134 (26%), Positives = 63/134 (46%), Gaps = 5/134 (3%)
Frame = +3
Query: 28 KDDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFL---QGSDDEDNDNDNDDEG 84
++D+T E ++ + L L SS GDD +DD L SDD +++ + D+
Sbjct: 474 ENDTTPVPEPKKTSTI--LSLPKDSKCYSSSGDDSSSDDLLSDDSSSDDSSSEDSSSDDS 647
Query: 85 S--DLESGSGSDEDEDSDSESGEEDIARKSKLIDRKRERDSQAAADELQTNIQTNIQDES 142
S DL S S +D SD +S + I+ +S I + + + +++ ++ E+
Sbjct: 648 SSDDLSSDDSSSDDSSSDDDSSDPSISNES--IKKDEDYAESVGSCSVESVGSCSVDSET 821
Query: 143 DEFTLPTKQELEEE 156
+ T T Q L+ E
Sbjct: 822 SDATSGTTQVLK*E 863
>BE822052 similar to GP|4557063|gb|A expressed protein {Arabidopsis
thaliana}, partial (28%)
Length = 668
Score = 45.4 bits (106), Expect = 6e-05
Identities = 26/84 (30%), Positives = 38/84 (44%), Gaps = 7/84 (8%)
Frame = -1
Query: 30 DSTSESEEEEAPPLQHLELDGSDSDLSSDG-------DDQLADDFLQGSDDEDNDNDNDD 82
DS + +EE+ + D D S +G DD A+ +DD+D+D D+DD
Sbjct: 521 DSDEDEDEEDDHDTNDQNDEEGDEDFSGEGEEEADPEDDPEANGAGGSNDDDDSDEDDDD 342
Query: 83 EGSDLESGSGSDEDEDSDSESGEE 106
+ + G DE E D E EE
Sbjct: 341 DNDGDDDGEDEDEKEGEDEEDEEE 270
Score = 42.4 bits (98), Expect = 5e-04
Identities = 25/70 (35%), Positives = 36/70 (50%)
Frame = -1
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLE 88
D+ S EEEA P E +G+ S+D DD DD D+DND D+D E D +
Sbjct: 455 DEDFSGEGEEEADPEDDPEANGAGG--SNDDDDSDEDD------DDDNDGDDDGEDEDEK 300
Query: 89 SGSGSDEDED 98
G +++E+
Sbjct: 299 EGEDEEDEEE 270
Score = 38.9 bits (89), Expect = 0.006
Identities = 26/93 (27%), Positives = 44/93 (46%), Gaps = 13/93 (13%)
Frame = -1
Query: 28 KDDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFL-QGSDDEDNDND------- 79
KD S S+ +E+E D D + D++ +DF +G ++ D ++D
Sbjct: 533 KDASDSDEDEDEE----------DDHDTNDQNDEEGDEDFSGEGEEEADPEDDPEANGAG 384
Query: 80 --NDDEGSDL---ESGSGSDEDEDSDSESGEED 107
NDD+ SD + G D+ ED D + GE++
Sbjct: 383 GSNDDDDSDEDDDDDNDGDDDGEDEDEKEGEDE 285
Score = 34.7 bits (78), Expect = 0.11
Identities = 29/112 (25%), Positives = 46/112 (40%), Gaps = 6/112 (5%)
Frame = -1
Query: 46 LELDGSDSDLSSDG-DDQLADDFLQGSDDEDNDNDNDDEGS-----DLESGSGSDEDEDS 99
L D SDSD D DD +D DED + ++E + GS++D+DS
Sbjct: 539 LNKDASDSDEDEDEEDDHDTNDQNDEEGDEDFSGEGEEEADPEDDPEANGAGGSNDDDDS 360
Query: 100 DSESGEEDIARKSKLIDRKRERDSQAAADELQTNIQTNIQDESDEFTLPTKQ 151
D + +++ D + D + DE +DE + PTK+
Sbjct: 359 DEDDDDDNDGD-----DDGEDEDEKEGEDE---------EDEEEVPQPPTKK 246
Score = 32.3 bits (72), Expect = 0.52
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = -1
Query: 62 QLADDFLQGSDDEDNDND------NDDEGSDLESGSGSDE-DEDSDSESGEEDIARKSKL 114
+L D +DED ++D ND+EG + SG G +E D + D E+ +
Sbjct: 542 RLNKDASDSDEDEDEEDDHDTNDQNDEEGDEDFSGEGEEEADPEDDPEANGAGGSNDDDD 363
Query: 115 IDRKRERDSQAAADELQTNIQTNIQDESDEFTLP 148
D + D+ D+ + + +DE DE +P
Sbjct: 362 SDEDDDDDND-GDDDGEDEDEKEGEDEEDEEEVP 264
>TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23),
partial (8%)
Length = 581
Score = 45.4 bits (106), Expect = 6e-05
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +2
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLE 88
DD ++ E+ + + G D +D DD + G + +D+D D+DD+ D +
Sbjct: 296 DDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDD--PEANGGGESDDDDEDDDDDDDDND 469
Query: 89 SGSGSDEDEDSDSESGEED 107
G ++D+D + E +E+
Sbjct: 470 EDDGDEDDDDEEDEDEDEE 526
Score = 44.3 bits (103), Expect = 1e-04
Identities = 29/86 (33%), Positives = 41/86 (46%), Gaps = 4/86 (4%)
Frame = +2
Query: 26 PIKDDSTSESEEEEAPPLQHLELDGSDSDLSS--DGDDQLADDFLQGSDD--EDNDNDND 81
P K TSE ++ + E D D D++ DGDD DD DD E+ D+D+D
Sbjct: 230 PCKGKHTSEENKDASDT----EDDDDDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDD 397
Query: 82 DEGSDLESGSGSDEDEDSDSESGEED 107
E + DED+D D + +ED
Sbjct: 398 PEANGGGESDDDDEDDDDDDDDNDED 475
Score = 35.4 bits (80), Expect = 0.062
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +2
Query: 71 SDDEDNDNDND-DEGSDLESGSGSDEDEDSDSESGEEDIARKSKLIDRKRERDSQAAADE 129
SD ED+D+D+D ++G D G D+DED + SG++ D + ++ D+
Sbjct: 272 SDTEDDDDDDDVNDGED-----GDDDDEDDEDFSGDDGGEEADSDDDPEANGGGESDDDD 436
Query: 130 LQTNIQTNIQDESDEFTLPTKQELEEEALRPPDLSNLQRR 169
+ + DE D +E E+E P + +R+
Sbjct: 437 EDDDDDDDDNDEDDGDEDDDDEEDEDEDEETPQPPSKKRK 556
>TC216024 similar to GB|AAM78036.1|21928015|AY125526 At2g01100/F23H14.7
{Arabidopsis thaliana;} , partial (14%)
Length = 1433
Score = 45.1 bits (105), Expect = 8e-05
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Frame = +2
Query: 6 KKKPSKPVKPQKAPKKVQIVPIKDDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLAD 65
++K K ++ ++AP K + K ++ +E++E + +H + GSDSD +D DD+
Sbjct: 224 EEKKKKIMERKEAPLKWEQ---KLEAAAETKERKLKATKHKKRSGSDSDSDNDSDDESRK 394
Query: 66 DFLQGS---------DDEDNDNDNDDEGSDLESGSGSDEDEDSDSESGEEDIARKSKLID 116
+ D D++ + S S+ + D ES E+ RK K
Sbjct: 395 TSKRSHRKHRKHSHYDSGDHEKRKEKSSKRKTKKSSSETSDYDDFESSSEEERRKKKQSK 574
Query: 117 RKRER-------DSQAAADELQTNIQTNIQDESDEFT 146
+ R+R DS + ADEL + + + +F+
Sbjct: 575 KLRDRGSRSDSSDSDSIADELSKRKRHHKRQRPSKFS 685
>TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 1056
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/81 (30%), Positives = 44/81 (53%), Gaps = 2/81 (2%)
Frame = -3
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLE 88
++S ++S ++AP +G +G++ +D G D +D+D D+DD+ + E
Sbjct: 523 NNSNNKSNSKKAP-------EGGAGGAEENGEEDEDED---GDDQDDDDEDDDDDDEEDE 374
Query: 89 SGSGSDED--EDSDSESGEED 107
+G DED ED ++E EED
Sbjct: 373 AGEEEDEDGAEDEENEEDEED 311
Score = 44.3 bits (103), Expect = 1e-04
Identities = 35/133 (26%), Positives = 56/133 (41%)
Frame = -3
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLE 88
D E EEE L + G ++ ++ + + A + G +E+ + D D++G D +
Sbjct: 583 DGGFGEGEEE----LSSEDGGGYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQD 416
Query: 89 SGSGSDEDEDSDSESGEEDIARKSKLIDRKRERDSQAAADELQTNIQTNIQDESDEFTLP 148
D+D+D + E+GEE+ D A DE N +DE D
Sbjct: 415 DDDEDDDDDDEEDEAGEEE--------------DEDGAEDE------ENEEDEED----- 311
Query: 149 TKQELEEEALRPP 161
EEAL+PP
Sbjct: 310 ------EEALQPP 290
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = -3
Query: 49 DGSDSDLSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLESGSGSDEDEDSDSESGEEDI 108
+ + D DGDDQ DD D++D+D+D +DE + E G++++E+ + E EE +
Sbjct: 460 ENGEEDEDEDGDDQ--DD----DDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEEDEEAL 299
Query: 109 ARKSK 113
K
Sbjct: 298 QPPKK 284
Score = 32.7 bits (73), Expect = 0.40
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = -3
Query: 69 QGSDDEDNDNDNDDEGSDLESGSGSDEDEDSDSESGEEDIARKSKLIDRKRERDSQAAAD 128
+G D D++ D+DD+G + G G E+E S + G +K +K A+
Sbjct: 631 EGEDGNDDEGDDDDDG---DGGFGEGEEELSSEDGGGYGNNSNNKSNSKKAPEGGAGGAE 461
Query: 129 ELQTNIQTNIQDESDE 144
E + D+ D+
Sbjct: 460 ENGEEDEDEDGDDQDD 413
>BI971511 similar to GP|10177133|db contains similarity to nucleolar
protein~gene_id:K2A18.26 {Arabidopsis thaliana}, partial
(42%)
Length = 723
Score = 44.7 bits (104), Expect = 1e-04
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Frame = -2
Query: 373 ELPKVLGFNSV-----DRVLLDAPCSGTGVISKDES------------VKTSKNLEDIKK 415
EL + L N + D+VL+DA C+ G + + V ++ +D+
Sbjct: 626 ELYRTLSDNEIANHGYDKVLVDAECTHDGSVKHIQKFEDWGWGTLQRRVLDAERTDDLHT 447
Query: 416 CAHLQKELLLAAIDMVDSYSKSGGYVVYSTCSIMVAENEAVIDYVLKRR---DVKLVPCG 472
LQ LL ++ K GG +VYSTCS+ +A+NE V++ LK ++ +
Sbjct: 446 ---LQLNLLTNGFRLL----KVGGSLVYSTCSLTIAQNEDVVEQFLKENETAELTEIDAA 288
Query: 473 LDFGRPGFTKFREQRFHPSLDKTRRFYPHVHNMDGFFVAK 512
D+ G + KT RF P G FVAK
Sbjct: 287 SDWPCKG----------GRIPKTWRFDPLTSQTSGLFVAK 198
>TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g47970
{Arabidopsis thaliana;} , partial (39%)
Length = 867
Score = 44.7 bits (104), Expect = 1e-04
Identities = 34/123 (27%), Positives = 56/123 (44%), Gaps = 8/123 (6%)
Frame = +1
Query: 30 DSTSESEEEEAPPLQHLELDGSDSDLSSDGDD------QLADDFLQGSDDEDNDNDNDDE 83
D ++E+EE D + D GDD + D +G + +D+DND+DDE
Sbjct: 211 DDDDDNEDEE---------DDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDDDE 363
Query: 84 GSDLESGSGSDEDEDSDSESGEE-DIARKSKLIDRKRERDSQAAAD-ELQTNIQTNIQDE 141
DEDE+ + E GEE D+ + + + +A++D E + N + +D
Sbjct: 364 ----------DEDEEDEEEQGEEADLGTEYLIRPLVTAEEEEASSDFEPEENGEEEEEDV 513
Query: 142 SDE 144
DE
Sbjct: 514 DDE 522
Score = 42.0 bits (97), Expect = 7e-04
Identities = 27/89 (30%), Positives = 40/89 (44%)
Frame = +1
Query: 68 LQGSDDEDNDNDNDDEGSDLESGSGSDEDEDSDSESGEEDIARKSKLIDRKRERDSQAAA 127
L DD+DN+++ DD+ D G D+DED + ES D+ R + D + D +
Sbjct: 202 LSFDDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEES---DVQRGGEPDDDDNDDDDE-DE 369
Query: 128 DELQTNIQTNIQDESDEFTLPTKQELEEE 156
DE Q D E+ + EEE
Sbjct: 370 DEEDEEEQGEEADLGTEYLIRPLVTAEEE 456
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Frame = +1
Query: 29 DDSTSESEEEEAPPLQHLELDGSDSDLSSD---------GDDQLADDFLQGSDDEDNDND 79
DD E EE+E E G ++DL ++ +++ + DF + E+ + D
Sbjct: 352 DDDEDEDEEDE-------EEQGEEADLGTEYLIRPLVTAEEEEASSDFEPEENGEEEEED 510
Query: 80 NDDEGSDLESG----SGSDEDEDSDSESGEEDIARKSK 113
DDE + SD+D+ D + GE+D R SK
Sbjct: 511 VDDEDGEKSEAPPKRKRSDKDDSDDDDGGEDDDERPSK 624
>CO985262
Length = 801
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = -1
Query: 384 DRVLLDAPCSGTGVISKDESVKTSKNLEDIKKCAHLQKELLLAAIDMVDSYSKSGGYVVY 443
D VLLDAPCS + +D S + + A Q LL + + K G +VY
Sbjct: 441 DCVLLDAPCSSDRHVLQDSSELARWGVARTRAMAERQVALLSNGVKAL----KPRGRLVY 274
Query: 444 STCSIMVAENEAVIDYVLKR 463
STCS+ EN+ V+D V+ +
Sbjct: 273 STCSLSPIENDDVVDKVVTK 214
Score = 34.7 bits (78), Expect = 0.11
Identities = 24/76 (31%), Positives = 36/76 (46%)
Frame = -1
Query: 56 SSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLESGSGSDEDEDSDSESGEEDIARKSKLI 115
S+D D + D +DD+D +D DDE D+DEDSD + + R++ L+
Sbjct: 720 SADPSDDVKADGAANADDDDGGDDEDDE----------DDDEDSD-----DGVVRRTSLV 586
Query: 116 DRKRERDSQAAADELQ 131
+ SQA LQ
Sbjct: 585 CNEA---SQARRQRLQ 547
Score = 30.4 bits (67), Expect = 2.0
Identities = 22/58 (37%), Positives = 28/58 (47%), Gaps = 5/58 (8%)
Frame = -1
Query: 30 DSTSESEEEEAPPLQHLELDGSDSDLSSDG-----DDQLADDFLQGSDDEDNDNDNDD 82
DS + + A P D SD D+ +DG DD DD DDED+D D+DD
Sbjct: 771 DSDHKLDTAAATPAPTDSADPSD-DVKADGAANADDDDGGDD----EDDEDDDEDSDD 613
>TC227389 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (63%)
Length = 1144
Score = 43.1 bits (100), Expect = 3e-04
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Frame = +3
Query: 28 KDDSTSESEEEEAPPLQHLELDGSDSDLSSD---GDDQLADDFLQGSDDE--------DN 76
+D+ T E++E PL + E +G + D + + A GS + DN
Sbjct: 369 EDEFTDSDEDDEDVPLINTE-NGKPETKAEDLKVPESKKAVAKASGSAKQVKVVEPKKDN 545
Query: 77 DNDNDDEGSDLESGSGSDE----DEDSDSESGEEDIARKS--KLIDRKRERDSQAAA 127
+ D+DD+ D + GS +E D DSD ESG+ED ++ K +D ++R +++A+
Sbjct: 546 EEDSDDDSDDDDFGSSDEEMEDADSDSDDESGDEDDDEETPPKKVDLGKKRPNESAS 716
Score = 36.2 bits (82), Expect = 0.036
Identities = 29/108 (26%), Positives = 47/108 (42%), Gaps = 7/108 (6%)
Frame = +3
Query: 3 PATKKKPSKPVKPQKA-------PKKVQIVPIKDDSTSESEEEEAPPLQHLELDGSDSDL 55
P TK + K + +KA K+V++V K D+ +S++ D D D
Sbjct: 438 PETKAEDLKVPESKKAVAKASGSAKQVKVVEPKKDNEEDSDD-----------DSDDDDF 584
Query: 56 SSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLESGSGSDEDEDSDSES 103
S D+ +D SDDE D D+D+E + G +S S++
Sbjct: 585 GSS--DEEMEDADSDSDDESGDEDDDEETPPKKVDLGKKRPNESASKT 722
>AI461269
Length = 404
Score = 42.7 bits (99), Expect = 4e-04
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +1
Query: 295 LQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGIIFANEMKVPRL 349
++ +S + AL+P+ ++D AAPG KT ++AALMK G I A E++ R+
Sbjct: 211 VKGKASSMAAPALSPEPGWEVLDACAAPGNKTVHLAALMKXKGKIIACELQRERI 375
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.133 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,228,666
Number of Sequences: 63676
Number of extensions: 203237
Number of successful extensions: 2760
Number of sequences better than 10.0: 223
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of query: 513
length of database: 12,639,632
effective HSP length: 101
effective length of query: 412
effective length of database: 6,208,356
effective search space: 2557842672
effective search space used: 2557842672
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC146751.12