BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146743.13 + phase: 0
(492 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226934 similar to UP|Q9LNV5 (Q9LNV5) F22G5.30, partial (75%) 914 0.0
CF806443 303 1e-82
TC226935 similar to UP|Q9LNV5 (Q9LNV5) F22G5.30, partial (11%) 295 2e-80
TC228969 similar to UP|Q6Z358 (Q6Z358) RRM-containing RNA-bindin... 257 7e-69
TC226933 similar to UP|Q9LNV5 (Q9LNV5) F22G5.30, partial (5%) 213 2e-55
BU965342 207 9e-54
BM271504 homologue to GP|8096418|dbj| ESTs AU082563(S20379) D151... 189 2e-48
TC222394 80 2e-15
TC225027 similar to UP|Q39835 (Q39835) Extensin, partial (49%) 68 1e-11
TC222770 similar to UP|Q93YF1 (Q93YF1) Nucleic acid binding prot... 64 1e-10
TC227320 similar to UP|Q93YF1 (Q93YF1) Nucleic acid binding prot... 64 2e-10
TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein ... 62 4e-10
TC224979 similar to UP|Q09083 (Q09083) Hydroxyproline-rich glyco... 62 8e-10
TC214546 similar to PIR|T01932|T01932 RNA binding protein homolo... 61 1e-09
TC224723 hydroxyproline-rich glycoprotein 61 1e-09
TC224645 homologue to UP|Q41707 (Q41707) Extensin class 1 protei... 60 2e-09
TC214472 similar to PIR|T01932|T01932 RNA binding protein homolo... 60 2e-09
TC224968 similar to UP|Q39835 (Q39835) Extensin, partial (44%) 60 3e-09
TC204044 homologue to UP|Q09083 (Q09083) Hydroxyproline-rich gly... 60 3e-09
BQ741699 homologue to GP|3204132|emb extensin {Cicer arietinum},... 59 4e-09
>TC226934 similar to UP|Q9LNV5 (Q9LNV5) F22G5.30, partial (75%)
Length = 1613
Score = 914 bits (2361), Expect = 0.0
Identities = 437/491 (89%), Positives = 456/491 (92%)
Frame = +2
Query: 1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR
Sbjct: 164 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 343
Query: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAE 120
DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSI SNDAIPKSDVNREYFAE
Sbjct: 344 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREYFAE 523
Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYR 180
EHDR+ARAGIDYESS+GK RPNDTI+KLQRTTPYYKRNRAHICSFY RGECTRGAECPYR
Sbjct: 524 EHDRRARAGIDYESSYGKVRPNDTIMKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 703
Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVT 240
HEMPVTGELSQQNIKDRYYGVNDPVA+KLLGKAGEM++LE PEDESIKTLYVGGLDARVT
Sbjct: 704 HEMPVTGELSQQNIKDRYYGVNDPVALKLLGKAGEMNTLEAPEDESIKTLYVGGLDARVT 883
Query: 241 EQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300
EQDLRD+FYAHGEIES+KMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
Sbjct: 884 EQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 1063
Query: 301 PQSAKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQERNYYP 360
PQ++KPESDG DQA+QQASVAHSGL PRAVISQQQNQDQTQGMLYYNNPPP QQER+YYP
Sbjct: 1064PQTSKPESDGSDQAKQQASVAHSGLLPRAVISQQQNQDQTQGMLYYNNPPPLQQERSYYP 1243
Query: 361 SMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQ 420
SMDPQRMGAL+ S+D PGGPS SGENKPS KQQMQHY PMMPP GQYHHQYYPPY
Sbjct: 1244SMDPQRMGALVASEDDSPGGPSVSGENKPSLGKQQMQHYAHPMMPPLAGQYHHQYYPPY- 1420
Query: 421 QYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSSQTGSGQAGSAPA 480
MPPVPPYQQ+PP YNAA+ P QPPA NHPYQH MQPGSSQT SGQA APA
Sbjct: 1421-------GYMPPVPPYQQHPPPYNAAVAPSQPPAVNHPYQHSMQPGSSQTDSGQAAHAPA 1579
Query: 481 ETGTSTSGSQE 491
E+GTSTSGSQ+
Sbjct: 1580ESGTSTSGSQQ 1612
>CF806443
Length = 692
Score = 303 bits (776), Expect = 1e-82
Identities = 151/197 (76%), Positives = 159/197 (80%), Gaps = 1/197 (0%)
Frame = +3
Query: 297 MWGRPQSAKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQER 356
MWGRPQ+ KPESDG DQARQQASVAHSGL PRAVISQ+Q+QDQTQGMLYYNN PPPQQER
Sbjct: 9 MWGRPQTTKPESDGSDQARQQASVAHSGLLPRAVISQKQSQDQTQGMLYYNNLPPPQQER 188
Query: 357 NYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYY 416
+YYPSMDP+RMGAL+ SQD PGGPSGS EN P EKQQMQHY PMMPPP GQY HQYY
Sbjct: 189 SYYPSMDPRRMGALVSSQDA-PGGPSGSEENNPGLEKQQMQHYAHPMMPPPPGQY-HQYY 362
Query: 417 PPYQQYPPQYNAAMPPVPPYQQYP-PQYNAAMPPPQPPAANHPYQHPMQPGSSQTGSGQA 475
PPY MPP PPY QYP P YNAA P QPPAANHPY H MQPGSS +GS QA
Sbjct: 363 PPY--------GYMPPPPPYHQYPQPPYNAAAAPSQPPAANHPYPHSMQPGSS*SGSSQA 518
Query: 476 GSAPAETGTSTSGSQEQ 492
SAPAETGTSTS SQ+Q
Sbjct: 519 ASAPAETGTSTSESQQQ 569
>TC226935 similar to UP|Q9LNV5 (Q9LNV5) F22G5.30, partial (11%)
Length = 584
Score = 295 bits (756), Expect = 2e-80
Identities = 146/189 (77%), Positives = 154/189 (81%), Gaps = 3/189 (1%)
Frame = +3
Query: 306 PESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPP---QQERNYYPSM 362
PESDG DQARQQASVAHSGL PRAVISQQQNQDQTQGM+YYNNPP P QQER+YYPSM
Sbjct: 3 PESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNNPPGPPPLQQERSYYPSM 182
Query: 363 DPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQY 422
DPQRMGAL+ SQDGPPGGPSGSGENKPSS+KQQMQ+Y PMMPPP GQYHHQYYPPY
Sbjct: 183 DPQRMGALVASQDGPPGGPSGSGENKPSSDKQQMQNYTHPMMPPPPGQYHHQYYPPY--- 353
Query: 423 PPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSSQTGSGQAGSAPAET 482
MPPV PYQQY YNAA+ P Q PAANHPYQH MQP GSGQA APAE+
Sbjct: 354 -----GYMPPVSPYQQYASPYNAAVAPSQTPAANHPYQHSMQP-----GSGQAAHAPAES 503
Query: 483 GTSTSGSQE 491
GTSTSGSQ+
Sbjct: 504 GTSTSGSQQ 530
>TC228969 similar to UP|Q6Z358 (Q6Z358) RRM-containing RNA-binding
protein-like, partial (9%)
Length = 965
Score = 257 bits (657), Expect = 7e-69
Identities = 133/185 (71%), Positives = 141/185 (75%), Gaps = 9/185 (4%)
Frame = +3
Query: 317 QASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQERNYYPSMDPQRMGALLPSQDG 376
+ASVAHSGL PRAVISQ+Q+QDQTQGMLYYNN PPPQQER+YYPSMDP+RMGAL+ SQD
Sbjct: 6 RASVAHSGLLPRAVISQKQSQDQTQGMLYYNNLPPPQQERSYYPSMDPRRMGALVSSQDA 185
Query: 377 PPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPY 436
P GGPSGS EN P EKQQMQHY PMMPPP GQY HQYYPPY MPP PPY
Sbjct: 186 P-GGPSGSEENNPGLEKQQMQHYAHPMMPPPPGQY-HQYYPPY--------GYMPPPPPY 335
Query: 437 QQYP-PQYNA--------AMPPPQPPAANHPYQHPMQPGSSQTGSGQAGSAPAETGTSTS 487
QYP P YNA A P QPPAANHPY H MQPGSS +GS QA SAPAETGTSTS
Sbjct: 336 HQYPQPPYNAAAAPSQPPAAAPSQPPAANHPYPHSMQPGSS*SGSSQAASAPAETGTSTS 515
Query: 488 GSQEQ 492
SQ+Q
Sbjct: 516 ESQQQ 530
>TC226933 similar to UP|Q9LNV5 (Q9LNV5) F22G5.30, partial (5%)
Length = 652
Score = 213 bits (541), Expect = 2e-55
Identities = 105/141 (74%), Positives = 109/141 (76%), Gaps = 1/141 (0%)
Frame = +1
Query: 353 QQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYH 412
QQER+YYPSMD QRMG L+ SQDGPPGGPSG GENKP EKQQMQHY PMMPP GQY
Sbjct: 1 QQERSYYPSMDXQRMGXLVSSQDGPPGGPSGLGENKPGLEKQQMQHYAHPMMPPQPGQY- 177
Query: 413 HQYYPPYQQYPPQYNAAMPPVPPYQQY-PPQYNAAMPPPQPPAANHPYQHPMQPGSSQTG 471
HQYYPPY MPP PPY QY PP YNAA+ P QPPAANHPYQH MQPGSSQ G
Sbjct: 178 HQYYPPY--------GYMPPPPPYHQYPPPPYNAAVAPSQPPAANHPYQHSMQPGSSQPG 333
Query: 472 SGQAGSAPAETGTSTSGSQEQ 492
S QA SAPAETGTSTSGS +Q
Sbjct: 334 SSQAASAPAETGTSTSGS*QQ 396
>BU965342
Length = 328
Score = 207 bits (527), Expect = 9e-54
Identities = 97/109 (88%), Positives = 102/109 (92%)
Frame = +1
Query: 150 RTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVAMKL 209
R PYYKRN AHICSFY RGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVA+KL
Sbjct: 1 RVRPYYKRNPAHICSFYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKL 180
Query: 210 LGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVK 258
LGKAGEMS+LE PEDES +LYVGGLDARVTEQDLRD+FYAHGEIES+K
Sbjct: 181 LGKAGEMSTLEAPEDESFFSLYVGGLDARVTEQDLRDHFYAHGEIESIK 327
>BM271504 homologue to GP|8096418|dbj| ESTs AU082563(S20379) D15187(C0226)
AU082476(C0226) AU082563(S20379) correspond to a region
of the, partial (18%)
Length = 426
Score = 189 bits (481), Expect = 2e-48
Identities = 89/106 (83%), Positives = 94/106 (87%)
Frame = +2
Query: 20 PIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSEICQTCSKLKNV 79
PI+C + T+AEYDKECKICTRPFTVFRWRPGRDARYKK+EICQTCSKLKNV
Sbjct: 14 PIVCSIAFCYAYLSVQTRAEYDKECKICTRPFTVFRWRPGRDARYKKTEICQTCSKLKNV 193
Query: 80 CQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRK 125
CQVCLLDLEYGLPVQVRDTALSI SNDAIPKSDVNREYFAEEHDR+
Sbjct: 194 CQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREYFAEEHDRR 331
>TC222394
Length = 599
Score = 80.5 bits (197), Expect = 2e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRM 35
MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRM
Sbjct: 341 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRM 445
>TC225027 similar to UP|Q39835 (Q39835) Extensin, partial (49%)
Length = 747
Score = 67.8 bits (164), Expect = 1e-11
Identities = 41/129 (31%), Positives = 56/129 (42%), Gaps = 11/129 (8%)
Frame = +2
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGP---------SGSGENKPSSEKQQ 395
YY++PPPP ++ YY S P PP P S + P K+
Sbjct: 224 YYHSPPPPYKKPYYYHSPPPPPKKPYYYHSPPPPSPPPPKKPYYYHSPPPPSPPPPYKKP 403
Query: 396 MQHYGRPMM--PPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPP 453
++ P PPP+ YHH PP + P Y + PP PP ++ P Y + PPP P
Sbjct: 404 YYYHSPPPP*PPPPKPYYHHSPPPPPPKKKPYYYHSPPPPPPKKK--PYYYHSPPPPHPY 577
Query: 454 AANHPYQHP 462
HP+ HP
Sbjct: 578 PHPHPHPHP 604
Score = 56.6 bits (135), Expect = 2e-08
Identities = 42/136 (30%), Positives = 55/136 (39%), Gaps = 16/136 (11%)
Frame = +2
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPG-------GPSGSGENKPSSEKQQMQH 398
Y++PPPP++ YP + P PS PP PS S KP
Sbjct: 89 YSSPPPPKK----YPPVSPPYH---YPSPPPPPKYYYLSLPPPSPSPPKKPYYYHSPPPP 247
Query: 399 YGRPMM-----PPPQGQYHHQYYPPYQQYPPQ----YNAAMPPVPPYQQYPPQYNAAMPP 449
Y +P PPP+ Y++ PP PP+ Y++ PP PP P Y + PP
Sbjct: 248 YKKPYYYHSPPPPPKKPYYYHSPPPPSPPPPKKPYYYHSPPPPSPPPPYKKPYYYHSPPP 427
Query: 450 PQPPAANHPYQHPMQP 465
P PP Y H P
Sbjct: 428 P*PPPPKPYYHHSPPP 475
Score = 56.2 bits (134), Expect = 3e-08
Identities = 37/124 (29%), Positives = 51/124 (40%), Gaps = 6/124 (4%)
Frame = +2
Query: 348 NPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPP 407
+PPPP ++ YY S P PP P P K++ +Y P PPP
Sbjct: 377 SPPPPYKKPYYYHSPPPP*P---------PPPKPYYHHSPPPPPPKKKPYYYHSPPPPPP 529
Query: 408 QGQ-YHHQYYPPYQQYPPQYNAAMPPV-----PPYQQYPPQYNAAMPPPQPPAANHPYQH 461
+ + Y++ PP YP + PP PP + P +Y + PP PP HP H
Sbjct: 530 KKKPYYYHSPPPPHPYPHPHPHPHPPFVHYSPPPSPKKPYKYPSPPPPVHPPYTPHPVYH 709
Query: 462 PMQP 465
P
Sbjct: 710 SPPP 721
Score = 48.5 bits (114), Expect = 7e-06
Identities = 35/119 (29%), Positives = 46/119 (38%)
Frame = +2
Query: 350 PPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQG 409
PP NY S P P + PP P + P K P PP+
Sbjct: 59 PPQILADNYLYSSPP-------PPKKYPPVSPPYHYPSPPPPPKYYYLSLPPPSPSPPKK 217
Query: 410 QYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSS 468
Y++ PP + P Y++ PP PP + Y Y + PPP PP PY + P S
Sbjct: 218 PYYYHSPPPPYKKPYYYHS--PPPPPKKPY---YYHSPPPPSPPPPKKPYYYHSPPPPS 379
>TC222770 similar to UP|Q93YF1 (Q93YF1) Nucleic acid binding protein, partial
(38%)
Length = 790
Score = 64.3 bits (155), Expect = 1e-10
Identities = 34/95 (35%), Positives = 54/95 (56%)
Frame = +3
Query: 211 GKAGEMSSLEVPEDESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTY 270
G +S + D + T+ VGGLD VT +DL+ F +GEI SVK+ + + C FV +
Sbjct: 99 GSQSNGTSSQSEADSTNTTIXVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQF 278
Query: 271 TTREGAEKAAEELSNKLVIKGLRLKLMWGRPQSAK 305
R AE+A ++L+ + K + ++L WGR + K
Sbjct: 279 ANRNNAEEALQKLNGTTIGKQM-VRLSWGRSPANK 380
>TC227320 similar to UP|Q93YF1 (Q93YF1) Nucleic acid binding protein, partial
(70%)
Length = 1724
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = +1
Query: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEEL 283
D + T++VGGLD V+++DLR F +GEI SVK+ + + C FV + R AE+A ++L
Sbjct: 1006 DSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKL 1185
Query: 284 SNKLVIKGLRLKLMWGRPQSAK 305
N I ++L WGR + K
Sbjct: 1186 -NGTTIGKQTVRLSWGRNPANK 1248
Score = 39.7 bits (91), Expect = 0.003
Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +1
Query: 406 PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPP-----AANHPYQ 460
PP + P Q P QY AA V P+ PPQ+ A PPP P AA H +Q
Sbjct: 223 PPPPRQSPAVARPQQWVPMQYPAAAAMVMPHHMLPPQHYA--PPPYVPYHHQYAAQHQHQ 396
Query: 461 HPMQPGSSQTGSG 473
H Q GSG
Sbjct: 397 H-------QNGSG 414
Score = 32.0 bits (71), Expect = 0.65
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 6/78 (7%)
Frame = +1
Query: 349 PPPPQQE------RNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
PPPP+Q + + P P ++P PP QHY
Sbjct: 223 PPPPRQSPAVARPQQWVPMQYPAAAAMVMPHHMLPP------------------QHYA-- 342
Query: 403 MMPPPQGQYHHQYYPPYQ 420
PPP YHHQY +Q
Sbjct: 343 --PPPYVPYHHQYAAQHQ 390
>TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (67%)
Length = 1240
Score = 62.4 bits (150), Expect = 4e-10
Identities = 42/125 (33%), Positives = 50/125 (39%), Gaps = 4/125 (3%)
Frame = +3
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY++PPPP++ + YY S P P P PS PS H
Sbjct: 483 YYHSPPPPKEHVHPPYYYHSPPPPSPSPPPPYYYKSPPPPS------PSPPPPYYYHSPP 644
Query: 402 PMMP-PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQ 460
P P PP Y+H PP PP Y PP PP PP Y PPP P + PY
Sbjct: 645 PPSPSPPPPYYYHSPPPPSPSPPPPYYYKSPP-PPSPSPPPPYYYQSPPPPSPTPHPPYY 821
Query: 461 HPMQP 465
+ P
Sbjct: 822 YKSPP 836
Score = 60.5 bits (145), Expect = 2e-09
Identities = 41/128 (32%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Frame = +3
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY++PPPP YY S P PS PP P P S +Y +
Sbjct: 627 YYHSPPPPSPSPPPPYYYHSPPP-------PSPSPPP--PYYYKSPPPPSPSPPPPYYYQ 779
Query: 402 ---PMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANH 457
P P P Y+++ PP +PP Y+ PP P PP + + PPP P PA +
Sbjct: 780 SPPPPSPTPHPPYYYKSPPPPTSHPPPYHYVSPPPPSPSPPPPYHYTSPPPPSPAPAPKY 959
Query: 458 PYQHPMQP 465
Y+ P P
Sbjct: 960 IYKSPPPP 983
Score = 58.2 bits (139), Expect = 8e-09
Identities = 42/131 (32%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Frame = +3
Query: 345 YYNNPPPPQQERN--YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY++PPPP YY P P PP PS +Y P
Sbjct: 339 YYHSPPPPSPSPPPPYYYKSPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYHSP 497
Query: 403 MMPPPQGQYHHQYY-----PPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANH 457
PPP+ H YY PP PP Y PP PP PP Y PPP P+
Sbjct: 498 --PPPKEHVHPPYYYHSPPPPSPSPPPPYYYKSPP-PPSPSPPPPYYYHSPPPPSPSPPP 668
Query: 458 PYQHPMQPGSS 468
PY + P S
Sbjct: 669 PYYYHSPPPPS 701
Score = 56.6 bits (135), Expect = 2e-08
Identities = 40/130 (30%), Positives = 47/130 (35%), Gaps = 6/130 (4%)
Frame = +3
Query: 345 YYNNPPPPQQ--ERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP + YY P P PP PS +Y P
Sbjct: 291 YYKSPPPPSPVPKPPYYYHSPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 449
Query: 403 MMP---PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHP 458
P PP Y+H PP + P Y PP P PP Y + PPP P P +
Sbjct: 450 PPPSPSPPPPYYYHSPPPPKEHVHPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY 629
Query: 459 YQHPMQPGSS 468
Y P P S
Sbjct: 630 YHSPPPPSPS 659
Score = 56.2 bits (134), Expect = 3e-08
Identities = 42/142 (29%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Frame = +3
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY++PPPP YY S P P P PS PS H
Sbjct: 531 YYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPS------PSPPPPYYYHSPP 692
Query: 402 PMMPPPQGQYHHQYYPP----------YQQYPPQYNAAMPPV-----PPYQQYPPQYNAA 446
P P P Y+++ PP YQ PP PP PP +PP Y+
Sbjct: 693 PPSPSPPPPYYYKSPPPPSPSPPPPYYYQSPPPPSPTPHPPYYYKSPPPPTSHPPPYHYV 872
Query: 447 MPPPQPPAANHPYQHPMQPGSS 468
PPP P+ PY + P S
Sbjct: 873 SPPPPSPSPPPPYHYTSPPPPS 938
Score = 55.5 bits (132), Expect = 5e-08
Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 6/130 (4%)
Frame = +3
Query: 345 YYNNPPPPQ--QERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP + YY P P PP PS +Y P
Sbjct: 51 YYQSPPPPSPIPKPPYYYHSPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 209
Query: 403 MMPPPQGQ---YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHP 458
P P + Y+H PP PP Y PP P PP Y + PPP P P +
Sbjct: 210 PPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYY 389
Query: 459 YQHPMQPGSS 468
Y+ P P S
Sbjct: 390 YKSPPPPSPS 419
Score = 53.9 bits (128), Expect = 2e-07
Identities = 40/128 (31%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Frame = +3
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY++PPPP YY S P P P PS P + H
Sbjct: 99 YYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPS------PVPKPPYYYHSPP 260
Query: 402 PMMPPPQGQYHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQ 460
P P P Y+++ PP P P Y PP PP PP Y PPP P+ PY
Sbjct: 261 PPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPP-PPSPSPPPPYYYKSPPPPSPSPPPPYY 437
Query: 461 HPMQPGSS 468
+ P S
Sbjct: 438 YKSPPPPS 461
Score = 45.4 bits (106), Expect = 6e-05
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +3
Query: 389 PSSEKQQMQHYGRPMMPPPQGQ---YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNA 445
PS + +Y P P P + Y+H PP PP Y PP P PP Y
Sbjct: 24 PSPVPKPPYYYQSPPPPSPIPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYK 203
Query: 446 AMPPPQP-PAANHPYQHPMQPGSS 468
+ PPP P P + Y P P S
Sbjct: 204 SPPPPSPVPKPPYYYHSPPPPSPS 275
Score = 43.5 bits (101), Expect = 2e-04
Identities = 25/68 (36%), Positives = 30/68 (43%), Gaps = 1/68 (1%)
Frame = +3
Query: 402 PMMPPPQGQYHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQ 460
P P P+ Y++Q PP P P Y PP PP PP Y PPP P+ PY
Sbjct: 21 PPSPVPKPPYYYQSPPPPSPIPKPPYYYHSPP-PPSPSPPPPYYYKSPPPPSPSPPPPYY 197
Query: 461 HPMQPGSS 468
+ P S
Sbjct: 198 YKSPPPPS 221
Score = 41.6 bits (96), Expect = 8e-04
Identities = 34/109 (31%), Positives = 38/109 (34%), Gaps = 3/109 (2%)
Frame = +3
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPM- 403
YY +PPPP PS P P P P P + HY P
Sbjct: 723 YYKSPPPPS------PSPPPPYYYQSPPPPSPTPHPPYYYKSPPPPTSHPPPYHYVSPPP 884
Query: 404 -MPPPQGQYHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPP 450
P P YH+ PP P P+Y PP PP Y A PPP
Sbjct: 885 PSPSPPPPYHYTSPPPPSPAPAPKYIYKSPP-------PPVYIYASPPP 1010
Score = 40.4 bits (93), Expect = 0.002
Identities = 35/122 (28%), Positives = 42/122 (33%), Gaps = 14/122 (11%)
Frame = +3
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY++PPPP YY S P PS PP P P S +Y +
Sbjct: 675 YYHSPPPPSPSPPPPYYYKSPPP-------PSPSPPP--PYYYQSPPPPSPTPHPPYYYK 827
Query: 402 PMMPPPQGQYHHQYY---PPYQQYPPQYNAAMPPVPP--------YQQYPPQYNAAMPPP 450
PP + Y PP PP Y+ PP P Y+ PP PP
Sbjct: 828 SPPPPTSHPPPYHYVSPPPPSPSPPPPYHYTSPPPPSPAPAPKYIYKSPPPPVYIYASPP 1007
Query: 451 QP 452
P
Sbjct: 1008PP 1013
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/59 (33%), Positives = 24/59 (39%), Gaps = 1/59 (1%)
Frame = +3
Query: 411 YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHPYQHPMQPGSS 468
Y+ PP P Y PP P PP Y + PPP P P + Y+ P P S
Sbjct: 3 YYKSPPPPSPVPKPPYYYQSPPPPSPIPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPS 179
>TC224979 similar to UP|Q09083 (Q09083) Hydroxyproline-rich glycoprotein
precursor, partial (32%)
Length = 693
Score = 61.6 bits (148), Expect = 8e-10
Identities = 43/139 (30%), Positives = 59/139 (41%), Gaps = 21/139 (15%)
Frame = +1
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGP----SGSGENKPSSEKQQMQHYG 400
YY++PPPP ++ YY S P PS P P S + P +K H
Sbjct: 205 YYHSPPPPPKKPYYYHSPPP-------PSPPPPYKKPYYYHSPPPPSPPPPKKPYYYHSP 363
Query: 401 RPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQ--------P 452
P PPP Y++ PP + P Y + PP PP + Y Y++ PPP+ P
Sbjct: 364 PPPSPPPPKPYYYHSPPPPPKKKPYYYHSPPPPPPKKPY--YYHSPPPPPKKPYKYPSPP 537
Query: 453 PAAN---------HPYQHP 462
PA + HP+ HP
Sbjct: 538 PAVHPYPDPHPHPHPHPHP 594
Score = 60.5 bits (145), Expect = 2e-09
Identities = 39/125 (31%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +1
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMM 404
YY++PPPP++ YY P PP P P +K H P
Sbjct: 64 YYHSPPPPKKP--YYYHSPP------------PPSPP-------PPYKKPYYYHSPPPPS 180
Query: 405 PPPQGQ-YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPM 463
PPP + Y++ PP + P Y++ PP PP P Y + PPP PP PY +
Sbjct: 181 PPPPKKPYYYHSPPPPPKKPYYYHSPPPPSPPPPYKKPYYYHSPPPPSPPPPKKPYYYHS 360
Query: 464 QPGSS 468
P S
Sbjct: 361 PPPPS 375
Score = 57.8 bits (138), Expect = 1e-08
Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Frame = +1
Query: 345 YYNNPPPPQ----QERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYG 400
YY++PPPP ++ YY S P PS PP + P K++ +Y
Sbjct: 298 YYHSPPPPSPPPPKKPYYYHSPPP-------PS---PPPPKPYYYHSPPPPPKKKPYYYH 447
Query: 401 RPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQ 460
P PPP+ Y++ PP + P +Y + P V P YP + P P PP HP
Sbjct: 448 SPPPPPPKKPYYYHSPPPPPKKPYKYPSPPPAVHP---YPDPHPHPHPHPHPPYIPHPVY 618
Query: 461 HPMQP 465
H P
Sbjct: 619 HSPPP 633
Score = 49.3 bits (116), Expect = 4e-06
Identities = 23/64 (35%), Positives = 32/64 (49%)
Frame = +1
Query: 402 PMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQH 461
P PPP+ Y++ + PP + P Y++ PP PP P Y + PPP PP PY +
Sbjct: 34 PSPPPPKKPYYY-HSPPPPKKPYYYHSPPPPSPPPPYKKPYYYHSPPPPSPPPPKKPYYY 210
Query: 462 PMQP 465
P
Sbjct: 211 HSPP 222
>TC214546 similar to PIR|T01932|T01932 RNA binding protein homolog - common
tobacco (fragment) {Nicotiana tabacum;} , partial (68%)
Length = 1756
Score = 61.2 bits (147), Expect = 1e-09
Identities = 39/113 (34%), Positives = 59/113 (51%), Gaps = 3/113 (2%)
Frame = +3
Query: 229 TLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLV 288
T++VGGLD+ +++DLR F GE+ SVK+ + + C FV + R+ AE+A + L N V
Sbjct: 1131 TIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGL-NGTV 1307
Query: 289 IKGLRLKLMWGRPQSAK---PESDGLDQARQQASVAHSGLFPRAVISQQQNQD 338
I ++L WGR K +S+G Q H + +QNQD
Sbjct: 1308 IGKQTVRLSWGRSPGNKHWRSDSNGGHYGGHQGYGGHG-------FAVRQNQD 1445
Score = 35.0 bits (79), Expect = 0.076
Identities = 23/84 (27%), Positives = 33/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 381 PSGSGE---NKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQ 437
PS +G+ N+ +QQ Q + Q Q+ YP Q M P Y
Sbjct: 192 PSSNGDLNNNQQGQVQQQQQQWAAAQPHQYQQQWMAMQYPATAMAMMQQQMMMYP-QHYM 368
Query: 438 QYPPQYNAAMPPPQPPAANHPYQH 461
Y + PPP PP ++H + H
Sbjct: 369 PYAHPHYPPPPPPPPPQSSHHHHH 440
>TC224723 hydroxyproline-rich glycoprotein
Length = 2345
Score = 60.8 bits (146), Expect = 1e-09
Identities = 40/127 (31%), Positives = 50/127 (38%), Gaps = 6/127 (4%)
Frame = +1
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY++PPPP++ + YY S P P PP PS +Y
Sbjct: 772 YYHSPPPPKEHVHPPYYYHSPPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYHS 930
Query: 402 PMMP---PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHP 458
P P PP Y+H PP P Y PP PP PP Y PPP P ++ P
Sbjct: 931 PPPPSPSPPPPYYYHSPPPPSPSPPSPYYYKSPP-PPSPSPPPPYYYQSPPPPSPTSHPP 1107
Query: 459 YQHPMQP 465
Y + P
Sbjct: 1108YYYKSPP 1128
Score = 58.2 bits (139), Expect = 8e-09
Identities = 41/128 (32%), Positives = 47/128 (36%), Gaps = 7/128 (5%)
Frame = +1
Query: 345 YYNNPPPPQQERN--YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY++PPPP YY P P PP PS +Y P
Sbjct: 919 YYHSPPPPSPSPPPPYYYHSPP-------PPSPSPPSPYYYKSPPPPSPSPPPPYYYQSP 1077
Query: 403 MMPPPQGQYHHQYY-----PPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANH 457
PPP H YY PP PP Y+ PP PP PP Y+ PPP PA
Sbjct: 1078 --PPPSPTSHPPYYYKSPPPPTSYPPPPYHYVSPP-PPSPSPPPPYHYTSPPPPSPAPAP 1248
Query: 458 PYQHPMQP 465
Y + P
Sbjct: 1249 KYIYKSPP 1272
Score = 56.6 bits (135), Expect = 2e-08
Identities = 42/132 (31%), Positives = 48/132 (35%), Gaps = 6/132 (4%)
Frame = +1
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY +PPPP YY S P + P P P PS +Y
Sbjct: 724 YYKSPPPPSPSPPPPYYYHSPPPPKEHVHPPYYYHSPPPP-------PSPSPPPPYYYKS 882
Query: 402 PMMP---PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHP 458
P P PP Y+H PP PP Y PP PP P Y PPP P+ P
Sbjct: 883 PPPPSPSPPPPYYYHSPPPPSPSPPPPYYYHSPP-PPSPSPPSPYYYKSPPPPSPSPPPP 1059
Query: 459 YQHPMQPGSSQT 470
Y + P S T
Sbjct: 1060YYYQSPPPPSPT 1095
Score = 55.8 bits (133), Expect = 4e-08
Identities = 42/132 (31%), Positives = 52/132 (38%), Gaps = 8/132 (6%)
Frame = +1
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY +PPPP YY S P PS PP P P S +Y +
Sbjct: 871 YYKSPPPPSPSPPPPYYYHSPPP-------PSPSPPP--PYYYHSPPPPSPSPPSPYYYK 1023
Query: 402 ---PMMPPPQGQYHHQYYPPYQ--QYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAAN 456
P P P Y++Q PP +PP Y + PP Y PP Y+ PPP P+
Sbjct: 1024SPPPPSPSPPPPYYYQSPPPPSPTSHPPYYYKSPPPPTSYP--PPPYHYVSPPPPSPSPP 1197
Query: 457 HPYQHPMQPGSS 468
PY + P S
Sbjct: 1198PPYHYTSPPPPS 1233
Score = 51.6 bits (122), Expect = 8e-07
Identities = 39/123 (31%), Positives = 47/123 (37%), Gaps = 5/123 (4%)
Frame = -3
Query: 348 NPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPP 407
+PPPP YY S P PS PP +Y P PPP
Sbjct: 579 SPPPPY----YYKSPPP-------PSPSPPPP-----------------YYYQSP--PPP 490
Query: 408 QGQYHHQYY----PPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHPYQHP 462
H YY PP +PP Y+ PP P PP + + PPP P PA + Y+ P
Sbjct: 489 SPTPHPPYYYKSPPPPTSHPPPYHYVSPPPPSPSPPPPYHYTSPPPPSPAPAPKYIYKSP 310
Query: 463 MQP 465
P
Sbjct: 309 PPP 301
Score = 44.3 bits (103), Expect = 1e-04
Identities = 25/83 (30%), Positives = 34/83 (40%)
Frame = -3
Query: 386 ENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNA 445
E + E+++ + R PPP Y+ PP PP Y PP P +PP Y
Sbjct: 633 ERERERERERERERERERSPPPP-YYYKSPPPPSPSPPPPYYYQSPPPPSPTPHPPYYYK 457
Query: 446 AMPPPQPPAANHPYQHPMQPGSS 468
+ PPP + Y P P S
Sbjct: 456 SPPPPTSHPPPYHYVSPPPPSPS 388
Score = 43.9 bits (102), Expect = 2e-04
Identities = 24/68 (35%), Positives = 30/68 (43%), Gaps = 1/68 (1%)
Frame = -3
Query: 402 PMMPPPQGQYHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQ 460
P P P Y++Q PP P P Y PP P +PP Y+ PPP P+ PY
Sbjct: 543 PPSPSPPPPYYYQSPPPPSPTPHPPYYYKSPPPPT--SHPPPYHYVSPPPPSPSPPPPYH 370
Query: 461 HPMQPGSS 468
+ P S
Sbjct: 369 YTSPPPPS 346
Score = 43.1 bits (100), Expect = 3e-04
Identities = 38/120 (31%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Frame = +1
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPS--QDGPPGGPSG------SGENKPSSEK 393
YY++PPPP YY S P P Q PP P+ P+S
Sbjct: 967 YYHSPPPPSPSPPSPYYYKSPPPPSPSPPPPYYYQSPPPPSPTSHPPYYYKSPPPPTSYP 1146
Query: 394 QQMQHYGRPM--MPPPQGQYHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPP 450
HY P P P YH+ PP P P+Y PP PP Y A PPP
Sbjct: 1147 PPPYHYVSPPPPSPSPPPPYHYTSPPPPSPAPAPKYIYKSPP-------PPVYIYASPPP 1305
Score = 41.6 bits (96), Expect = 8e-04
Identities = 34/109 (31%), Positives = 38/109 (34%), Gaps = 3/109 (2%)
Frame = -3
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPM- 403
YY +PPPP PS P P P P P + HY P
Sbjct: 561 YYKSPPPPS------PSPPPPYYYQSPPPPSPTPHPPYYYKSPPPPTSHPPPYHYVSPPP 400
Query: 404 -MPPPQGQYHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPP 450
P P YH+ PP P P+Y PP PP Y A PPP
Sbjct: 399 PSPSPPPPYHYTSPPPPSPAPAPKYIYKSPP-------PPVYIYASPPP 274
Score = 32.0 bits (71), Expect = 0.65
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 8/60 (13%)
Frame = +1
Query: 417 PPYQQYPPQYNAAMPPVPPYQQ--------YPPQYNAAMPPPQPPAANHPYQHPMQPGSS 468
P Y + PP + + PP Y +PP Y + PPP P+ PY + P S
Sbjct: 718 PYYYKSPPPPSPSPPPPYYYHSPPPPKEHVHPPYYYHSPPPPPSPSPPPPYYYKSPPPPS 897
>TC224645 homologue to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (58%)
Length = 856
Score = 60.5 bits (145), Expect = 2e-09
Identities = 43/129 (33%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Frame = +2
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMM 404
YY +PPPP YY S P PS PP P S +Y +
Sbjct: 8 YYKSPPPPSY---YYKSPPP-------PSPSPPPYYYKSP---PPPSPSPPSPYYYKSPP 148
Query: 405 PPPQGQYHHQYY-----PPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPY 459
PP + YH YY PP PP Y PP PP PP Y PPP P+ PY
Sbjct: 149 PPHKDPYHPPYYYKSPPPPSPSPPPPYYYKSPP-PPSPSPPPPYYYKSPPPPSPSPPPPY 325
Query: 460 QHPMQPGSS 468
+ P S
Sbjct: 326 YYKSPPPPS 352
Score = 56.2 bits (134), Expect = 3e-08
Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Frame = +2
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR--- 401
YY +PPPP PS P P D P P P S +Y +
Sbjct: 470 YYKSPPPPS------PSPPPPYYYKSPPPPDPSPPPPYYYKSPPPPSPSPPPPYYYKSPP 631
Query: 402 -PMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQ 460
P PP Y+ PP PP Y PP PP PP Y PPP P+ PY
Sbjct: 632 PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPP-PPSPSPPPPYYYKSPPPPSPSPPPPYY 808
Query: 461 HPMQPGSS 468
+ P S
Sbjct: 809 YKSPPPPS 832
Score = 56.2 bits (134), Expect = 3e-08
Identities = 38/128 (29%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Frame = +2
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR--- 401
YY +PPPP PS P + P PP P + +Y +
Sbjct: 38 YYKSPPPPS------PSPPPYYYKSPPPPSPSPPSPYYYKSPPPPHKDPYHPPYYYKSPP 199
Query: 402 -PMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQ 460
P PP Y+ PP PP Y PP PP PP Y PPP P+ PY
Sbjct: 200 PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPP-PPSPSPPPPYYYKSPPPPSPSPPPPYY 376
Query: 461 HPMQPGSS 468
+ P S
Sbjct: 377 YKSPPPPS 400
Score = 55.5 bits (132), Expect = 5e-08
Identities = 40/129 (31%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Frame = +2
Query: 345 YYNNPPPPQQERN--YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP YY P P PP PS +Y P
Sbjct: 230 YYKSPPPPSPSPPPPYYYKSPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 388
Query: 403 MMP---PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPY 459
P PP Y+ PP PP Y PP PP PP Y PPP P+ PY
Sbjct: 389 PPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPP-PPSPSPPPPYYYKSPPPPDPSPPPPY 565
Query: 460 QHPMQPGSS 468
+ P S
Sbjct: 566 YYKSPPPPS 592
Score = 55.1 bits (131), Expect = 7e-08
Identities = 40/129 (31%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Frame = +2
Query: 345 YYNNPPPPQQERN--YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP YY P P PP PS +Y P
Sbjct: 278 YYKSPPPPSPSPPPPYYYKSPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 436
Query: 403 MMP---PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPY 459
P PP Y+ PP PP Y PP PP PP Y PPP P+ PY
Sbjct: 437 PPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPP-PPDPSPPPPYYYKSPPPPSPSPPPPY 613
Query: 460 QHPMQPGSS 468
+ P S
Sbjct: 614 YYKSPPPPS 640
Score = 54.7 bits (130), Expect = 9e-08
Identities = 38/120 (31%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Frame = +2
Query: 345 YYNNPPPPQQERN--YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP YY P P PP PS +Y P
Sbjct: 518 YYKSPPPPDPSPPPPYYYKSPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 676
Query: 403 MMP---PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPY 459
P PP Y+ PP PP Y PP PP PP Y PPP P ++ PY
Sbjct: 677 PPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPP-PPSPSPPPPYYYKSPPPPSPVSHPPY 853
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/104 (29%), Positives = 35/104 (32%), Gaps = 5/104 (4%)
Frame = +2
Query: 345 YYNNPPPPQQERN--YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP YY P P PP PS +Y P
Sbjct: 566 YYKSPPPPSPSPPPPYYYKSPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 724
Query: 403 MMP---PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQY 443
P PP Y+ PP PP Y PP P +PP Y
Sbjct: 725 PPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVSHPPYY 856
Score = 28.1 bits (61), Expect = 9.3
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 411 YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHPYQHPMQP 465
Y+++ PP Y P PPY Y + PPP P P + + Y+ P P
Sbjct: 5 YYYKSPPPPSYYYKSPPPPSPSPPPY------YYKSPPPPSPSPPSPYYYKSPPPP 154
>TC214472 similar to PIR|T01932|T01932 RNA binding protein homolog - common
tobacco (fragment) {Nicotiana tabacum;} , partial (29%)
Length = 767
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +1
Query: 229 TLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLV 288
T++VGGLD+ +++DLR F GE+ SVK+ + + C FV + R+ AE+A L N V
Sbjct: 187 TIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHAL-NGTV 363
Query: 289 IKGLRLKLMWGRPQSAK 305
I ++L WGR K
Sbjct: 364 IGKQTVRLSWGRSPGNK 414
>TC224968 similar to UP|Q39835 (Q39835) Extensin, partial (44%)
Length = 681
Score = 59.7 bits (143), Expect = 3e-09
Identities = 39/123 (31%), Positives = 53/123 (42%), Gaps = 6/123 (4%)
Frame = +3
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGP----SGSGENKPSSEKQQMQHYGR 401
Y+ P PP + YY S P P PP P S + P K+ ++
Sbjct: 213 YHYPSPPPPPKYYYHSPPPPSPP---PPSPPPPKKPYYYHSPPPPSPPPPYKKPYYYHSP 383
Query: 402 P--MMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPY 459
P PPP+ Y+H PP + P Y + PP PP ++ P Y + PPP P HP+
Sbjct: 384 PPPSPPPPKPYYYHSPPPPPPKKKPYYYHSPPPPPPKKK--PYYYHSPPPPHPYPHPHPH 557
Query: 460 QHP 462
HP
Sbjct: 558 PHP 566
Score = 58.2 bits (139), Expect = 8e-09
Identities = 43/137 (31%), Positives = 56/137 (40%), Gaps = 20/137 (14%)
Frame = +3
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPG-------GPSGSGENKPSSEKQQMQH 398
Y++PPPP++ YP + P PS PP PS + P +K H
Sbjct: 165 YSSPPPPKK----YPPVSPPYH---YPSPPPPPKYYYHSPPPPSPPPPSPPPPKKPYYYH 323
Query: 399 YGRPMMPPP---QGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAA 455
P PPP + Y+H PP P Y PP PP ++ P Y++ PPP PP
Sbjct: 324 SPPPPSPPPPYKKPYYYHSPPPPSPPPPKPYYYHSPPPPPPKKKPYYYHS--PPPPPPKK 497
Query: 456 N----------HPYQHP 462
HPY HP
Sbjct: 498 KPYYYHSPPPPHPYPHP 548
Score = 55.8 bits (133), Expect = 4e-08
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Frame = +3
Query: 348 NPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPP 407
+PPPP ++ YY S P PS PP P P K++ +Y P PPP
Sbjct: 339 SPPPPYKKPYYYHSPPP-------PSP--PPPKPYYYHSPPPPPPKKKPYYYHSPPPPPP 491
Query: 408 -QGQYHHQYYPPYQQYPPQYNAAMP-PVPPY----QQYPPQYNAAMPPPQPPAANHPYQH 461
+ Y++ PP YP + P P PPY PP+ P P PP ++P+ H
Sbjct: 492 KKKPYYYHSPPPPHPYPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPSPPPPVHHYPHPH 671
Query: 462 P 462
P
Sbjct: 672 P 674
Score = 50.1 bits (118), Expect = 2e-06
Identities = 42/150 (28%), Positives = 53/150 (35%), Gaps = 29/150 (19%)
Frame = +3
Query: 345 YYNNPPPPQ---------QERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQ 395
YY++PPPP ++ YY S P PS P P P S
Sbjct: 249 YYHSPPPPSPPPPSPPPPKKPYYYHSPPP-------PSPPPPYKKPYYYHSPPPPSPPPP 407
Query: 396 MQHYGRPMMPPPQGQ---YHHQYYPPYQQYPPQYNAAMPPVPPY---------QQYPPQY 443
+Y PPP + Y+H PP + P Y + PP PY +PP
Sbjct: 408 KPYYYHSPPPPPPKKKPYYYHSPPPPPPKKKPYYYHSPPPPHPYPHPHPHPHPHPHPPYV 587
Query: 444 NAAMPP--------PQPPAANHPYQHPMQP 465
+ PP P PP H Y HP P
Sbjct: 588 YPSPPPPPKKPYKYPSPPPPVHHYPHPHPP 677
Score = 43.5 bits (101), Expect = 2e-04
Identities = 25/70 (35%), Positives = 30/70 (42%)
Frame = +3
Query: 399 YGRPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHP 458
Y P PPP Y+H PP PP PP PP + P Y++ PP PP P
Sbjct: 213 YHYPSPPPPPKYYYHSPPPPS---PP------PPSPPPPKKPYYYHSPPPPSPPPPYKKP 365
Query: 459 YQHPMQPGSS 468
Y + P S
Sbjct: 366 YYYHSPPPPS 395
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/61 (34%), Positives = 27/61 (43%), Gaps = 3/61 (4%)
Frame = +3
Query: 411 YHHQYYPPYQQYPP---QYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGS 467
Y + PP ++YPP Y+ PP PP Y + PPP PP PY + P
Sbjct: 159 YLYSSPPPPKKYPPVSPPYHYPSPPPPPKYYYHSPPPPSPPPPSPPPPKKPYYYHSPPPP 338
Query: 468 S 468
S
Sbjct: 339 S 341
>TC204044 homologue to UP|Q09083 (Q09083) Hydroxyproline-rich glycoprotein
precursor, partial (38%)
Length = 1080
Score = 59.7 bits (143), Expect = 3e-09
Identities = 41/135 (30%), Positives = 53/135 (38%), Gaps = 14/135 (10%)
Frame = +2
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP-- 402
YY +PPPP +E YPS P P P PS ++ P
Sbjct: 50 YYKSPPPPPKEPYKYPSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPP 229
Query: 403 ----MMPPPQGQYHHQYYPPYQQYPP-----QYNAAMPPVPPYQQYPPQYNAAMPPPQP- 452
PPP +Y PPY+ P +Y + PPV Y+ PP Y PPP P
Sbjct: 230 VYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYPSPPPPPY 409
Query: 453 --PAANHPYQHPMQP 465
P+ PY++P P
Sbjct: 410 KYPSPPPPYKYPSPP 454
Score = 50.4 bits (119), Expect = 2e-06
Identities = 42/137 (30%), Positives = 51/137 (36%), Gaps = 16/137 (11%)
Frame = +2
Query: 345 YYNNPPPPQQE---RNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY++PPPP+ YY S P PP S Y
Sbjct: 2 YYHSPPPPKHSPPPPYYYKSPPPPPKEPYKYPSPPPPVYKYKSPPPPYKYPSPPPPPYKY 181
Query: 402 PMMPPPQGQYHHQYYPP----YQQYPPQYNAAMPPVPPYQ---QYPPQYNAAMPPP---- 450
P PPP Y ++ PP Y+ PP Y PP PPY+ PP Y PPP
Sbjct: 182 PSPPPP--VYKYKSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYK 355
Query: 451 --QPPAANHPYQHPMQP 465
PP PY++P P
Sbjct: 356 YKSPPP---PYKYPSPP 397
Score = 48.1 bits (113), Expect = 9e-06
Identities = 41/130 (31%), Positives = 49/130 (37%), Gaps = 10/130 (7%)
Frame = +2
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMP 405
Y +PPPP + YPS P P P P + P Y P P
Sbjct: 356 YKSPPPPYK----YPSPPP-------PPYKYPSPPPPYKYPSPPPPP------YKYPSPP 484
Query: 406 PPQGQYHHQYYPP----YQQYPPQYNAAMPPVPPYQ---QYPPQYNAAMPPP---QPPAA 455
PP Y ++ PP Y+ PP Y PP PPY+ PP Y PPP PP
Sbjct: 485 PPV--YKYKSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVHSPPPP 658
Query: 456 NHPYQHPMQP 465
+ Y P P
Sbjct: 659 VYIYASPPPP 688
Score = 45.1 bits (105), Expect = 7e-05
Identities = 42/137 (30%), Positives = 52/137 (37%), Gaps = 17/137 (12%)
Frame = +2
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPS---SEKQQMQHYGRP 402
Y +PPPP + YPS P P + P P ++ P K Y P
Sbjct: 239 YKSPPPPYK----YPSPPPP------PYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYP 388
Query: 403 MMPPPQGQYHHQYYPPYQQYP----PQYNAAMPPVPPYQQY---PPQYNAAMPPPQ---- 451
PPP Y + PP +YP P Y PP P Y+ PP Y PPP
Sbjct: 389 SPPPPP--YKYPSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYP 562
Query: 452 ---PPAANHPYQHPMQP 465
PP PY++P P
Sbjct: 563 SPPPP----PYKYPSPP 601
Score = 36.2 bits (82), Expect = 0.034
Identities = 31/104 (29%), Positives = 41/104 (38%), Gaps = 5/104 (4%)
Frame = +2
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPS---SEKQQMQHYGRP 402
Y +PPPP + YPS P P + P P ++ P K Y P
Sbjct: 413 YPSPPPPYK----YPSPPPP------PYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYP 562
Query: 403 MMPPPQGQYHHQYYP--PYQQYPPQYNAAMPPVPPYQQYPPQYN 444
PPP +Y P Y+ PP ++ PPV Y PP Y+
Sbjct: 563 SPPPPPYKYPSPPPPVYKYKSPPPPVHSPPPPVYIYASPPPPYH 694
>BQ741699 homologue to GP|3204132|emb extensin {Cicer arietinum}, partial
(69%)
Length = 431
Score = 59.3 bits (142), Expect = 4e-09
Identities = 38/125 (30%), Positives = 50/125 (39%), Gaps = 4/125 (3%)
Frame = +3
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR--- 401
YY +PPPP PS P P P P P S +Y +
Sbjct: 15 YYKSPPPPS------PSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPP 176
Query: 402 PMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHPYQ 460
P P P Y+++ PP +PP Y+ PP P PP + + PPP P PA + Y+
Sbjct: 177 PPSPSPPSLYYYKSPPPPTSHPPPYHYVSPPPPSPSPPPPYHYTSPPPPSPAPAPKYIYK 356
Query: 461 HPMQP 465
P P
Sbjct: 357 SPPPP 371
Score = 41.6 bits (96), Expect = 8e-04
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 402 PMMPPPQGQYHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHPY 459
P P P Y+++ PP P P Y PP P PP Y + PPP P P + + Y
Sbjct: 33 PPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPSLYYY 212
Query: 460 QHPMQPGS 467
+ P P S
Sbjct: 213 KSPPPPTS 236
Score = 41.6 bits (96), Expect = 8e-04
Identities = 34/122 (27%), Positives = 41/122 (32%), Gaps = 14/122 (11%)
Frame = +3
Query: 345 YYNNPPPPQQ--ERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP + YY P P PP PS + +Y P
Sbjct: 63 YYKSPPPPSPVPKPPYYYHSPP-------PPSPSPPPPYYYKSPPPPSPSPPSLYYYKSP 221
Query: 403 MMPPPQGQYHHQYY----PPYQQYPPQYNAAMPPVPP--------YQQYPPQYNAAMPPP 450
PPP +Y PP PP Y+ PP P Y+ PP PP
Sbjct: 222 --PPPTSHPPPYHYVSPPPPSPSPPPPYHYTSPPPPSPAPAPKYIYKSPPPPVYIYASPP 395
Query: 451 QP 452
P
Sbjct: 396 PP 401
Score = 35.8 bits (81), Expect = 0.045
Identities = 20/58 (34%), Positives = 24/58 (40%)
Frame = +3
Query: 411 YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSS 468
Y+ PP PP Y PP P PP Y + PPP P + PY + P S
Sbjct: 15 YYKSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSP-SPPPPYYYKSPPPPS 185
Score = 34.7 bits (78), Expect = 0.100
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 411 YHHQYYPPYQQYPPQ--YNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHPYQHPMQPGS 467
Y+++ PP PP Y + PP P + PP Y + PPP P P + Y+ P P
Sbjct: 12 YYYKSPPPPSPSPPPPYYYKSPPPPSPVPK-PPYYYHSPPPPSPSPPPPYYYKSPPPPSP 188
Query: 468 SQTGSGQAGSAPAET 482
S S P T
Sbjct: 189 SPPSLYYYKSPPPPT 233
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.314 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,192,662
Number of Sequences: 63676
Number of extensions: 520993
Number of successful extensions: 12111
Number of sequences better than 10.0: 871
Number of HSP's better than 10.0 without gapping: 4579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6913
length of query: 492
length of database: 12,639,632
effective HSP length: 101
effective length of query: 391
effective length of database: 6,208,356
effective search space: 2427467196
effective search space used: 2427467196
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Medicago: description of AC146743.13