BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146588.6 - phase: 0 /pseudo
(670 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BU090312 176 3e-44
BE191307 112 7e-25
BE346460 67 2e-11
TC214362 weakly similar to UP|Q7K0Y2 (Q7K0Y2) LD23217p, partial ... 42 7e-04
TC219663 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD pro... 42 0.001
BQ611667 similar to GP|29421114|dbj ADP-glucose pyrophosphorylas... 40 0.004
TC233073 similar to UP|Q6NMK7 (Q6NMK7) At5g12230, partial (19%) 39 0.006
TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partia... 39 0.006
BI787495 39 0.006
AW132790 39 0.006
BU927182 39 0.006
TC217953 similar to UP|Q9FHH9 (Q9FHH9) DNA-binding protein-like,... 39 0.007
AW567731 39 0.010
BG650128 37 0.022
TC232471 similar to UP|NLFE_HUMAN (P18615) Negative elongation f... 37 0.022
TC212455 weakly similar to UP|Q7QIA8 (Q7QIA8) AgCP3984 (Fragment... 37 0.022
BU081909 37 0.022
TC230104 similar to UP|Q940U9 (Q940U9) AT5g17440/K3M16_10, parti... 37 0.028
TC214846 UP|KTI1_SOYBN (P25272) Kunitz-type trypsin inhibitor KT... 37 0.028
BQ785202 37 0.037
>BU090312
Length = 409
Score = 176 bits (446), Expect = 3e-44
Identities = 83/124 (66%), Positives = 104/124 (82%), Gaps = 1/124 (0%)
Frame = +1
Query: 463 VLPATVSYPKI-QKTELGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFEL 521
+LPA P Q++ELGA+VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDR+EL
Sbjct: 34 LLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYEL 213
Query: 522 DMLLESINATSKKVEEIIEKVNDDIIPGDIPIRIEEHLSALNLRCIERLYGDHGLDVMEV 581
DMLLES+++ +KK EE+ +N++ I + RIE+H + LNLRCIERLYGDHGLDV+++
Sbjct: 214 DMLLESVSSAAKKAEELYNSINENKISVETLNRIEDHFTVLNLRCIERLYGDHGLDVIDI 393
Query: 582 LKKN 585
L+KN
Sbjct: 394 LRKN 405
>BE191307
Length = 474
Score = 112 bits (279), Expect = 7e-25
Identities = 71/187 (37%), Positives = 97/187 (50%), Gaps = 4/187 (2%)
Frame = -2
Query: 179 DRSSAMTTGRQMHVDK----REKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREK 234
+R S RQM DK R++ + D D+S + P+ + D+ +M KEQR+RE +
Sbjct: 461 ERGSMAPMIRQMPADKQRYRRDRLPSHDRDHDMSAERPELDDDKTMMNIHKEQRKRESRE 282
Query: 235 DRREERDRRERERDDRDYDNDGNLERLPHKKKSVHRATDPGTAEPLHDADEKLDLLPNSS 294
R ++D RE D D + D NL+R P KKKSV +A
Sbjct: 281 RRMRDQDEREH---DLDNNRDLNLQRFPDKKKSVKKA----------------------- 180
Query: 295 TCEDKSSLKSLCSPVLAFLEKVKEKLKNPDDYQEFLKCLHIYSREIITRQELLALVGDLL 354
+ + S +F EKVKEKL + DDYQ FLKCLHI+S II R +L LV DLL
Sbjct: 179 --------EGMYSQAFSFCEKVKEKLSSSDDYQTFLKCLHIFSNGIIKRNDLPNLVTDLL 24
Query: 355 GKYADIM 361
GK++D+M
Sbjct: 23 GKHSDLM 3
>BE346460
Length = 329
Score = 67.4 bits (163), Expect = 2e-11
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Frame = -3
Query: 352 DLLGKYADIMEGFDDFVTQCEKNEGFLAGVMNKKSLWNEGHGQKPLKVEEKDRDRGRD-- 409
D K+ D+M+GF++ VTQC+K MN+ S +E H QK +K+E+ +RDR D
Sbjct: 288 DFPRKFPDLMKGFNECVTQCKK--------MNESSR-DEEHVQKQIKLEDWNRDRHHDGD 136
Query: 410 DGVKERDRELRERDKSTGISNKDVSIPKVSL--SKDKTS 446
D VKE + R+RDKST ++NK+VS K+SL SK K S
Sbjct: 135 DRVKETVSDCRKRDKSTVVANKNVSGRKLSLYASKKKNS 19
>TC214362 weakly similar to UP|Q7K0Y2 (Q7K0Y2) LD23217p, partial (4%)
Length = 685
Score = 42.4 bits (98), Expect = 7e-04
Identities = 35/115 (30%), Positives = 59/115 (50%), Gaps = 3/115 (2%)
Frame = +2
Query: 194 KREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRER--ERD-DR 250
+R++ + DRDL D + DR +R DKE RERE++R + D+R + ER+ R
Sbjct: 8 ERDRDRERYRDRDL-----DRDQDRDRIRRDKE---RERERERSFDYDKRSKYTERESSR 163
Query: 251 DYDNDGNLERLPHKKKSVHRATDPGTAEPLHDADEKLDLLPNSSTCEDKSSLKSL 305
DYDN G+ + +S R+ GTA+ + + + +S + + LK +
Sbjct: 164 DYDN-GSKHYRRSRSRSRSRSLQAGTAQYESRSSPQREESKRTSASSNLAQLKDM 325
Score = 30.0 bits (66), Expect = 3.4
Identities = 27/106 (25%), Positives = 38/106 (35%), Gaps = 14/106 (13%)
Frame = +2
Query: 173 RNPLLRDRSSAMTTGRQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQ----R 228
R+ + RD+ R DKR K T + RD R R+ Q +
Sbjct: 65 RDRIRRDKERERERERSFDYDKRSKYTERESSRDYDNGSKHYRRSRSRSRSRSLQAGTAQ 244
Query: 229 RREREKDRREERDR----------RERERDDRDYDNDGNLERLPHK 264
R +REE R ++ D D D N+ER+P K
Sbjct: 245 YESRSSPQREESKRTSASSNLAQLKDMYGDLGDNKGDANMERIPRK 382
>TC219663 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD protein {Homo
sapiens;} , partial (14%)
Length = 1176
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/117 (32%), Positives = 52/117 (43%), Gaps = 13/117 (11%)
Frame = +3
Query: 178 RDRSSAMTTGRQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRR 237
RDR + GR + RE++ +R DH + R R R RER++DR
Sbjct: 270 RDREISRERGRDKDRE-RERSREHSHERVRDRDHREDRHHRDRDRNRDRDRDRERDRDRG 446
Query: 238 EERDR-----RERERD-DRDYDNDGNLER-------LPHKKKSVHRATDPGTAEPLH 281
+RDR RER RD DRD + D + ER P + +S R +D E H
Sbjct: 447 RDRDRTRDRDRERGRDRDRDREYDRHRERDRDYEVGDPDRGRSRDRESDYDRVESKH 617
Score = 33.5 bits (75), Expect = 0.31
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Frame = +3
Query: 178 RDRSSAMTTGRQMHVDK-REKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKD- 235
RDR R+ D+ R++ H +RD + DP DRG R R+RE D
Sbjct: 447 RDRDRTRDRDRERGRDRDRDREYDRHRERDRDYEVGDP--DRG--------RSRDRESDY 596
Query: 236 RREERDRRERERDDRDYDNDGNLERLPHKKKSVHRATDPGTAEPLHDADEKLD 288
R E ER D D+ G + H ++ DP + + D+ D
Sbjct: 597 DRVESKHGERNHDYEPEDDRGRHNQYEHGRRHADPDHDPERYDHYNHGDDHGD 755
Score = 31.2 bits (69), Expect = 1.5
Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
Frame = +3
Query: 401 EKDRDRGRD-DGVKERDREL-RERDK 424
E+DRDRGRD D ++RDRE R+RD+
Sbjct: 426 ERDRDRGRDRDRTRDRDRERGRDRDR 503
Score = 29.6 bits (65), Expect = 4.5
Identities = 15/38 (39%), Positives = 24/38 (62%), Gaps = 3/38 (7%)
Frame = +3
Query: 398 KVEEKDRDRGRDDGVKERDREL---RERDKSTGISNKD 432
+ ++DR+RGRD ++RDRE RERD+ + + D
Sbjct: 459 RTRDRDRERGRD---RDRDREYDRHRERDRDYEVGDPD 563
>BQ611667 similar to GP|29421114|dbj ADP-glucose pyrophosphorylase large
subunit PvAGPL1 {Phaseolus vulgaris}, partial (15%)
Length = 449
Score = 39.7 bits (91), Expect = 0.004
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 194 KREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDR-RERERDDRDY 252
+RE+ +R+ + + E +R R + +R RERE++R ER+R RERER +R+
Sbjct: 18 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERER-ERER 191
Query: 253 DNDGNLERLPHKKKSV 268
+N LER K++ +
Sbjct: 192 ENKEKLERTGSKEQQM 239
>TC233073 similar to UP|Q6NMK7 (Q6NMK7) At5g12230, partial (19%)
Length = 856
Score = 39.3 bits (90), Expect = 0.006
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 211 HPDPELDRGVMRTDKEQRR-REREKDRREERDRRERERDDRDYDNDGNLERLPHKKKSVH 269
H D + D+ DKE R+ + R+KD+ +++++ +++ +R +D+ + + PH+KK H
Sbjct: 57 HKDRDKDK-----DKEHRKHKHRQKDQTKDKEKEKKKDKNRHHDSSADPSKKPHEKKRKH 221
Query: 270 RATD 273
D
Sbjct: 222 GGDD 233
>TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partial (88%)
Length = 1691
Score = 39.3 bits (90), Expect = 0.006
Identities = 42/158 (26%), Positives = 62/158 (38%), Gaps = 10/158 (6%)
Frame = +3
Query: 178 RDRSSAMTTGRQMHVDKREKTTTLHADRDLSVDHP-DPELDRGVMRTDKEQRRREREKDR 236
+D + R+ D+R + H DRD D+ D + +RG R R R+R++DR
Sbjct: 840 KDHYRGRSPTRERDRDRRHDSHR-HRDRDYDRDYDRDYDRERGRGRDRDRDRERDRDRDR 1016
Query: 237 ---REERDR------RERERDDRDYDNDGNLERLPHKKKSVHRATDPGTAEPLHDADEKL 287
REE+D RERER ++D D + +S R G A +
Sbjct: 1017YRLREEKDYGRDREGRERERREKDRDRGRRRSHSRSRSRSRDRREHDGGDYRKRHARSSV 1196
Query: 288 DLLPNSSTCEDKSSLKSLCSPVLAFLEKVKEKLKNPDD 325
+ ED K +K KEK + DD
Sbjct: 1197SPRRHGDGLEDGEPKK----------KKKKEKKEKKDD 1280
Score = 35.4 bits (80), Expect = 0.082
Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 23/108 (21%)
Frame = +3
Query: 195 REKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDR---RERERDDRD 251
R++ DRD E D G R +E+ RRE+++DR R R R RD R+
Sbjct: 972 RDRDRDRERDRDRDRYRLREEKDYGRDREGRERERREKDRDRGRRRSHSRSRSRSRDRRE 1151
Query: 252 YDN------------------DGNLERLPHKKKSVHRAT--DPGTAEP 279
+D DG + P KKK + D GT P
Sbjct: 1152 HDGGDYRKRHARSSVSPRRHGDGLEDGEPKKKKKKEKKEKKDDGTDHP 1295
Score = 35.0 bits (79), Expect = 0.11
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 210 DHPDPELDRGVMRTDKEQRR---REREKDRREERDRRERERD-DRDYDNDGNLER 260
+ P E++ D + R RER++DRR + R R+RD DRDYD D + ER
Sbjct: 801 EQPVDEIEDKAYEKDHYRGRSPTRERDRDRRHD-SHRHRDRDYDRDYDRDYDRER 962
>BI787495
Length = 429
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +2
Query: 215 ELDRGVMRTDKEQRRREREKDRREERDR-RERERDDRDYDNDGNLER-LPHKKKSVH 269
E +R R + +R RERE++R ER+R RERER +R+ + + ER +PHK +H
Sbjct: 11 ERERERERERERERERERERERERERERERERER-EREREREREREREVPHKGAVLH 178
>AW132790
Length = 402
Score = 39.3 bits (90), Expect = 0.006
Identities = 27/80 (33%), Positives = 41/80 (50%), Gaps = 7/80 (8%)
Frame = +1
Query: 209 VDHPDPELDRGVMRTDKEQRRREREKDRREERDR-RERERD-DRDYDNDGNLER-----L 261
+ H D + +R R + R R R++DR +RDR R R+RD DR+YD +R
Sbjct: 130 IHHRDRDRNRDRDRDRERDRDRGRDRDRTRDRDRERGRDRDRDREYDRHRERDRDYEVGD 309
Query: 262 PHKKKSVHRATDPGTAEPLH 281
P + +S+ R +D E H
Sbjct: 310 PDRGRSLDRESDYDLVESKH 369
Score = 29.6 bits (65), Expect = 4.5
Identities = 15/38 (39%), Positives = 24/38 (62%), Gaps = 3/38 (7%)
Frame = +1
Query: 398 KVEEKDRDRGRDDGVKERDREL---RERDKSTGISNKD 432
+ ++DR+RGRD ++RDRE RERD+ + + D
Sbjct: 211 RTRDRDRERGRD---RDRDREYDRHRERDRDYEVGDPD 315
>BU927182
Length = 447
Score = 39.3 bits (90), Expect = 0.006
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Frame = +3
Query: 188 RQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRRERE----KDRRE----- 238
R+ V+K + ++D + E DR + E+ RRE+E KDRRE
Sbjct: 132 REKEVEKERREREKEVEKDRREREKEVEKDRREREKEVEKDRREKEKEVEKDRREKEKEV 311
Query: 239 ERDRRERE----RDDRDYDNDGNLER 260
E+DRRERE +D + +ND E+
Sbjct: 312 EKDRREREKEVVKDRKKIENDKEREQ 389
Score = 35.4 bits (80), Expect = 0.082
Identities = 31/97 (31%), Positives = 46/97 (46%), Gaps = 18/97 (18%)
Frame = +3
Query: 188 RQMHVDKREKTTTLHADRDLSVDHPDP-----ELDRGVMRTDKEQRRRER----EKDRRE 238
RQM + +R K ++ +H E DR + E+ RRER EKDRRE
Sbjct: 21 RQM-ISERRKKLQKERKKEFEKEHEGERVRVREKDRREREKEVEKERREREKEVEKDRRE 197
Query: 239 -----ERDRRER----ERDDRDYDNDGNLERLPHKKK 266
E+DRRER E+D R+ + + +R +K+
Sbjct: 198 REKEVEKDRREREKEVEKDRREKEKEVEKDRREKEKE 308
Score = 32.7 bits (73), Expect = 0.53
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3
Query: 188 RQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRRERE----KDRREERDRR 243
R+ V+K + ++D + E DR + E+ RRERE KDR++ + +
Sbjct: 198 REKEVEKDRREREKEVEKDRREKEKEVEKDRREKEKEVEKDRREREKEVVKDRKKIENDK 377
Query: 244 ERERDDRD 251
ERE+ D
Sbjct: 378 EREQQHGD 401
>TC217953 similar to UP|Q9FHH9 (Q9FHH9) DNA-binding protein-like, partial
(6%)
Length = 1115
Score = 38.9 bits (89), Expect = 0.007
Identities = 20/66 (30%), Positives = 33/66 (49%)
Frame = +1
Query: 203 ADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRERERDDRDYDNDGNLERLP 262
AD + ++ P P + R K RR+RE DRR ERD + R+ + G++ +
Sbjct: 643 ADFSMGMNAPPPVMSREEFEARKADMRRKRENDRRPERDFSKDRDFGREVSSVGDVSSMK 822
Query: 263 HKKKSV 268
K +S+
Sbjct: 823 SKTRSI 840
Score = 30.4 bits (67), Expect = 2.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 234 KDRREERDRRERERDDRDYDNDGNLERLPHKKKSVHRATDPGTAEPLHDA 283
K + E RERE DRDY+++ + R H+ +S R + A+P +A
Sbjct: 946 KRKLEHHSDREREDRDRDYEHERHHRR--HRSESSSRRSSEPVAKPSSNA 1089
>AW567731
Length = 303
Score = 38.5 bits (88), Expect = 0.010
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 215 ELDRGVMRTDKEQRRREREKDRREERDRRERERD-DRDYDNDGNLERLPHKKKSVHRATD 273
E +R R ++E+ R ERE+ RR R R ERER+ +RD+D + R KK++ D
Sbjct: 6 EKERERERREREREREERERSRR-SRSRSERERERERDFDTRDS-RRFRDKKEAAEPEAD 179
Query: 274 P 274
P
Sbjct: 180 P 182
>BG650128
Length = 349
Score = 37.4 bits (85), Expect = 0.022
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 196 EKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRERERDDR 250
E+ +R+ D + E +R R + +R RERE++R ER+RRERE R
Sbjct: 1 ERERERERERERERD*RERERERERERERERERERERERERERERERREREN*SR 165
Score = 37.0 bits (84), Expect = 0.028
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 228 RRREREKDRREERDRRERERDDRDYDNDGNLERLPHKKKSVHRATDPGTAE 278
R RERE++R ER+ RERER +R+ + + ER +++ R + G E
Sbjct: 2 RERERERERERERETRERER-ERERERERERERERERERERERERERGERE 151
Score = 35.8 bits (81), Expect = 0.063
Identities = 17/49 (34%), Positives = 29/49 (58%)
Frame = +2
Query: 204 DRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRERERDDRDY 252
+R+ + + E +R R + +R RERE++R ER+R ERER ++
Sbjct: 23 ERERERETRERERERERERERERERERERERERERERERGERERTSLEF 169
Score = 33.9 bits (76), Expect = 0.24
Identities = 17/45 (37%), Positives = 28/45 (61%), Gaps = 1/45 (2%)
Frame = +3
Query: 227 QRRREREKDRREERDRRERERD-DRDYDNDGNLERLPHKKKSVHR 270
+R RERE++R ER RERER+ +R+ + + ER +++ R
Sbjct: 3 ERERERERERERERLERERERERERERERERERERERERERERER 137
Score = 33.5 bits (75), Expect = 0.31
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 222 RTDKEQRRREREKDRREERDRRERERD-DRDYDNDGNLERLPHKKKSVHRAT 272
R + +R RERE++ RE RERER+ +R+ + + ER +++ T
Sbjct: 2 RERERERERERERETRERERERERERERERERERERERERERERERGERERT 157
Score = 33.5 bits (75), Expect = 0.31
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 195 REKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRER 245
RE+ +R+ + E +R R + +R RERE++R ER RER
Sbjct: 2 RERERERERERERETRERERERERERERERERERERERERERERERGERER 154
>TC232471 similar to UP|NLFE_HUMAN (P18615) Negative elongation factor E
(NELF-E) (RD protein), partial (11%)
Length = 480
Score = 37.4 bits (85), Expect = 0.022
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 195 REKTTTLHADRDLSVDHPDPELDRGVMRT-DKEQRRREREKDRREERDRRERER 247
RE+ H DRD D D E +R R D+E RR RE++R EE RER R
Sbjct: 309 RERDRDHHRDRDRDRDR-DRERERERARDRDREAERRNREREREEESRARERAR 467
Score = 36.2 bits (82), Expect = 0.048
Identities = 22/59 (37%), Positives = 32/59 (53%), Gaps = 1/59 (1%)
Frame = +3
Query: 204 DRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRERERDDRDYDND-GNLERL 261
DR+ DH + DR R + +R R R++DR ER RERER++ + LE+L
Sbjct: 306 DRERDRDH-HRDRDRDRDRDRERERERARDRDREAERRNREREREEESRARERARLEKL 479
Score = 32.7 bits (73), Expect = 0.53
Identities = 25/88 (28%), Positives = 38/88 (42%)
Frame = +3
Query: 193 DKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRERERDDRDY 252
D++ + L + S P + DR R R R+R++DR E RERER RD
Sbjct: 228 DQKRRQEQLLSRNHSSDPKPSSDRDRDRERDRDHHRDRDRDRDRDRE---RERER-ARDR 395
Query: 253 DNDGNLERLPHKKKSVHRATDPGTAEPL 280
D + +++ RA + E L
Sbjct: 396 DREAERRNREREREEESRARERARLEKL 479
Score = 28.9 bits (63), Expect = 7.7
Identities = 18/76 (23%), Positives = 30/76 (38%)
Frame = +3
Query: 185 TTGRQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRE 244
+T + + + K ++ R V ++ + R + ++DR ERDR
Sbjct: 150 STSKPVFLTKAQREQLALQRRQEEVADQKRRQEQLLSRNHSSDPKPSSDRDRDRERDRDH 329
Query: 245 RERDDRDYDNDGNLER 260
DRD D D ER
Sbjct: 330 HRDRDRDRDRDRERER 377
>TC212455 weakly similar to UP|Q7QIA8 (Q7QIA8) AgCP3984 (Fragment), partial
(11%)
Length = 944
Score = 37.4 bits (85), Expect = 0.022
Identities = 26/90 (28%), Positives = 42/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 179 DRSSAMTTGRQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRRE 238
DR T R+++ DRDL + E RG + +R +ERE+ R
Sbjct: 208 DRREYSTRYHNREARDRDRSRDRDVDRDLHREKKQEETSRGKEIEWEHKRGKERERSR-- 381
Query: 239 ERDRRERERD-DRDYDNDGNLERLPHKKKS 267
ER RR+ E+D R+ + DG+ + + +S
Sbjct: 382 ERYRRDAEKDRSREREEDGDRRQEKERDRS 471
Score = 36.6 bits (83), Expect = 0.037
Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 31/138 (22%)
Frame = +1
Query: 178 RDRSSAMTTGRQMHVDKREKTTTLHAD-------------------RDLSVDHPDPELDR 218
RDRS R +H +K+++ T+ + RD D +
Sbjct: 256 RDRSRDRDVDRDLHREKKQEETSRGKEIEWEHKRGKERERSRERYRRDAEKDRSREREED 435
Query: 219 GVMRTDKE---------QRRREREKDRREERDRR---ERERDDRDYDNDGNLERLPHKKK 266
G R +KE +R R REK+R RDR +R+RD + +D N ER +
Sbjct: 436 GDRRQEKERDRSWDTVFERDRRREKERDRSRDRTIGGKRDRDPENERDDKNRERRDDRYG 615
Query: 267 SVHRATDPGTAEPLHDAD 284
R T G L D
Sbjct: 616 HKDRDTANGKDRHLRHED 669
>BU081909
Length = 183
Score = 37.4 bits (85), Expect = 0.022
Identities = 22/57 (38%), Positives = 35/57 (60%), Gaps = 6/57 (10%)
Frame = +2
Query: 222 RTDKEQRRREREKDRREERDR-RERERDDRDYDNDGNLER-----LPHKKKSVHRAT 272
R + +R RERE++R ER+R RERER +R+ + +GN R + H ++S + T
Sbjct: 8 RERERERERERERERERERERERERER-EREREKNGNHHRRHPNYIDHSRRSCAQTT 175
>TC230104 similar to UP|Q940U9 (Q940U9) AT5g17440/K3M16_10, partial (24%)
Length = 763
Score = 37.0 bits (84), Expect = 0.028
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 178 RDRSSAMTTGRQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRT---DKEQRRREREK 234
RDR + R D+R + H DRD D + DR RT D RRR R +
Sbjct: 276 RDRELGDSRERGRDHDRRSRDHDRHYDRDRGYDR---DRDRDSDRTRSYDSRSRRRSRSR 446
Query: 235 DRREERDRRERERDDR 250
R RD R DR
Sbjct: 447 SRERSRDYDRHRRHDR 494
Score = 35.0 bits (79), Expect = 0.11
Identities = 35/114 (30%), Positives = 45/114 (38%), Gaps = 13/114 (11%)
Frame = +3
Query: 160 DTSGAAAAHFASARNPLLRDRSSAMTTGRQMHVDKREKTTTLHADRDLSVDHPDPELDRG 219
D GA + + S R L D M + REK L +R+ S LD
Sbjct: 72 DICGAXXSVYDSDRR--LADHFGGKLXXGYMQI--REKLAELQEERNKS--RKTDRLD-- 227
Query: 220 VMRTDKEQRRREREKDRREERDR-----RERERD--------DRDYDNDGNLER 260
D+ + R R++DR RDR RER RD DR YD D +R
Sbjct: 228 ----DRRSKERSRDRDRESSRDRELGDSRERGRDHDRRSRDHDRHYDRDRGYDR 377
Score = 32.3 bits (72), Expect = 0.69
Identities = 24/69 (34%), Positives = 35/69 (49%), Gaps = 7/69 (10%)
Frame = +3
Query: 193 DKREKTTTLHADRDLSVDHP-DPELDRGVMRTDKEQRRREREKDRREERDR---RERERD 248
D+R K + DR+ S D +RG ++ RR R+ DR +RDR R+R+RD
Sbjct: 228 DRRSKERSRDRDRESSRDRELGDSRERG-----RDHDRRSRDHDRHYDRDRGYDRDRDRD 392
Query: 249 D---RDYDN 254
R YD+
Sbjct: 393 SDRTRSYDS 419
>TC214846 UP|KTI1_SOYBN (P25272) Kunitz-type trypsin inhibitor KTI1 precursor,
complete
Length = 1027
Score = 37.0 bits (84), Expect = 0.028
Identities = 17/31 (54%), Positives = 24/31 (76%), Gaps = 1/31 (3%)
Frame = -2
Query: 222 RTDKEQRRREREKDRREERDR-RERERDDRD 251
R + +R RERE++R ER+R RERER++RD
Sbjct: 1005 REREREREREREREREREREREREREREERD 913
Score = 33.5 bits (75), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 215 ELDRGVMRTDKEQRRREREKDRREERDRRERERD 248
E +R R + +R RERE++R ER+R ERD
Sbjct: 1014 EREREREREREREREREREREREREREREREERD 913
>BQ785202
Length = 423
Score = 36.6 bits (83), Expect = 0.037
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 222 RTDKEQRRREREKDRREERDR-RERERDDRDYDNDGNL 258
R + +R RERE++R ER+R RERER +R Y+N+ N+
Sbjct: 2 RERERERERERERERERERERERERER-ERAYNNNKNI 112
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.137 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,824,961
Number of Sequences: 63676
Number of extensions: 314001
Number of successful extensions: 3059
Number of sequences better than 10.0: 185
Number of HSP's better than 10.0 without gapping: 2392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2792
length of query: 670
length of database: 12,639,632
effective HSP length: 104
effective length of query: 566
effective length of database: 6,017,328
effective search space: 3405807648
effective search space used: 3405807648
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146588.6