TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146721.5 - phase: 0 /pseudo
         (59 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC231018 homologue to UP|O22111 (O22111) 6-phosphogluconate dehy...    79  6e-16
TC215518 homologue to UP|O22111 (O22111) 6-phosphogluconate dehy...    70  2e-13
AW760460 weakly similar to GP|15983434|gb| AT3g02360/F11A12_104 ...    64  1e-11
TC223481 similar to UP|Q9FFR3 (Q9FFR3) 6-phosphogluconate dehydr...    51  1e-07
TC206822 homologue to UP|Q9SH69 (Q9SH69) F22C12.5 (At1g64190), p...    42  8e-05
BQ133641                                                               33  0.030

>TC231018 homologue to UP|O22111 (O22111) 6-phosphogluconate dehydrogenase  ,
           partial (18%)
          Length = 503

 Score = 78.6 bits (192), Expect = 6e-16
 Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 13/72 (18%)
 Frame = +3

Query: 1   MATSEPTNLARIGLA---VIGQNLALNIAEKGFQFQF----------TIERAKQEGNLPI 47
           +  ++P +L RIGLA   V+GQNLALNIAEKGF              T+ERAKQEGNLP+
Sbjct: 123 LTMAQPASLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDETVERAKQEGNLPV 302

Query: 48  YGYHDFKYFVQS 59
           YGYHD K+FVQS
Sbjct: 303 YGYHDPKFFVQS 338


>TC215518 homologue to UP|O22111 (O22111) 6-phosphogluconate dehydrogenase  ,
           complete
          Length = 1785

 Score = 70.5 bits (171), Expect = 2e-13
 Identities = 37/63 (58%), Positives = 42/63 (65%), Gaps = 10/63 (15%)
 Frame = +1

Query: 7   TNLARIGLAVIGQNLALNIAEKGFQFQF----------TIERAKQEGNLPIYGYHDFKYF 56
           T +   GLAV+GQNLALNIAEKGF              T+ERAKQEGNLP+YGYHD + F
Sbjct: 70  TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPVYGYHDPEAF 249

Query: 57  VQS 59
           V S
Sbjct: 250 VHS 258


>AW760460 weakly similar to GP|15983434|gb| AT3g02360/F11A12_104
          {Arabidopsis thaliana}, partial (18%)
          Length = 361

 Score = 64.3 bits (155), Expect = 1e-11
 Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 13/69 (18%)
 Frame = +2

Query: 4  SEPTNLARIGLA---VIGQNLALNIAEKGFQFQF----------TIERAKQEGNLPIYGY 50
          ++P +L RIGLA   V+GQNLALNIAEKGF              T++ AKQ+ NLPIY Y
Sbjct: 2  AQPASLTRIGLAGLAVMGQNLALNIAEKGFPISVYNQTTSKVYDTLKIAKQKRNLPIYSY 181

Query: 51 HDFKYFVQS 59
          H+ K+F+QS
Sbjct: 182HNPKFFIQS 208


>TC223481 similar to UP|Q9FFR3 (Q9FFR3) 6-phosphogluconate dehydrogenase
           (AT5g41670/MBK23_20), partial (24%)
          Length = 469

 Score = 50.8 bits (120), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 13/68 (19%)
 Frame = +3

Query: 5   EPTNLARIGLA---VIGQNLALNIAEKGFQFQF----------TIERAKQEGNLPIYGYH 51
           E   L+RIGLA   V+GQNLALNIAEKGF              T++RA+ EG+LP+ G +
Sbjct: 96  ESAALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDQTVDRARNEGSLPLTGQY 275

Query: 52  DFKYFVQS 59
             + FV S
Sbjct: 276 TPRDFVLS 299


>TC206822 homologue to UP|Q9SH69 (Q9SH69) F22C12.5 (At1g64190), partial
          (28%)
          Length = 645

 Score = 41.6 bits (96), Expect = 8e-05
 Identities = 23/40 (57%), Positives = 28/40 (69%), Gaps = 3/40 (7%)
 Frame = +1

Query: 5  EPTNLARIGLA---VIGQNLALNIAEKGFQFQFTIERAKQ 41
          E   L+RIGLA   V+GQNLALNIAEKGF     ++R K+
Sbjct: 40 ESAALSRIGLAGLAVMGQNLALNIAEKGFPISVFLDRIKK 159


>BQ133641 
          Length = 389

 Score = 33.1 bits (74), Expect = 0.030
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +1

Query: 5   EPTNLARIGLAVIGQNLALNIAEKG 29
           +   +  IGL V+G NLALNIAEKG
Sbjct: 232 QQAEIGLIGLGVMGSNLALNIAEKG 306


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.321    0.138    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,888,386
Number of Sequences: 63676
Number of extensions: 14062
Number of successful extensions: 59
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of query: 59
length of database: 12,639,632
effective HSP length: 35
effective length of query: 24
effective length of database: 10,410,972
effective search space: 249863328
effective search space used: 249863328
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)