BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146651.13 - phase: 0
(274 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC227452 UP|Q9XGS2 (Q9XGS2) Ni-binding urease accessory protein ... 498 e-142
TC229037 similar to GB|AAM16226.1|20334730|AY093965 At1g15730/F7... 55 3e-08
TC220507 similar to UP|Q7Q3J9 (Q7Q3J9) AgCP11343 (Fragment), par... 42 4e-04
TC207277 weakly similar to UP|Q7CV43 (Q7CV43) AGR_L_732p, partia... 40 0.001
BE661545 40 0.001
TC224249 UP|Q9XGS2 (Q9XGS2) Ni-binding urease accessory protein ... 39 0.003
TC207822 similar to UP|HKL2_MALDO (O04135) Homeobox protein knot... 39 0.003
BE661668 similar to GP|10177706|dbj contains similarity to RNA-b... 37 0.013
TC213859 similar to UP|IAR1_ARATH (Q9M647) IAA-alanine resistanc... 36 0.016
TC230667 weakly similar to UP|AGA1_YEAST (P32323) A-agglutinin a... 36 0.016
TC216622 36 0.016
TC232402 homologue to UP|Q75I55 (Q75I55) Expressed protein, part... 36 0.021
TC231117 similar to UP|Q7QH40 (Q7QH40) AgCP8016 (Fragment), part... 36 0.021
TC205359 homologue to GB|AAM64579.1|21592630|AY087018 silencing ... 35 0.028
TC214464 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 35 0.037
TC204100 homologue to UP|Q93WA5 (Q93WA5) Ribosomal protein L32, ... 35 0.037
BI320685 similar to GP|22833094|gb| CG32666-PB {Drosophila melan... 35 0.037
TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, co... 35 0.037
TC211009 35 0.037
TC234824 similar to UP|Q9I7K2 (Q9I7K2) CG4655-PA, partial (4%) 35 0.048
>TC227452 UP|Q9XGS2 (Q9XGS2) Ni-binding urease accessory protein UreG,
complete
Length = 1145
Score = 498 bits (1283), Expect = e-142
Identities = 246/285 (86%), Positives = 259/285 (90%), Gaps = 11/285 (3%)
Frame = +3
Query: 1 MASGGDHTHVH----DHDHHHHDHDHKHG-------DSFIGADGKVYHSHDGLAPHSHEP 49
MAS GDH H H DHDHHHHDHDH H +S++G DGKVYHSHDGLAPHSHEP
Sbjct: 123 MASEGDHHHHHHHHQDHDHHHHDHDHHHHHDGEGETNSWVGKDGKVYHSHDGLAPHSHEP 302
Query: 50 IYSPGFFSRRAQPLINRDFNERAFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDI 109
IYSPG+F+RRA PL+NR+FNERAFTVGIGGPVGTGKTALMLALC+ LR+ YSLAAVTNDI
Sbjct: 303 IYSPGYFTRRAPPLLNRNFNERAFTVGIGGPVGTGKTALMLALCELLRENYSLAAVTNDI 482
Query: 110 FTKEDGEFLVKHKALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLYKADLLLCES 169
FTKEDGEFLVKHKALPEERIRAVETGGCPHAAIREDISINLGPLEELSNL+KAD+LLCES
Sbjct: 483 FTKEDGEFLVKHKALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADILLCES 662
Query: 170 GGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGV 229
GGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA AIGADL V
Sbjct: 663 GGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAPAIGADLAV 842
Query: 230 MERDALRMRDGGPFVFAQVKHNVGVEEIVNHVLQAWEAATGKKRH 274
M+RDALRMRDGGPFVFAQVKH +GVEEI N VLQAWEAATG KRH
Sbjct: 843 MQRDALRMRDGGPFVFAQVKHKIGVEEIGNLVLQAWEAATGNKRH 977
>TC229037 similar to GB|AAM16226.1|20334730|AY093965 At1g15730/F7H2_7
{Arabidopsis thaliana;} , partial (52%)
Length = 958
Score = 55.1 bits (131), Expect = 3e-08
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = +3
Query: 6 DHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSPGFFS 57
DH H HDH+H HHDHDH H D D H H+ HSH+ + PG S
Sbjct: 342 DHDHSHDHEHEHHDHDHHHHDH----DHSHDHKHEHHDHHSHDHSHDPGVSS 485
Score = 35.8 bits (81), Expect = 0.021
Identities = 15/29 (51%), Positives = 16/29 (54%), Gaps = 5/29 (17%)
Frame = +3
Query: 6 DHTHVHDH-----DHHHHDHDHKHGDSFI 29
DH H HDH DHH HDH H G S +
Sbjct: 402 DHDHSHDHKHEHHDHHSHDHSHDPGVSSV 488
>TC220507 similar to UP|Q7Q3J9 (Q7Q3J9) AgCP11343 (Fragment), partial (3%)
Length = 829
Score = 41.6 bits (96), Expect = 4e-04
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -2
Query: 7 HTHVHDHDHH----HHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSP 53
HTH H H HH HH H H HGDS + +G + L P HE + +P
Sbjct: 441 HTHHHPHHHHYHHPHHHHQHHHGDSDVDDNGSGDFLNPILVP-IHEDLVNP 292
Score = 30.4 bits (67), Expect = 0.90
Identities = 23/72 (31%), Positives = 32/72 (43%), Gaps = 4/72 (5%)
Frame = +3
Query: 3 SGGDHTHVHDHDHHHH----DHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSPGFFSR 58
SG ++ H H HH+H D D GD+ G D Y D L P + S F +
Sbjct: 327 SGLENHHYRYHQHHYHHDDVDDDDVGGDNDDGEDDDGYGLDDELVPWN----VSNKFERQ 494
Query: 59 RAQPLINRDFNE 70
R + L R F++
Sbjct: 495 RMRKLGKRAFSK 530
>TC207277 weakly similar to UP|Q7CV43 (Q7CV43) AGR_L_732p, partial (6%)
Length = 980
Score = 39.7 bits (91), Expect = 0.001
Identities = 21/44 (47%), Positives = 26/44 (58%), Gaps = 4/44 (9%)
Frame = +3
Query: 2 ASGGDHTHVHDHDH-HHHDH---DHKHGDSFIGADGKVYHSHDG 41
+SG DH H H HDH H HDH H HG +++ A G + H H G
Sbjct: 453 SSGHDHHHHHSHDHGHGHDHYGDAHIHGANYMDAYG-LGHGHHG 581
>BE661545
Length = 676
Score = 39.7 bits (91), Expect = 0.001
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 14/50 (28%)
Frame = +3
Query: 6 DHTHVHDHDHHHH--------DHDHKHGD------SFIGADGKVYHSHDG 41
DH H H+H HHHH DHDH GD G D ++ + HDG
Sbjct: 195 DHYHNHNHHHHHHHNHHHDFDDHDHNCGDDNQDHNDNHGYDHQIQNPHDG 344
Score = 32.3 bits (72), Expect = 0.24
Identities = 17/58 (29%), Positives = 29/58 (49%), Gaps = 8/58 (13%)
Frame = -2
Query: 5 GDHTHVHDHD----HHHHDHDHKHGDSFIGADGK----VYHSHDGLAPHSHEPIYSPG 54
GDH H + +D HH++D DH++ D DG + H+ ++H+ Y+ G
Sbjct: 321 GDHNHDYHYDLDCHHHNYDRDHQNHDDDCDDDGDDDCGYDNDHNSDWDYNHDRNYNDG 148
Score = 27.7 bits (60), Expect = 5.8
Identities = 11/38 (28%), Positives = 18/38 (46%)
Frame = +3
Query: 9 HVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHS 46
H +DH H+H+ H H H + D ++ D H+
Sbjct: 186 HYYDHYHNHNHHHHHHHNHHHDFDDHDHNCGDDNQDHN 299
>TC224249 UP|Q9XGS2 (Q9XGS2) Ni-binding urease accessory protein UreG,
partial (7%)
Length = 379
Score = 38.5 bits (88), Expect = 0.003
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 252 VGVEEIVNHVLQAWEAATGKKRH 274
+GVEEI N VLQAWEAATG RH
Sbjct: 72 IGVEEIGNLVLQAWEAATGN*RH 140
Score = 32.3 bits (72), Expect = 0.24
Identities = 16/24 (66%), Positives = 18/24 (74%), Gaps = 2/24 (8%)
Frame = -1
Query: 244 VFAQVKHNVGVEEIVNHVL--QAW 265
+FAQVKH +GVEEI N VL AW
Sbjct: 73 IFAQVKHKIGVEEIGNLVLHPDAW 2
>TC207822 similar to UP|HKL2_MALDO (O04135) Homeobox protein knotted-1 like 2
(KNAP2), partial (45%)
Length = 1118
Score = 38.5 bits (88), Expect = 0.003
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 2 ASGGDHTHVHDHDHHHHDHDHK 23
ASGG+H H H H HHH H H+
Sbjct: 332 ASGGNHNHQHQHHSHHHHHHHQ 397
>BE661668 similar to GP|10177706|dbj contains similarity to RNA-binding
protein~gene_id:MPL12.3 {Arabidopsis thaliana}, partial
(13%)
Length = 554
Score = 36.6 bits (83), Expect = 0.013
Identities = 18/43 (41%), Positives = 20/43 (45%)
Frame = +1
Query: 6 DHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHE 48
D H HDHD H HDH+H+H H HD H HE
Sbjct: 190 DEEHDHDHD-HDHDHEHEH-----------EHDHDLEHDHEHE 282
Score = 36.6 bits (83), Expect = 0.013
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 1 MASGGDHTHVHDHDH-HHHDHDHKH 24
+ S +H H HDHDH H H+H+H H
Sbjct: 181 LISDEEHDHDHDHDHDHEHEHEHDH 255
Score = 29.6 bits (65), Expect = 1.5
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = +1
Query: 6 DHTHVHDHDHHHHDHDH 22
+H H H+HDHH DH
Sbjct: 262 EHDHEHEHDHHEDRDDH 312
Score = 27.7 bits (60), Expect = 5.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 6 DHTHVHDHDHHHHDHDHKHGDSFIGA 31
DH HDH+H H H+ + + + A
Sbjct: 250 DHDLEHDHEHEHDHHEDRDDHAAVAA 327
Score = 26.9 bits (58), Expect = 10.0
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +1
Query: 6 DHTHVHD--HDH-HHHDHDHKHGD 26
+H H HD HDH H HDH D
Sbjct: 238 EHEHDHDLEHDHEHEHDHHEDRDD 309
>TC213859 similar to UP|IAR1_ARATH (Q9M647) IAA-alanine resistance protein 1,
partial (39%)
Length = 652
Score = 36.2 bits (82), Expect = 0.016
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 7/36 (19%)
Frame = +3
Query: 2 ASGGDHTHVH----DHDHHH---HDHDHKHGDSFIG 30
A GG+H+H H DHDHH HDH H D IG
Sbjct: 501 AFGGEHSHSHGDHGDHDHHDSSGHDHAHSLADLSIG 608
Score = 32.3 bits (72), Expect = 0.24
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 9 HVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSPGF 55
H H D HHHDH H H + D + + LA +Y GF
Sbjct: 126 HNHCGDDHHHDHGHAHDHNKDKIDARSKLLPEELAEEEDMKLYGFGF 266
Score = 26.9 bits (58), Expect = 10.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 7 HTHVHDHDHHHHDHDHKH 24
H H H HD HH D+ H
Sbjct: 174 HAHGHGHDDGHHRSDYGH 121
>TC230667 weakly similar to UP|AGA1_YEAST (P32323) A-agglutinin attachment
subunit precursor, partial (5%)
Length = 865
Score = 36.2 bits (82), Expect = 0.016
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 6 DHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAP-HSHEPI 50
+HTH H H +HH + H HGD+ G+D + LAP H H +
Sbjct: 424 NHTHRHPHHYHHRPYHHHHGDN--GSDDD--FPNPNLAPIHQHHHV 549
Score = 27.3 bits (59), Expect = 7.6
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = -1
Query: 11 HDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSPGFFSRRAQPLINRDFNE 70
H H H+HHD D GD D Y D L P + S F +R + L R F++
Sbjct: 502 HHHYHYHHDDDDMGGDD-NDEDDDGYGLDDELVPWN----VSNKFGRQRMRKLGKRAFSK 338
>TC216622
Length = 455
Score = 36.2 bits (82), Expect = 0.016
Identities = 11/35 (31%), Positives = 20/35 (56%)
Frame = +1
Query: 9 HVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLA 43
H+H H +HHH H H H + + +G H+ + ++
Sbjct: 220 HLHHHHNHHHHHHHHHNPNNLPLEGSTSHTSNSVS 324
>TC232402 homologue to UP|Q75I55 (Q75I55) Expressed protein, partial (18%)
Length = 1098
Score = 35.8 bits (81), Expect = 0.021
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 7 HTHVHDHDHHHHDHDHKH 24
H H HDHDH HH DH H
Sbjct: 350 HHHPHDHDHDHHQLDHHH 297
>TC231117 similar to UP|Q7QH40 (Q7QH40) AgCP8016 (Fragment), partial (6%)
Length = 805
Score = 35.8 bits (81), Expect = 0.021
Identities = 16/45 (35%), Positives = 19/45 (41%)
Frame = +2
Query: 7 HTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIY 51
H H H H HHHH H H H +HSH H H ++
Sbjct: 203 HPHPHHHHHHHHHHHHHHH----------HHSH-----HHHAHVF 292
Score = 34.7 bits (78), Expect = 0.048
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 3 SGGDHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSH 47
S H H H HHHH H H H +H H H+H
Sbjct: 185 SPASQPHPHPHHHHHHHHHHHH-----------HHHHHSHHHHAH 286
>TC205359 homologue to GB|AAM64579.1|21592630|AY087018 silencing group B
protein {Arabidopsis thaliana;} , partial (92%)
Length = 830
Score = 35.4 bits (80), Expect = 0.028
Identities = 12/31 (38%), Positives = 15/31 (47%)
Frame = +1
Query: 4 GGDHTHVHDHDHHHHDHDHKHGDSFIGADGK 34
G H H H + HHHH H H+H + K
Sbjct: 532 GKQHHHHHHNHHHHHHHHHEHSGGCCSGEAK 624
>TC214464 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 805
Score = 35.0 bits (79), Expect = 0.037
Identities = 14/29 (48%), Positives = 18/29 (61%)
Frame = -1
Query: 3 SGGDHTHVHDHDHHHHDHDHKHGDSFIGA 31
S H H+H+H HHHH H H +SF+ A
Sbjct: 511 SAATHHHLHNH-HHHHHIKHAHHESFLPA 428
>TC204100 homologue to UP|Q93WA5 (Q93WA5) Ribosomal protein L32, complete
Length = 1145
Score = 35.0 bits (79), Expect = 0.037
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 7 HTHVHDHDHHH-HDHDHKHGDSFIGADGKVYHSHDGLAPHSH 47
H H H H HHH H H+H+HG G + H H H H
Sbjct: 234 HRHNHHHHHHHSHRHNHRHG---YGIHHRHRHRHYDHHIHRH 350
Score = 26.9 bits (58), Expect = 10.0
Identities = 13/41 (31%), Positives = 17/41 (40%)
Frame = +3
Query: 15 HHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSPGF 55
HHHH H+ HG H+H HSH + G+
Sbjct: 195 HHHHHHESNHGLCH-------RHNHHHHHHHSHRHNHRHGY 296
>BI320685 similar to GP|22833094|gb| CG32666-PB {Drosophila melanogaster},
partial (2%)
Length = 298
Score = 35.0 bits (79), Expect = 0.037
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 1 MASGGDHTHVHDHDHHHHDHDHKHGD 26
M + H H H DHHHH DH H D
Sbjct: 214 MVTAKSHHHHHHMDHHHHHMDHHHMD 137
>TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, complete
Length = 1937
Score = 35.0 bits (79), Expect = 0.037
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 7 HTHVHDHDHHH-HDHDHKHGDSFIGADGKVYHSHDGLAPHSH 47
H H H H HHH H H+H+HG G + H H H H
Sbjct: 1643 HRHNHHHHHHHSHRHNHRHG---YGIHHRHRHRHYDHHIHRH 1527
Score = 26.9 bits (58), Expect = 10.0
Identities = 13/41 (31%), Positives = 17/41 (40%)
Frame = -1
Query: 15 HHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSPGF 55
HHHH H+ HG H+H HSH + G+
Sbjct: 1682 HHHHHHESNHGLCH-------RHNHHHHHHHSHRHNHRHGY 1581
>TC211009
Length = 401
Score = 35.0 bits (79), Expect = 0.037
Identities = 13/31 (41%), Positives = 18/31 (57%), Gaps = 7/31 (22%)
Frame = +2
Query: 1 MASGGDHTHVHDHDHHH-------HDHDHKH 24
+ S +H H HDH+H H HDH+H+H
Sbjct: 206 LISDEEHDHDHDHEHEHEHDHDLEHDHEHEH 298
Score = 29.6 bits (65), Expect = 1.5
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = +2
Query: 6 DHTHVHDHDHHHHDHDH 22
+H H H+HDHH DH
Sbjct: 275 EHDHEHEHDHHEDRDDH 325
Score = 28.1 bits (61), Expect = 4.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 12 DHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHE 48
+HDH H DH+H+H H HD H HE
Sbjct: 221 EHDHDH-DHEHEH-----------EHDHDLEHDHEHE 295
Score = 27.7 bits (60), Expect = 5.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 6 DHTHVHDHDHHHHDHDHKHGDSFIGA 31
DH HDH+H H H+ + + + A
Sbjct: 263 DHDLEHDHEHEHDHHEDRDDHAAVAA 340
Score = 26.9 bits (58), Expect = 10.0
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +2
Query: 6 DHTHVHD--HDH-HHHDHDHKHGD 26
+H H HD HDH H HDH D
Sbjct: 251 EHEHDHDLEHDHEHEHDHHEDRDD 322
>TC234824 similar to UP|Q9I7K2 (Q9I7K2) CG4655-PA, partial (4%)
Length = 426
Score = 34.7 bits (78), Expect = 0.048
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 7 HTHVHDHDHHHHDHDHKH 24
H H H H HHHH H H H
Sbjct: 360 HHHRHHHHHHHHHHHHHH 413
Score = 34.3 bits (77), Expect = 0.062
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 7 HTHVHDHDHHHHDHDHKH 24
H H H H HHHH H H H
Sbjct: 354 HHHHHRHHHHHHHHHHHH 407
Score = 31.6 bits (70), Expect = 0.40
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 7 HTHVHDHDHHHHDHDHKH 24
H H H HHHH H H H
Sbjct: 357 HHHHRHHHHHHHHHHHHH 410
Score = 31.6 bits (70), Expect = 0.40
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 7 HTHVHDHDHHHHDHDHKH 24
H H H H HHHH H H H
Sbjct: 366 HRH-HHHHHHHHHHHHHH 416
Score = 27.7 bits (60), Expect = 5.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 7 HTHVHDHDHHHHDHDHKH 24
H+ + H HH H H H H
Sbjct: 339 HSMIKHHHHHRHHHHHHH 392
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,676,632
Number of Sequences: 63676
Number of extensions: 218807
Number of successful extensions: 4993
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 2186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3654
length of query: 274
length of database: 12,639,632
effective HSP length: 96
effective length of query: 178
effective length of database: 6,526,736
effective search space: 1161759008
effective search space used: 1161759008
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146651.13