BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146573.2 - phase: 0
(226 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC222705 similar to UP|Q6UK18 (Q6UK18) CaCBF1B, partial (54%) 169 1e-42
AW458169 homologue to GP|23495462|dbj dehydration responsive ele... 154 3e-38
BI967869 similar to GP|12003384|gb Avr9/Cf-9 rapidly elicited pr... 144 2e-35
TC232548 similar to UP|Q6R4U4 (Q6R4U4) DREB1, partial (43%) 138 2e-33
TC218621 similar to UP|Q6UK18 (Q6UK18) CaCBF1B, partial (45%) 138 2e-33
TC217467 similar to UP|Q949B2 (Q949B2) AP2 domain-containing pro... 111 2e-25
TC223358 similar to UP|Q8H9A2 (Q8H9A2) Dehydratiion responsive e... 108 2e-24
TC209130 similar to PIR|T48518|T48518 transcription factor like ... 108 3e-24
AW184868 104 3e-23
TC211213 similar to PIR|T48518|T48518 transcription factor like ... 102 1e-22
TC208898 similar to PIR|T48518|T48518 transcription factor like ... 100 5e-22
TC233698 similar to PIR|T48518|T48518 transcription factor like ... 100 7e-22
TC216740 similar to UP|O60585 (O60585) Ser/Arg-related nuclear m... 97 5e-21
TC216741 similar to UP|Q75UJ6 (Q75UJ6) DREB-like protein, partia... 97 8e-21
TC218622 similar to UP|Q9FQZ8 (Q9FQZ8) Avr9/Cf-9 rapidly elicite... 89 2e-18
TC220733 similar to GB|AAS68114.1|45592920|BT011790 At1g71450 {A... 88 4e-18
TC222567 weakly similar to UP|Q75UJ6 (Q75UJ6) DREB-like protein,... 81 4e-16
BE474139 76 1e-14
TC207659 74 4e-14
TC213190 homologue to UP|Q7Y0Y9 (Q7Y0Y9) Dehydration responsive ... 74 5e-14
>TC222705 similar to UP|Q6UK18 (Q6UK18) CaCBF1B, partial (54%)
Length = 745
Score = 169 bits (427), Expect = 1e-42
Identities = 100/217 (46%), Positives = 137/217 (63%), Gaps = 2/217 (0%)
Frame = +3
Query: 12 SDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINV 71
S SS S + LA++ PKKRAGR+ F+ETRHPVYRGVRRR++ KWVCE+R PN
Sbjct: 147 SGGSSRPALSDEDFFLAASNPKKRAGRKKFRETRHPVYRGVRRRDSGKWVCEVREPN--- 317
Query: 72 NKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRA 131
KSRIWLGT+PT EMAARAHDVAA+ L+G+SACLNFADSA RL +P + +A +I++A
Sbjct: 318 ---KKSRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASRLPVPATAEARDIQKA 488
Query: 132 AMEAAKMFAIEENHNQRSDRDAVDMNMENSKKNVLEVQVPVLSSEFEDMHHNLLLSIANE 191
A EAA+ F ++ + ++R A ++ E VP E + + +L+
Sbjct: 489 AAEAAEAFRPGKDDDAVAERVAATATEREEEQE--EGMVP------EYLRNMVLM----- 629
Query: 192 PLRSNPPSPTNYYGSN-YDDMEI-FDTQIVSLWNFSI 226
SPT+ +GS+ Y ++ FD VSLW++SI
Sbjct: 630 -------SPTHCFGSDEYGSADVEFDDAEVSLWSYSI 719
>AW458169 homologue to GP|23495462|dbj dehydration responsive element binding
protein 1 like protein {Prunus avium}, partial (59%)
Length = 390
Score = 154 bits (389), Expect = 3e-38
Identities = 85/119 (71%), Positives = 90/119 (75%), Gaps = 14/119 (11%)
Frame = +3
Query: 1 MNIFLSS----------FGDYSDSSSSSETSSS----EVILASARPKKRAGRRVFKETRH 46
MNIF S F D +++S SSET S+ EVILASARPKKRAGRRVFKETRH
Sbjct: 51 MNIFKSPLDHDLNCGGIFHDSAEASYSSETRSTPSDEEVILASARPKKRAGRRVFKETRH 230
Query: 47 PVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKS 105
PVYRGVRRRN NKWVCEMRVP NN SRIWLGTYPTPEMAARAHDVAAL L+GKS
Sbjct: 231 PVYRGVRRRNKNKWVCEMRVP------NNNSRIWLGTYPTPEMAARAHDVAALALRGKS 389
>BI967869 similar to GP|12003384|gb Avr9/Cf-9 rapidly elicited protein 111B
{Nicotiana tabacum}, partial (47%)
Length = 743
Score = 144 bits (364), Expect = 2e-35
Identities = 83/202 (41%), Positives = 115/202 (56%), Gaps = 7/202 (3%)
Frame = -3
Query: 32 PKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAA 91
PK + F+ETRHPVYRGVRRRN +KWV E+R P K+RIWLGT+PTPE A
Sbjct: 741 PKXXXXXKKFRETRHPVYRGVRRRNTDKWVSEVREPX------KKTRIWLGTFPTPEXXA 580
Query: 92 RAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRAAMEAAKMFAIEE-----NHN 146
RAHDV A+ L+G+ ACLNFADS WRL +P + +A +I++AA EAA+ F + N
Sbjct: 579 RAHDVXAMALRGRYACLNFADSTWRLPIPATANAKDIQKAAAEAAEAFRPSQTLENTNTK 400
Query: 147 QRSDRDAVDMNMENSKKNVLEVQVPVLSSEFEDMHHNLLLSIANEPLRSNPPSPTNYYGS 206
Q + + K+ + + + ++ N++L SPT+ G
Sbjct: 399 QECVKVVTTTTITEQKRGMFYTEEEEQVLDMPELLRNMVLM-----------SPTHCIGY 253
Query: 207 NYDDMEIFDTQ--IVSLWNFSI 226
Y+D ++ D Q VSLW+FSI
Sbjct: 252 EYEDADL-DAQDAEVSLWSFSI 190
>TC232548 similar to UP|Q6R4U4 (Q6R4U4) DREB1, partial (43%)
Length = 800
Score = 138 bits (348), Expect = 2e-33
Identities = 95/203 (46%), Positives = 114/203 (55%), Gaps = 23/203 (11%)
Frame = -2
Query: 47 PVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSA 106
PVYRGVRRR K CE+RVPN + +RIWLGTYP PE ARAHDVAAL L+GKSA
Sbjct: 793 PVYRGVRRRXXXKXXCEVRVPN-----DKSTRIWLGTYPVPEXXARAHDVAALALRGKSA 629
Query: 107 CLNFADSAWRLTLPESNDAVEIRRAAMEAAKMFAIEENHNQRSD----RDAVDMNMENSK 162
CLNFADSAWRL LP S +A EIRR A AA A E++ ++ DAV + E S+
Sbjct: 628 CLNFADSAWRLPLPASTNAKEIRRVAAAAAVAIAAEDSCGEQLQNSIVNDAVADDCEVSR 449
Query: 163 KNV-----------------LEVQVPVLSSEFEDMHHNLLLSIANEPLRSNPPSPTNYYG 205
+V L+ + FEDM L S+A+EPLR SPT
Sbjct: 448 SDVSFDEDSNSNKGLRVFCDLDEITMADAPVFEDM-REWLQSMADEPLR----SPTFVTY 284
Query: 206 SNYDDMEIF--DTQIVSLWNFSI 226
N D+ F D VSLW+F+I
Sbjct: 283 VNVRDVWNFVEDDAEVSLWSFTI 215
>TC218621 similar to UP|Q6UK18 (Q6UK18) CaCBF1B, partial (45%)
Length = 786
Score = 138 bits (348), Expect = 2e-33
Identities = 85/191 (44%), Positives = 111/191 (57%), Gaps = 5/191 (2%)
Frame = +3
Query: 41 FKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALT 100
F+ET PVYRGVRRRN++KWVCE+R P K+RIWLG +P PEM ARAHDV A+
Sbjct: 21 FRETXXPVYRGVRRRNSDKWVCEVREPX------KKTRIWLGIFPMPEMXARAHDVXAMA 182
Query: 101 LKGKSACLNFADSAWRLTLPESNDAVEIRRAAMEAAKMF---AIEENHNQRSDRDAVDMN 157
L+G+ ACLNFADSAWRL +P +A +I++AA+EAA F I +N N R +
Sbjct: 183 LRGRYACLNFADSAWRLPVPAMAEAKDIQKAAVEAA*AFRPDQILKNANTRQE------C 344
Query: 158 MENSKKNVLEVQVPVLSSEFEDMHHNLLLSIANEPLRSNPPSPTNYYGSNYDDMEIFDTQ 217
+E V+E + F +L + SPT+ G Y+D ++ D Q
Sbjct: 345 VEAVAVAVVETTMATAQGVFYMEEEEQVLDMPELLRNMVLMSPTHCLGYEYEDADL-DAQ 521
Query: 218 --IVSLWNFSI 226
VSLWNFSI
Sbjct: 522 DAEVSLWNFSI 554
>TC217467 similar to UP|Q949B2 (Q949B2) AP2 domain-containing protein Rap211,
partial (48%)
Length = 1166
Score = 111 bits (278), Expect = 2e-25
Identities = 62/136 (45%), Positives = 82/136 (59%)
Frame = +2
Query: 15 SSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKN 74
S+SS +S E + + KK+ E +HP YRGVR R KWV E+R P
Sbjct: 143 STSSSSSIEEATNTTTKEKKKKRAISNIEGKHPTYRGVRMRQWGKWVSEIREPR------ 304
Query: 75 NKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRAAME 134
KSRIWLGT+PTP+MAARAHDVAALT+KG SA LNF + A +L P S +I+ AA +
Sbjct: 305 KKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAKLPRPASTSPKDIQAAAAK 484
Query: 135 AAKMFAIEENHNQRSD 150
A+ + ++H S+
Sbjct: 485 ASALDFGHQSHEAESE 532
>TC223358 similar to UP|Q8H9A2 (Q8H9A2) Dehydratiion responsive element
binding protein 1 like protein, partial (16%)
Length = 542
Score = 108 bits (271), Expect = 2e-24
Identities = 64/125 (51%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
Frame = +1
Query: 104 KSACLNFADSAWRLTLPESNDAVEIRRAAMEAAKMFAIEENHNQRSDRDAVDMNMENS-- 161
KSACLNFADS WRLT+P + +A EIRRAA EAA+ FA+ +D D V+++ + S
Sbjct: 16 KSACLNFADSRWRLTVPATTNAEEIRRAAGEAAEAFAV-------ADGDDVNIDQQQSVM 174
Query: 162 KKNVLEVQVPVLSSEFEDMHHNLLLSIANEPLRSNPPSPTNYYGSNYDDMEIFDTQIVSL 221
N EVQ P+ E +D+ H+LLLSIANEPL S PP + G ++D++IFD +SL
Sbjct: 175 ATNDDEVQEPLQQEEVQDL-HDLLLSIANEPLMSPPPCARD--GRGWNDVDIFDDDEISL 345
Query: 222 WNFSI 226
WNFSI
Sbjct: 346 WNFSI 360
>TC209130 similar to PIR|T48518|T48518 transcription factor like protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(45%)
Length = 1220
Score = 108 bits (269), Expect = 3e-24
Identities = 66/150 (44%), Positives = 87/150 (58%)
Frame = +3
Query: 12 SDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINV 71
S S+SS + SSSE L A +KR + ++HPVYRGVR R KWV E+R P
Sbjct: 240 SSSASSRKHSSSEAHLP-APDQKRPKQARDSSSKHPVYRGVRMRAWGKWVSEIREPR--- 407
Query: 72 NKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRA 131
K+RIWLGT+ T EMAARAHDVAAL +KG SA LNF + A L P+SN +++ A
Sbjct: 408 ---KKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNFPELAASLPRPDSNSPRDVQAA 578
Query: 132 AMEAAKMFAIEENHNQRSDRDAVDMNMENS 161
A +AA M + S + +++ S
Sbjct: 579 AAKAAAMEVNDVPTTPSSSSSSASLSLSQS 668
>AW184868
Length = 449
Score = 104 bits (260), Expect = 3e-23
Identities = 59/117 (50%), Positives = 71/117 (60%)
Frame = +1
Query: 28 ASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTP 87
ASA R G TRHP+YRGVR+R KWV E+R P K+RIWLG++P P
Sbjct: 31 ASATDNPRGG------TRHPMYRGVRKRRWGKWVSEIREPR------KKNRIWLGSFPVP 174
Query: 88 EMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRAAMEAAKMFAIEEN 144
EMAARA+DVAA LKG+ A LNF D L LP S A +I+ AA +AA+M N
Sbjct: 175 EMAARAYDVAAYCLKGRKAQLNFPDDVDSLPLPSSRTARDIQTAAAQAARMMKASGN 345
>TC211213 similar to PIR|T48518|T48518 transcription factor like protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(45%)
Length = 789
Score = 102 bits (254), Expect = 1e-22
Identities = 63/130 (48%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Frame = +2
Query: 14 SSSSSETSSSEVILASARPKKRA---GRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNIN 70
S SSS + S +S+ KKRA +H VYRGVR R KWV E+R P
Sbjct: 167 SPSSSSSLSPSPSPSSSSSKKRARDNNNSRNNSNKHSVYRGVRMRTWGKWVSEIREPR-- 340
Query: 71 VNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRR 130
K+RIWLGT+ T EMAARAHDVAALT+KG SA LNF + A L P SN +++
Sbjct: 341 ----KKNRIWLGTFATAEMAARAHDVAALTIKGSSAILNFPELAASLPRPASNSPRDVQA 508
Query: 131 AAMEAAKMFA 140
AA +AA M A
Sbjct: 509 AAAKAASMEA 538
>TC208898 similar to PIR|T48518|T48518 transcription factor like protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(39%)
Length = 931
Score = 100 bits (249), Expect = 5e-22
Identities = 55/104 (52%), Positives = 66/104 (62%)
Frame = +3
Query: 35 RAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAH 94
R G +HP+YRGVR RN KWV E+R P KSRIWLGT+PTPEMAARAH
Sbjct: 300 RGGGGGDSSNKHPLYRGVRMRNWGKWVSEIREPR------KKSRIWLGTFPTPEMAARAH 461
Query: 95 DVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRAAMEAAKM 138
DVAAL++KG +A LNF A L P S +++ AA +AA M
Sbjct: 462 DVAALSIKGSAAILNFPHFANSLPRPASLAPRDVQAAAAKAAHM 593
>TC233698 similar to PIR|T48518|T48518 transcription factor like protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(33%)
Length = 437
Score = 100 bits (248), Expect = 7e-22
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 3/106 (2%)
Frame = +3
Query: 12 SDSSSSSETSSSEVILASARPKKRAGRRVFKE---TRHPVYRGVRRRNNNKWVCEMRVPN 68
S SSSSS +SS+ + PK +A ++ + ++HPVY GVR+RN KWV E+R P
Sbjct: 117 SSSSSSSSSSSTFSPSQHSGPKAQAQKQSKRPRDCSKHPVYHGVRKRNWGKWVSEIREPR 296
Query: 69 INVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSA 114
KSRIWLGT+ TPEMAARAHDVAALT+KG++A LNF + A
Sbjct: 297 ------KKSRIWLGTFATPEMAARAHDVAALTIKGEAAILNFPEIA 416
>TC216740 similar to UP|O60585 (O60585) Ser/Arg-related nuclear matrix
protein, partial (3%)
Length = 800
Score = 97.4 bits (241), Expect = 5e-21
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +1
Query: 44 TRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKG 103
TRHP++RGVR+R KWV E+R P KSRIWLG++P PEMAA+A+DVAA LKG
Sbjct: 124 TRHPLFRGVRKRRWGKWVSEIREPR------KKSRIWLGSFPAPEMAAKAYDVAAYCLKG 285
Query: 104 KSACLNFADSAWRL-TLPESNDAVEIRRAAMEAAKMFAIE 142
+ A LNF D RL LP + A +I+ AA +AA M ++
Sbjct: 286 RKAQLNFPDEVHRLPLLPSACTARDIQAAAAKAAHMMIVQ 405
>TC216741 similar to UP|Q75UJ6 (Q75UJ6) DREB-like protein, partial (36%)
Length = 769
Score = 96.7 bits (239), Expect = 8e-21
Identities = 53/100 (53%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Frame = +3
Query: 44 TRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKG 103
TRHP++RGVR+R KWV E+R P KSRIWLG++P PEMAA+A+DVAA LKG
Sbjct: 144 TRHPLFRGVRKRRWGKWVSEIREPR------KKSRIWLGSFPAPEMAAKAYDVAAYCLKG 305
Query: 104 KSACLNFADSAWRL-TLPESNDAVEIRRAAMEAAKMFAIE 142
A LNF D RL LP S A +I+ AA +AA M ++
Sbjct: 306 CKAQLNFPDEVHRLPPLPSSCTARDIQAAAAKAAHMMMVQ 425
>TC218622 similar to UP|Q9FQZ8 (Q9FQZ8) Avr9/Cf-9 rapidly elicited protein
111B, partial (26%)
Length = 496
Score = 88.6 bits (218), Expect = 2e-18
Identities = 44/72 (61%), Positives = 51/72 (70%)
Frame = +1
Query: 12 SDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINV 71
S+ S S EV LA PKKRAGR+ F+ETRHPVYRGVRRRN++KWVCE+R P
Sbjct: 295 SEGSRGVAFSDEEVRLAVRHPKKRAGRKKFRETRHPVYRGVRRRNSDKWVCEVREP---- 462
Query: 72 NKNNKSRIWLGT 83
N K+RIWLGT
Sbjct: 463 --NKKTRIWLGT 492
>TC220733 similar to GB|AAS68114.1|45592920|BT011790 At1g71450 {Arabidopsis
thaliana;} , partial (50%)
Length = 773
Score = 87.8 bits (216), Expect = 4e-18
Identities = 52/137 (37%), Positives = 80/137 (57%)
Frame = +1
Query: 49 YRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACL 108
YRGVR+R KWV E+R P KSRIWLG+Y +PEMAA A+DVAAL L+G++A L
Sbjct: 94 YRGVRQRKWGKWVSEIREPG------KKSRIWLGSYESPEMAAAAYDVAALHLRGRAARL 255
Query: 109 NFADSAWRLTLPESNDAVEIRRAAMEAAKMFAIEENHNQRSDRDAVDMNMENSKKNVLEV 168
NF + L P S+ +++ AA +AA MF I + ++ + K +V+ V
Sbjct: 256 NFPELVETLPRPTSSKPEDVQVAAQQAAVMFRISPTMSPINNHQGCVNDNNIIKGSVVPV 435
Query: 169 QVPVLSSEFEDMHHNLL 185
+V + ++ + ++ + L
Sbjct: 436 RVGLSPTQIQAINESPL 486
>TC222567 weakly similar to UP|Q75UJ6 (Q75UJ6) DREB-like protein, partial
(35%)
Length = 580
Score = 80.9 bits (198), Expect = 4e-16
Identities = 45/95 (47%), Positives = 60/95 (62%)
Frame = +3
Query: 42 KETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTL 101
K R +RGVR+R+ ++V E+R+P K+RIWLG++ +PEMAARA+D AA L
Sbjct: 18 KRKRQSAFRGVRKRSWGRYVSEIRLPG------QKTRIWLGSFGSPEMAARAYDSAAFFL 179
Query: 102 KGKSACLNFADSAWRLTLPESNDAVEIRRAAMEAA 136
KG SA LNF D L P S+ +I+ AA EAA
Sbjct: 180 KGTSATLNFPDLVHSLPRPLSSSRRDIQSAAAEAA 284
>BE474139
Length = 428
Score = 75.9 bits (185), Expect = 1e-14
Identities = 41/82 (50%), Positives = 49/82 (59%)
Frame = +1
Query: 32 PKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAA 91
P + + RHP+Y G+R R KWV E+R P +RIWLGT+ TPEMAA
Sbjct: 199 PNMASSSSLSSSKRHPLYHGIRCRGG-KWVTEIREPR------KTNRIWLGTFLTPEMAA 357
Query: 92 RAHDVAALTLKGKSACLNFADS 113
A+DVAAL LKG A LNF DS
Sbjct: 358 AAYDVAALALKGGEAVLNFPDS 423
>TC207659
Length = 787
Score = 74.3 bits (181), Expect = 4e-14
Identities = 51/172 (29%), Positives = 85/172 (48%), Gaps = 2/172 (1%)
Frame = +3
Query: 11 YSDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNIN 70
+S S S +T + +S +P++ + + Y+GVR+R KWV E+R+PN
Sbjct: 81 FSSSPSKKKTMAKP---SSEKPEEHSDSKY--------YKGVRKRKWGKWVSEIRLPN-- 221
Query: 71 VNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRR 130
++ RIWLG+Y TPE AARA D A L+G++A NF D+ + S +I+
Sbjct: 222 ----SRQRIWLGSYDTPEKAARAFDAAMFCLRGRNAKFNFPDNPPDIAGGTSMTPSQIQI 389
Query: 131 AAMEAAKMFAIEENHNQRSDRDAVDMNMENSKKNVLEV--QVPVLSSEFEDM 180
AA + A E H+ R + ++ + + ++ VP L+ D+
Sbjct: 390 AAAQFANA-GPHEGHSGRPEHPPMESPSPSVSEGTIQTDSDVPTLNGSVTDL 542
>TC213190 homologue to UP|Q7Y0Y9 (Q7Y0Y9) Dehydration responsive element
binding protein, partial (98%)
Length = 733
Score = 73.9 bits (180), Expect = 5e-14
Identities = 44/121 (36%), Positives = 64/121 (52%)
Frame = +3
Query: 12 SDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINV 71
S++S+ T+ + S K + ++ YRG+R R KWV E+R PN
Sbjct: 60 SNNSTMITTTKKKTSRRSPTSDKLKNQHPCEKQAMKPYRGIRMRKWGKWVAEIREPN--- 230
Query: 72 NKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRA 131
+SRIWLG+Y TP AARA+D A L+G +A LNF + ++ E ND+V+ A
Sbjct: 231 ---KRSRIWLGSYTTPMAAARAYDTAVFYLRGPTARLNFPELLFQDDQEEGNDSVQHGAA 401
Query: 132 A 132
A
Sbjct: 402 A 404
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.314 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,776,069
Number of Sequences: 63676
Number of extensions: 152549
Number of successful extensions: 1414
Number of sequences better than 10.0: 189
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of query: 226
length of database: 12,639,632
effective HSP length: 94
effective length of query: 132
effective length of database: 6,654,088
effective search space: 878339616
effective search space used: 878339616
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Medicago: description of AC146573.2