TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146590.2 + phase: 0 
         (313 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC215035 similar to GB|AAL05900.1|15777879|AY055100 AT3g15640/MS...    35  0.044
TC211277                                                               29  3.1
TC229552 homologue to UP|Q9SGQ0 (Q9SGQ0) F3M18.4 (Transcription ...    27  9.2
TC207192                                                               27  9.2
TC207193                                                               27  9.2

>TC215035 similar to GB|AAL05900.1|15777879|AY055100 AT3g15640/MSJ11_4
           {Arabidopsis thaliana;} , partial (59%)
          Length = 753

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 17/35 (48%), Positives = 21/35 (59%)
 Frame = -2

Query: 266 LIGGRVKLILSNWPSLKKILPRNNGRLDLHTHKDH 300
           L GG V L+ +N+ S  K+    NG  DLH HKDH
Sbjct: 545 LKGGNVSLLFANFISEGKLRDAINGDHDLHVHKDH 441


>TC211277 
          Length = 968

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/19 (57%), Positives = 12/19 (62%)
 Frame = +2

Query: 104 PLYICDGYPSLARTPFGEH 122
           PLY+CD YPS    P  EH
Sbjct: 911 PLYLCDQYPSPXCNPLTEH 967


>TC229552 homologue to UP|Q9SGQ0 (Q9SGQ0) F3M18.4 (Transcription factor
            AtVOZ1), partial (27%)
          Length = 1520

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -3

Query: 143  CALIDYAPG--TTNDKILSGPMKITDMFPFFKDTVFERGLD 181
            CA +  +PG   T   I +GP+++   FP+F D   E GLD
Sbjct: 1206 CAPLHSSPGLTVTGTSIEAGPVQMK*SFPYFSDK--EPGLD 1090


>TC207192 
          Length = 1307

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 143 CALIDYAPG--TTNDKILSGPMKITDMFPFFKDTVFERGLD 181
           CA +  +PG   T   I +GP+++   FP+F D   E GLD
Sbjct: 997 CAPLHSSPGLTVTGTSIEAGPVQMK*SFPYFSDK--EPGLD 881


>TC207193 
          Length = 484

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 143 CALIDYAPG--TTNDKILSGPMKITDMFPFFKDTVFERGLD 181
           CA +  +PG   T   I +GP+++   FP+F D   E GLD
Sbjct: 343 CAPLHSSPGFTVTGTSIEAGPVQMK*SFPYFSDK--EPGLD 459


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.319    0.139    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,271,761
Number of Sequences: 63676
Number of extensions: 180286
Number of successful extensions: 676
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of query: 313
length of database: 12,639,632
effective HSP length: 97
effective length of query: 216
effective length of database: 6,463,060
effective search space: 1396020960
effective search space used: 1396020960
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)