BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146571.8 + phase: 0
(886 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AW460119 weakly similar to PIR|D96525|D965 protein T1N15.19 [imp... 105 1e-22
BE823381 weakly similar to GP|18700082|gb| AT5g17790/MVA3_140 {A... 75 1e-13
CA852654 65 2e-10
TC220632 weakly similar to UP|Q9LPG2 (Q9LPG2) T3F20.22 protein (... 61 2e-09
BU550556 60 3e-09
TC231034 similar to UP|Q8S9M8 (Q8S9M8) P53 binding protein (Frag... 57 5e-08
TC226883 similar to GB|AAO63346.1|28950845|BT005282 At1g67325 {A... 49 1e-05
TC212455 weakly similar to UP|Q7QIA8 (Q7QIA8) AgCP3984 (Fragment... 49 1e-05
TC219663 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD pro... 47 4e-05
TC227732 similar to UP|Q6P623 (Q6P623) Fibrillarin, partial (16%) 47 5e-05
CA783257 weakly similar to GP|16074411|emb Description of ANIC-B... 46 6e-05
BQ079975 45 1e-04
CD393767 44 2e-04
TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partia... 43 5e-04
TC210095 similar to UP|Q9LW11 (Q9LW11) Zinc finger protein-like;... 42 0.001
TC213446 similar to UP|Q8S8K1 (Q8S8K1) Predicted protein, partia... 42 0.001
AI460561 41 0.002
TC223805 similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich glyco... 41 0.002
TC208107 similar to UP|Q8RWQ1 (Q8RWQ1) At2g44720/F16B22.21, part... 41 0.003
TC233481 similar to UP|Q7QKC7 (Q7QKC7) AgCP14768 (Fragment), par... 40 0.004
>AW460119 weakly similar to PIR|D96525|D965 protein T1N15.19 [imported] -
Arabidopsis thaliana, partial (16%)
Length = 415
Score = 105 bits (261), Expect = 1e-22
Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
Frame = +3
Query: 233 EGDVCSSCSLRNNCDSAY-LLTNKEDEARTIDIMRMLLTLGFDPINGSSVLNKPLLKQKS 291
EGDVC +C+LR++CD AY +L + E +ARTIDI+R+LL DP+ S P ++
Sbjct: 3 EGDVCGACNLRSSCDRAYVILKDFETDARTIDIVRILLFYALDPLVLSGGDKPP--GREV 176
Query: 292 VKAVVRKLLHEVVKLSSVPIDPNLPPPVIKKPPPKVKQPPPTPKRRVGRD---------- 341
+++ RKLL ++++LS P P P + PT + VG
Sbjct: 177 IESSARKLLSQLIELSESPA-----------PAPASARSKPTAQDAVGEGQSLSVTTNQL 323
Query: 342 --DVEMKRGDWLCPKCDFMNFAKNNVCLQC 369
D EMK+GDW+CPKC+FMNF++N CL C
Sbjct: 324 FKDAEMKKGDWMCPKCNFMNFSRNTQCLNC 413
>BE823381 weakly similar to GP|18700082|gb| AT5g17790/MVA3_140 {Arabidopsis
thaliana}, partial (3%)
Length = 595
Score = 75.1 bits (183), Expect = 1e-13
Identities = 29/74 (39%), Positives = 43/74 (57%)
Frame = -2
Query: 334 PKRRVGRDDVEMKRGDWLCPKCDFMNFAKNNVCLQCDAKRPKRQLLPGEWECTECNFLNY 393
P + ++V K+GD CP+C FMN+A+N CL+C R K+ PG+W C C F+N+
Sbjct: 567 PTKEXNTNEVXXKKGDXTCPQCGFMNYARNTKCLRCPETRXKKH--PGDWNCPGCGFMNF 394
Query: 394 RRNVVCFHCECKRP 407
+ C HC+ P
Sbjct: 393 GSKMKCLHCQEPNP 352
Score = 74.7 bits (182), Expect = 2e-13
Identities = 27/63 (42%), Positives = 35/63 (54%)
Frame = -2
Query: 348 GDWLCPKCDFMNFAKNNVCLQCDAKRPKRQLLPGEWECTECNFLNYRRNVVCFHCECKRP 407
GDW CP C FMNF CL C P + G+W C +C+F NY RN+ C C +RP
Sbjct: 432 GDWNCPGCGFMNFGSKMKCLHCQEPNPSSKKYNGDWSCPKCDFYNYARNMACLKCNTERP 253
Query: 408 PDE 410
++
Sbjct: 252 KEQ 244
>CA852654
Length = 683
Score = 64.7 bits (156), Expect = 2e-10
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2
Query: 345 MKRGDWLCPKCDFMNFAKNNVCLQCDAKRPKRQLLPGEWEC 385
+K+GDW+C KC+F+NFAKN CLQC + RQ+ PGEW C
Sbjct: 455 LKKGDWICNKCNFLNFAKNTRCLQCKERTSNRQINPGEW*C 577
Score = 53.5 bits (127), Expect = 4e-07
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 11/61 (18%)
Frame = +2
Query: 354 KCDFMNFAKNNVCLQCDAKRPKR-----------QLLPGEWECTECNFLNYRRNVVCFHC 402
+C+FMNF +N CL+CD+ +R L G+W C +CNFLN+ +N C C
Sbjct: 350 RCNFMNFTRNIRCLRCDSFFEERINQLKEDNNHLPLKKGDWICNKCNFLNFAKNTRCLQC 529
Query: 403 E 403
+
Sbjct: 530 K 532
>TC220632 weakly similar to UP|Q9LPG2 (Q9LPG2) T3F20.22 protein
(At1g53460/T3F20_21), partial (36%)
Length = 1064
Score = 61.2 bits (147), Expect = 2e-09
Identities = 43/130 (33%), Positives = 62/130 (47%)
Frame = +3
Query: 183 ACLNFGKDRFDLLRSLSRQDIQVLVGFGCPNVDRKVVFSGKLLRKLVHLDEGDVCSSCSL 242
A F +D ++ + LS ++ + FGCP R VF K LRK + E VCS C+L
Sbjct: 336 AANKFARDHREIAKWLSGSALKQVAVFGCPYPHRSGVFPAKSLRKFFEVPENTVCSGCAL 515
Query: 243 RNNCDSAYLLTNKEDEARTIDIMRMLLTLGFDPINGSSVLNKPLLKQKSVKAVVRKLLHE 302
+ +C A K D+ +D + ++ + P SV + L VK V +LL E
Sbjct: 516 QQSCKFANRSVWKCDDTNNLDFLTVMKVI--TPYALESV-HPQLEVPDEVKKSVSQLLKE 686
Query: 303 VVKLSSVPID 312
VVKLS D
Sbjct: 687 VVKLSQTT*D 716
>BU550556
Length = 683
Score = 60.5 bits (145), Expect = 3e-09
Identities = 31/79 (39%), Positives = 42/79 (52%)
Frame = -1
Query: 122 VEFVHPWPEWIQLMERLVHQNYFDHRRKDEDKMVQDLGFDSSEIVHDEGLDFTKDFKSVH 181
+E HPWPEW+QLM+ L+ + YF ++E KM+ + G KDF +
Sbjct: 512 LELAHPWPEWVQLMKCLLDKGYF---CREEGKMLCNAGMG------------MKDFNVIR 378
Query: 182 AACLNFGKDRFDLLRSLSR 200
CLNFG+D F LLR R
Sbjct: 377 TVCLNFGRDHFHLLRRFLR 321
>TC231034 similar to UP|Q8S9M8 (Q8S9M8) P53 binding protein (Fragment),
partial (71%)
Length = 892
Score = 56.6 bits (135), Expect = 5e-08
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Frame = +3
Query: 335 KRRVGRDDVEMKRGDWLCPKCDFMNFAKNNVC-------LQCDAKRPKRQLLP-GEWECT 386
KRR G D + GDW+CP+CD +NFA C ++ + +P ++P G W C
Sbjct: 528 KRRGGPDG--LSEGDWICPRCDNVNFAFRTTCNIKHCGAVKPSSNKPNTAVIPEGSWTCE 701
Query: 387 ECNFLNYRRNVVCFHCECK 405
+C LNY VC +C+
Sbjct: 702 KCGNLNYPFRNVCNRKDCR 758
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 333 TPKRRVGRDDVEMKRGDWLCPKCDFMNFAKNNVCLQ--CDAKRPKRQLLP 380
+P + R+D K GDW CP C +NF+ VC Q C A RP L P
Sbjct: 69 SPGSKRFRNDASRKDGDWTCPNCGNLNFSFRTVCNQGHCGAPRPSLTLTP 218
Score = 30.4 bits (67), Expect = 3.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 348 GDWLCPKCDFMNFAKNNVCLQCDAKRPK 375
G W C KC +N+ NVC + D + K
Sbjct: 684 GSWTCEKCGNLNYPFRNVCNRKDCRNEK 767
Score = 29.3 bits (64), Expect = 7.9
Identities = 12/29 (41%), Positives = 14/29 (47%), Gaps = 2/29 (6%)
Frame = +3
Query: 381 GEWECTECNFLNYRRNVVC--FHCECKRP 407
G+W C C LN+ VC HC RP
Sbjct: 114 GDWTCPNCGNLNFSFRTVCNQGHCGAPRP 200
>TC226883 similar to GB|AAO63346.1|28950845|BT005282 At1g67325 {Arabidopsis
thaliana;} , partial (40%)
Length = 784
Score = 48.5 bits (114), Expect = 1e-05
Identities = 29/94 (30%), Positives = 41/94 (42%), Gaps = 20/94 (21%)
Frame = +3
Query: 331 PPTPKRRVG--RDDVEMKR-----GDWLCPKCDFMNFAKNNVC--LQCDAKRP------- 374
P T R G DD K+ DW CPKC +NF+ VC +C+ +P
Sbjct: 123 PGTMGARPGFFHDDKSQKKDATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPGSQASKS 302
Query: 375 ----KRQLLPGEWECTECNFLNYRRNVVCFHCEC 404
K+++ G W+C +CN +NY C C
Sbjct: 303 DKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNC 404
>TC212455 weakly similar to UP|Q7QIA8 (Q7QIA8) AgCP3984 (Fragment), partial
(11%)
Length = 944
Score = 48.5 bits (114), Expect = 1e-05
Identities = 58/260 (22%), Positives = 95/260 (36%), Gaps = 16/260 (6%)
Frame = +1
Query: 567 NKSKTASGRTERTRSVRKNTSFSRSKEDELDYDSDEQRSLLSKFKSSHVFAADQRRKGRG 626
++S++ +R+RS ++ SK DYD DE+R + + H D RR+
Sbjct: 49 SRSRSIGHTRDRSRSRSIIDEYAHSKRRRSDYDHDEERVRVRGREHGHGSVVDDRRE--- 219
Query: 627 PTKKLSFGSDSDEDGSAGLYSDEDDDLNEAYSSRQNKGNRHDSGRRNFTKDGKSGGGYKS 686
+ + D D D DL+ + + K GK
Sbjct: 220 --YSTRYHNREARDRDRSRDRDVDRDLHREKKQEETSRGKEIEWEH---KRGKE------ 366
Query: 687 NMFGDDFDESPRQSYRNARGSQGSNRDKKRFDDFDGSSRKSYGNDRG-SQGCNRDRKRFD 745
E R+ YR + + +D+ R + DG R+ DR RDR+R
Sbjct: 367 -------RERSRERYR-----RDAEKDRSREREEDGDRRQEKERDRSWDTVFERDRRREK 510
Query: 746 DFDGSSRRSYGNDRGSQGSN----RDRKRFDDFDGSSSRKSY-----------GNDRGSQ 790
+ D S R+ G R N ++R+R DD G R + GND G +
Sbjct: 511 ERDRSRDRTIGGKRDRDPENERDDKNRERRDDRYGHKDRDTANGKDRHLRHEDGNDNGDR 690
Query: 791 GSNRNRKQFDDFDGSSSRKS 810
+R + +++ R S
Sbjct: 691 YRKHSRHEENEYHWERKRNS 750
Score = 47.8 bits (112), Expect = 2e-05
Identities = 61/260 (23%), Positives = 101/260 (38%), Gaps = 7/260 (2%)
Frame = +1
Query: 624 GRGPTKKLSFGSDSDEDGSAGLYSDEDDDLNEAYSSRQNKGNRHDSGRRNFTKDGKSGGG 683
GR ++ S G D S + + A+S R+ HD R G+ G
Sbjct: 37 GRYRSRSRSIGHTRDRSRSRSIIDEY------AHSKRRRSDYDHDEERVRVR--GREHG- 189
Query: 684 YKSNMFGDDFDESPRQSYRNARGSQGSNRDKKRFDDFDGSSRKSYGNDRGSQG--CNRDR 741
++ D + S R R AR +RD+ R D D + + S+G +
Sbjct: 190 -HGSVVDDRREYSTRYHNREAR-----DRDRSRDRDVDRDLHREKKQEETSRGKEIEWEH 351
Query: 742 KRFDDFDGSSRRSYGNDRGSQGSNRDRKRFDDFDGSSSRKSYGNDRGSQGSNRNRKQFDD 801
KR R +R + + +DR R + DG ++ + R+R++ +
Sbjct: 352 KR------GKERERSRERYRRDAEKDRSREREEDGDRRQEKERDRSWDTVFERDRRREKE 513
Query: 802 FDGSSSRKSYGN---DSGSQGSNRGRKRFDDFDGSSRK--SYGNDRGSRGNDRSRQKFDD 856
D S R G D ++ ++ R+R DD G + + G DR R D +
Sbjct: 514 RDRSRDRTIGGKRDRDPENERDDKNRERRDDRYGHKDRDTANGKDRHLRHEDGNDNGDRY 693
Query: 857 REHGRGQFNKYSMDEKGGSD 876
R+H R + N+Y + K SD
Sbjct: 694 RKHSRHEENEYHWERKRNSD 753
>TC219663 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD protein {Homo
sapiens;} , partial (14%)
Length = 1176
Score = 47.0 bits (110), Expect = 4e-05
Identities = 41/177 (23%), Positives = 65/177 (36%), Gaps = 7/177 (3%)
Frame = +3
Query: 694 DESPRQSYRNARGSQGSNRDKKRFDDFDGSSRKSYGNDRGSQGCNRDRKRFDDFDGSSRR 753
D R+ + + +RD+ R D D + DR + RDR R ++D R
Sbjct: 357 DRDHREDRHHRDRDRNRDRDRDRERDRDRGRDRDRTRDRDRER-GRDRDRDREYDRHRER 533
Query: 754 SYGNDRGSQGSNRDRKRFDDFDGSSSRKSYGN-------DRGSQGSNRNRKQFDDFDGSS 806
+ G R R R D+D S+ N DRG + ++ D D
Sbjct: 534 DRDYEVGDPDRGRSRDRESDYDRVESKHGERNHDYEPEDDRGRHNQYEHGRRHADPDHDP 713
Query: 807 SRKSYGNDSGSQGSNRGRKRFDDFDGSSRKSYGNDRGSRGNDRSRQKFDDREHGRGQ 863
R + N G + + R D DG + S +++ R DRE+ R +
Sbjct: 714 ERYDHYNHGDDHGDHYNQYR--DHDGMEDDYHAGRATSESHEKERSHDVDREYQRSE 878
Score = 37.0 bits (84), Expect = 0.038
Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 13/160 (8%)
Frame = +3
Query: 735 QGCNRDRKRFDDFDGSSRRSYGNDRGSQGSNRDRKRFDDFDGSSSR-KSYGNDRG-SQGS 792
+G ++DR+R + S R D +RDR R D D R + G DR ++
Sbjct: 294 RGRDKDRERERSREHSHERVRDRDHREDRHHRDRDRNRDRDRDRERDRDRGRDRDRTRDR 473
Query: 793 NRNRKQFDDFDGSSSR---KSYGNDSGSQGSNRGRKRFDDFD------GSSRKSY--GND 841
+R R + D D R + + G R R R D+D G Y +D
Sbjct: 474 DRERGRDRDRDREYDRHRERDRDYEVGDPDRGRSRDRESDYDRVESKHGERNHDYEPEDD 653
Query: 842 RGSRGNDRSRQKFDDREHGRGQFNKYSMDEKGGSDFRNSR 881
RG ++ D +H +++ Y+ + G + R
Sbjct: 654 RGRHNQYEHGRRHADPDHDPERYDHYNHGDDHGDHYNQYR 773
>TC227732 similar to UP|Q6P623 (Q6P623) Fibrillarin, partial (16%)
Length = 1693
Score = 46.6 bits (109), Expect = 5e-05
Identities = 95/445 (21%), Positives = 154/445 (34%), Gaps = 10/445 (2%)
Frame = +3
Query: 414 NKTQDRKYSSGPNF-NKMGSRQEVSNAWNFDFDDNESDGADVANFEYADSHGIDKDFFSD 472
N+ Q+ +SSG N S + + WN N + +N+ + + +
Sbjct: 69 NENQNSHWSSGRNEPGNQDSNLDKKSNWNSGNSGNLASDPKSSNWNSGSGNSNENSNWGT 248
Query: 473 NNARRVGW-EDDFAKNRSVPGSHDDEYVNAGPGPSRPRTGFDDFEDEDDIDSYELETETG 531
N + W + KN S H D PG G + + +S +
Sbjct: 249 NVNNKSSWGTGNENKNSSWSSGHSD------PGNQDANQG-----KKSNWNSGNSGNQPS 395
Query: 532 TSVSRMEATKTNFSETEDSL--DWE--DSEDIDDKMHAHNKSKTASGRTERTRSVRKNTS 587
S + K+++S ++ +W D + D N + SG + S R N+S
Sbjct: 396 DPNSNWNSNKSSWSAGNENKKSNWSSGDPGNTDSNWGNKNNCISGSGDANQNTSWRSNSS 575
Query: 588 FSRSKEDELDYDSDEQRSLLSKFKSSHVFAADQRRKGRGPTKKLSFGSDSDEDGSAGLYS 647
++ + D + + S V + R RG SD G G
Sbjct: 576 WNTANASSDDGNEGSNEN------SDGVGGGNWRGGYRGR-------GGSDRGGFRG--- 707
Query: 648 DEDDDLNEAYSSRQNKGNRHDSGRRNFTKDGKSGGGYKSNMFGDDFDESPRQSYRNARGS 707
+ +G R G R + G GG + FG S R+ + GS
Sbjct: 708 ----------RGFRGRGERGGFGGRG--EHGGFGGRGERGGFGGR-GRSDREGFGGRWGS 848
Query: 708 QGSN--RDKKRFDDFDGSSRKSYGNDRGSQGCNRDRKRFDDFDGSSRRSYGNDRGSQGSN 765
+G R + R D G + + D G G + +K G+ + N GSQ N
Sbjct: 849 EGGRGGRGRGRNDQSGGWNNR---RDSGEDGPSDWKK------GADNGGWKNSNGSQAWN 1001
Query: 766 RDRKRFDDFDGSSSRKSYGNDRGSQGSNRNRKQFDDFDGSSSRKSYGNDSGSQGSNRGR- 824
+D D S + +QGS RN+ S S S ND+GSQ N+G
Sbjct: 1002QDTGDKDRQSWSQGNADKEHPSWNQGSGRNQ--------SWSSASGANDNGSQAWNQGNA 1157
Query: 825 -KRFDDFDGSSRKSYGNDRGSRGND 848
K ++ + K + GN+
Sbjct: 1158DKEHPSWNQAGNKQSWSSASGGGNN 1232
>CA783257 weakly similar to GP|16074411|emb Description of ANIC-BP-1 protein
ligand {Homo sapiens}, partial (4%)
Length = 456
Score = 46.2 bits (108), Expect = 6e-05
Identities = 42/132 (31%), Positives = 62/132 (46%)
Frame = +3
Query: 183 ACLNFGKDRFDLLRSLSRQDIQVLVGFGCPNVDRKVVFSGKLLRKLVHLDEGDVCSSCSL 242
A L F +DR +LLR LS +DI +V G P + R S + ++ S
Sbjct: 117 AFLAFARDRPNLLRLLSTRDIAAVVEHGSPFLFRDADDSVRKMK--------------SF 254
Query: 243 RNNCDSAYLLTNKEDEARTIDIMRMLLTLGFDPINGSSVLNKPLLKQKSVKAVVRKLLHE 302
+N D+ L T D A T+D+M+ LL+ +P S L K+ V++ VR L E
Sbjct: 255 LSNGDANVLDT---DRANTVDLMKFLLSYASNPFFSSE--GNSLNKRDLVESSVRNLFGE 419
Query: 303 VVKLSSVPIDPN 314
+ KL+ PN
Sbjct: 420 LFKLNYSAPGPN 455
>BQ079975
Length = 407
Score = 45.4 bits (106), Expect = 1e-04
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Frame = +3
Query: 348 GDWLCPKCDFMNFAKNNVCLQCDAKR-----------PKRQLLPGEWECTECNFLNYRRN 396
GDW+C C+ +NF K C C + + + LPG+W C C NY
Sbjct: 93 GDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALPGDWFC-NCGAHNYANR 269
Query: 397 VVCFHC 402
C+ C
Sbjct: 270 SSCYRC 287
>CD393767
Length = 607
Score = 44.3 bits (103), Expect = 2e-04
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -3
Query: 354 KCDFMNFAKNNVCLQCDAKRPKRQLLPGEWEC 385
+C+F+NFAK CLQC + RQ+ PGEW C
Sbjct: 395 RCNFLNFAKYTRCLQCKERTSHRQINPGEW*C 300
Score = 31.6 bits (70), Expect(2) = 0.061
Identities = 15/45 (33%), Positives = 23/45 (50%), Gaps = 11/45 (24%)
Frame = -2
Query: 354 KCDFMNFAKNNVCLQCDAKRPKR-----------QLLPGEWECTE 387
+C+FMNF +N CL+CD+ +R L G+W C +
Sbjct: 606 RCNFMNFTRNIRCLRCDSFFEERINPLKEDNNHLPLKKGDWICNK 472
Score = 23.5 bits (49), Expect(2) = 0.061
Identities = 7/16 (43%), Positives = 10/16 (61%)
Frame = -3
Query: 388 CNFLNYRRNVVCFHCE 403
CNFLN+ + C C+
Sbjct: 392 CNFLNFAKYTRCLQCK 345
>TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partial (88%)
Length = 1691
Score = 43.1 bits (100), Expect = 5e-04
Identities = 46/197 (23%), Positives = 74/197 (37%), Gaps = 1/197 (0%)
Frame = +3
Query: 531 GTSVSRMEATKTNFSETEDSLDWEDSED-IDDKMHAHNKSKTASGRTERTRSVRKNTSFS 589
G+ R A + +F E E+ D E D I+DK + + + S ER R R ++
Sbjct: 732 GSLEPRRSALEEDFEEEEEKEDNEQPVDEIEDKAYEKDHYRGRSPTRERDRDRRHDSHRH 911
Query: 590 RSKEDELDYDSDEQRSLLSKFKSSHVFAADQRRKGRGPTKKLSFGSDSDEDGSAGLYSDE 649
R ++ + DYD D R +GRG + D D D L ++
Sbjct: 912 RDRDYDRDYDRDY-----------------DRERGRGRDRDRDRERDRDRD-RYRLREEK 1037
Query: 650 DDDLNEAYSSRQNKGNRHDSGRRNFTKDGKSGGGYKSNMFGDDFDESPRQSYRNARGSQG 709
D + R+ + D GRR +S + G D+ + R+AR S
Sbjct: 1038DYGRDREGRERERREKDRDRGRRRSHSRSRSRSRDRREHDGGDYRK------RHARSSVS 1199
Query: 710 SNRDKKRFDDFDGSSRK 726
R +D + +K
Sbjct: 1200PRRHGDGLEDGEPKKKK 1250
Score = 39.7 bits (91), Expect = 0.006
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 6/157 (3%)
Frame = +3
Query: 698 RQSYRNARGSQGSNRDKKRFDDFDGSSRKSYGNDRGSQGCNRDRKRFDDFDGSSRR---- 753
R+ R+ R +RD+ D+D + Y +RG +G +RDR R D D R
Sbjct: 870 RERDRDRRHDSHRHRDR----DYDRDYDRDYDRERG-RGRDRDRDRERDRDRDRYRLREE 1034
Query: 754 -SYGNDRGSQGSNRDRKRFDDFDGSSSRKSYGNDRGSQGSNRNRKQFDDFDGSSSRKSYG 812
YG DR +G R+R+ D G R+S+ R R + DG RK +
Sbjct: 1035 KDYGRDR--EGRERERREKDRDRG--RRRSHSRSRSRSRDRR------EHDGGDYRKRHA 1184
Query: 813 NDSGSQGSNRGRKRFDDF-DGSSRKSYGNDRGSRGND 848
S S R+ D DG +K ++ + +D
Sbjct: 1185 RSSVSP-----RRHGDGLEDGEPKKKKKKEKKEKKDD 1280
Score = 35.8 bits (81), Expect = 0.085
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 12/186 (6%)
Frame = +3
Query: 648 DEDDDLNEAYSSRQNKGNRHDSGR-RNFTKDGKSGGGYKSNMFGD-DFDESPRQSYRNAR 705
+E +D + ++K D R R+ T++ + S+ D D+D + Y R
Sbjct: 783 EEKEDNEQPVDEIEDKAYEKDHYRGRSPTRERDRDRRHDSHRHRDRDYDRDYDRDYDRER 962
Query: 706 GSQGSNRDKKRFDDFDGS-----SRKSYGNDRGSQG-----CNRDRKRFDDFDGSSRRSY 755
G +G +RD+ R D D K YG DR + +RDR R RRS+
Sbjct: 963 G-RGRDRDRDRERDRDRDRYRLREEKDYGRDREGRERERREKDRDRGR--------RRSH 1115
Query: 756 GNDRGSQGSNRDRKRFDDFDGSSSRKSYGNDRGSQGSNRNRKQFDDFDGSSSRKSYGNDS 815
S+ +RDR+ + DG RK + R S R+ +D + +K +
Sbjct: 1116SR---SRSRSRDRR---EHDGGDYRKRHA--RSSVSPRRHGDGLEDGEPKKKKKKEKKEK 1271
Query: 816 GSQGSN 821
G++
Sbjct: 1272KDDGTD 1289
>TC210095 similar to UP|Q9LW11 (Q9LW11) Zinc finger protein-like; Ser/Thr
protein kinase-like protein, partial (25%)
Length = 671
Score = 42.4 bits (98), Expect = 0.001
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Frame = +1
Query: 348 GDWLCPKCDFMNFAKNNVCLQC-----------DAKRPKRQLLPGEWECT--ECNFLNYR 394
GDW+C C +NF K + C C + + L G+W CT C N+
Sbjct: 85 GDWMCGACQHINFKKRDACQSCAYPKFGGPDPTTYRYNSTETLAGDWYCTAMNCGAHNFA 264
Query: 395 RNVVCFHC 402
CF C
Sbjct: 265 SRSSCFRC 288
>TC213446 similar to UP|Q8S8K1 (Q8S8K1) Predicted protein, partial (37%)
Length = 424
Score = 42.0 bits (97), Expect = 0.001
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Frame = +3
Query: 346 KRGDWLCPKCDFMNFAKNNVCLQC-------DAKRPK-RQLLP--GEWECTECNFLNYRR 395
+ GDW C C+ N+A + C +C D K P + LP G+W CT C NY
Sbjct: 51 REGDWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTPSDSKWLPRIGDWICTGCTNNNYAS 230
Query: 396 NVVCFHC 402
C C
Sbjct: 231 REKCKKC 251
Score = 31.2 bits (69), Expect = 2.1
Identities = 19/72 (26%), Positives = 29/72 (39%), Gaps = 15/72 (20%)
Frame = +3
Query: 381 GEWECTECNFLNYRRNVVCFHC-------ECKRPPD--------EFLENKTQDRKYSSGP 425
G+WEC+ CN NY C C + K P D +++ + Y+S
Sbjct: 57 GDWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTPSDSKWLPRIGDWICTGCTNNNYASRE 236
Query: 426 NFNKMGSRQEVS 437
K G +EV+
Sbjct: 237 KCKKCGQPKEVA 272
>AI460561
Length = 362
Score = 41.2 bits (95), Expect = 0.002
Identities = 22/34 (64%), Positives = 27/34 (78%), Gaps = 1/34 (2%)
Frame = +2
Query: 255 KEDEA-RTIDIMRMLLTLGFDPINGSSVLNKPLL 287
+EDE +T+DIMR++LT G DPING SV NKP L
Sbjct: 242 REDEGGQTVDIMRIILTYGLDPING-SVENKPCL 340
>TC223805 similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich glycoprotein
DZ-HRGP precursor, partial (6%)
Length = 468
Score = 41.2 bits (95), Expect = 0.002
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +2
Query: 126 HPWPEWIQLMERLVHQNYFDHRRKDEDKMVQDLGFDSSEIVHDEGLDFTKDFKSVHAACL 185
HPWPEW+ ++RL + Y +D + + S+ ACL
Sbjct: 296 HPWPEWVSFVDRLNTKGYLPKTSSSDDT-----------------VSLYANMNSLKDACL 424
Query: 186 NFGKDRFDLLRSL 198
+F +DR+DL L
Sbjct: 425 SFARDRYDLFNLL 463
>TC208107 similar to UP|Q8RWQ1 (Q8RWQ1) At2g44720/F16B22.21, partial (15%)
Length = 1023
Score = 40.8 bits (94), Expect = 0.003
Identities = 53/186 (28%), Positives = 64/186 (33%), Gaps = 7/186 (3%)
Frame = +2
Query: 697 PRQSYRNARGSQGSNRDKKRFDDFDGSSRKSYGNDR-----GSQGCNRDRKRFDDFDGSS 751
P SYR +G RD +D GS R D G + R R D G S
Sbjct: 47 PHLSYR-----EGRPRD---YDALSGSKRPYAAIDDLPPRYADTGARQSRARLDYDYGDS 202
Query: 752 RRSYGNDRGSQGSNRDRKRFDDFDGSSSRKSYGNDRGSQGSNRNRKQFDDFDGSSSRKSY 811
YG+ G + R S G GS+ S SS+ S+
Sbjct: 203 ASQYGDAYGDR---------------LGRSSVGYGGGSRSS------------ISSQDSH 301
Query: 812 GNDSGSQGSNRGRKRFD--DFDGSSRKSYGNDRGSRGNDRSRQKFDDREHGRGQFNKYSM 869
G S QG + G F D G SYG D SRG+D + GRG S
Sbjct: 302 GMYSSRQGMSYGGGSFGSGDVGGMYSSSYGGDYISRGSDVGGSSYSSVYSGRGVGGGSSY 481
Query: 870 DEKGGS 875
GGS
Sbjct: 482 MGGGGS 499
>TC233481 similar to UP|Q7QKC7 (Q7QKC7) AgCP14768 (Fragment), partial (4%)
Length = 592
Score = 40.0 bits (92), Expect = 0.004
Identities = 45/169 (26%), Positives = 65/169 (37%), Gaps = 4/169 (2%)
Frame = +3
Query: 637 SDEDGSAGLYSDEDDDLNEAYSSRQNKGNRHDSGRRNFTKDGKSGGGYKSNMFGDDFDES 696
S + GS+ D DDD ++ +S ++ K R S +R+ ++ DD E
Sbjct: 21 SGKRGSSRKKGDLDDDGSDKHSGKRRKRGR--SKKRSAKREVSDS---------DDSREE 167
Query: 697 PRQSYRNARGSQGSNRDKKRFDDFDGSSRKSYGNDRGSQGCNRDRKRFDDFDGSS----R 752
R+ R + + D++ RKS R R R R D D S R
Sbjct: 168 RRRRKRRREPRRKRDNSSDEDDEYKRRHRKSRKEKR------RRRSRLSDPDSSEDFIRR 329
Query: 753 RSYGNDRGSQGSNRDRKRFDDFDGSSSRKSYGNDRGSQGSNRNRKQFDD 801
N R S S+ D ++D SRK G D G R+R DD
Sbjct: 330 HKRKNKRASSSSDTDSSGYND-----SRK--GRDVNKSGKRRSRHHGDD 455
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.314 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,023,307
Number of Sequences: 63676
Number of extensions: 656251
Number of successful extensions: 10409
Number of sequences better than 10.0: 275
Number of HSP's better than 10.0 without gapping: 5616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8896
length of query: 886
length of database: 12,639,632
effective HSP length: 106
effective length of query: 780
effective length of database: 5,889,976
effective search space: 4594181280
effective search space used: 4594181280
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Medicago: description of AC146571.8