TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146585.11 + phase: 0 
         (308 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC235032 weakly similar to UP|Q7XDX0 (Q7XDX0) Contains similarit...    82  4e-16
TC224534 similar to UP|Q6USA0 (Q6USA0) Transposase (Fragment), p...    42  5e-04
TC234723 similar to UP|Q9FHY5 (Q9FHY5) Emb|CAB72466.1 (At5g41980...    40  0.001
TC212187 weakly similar to UP|Q6USA0 (Q6USA0) Transposase (Fragm...    40  0.001
TC210984                                                               32  0.28
TC204588 similar to UP|Q7X9G7 (Q7X9G7) Alpha-L-arabinofuranosida...    30  1.8
TC219463 homologue to UP|Q94KL5 (Q94KL5) BEL1-like homeobox 4, p...    28  5.2
TC229778 similar to UP|Q8H3D7 (Q8H3D7) Leaf senescence related p...    28  6.9
TC232154 weakly similar to GB|AAF86996.1|9295690|AC005292 F26F24...    28  6.9

>TC235032 weakly similar to UP|Q7XDX0 (Q7XDX0) Contains similarity to
           ribosomal protein, partial (24%)
          Length = 689

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
 Frame = +3

Query: 50  LQRILHVSEMRGFPGMIGSIDCMHWEWKNCPKAWEGQFTRGDKGTTTVILEAVASHDLWI 109
           +Q ++ + E+RGF  M+GSID +HW+ K C  AW+GQ+  GD G  T++L+ V S  L I
Sbjct: 12  IQYLMQICEIRGFQSMLGSIDYLHWK*KTCLVAWKGQYCHGD-GPPTIMLKVVVSQYLRI 188

Query: 110 WHAFFGCPGTLNDINVLDRSPVFDDVEQGKTPRVNYFVNQRP-----YNMTYYLA--DGI 162
            HA+ G  G+ N+INVL+ S V      G++P         P      +  +YL+  D  
Sbjct: 189 *HAYLGVEGSNNNINVLNESCV*RRY-GGRSPYCTICS**NPI*HGVLSDIWYLSRLDDA 365

Query: 163 YPSYPTFVKSIRLPQSEPDKLFAKHQESCRKDIERAFGVLQARFKIIREPARLWDIADLG 222
              +P  ++S +       K+      S +K     +      F ++R     W    L 
Sbjct: 366 CEDHPKAIRS*K-------KIVYSISRSNKKGSHLKY------FNLVRN--YTWSCVWLE 500

Query: 223 -------IIMRSCIILHNMIVEDERDTY 243
                    M  CIILHNMIV+DE  TY
Sbjct: 501 HEHISSIYYMYVCIILHNMIVKDEPHTY 584


>TC224534 similar to UP|Q6USA0 (Q6USA0) Transposase (Fragment), partial (50%)
          Length = 968

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
 Frame = +1

Query: 153 NMTYYLADGIYPSYPTFVKSI------------RLPQSEPDKLFAKHQESCRKDIERAFG 200
           N  Y+L D  Y + P F+                 PQ+  + LF     S +  IER+FG
Sbjct: 472 NGKYFLVDAGYTNGPGFLTPY*RTRYHRNEWIGNTPQNYKE-LFNLRHASAKNVIERSFG 648

Query: 201 VLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDER 240
           VL+ R+ I+R P+  +DI     I+ +C +L N I ++++
Sbjct: 649 VLKKRWSILRTPS-FFDIKTQIRIINTCFMLRNFIRDEQQ 765


>TC234723 similar to UP|Q9FHY5 (Q9FHY5) Emb|CAB72466.1 (At5g41980), partial
           (24%)
          Length = 837

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 23/171 (13%)
 Frame = +2

Query: 156 YYLADGIYPSYPTFVK-------------SIRLPQSEPDKLFAKHQESCRKDIERAFGVL 202
           YY+ D  Y + P FV              S   PQ +  +LF +     R  I+R FG+L
Sbjct: 143 YYIVDSKYQNVPGFVAPYSSTPYYSKEFLSDYHPQ-DASELFNQRHSLLRHVIDRTFGIL 319

Query: 203 QARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDTYAQRWTDFEQSEGSGSSTQQ 262
           +ARF I+           + +++ +C  LHN I  ++ D +  +   +E+       +Q 
Sbjct: 320 KARFPILMSAPSYPLQTQVKLVVAAC-ALHNYIRREKPDDWLFKM--YEEGSFPMEESQP 490

Query: 263 PYSTEVLPTFANHVRARSELRDPNVH----------HELQADLVKHIWTKF 303
           P   EV P      + +     P+VH           +L+  +   +W  F
Sbjct: 491 PLEMEVPPKMDVETQTQ-----PSVHTFDSEEIALASQLRDSIATEMWNDF 628


>TC212187 weakly similar to UP|Q6USA0 (Q6USA0) Transposase (Fragment),
           partial (45%)
          Length = 973

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 36/130 (27%), Positives = 60/130 (45%), Gaps = 23/130 (17%)
 Frame = +1

Query: 154 MTYYLADGIYPSYPTFVKSIR-----LPQSEPD-------KLFAKHQESCRKDIERAFGV 201
           + +YL D  YP++  F+ S       LPQ           ++F  +  S +  IERAFG+
Sbjct: 508 VNFYLVDSCYPTFMGFLGSYNKTRYHLPQFRIGPRIRGRVEVFNYYHSSLQSTIERAFGL 687

Query: 202 LQARFKIIREPARLWDIADLGIIMRSCIILHNMIVE-----------DERDTYAQRWTDF 250
            +AR+KI+   +  + +     I+ +C+ +HN I             DE + Y    TD 
Sbjct: 688 CKARWKILGNMSP-FALKTQNQIIVACMTIHNFIQRNDKSDGEFDSLDEDNEYID--TDK 858

Query: 251 EQSEGSGSST 260
           ++SE   S+T
Sbjct: 859 DESEVGPSTT 888


>TC210984 
          Length = 1085

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +3

Query: 182 KLFAKHQESCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDER- 240
           +LF     S R  IER FG+ ++RF I +            +++ +C  LHN + ++ R 
Sbjct: 426 ELFNLRHASLRNVIERIFGIFKSRFTIFKSAPPFLFKTQAELVL-ACAALHNFLRKECRS 602

Query: 241 DTYAQRWTDFEQSEGSGSSTQQP 263
           D +    TD    E S SS+  P
Sbjct: 603 DEFPVEPTD----ESSSSSSVLP 659


>TC204588 similar to UP|Q7X9G7 (Q7X9G7) Alpha-L-arabinofuranosidase, partial
            (84%)
          Length = 2003

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/79 (27%), Positives = 32/79 (39%)
 Frame = -3

Query: 93   GTTTVILEAVASHDLWIWHAFFGCPGTLNDINVLDRSPVFDDVEQGKTPRVNYFVNQRPY 152
            GT T +        LWI   FFGC    + I   D S VF D +       N F +    
Sbjct: 1752 GTVTFMSFPTF*SRLWIGTTFFGCEKEFSSITFADVSTVFVDPD-----NCNEFGSSPSR 1588

Query: 153  NMTYYLADGIYPSYPTFVK 171
             +  + A  + P + TF++
Sbjct: 1587 EILRFTA--VVPKFTTFIR 1537


>TC219463 homologue to UP|Q94KL5 (Q94KL5) BEL1-like homeobox 4, partial (21%)
          Length = 1111

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/54 (31%), Positives = 26/54 (47%)
 Frame = +3

Query: 190 SCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDTY 243
           +CR+ +    G L+A FK+ + P                 ILH+MI++D  DTY
Sbjct: 699 TCRRKLRSPLGTLEA-FKLNQFP-----------------ILHHMIIKDNNDTY 806


>TC229778 similar to UP|Q8H3D7 (Q8H3D7) Leaf senescence related protein-like,
           partial (8%)
          Length = 494

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/64 (31%), Positives = 25/64 (38%)
 Frame = +3

Query: 20  ITALECLRRFCKGIIRLYEQVYLRAPTQDDLQRILHVSEMRGFPGMIGSIDCMHWEWKNC 79
           IT +  LRR        +  VY R  +QD+ Q+          PG   S DC HW     
Sbjct: 144 ITTMTALRRDG------HPSVYRRVISQDEKQK----------PGKGHSSDCSHWCLPGV 275

Query: 80  PKAW 83
           P  W
Sbjct: 276 PDIW 287


>TC232154 weakly similar to GB|AAF86996.1|9295690|AC005292 F26F24.7
           {Arabidopsis thaliana;} , partial (40%)
          Length = 576

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 74  WEWKNCPKAWEGQFTRGDKGTTTVILEAVASHDLWIWHAF 113
           W+W+ C  AW    +    G+  ++L  +     W+W AF
Sbjct: 150 WDWEWCACAWPCYASLWSHGSALLVLVVLP----WLWKAF 43


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.324    0.139    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,045,822
Number of Sequences: 63676
Number of extensions: 211582
Number of successful extensions: 1036
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of query: 308
length of database: 12,639,632
effective HSP length: 97
effective length of query: 211
effective length of database: 6,463,060
effective search space: 1363705660
effective search space used: 1363705660
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)