BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146565.7 + phase: 0 /pseudo
(508 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CF922341 123 2e-28
BU084093 70 2e-12
AW706233 70 3e-12
TC228885 47 2e-05
CF922207 40 0.003
TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein ... 39 0.006
TC230101 similar to UP|Q41707 (Q41707) Extensin class 1 protein ... 38 0.012
TC220458 homologue to UP|Q94KA7 (Q94KA7) BZIP transcription fact... 37 0.016
BQ630253 37 0.027
CA853919 homologue to PIR|T11622|T11 extensin class 1 precursor ... 37 0.027
CF921210 36 0.036
TC224639 homologue to UP|Q43682 (Q43682) Extensin-like protein (... 35 0.061
TC209106 similar to UP|Q41101 (Q41101) Phaseolin G-box binding p... 35 0.080
TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxida... 35 0.080
TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 35 0.10
TC224734 homologue to UP|Q09085 (Q09085) Hydroxyproline-rich gly... 34 0.14
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 34 0.14
TC224753 homologue to UP|Q09085 (Q09085) Hydroxyproline-rich gly... 34 0.14
BQ741699 homologue to GP|3204132|emb extensin {Cicer arietinum},... 34 0.14
TC224573 homologue to UP|Q41707 (Q41707) Extensin class 1 protei... 34 0.18
>CF922341
Length = 675
Score = 123 bits (308), Expect = 2e-28
Identities = 58/124 (46%), Positives = 84/124 (66%), Gaps = 1/124 (0%)
Frame = +1
Query: 145 KYDELQRDVKALRGKEKFG-KTAYDLCLVPNVQIPHKFKIPNFEKYKGNSCPEEHLKMYV 203
K D L+ ++A+ G E + +L LVPN+ P KFK+ +F+KYKG +CP+ HLKMY
Sbjct: 304 KLDHLEEGLRAIEGGEDYAFANLEELFLVPNIITPPKFKVLDFDKYKGTTCPKNHLKMYC 483
Query: 204 RRMPAYAQDDQVLIYYF*ESLAGPASKWYTNLDKTKIQTFRDLYEAFVEQYNYNVDMAPD 263
++M AYA+D+++LI+ F ESL G A WYTNL+ +++ +++DL AFV QY YN DM
Sbjct: 484 QKMGAYAKDEELLIHSFQESLTGVAVTWYTNLEPSRVHSWKDLMVAFVRQYQYNFDMVLS 663
Query: 264 RSDL 267
R L
Sbjct: 664 RMQL 675
>BU084093
Length = 421
Score = 70.5 bits (171), Expect = 2e-12
Identities = 43/150 (28%), Positives = 62/150 (40%)
Frame = -1
Query: 353 GAKKFGNNFPRKKAPEVGMVAHGRPQQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQ 412
G ++ + P A G + P Q Q A P N + G + +P +
Sbjct: 415 GTHQYAQHHPSFSA-HTGNASSSTPVQPKAPAQREAPQVPTPNTTRPVGNSNTTRNFPPR 239
Query: 413 LYQQQQPRPQAQRTQFDPIPMKYADFLPALLEKNLVHTRPPPKVPERLPAWYRPDKFCAF 472
+Q+ F P+PM Y D LP+L+ +L P + P WY P+ C +
Sbjct: 238 PFQE-----------FTPLPMTYEDLLPSLIANHLAVVTPGRVLQPPFPKWYDPNATCKY 92
Query: 473 HQGAPGHDTEYCYTLKAAVQKLIRDKDLSF 502
H G PGH E C LK VQ L+ L+F
Sbjct: 91 HGGVPGHSVEKCLALKYKVQHLMDAGWLTF 2
>AW706233
Length = 376
Score = 69.7 bits (169), Expect = 3e-12
Identities = 33/72 (45%), Positives = 48/72 (65%), Gaps = 1/72 (1%)
Frame = -3
Query: 144 EKYDELQRDVKALRGKEKFG-KTAYDLCLVPNVQIPHKFKIPNFEKYKGNSCPEEHLKMY 202
EK D L+ KA+ G + + +L LV N+ P KFK+ NF+KYKG +CP+ HLKMY
Sbjct: 347 EKLDHLKERFKAIEGGQDYAFANLEELFLVXNIISPPKFKVLNFDKYKGTTCPKNHLKMY 168
Query: 203 VRRMPAYAQDDQ 214
++M AYA+D++
Sbjct: 167 CQKMGAYAKDEK 132
>TC228885
Length = 901
Score = 47.0 bits (110), Expect = 2e-05
Identities = 29/74 (39%), Positives = 37/74 (49%), Gaps = 5/74 (6%)
Frame = -3
Query: 427 QFDPIPMKYADFLPALLEKNLV-----HTRPPPKVPERLPAWYRPDKFCAFHQGAPGHDT 481
+F PIP+ YAD LP LL+ ++V PP + E Y + CA H APG
Sbjct: 620 EFTPIPVSYADLLPYLLDNSMVAITLAKVHQPPFLRE-----YDSNAMCACHGEAPGRSI 456
Query: 482 EYCYTLKAAVQKLI 495
E+ LK VQ LI
Sbjct: 455 EHYRALKRKVQGLI 414
>CF922207
Length = 616
Score = 39.7 bits (91), Expect = 0.003
Identities = 26/69 (37%), Positives = 37/69 (52%), Gaps = 3/69 (4%)
Frame = -1
Query: 437 DFLPALLEKNLVHTRPPPKVPERLPAWYRP---DKFCAFHQGAPGHDTEYCYTLKAAVQK 493
+ +P L+ ++V P KVP+ P ++R + CA+H GAPGH E+C T K V
Sbjct: 535 NLIPYPLDNSMVAITPT-KVPQ--PPFFREYDSNATCAYHGGAPGHSIEHCMTPKHKV*S 365
Query: 494 LIRDKDLSF 502
LI L F
Sbjct: 364 LIDTG*LKF 338
>TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (67%)
Length = 1240
Score = 38.9 bits (89), Expect = 0.006
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S +P Y +P +P P++ ++ + +P
Sbjct: 174 PSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYY--------YKSPPPPSPVPK 329
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y H PPPP P Y +P
Sbjct: 330 PPYYYHSPPPPSPSPPPPYYYKSP 401
Score = 34.7 bits (78), Expect = 0.10
Identities = 22/84 (26%), Positives = 34/84 (40%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ P + P
Sbjct: 702 PSPPPPYYYKSPPPPSPSPPPPYYYQSPPPPSPTPHPPYYYK-------SPPPPTSHPPP 860
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
+ YV+ PPPP P Y++P
Sbjct: 861 YHYVS--PPPPSPSPPPPYHYTSP 926
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/84 (27%), Positives = 32/84 (37%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ P E P
Sbjct: 366 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSP------PPPKEHVHPP 527
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
+ Y H PPPP P Y +P
Sbjct: 528 YYY--HSPPPPSPSPPPPYYYKSP 593
Score = 33.9 bits (76), Expect = 0.18
Identities = 21/84 (25%), Positives = 31/84 (36%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ + + P
Sbjct: 126 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVPKPPYY--------YHSPPPPSPSPP 281
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP VP Y +P
Sbjct: 282 PPYYYKSPPPPSPVPKPPYYYHSP 353
Score = 32.0 bits (71), Expect = 0.67
Identities = 20/84 (23%), Positives = 30/84 (34%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ + + P
Sbjct: 558 PSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPSPSPPPPYY--------YHSPPPPSPSPP 713
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 714 PPYYYKSPPPPSPSPPPPYYYQSP 785
>TC230101 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (47%)
Length = 944
Score = 37.7 bits (86), Expect = 0.012
Identities = 22/82 (26%), Positives = 33/82 (39%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ +A SA P Y +P +P + P++ ++ + P
Sbjct: 509 PSPPPPYYYKAPPPPSASPPPAYYYKSPPPPSPSPTPPYY--------YKTAPPPSPSPP 664
Query: 92 HQYVAHVPPPPIKVPLAAMTYS 113
Y PPPP K P Y+
Sbjct: 665 PPYYYKSPPPPEKPPAPTPYYN 730
Score = 33.5 bits (75), Expect = 0.23
Identities = 23/101 (22%), Positives = 35/101 (33%)
Frame = +2
Query: 29 QNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQ 88
Q PPPPP+ ++ S P Y +P +P P++ ++ +
Sbjct: 209 QYTSPPPPPYLYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY--------YKSPPPPSP 364
Query: 89 MPTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEPIFH 129
P Y PPPP K P Y P P ++
Sbjct: 365 SPPPPYYYKSPPPPEKSPAPTPYYYKSPPPPSPSPPPPYYY 487
Score = 28.1 bits (61), Expect = 9.7
Identities = 23/98 (23%), Positives = 32/98 (32%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y P P S P ++ + PT
Sbjct: 461 PSPPPPYYYKSPPPPSPSPPPPYYYKAP--PPPSASPP------PAYYYKSPPPPSPSPT 616
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEPIFH 129
Y PPP P Y +P P P ++
Sbjct: 617 PPYYYKTAPPPSPSPPPPYYYKSPPPPEKPPAPTPYYN 730
>TC220458 homologue to UP|Q94KA7 (Q94KA7) BZIP transcription factor 3,
partial (41%)
Length = 776
Score = 37.4 bits (85), Expect = 0.016
Identities = 44/165 (26%), Positives = 61/165 (36%), Gaps = 15/165 (9%)
Frame = +2
Query: 19 SELVKVLSTAQNQPPPPPPFSTQAEASSSAI--PDW---TIYADTPTHSAPQRSAPWFQP 73
SE+ K +++ PPPP Q+ + + P+W Y+ P H S P P
Sbjct: 296 SEMDKTTKEKESKTPPPPTSQEQSSTTGTGTINPEWPGFQAYSPIPPHGF-LASNPQAHP 472
Query: 74 FTAG-EIFRPIACEAQMPTHQYVAHVPP---------PPIKVPLAAMTYSAPVMHTIPQN 123
+ G + F P P H YVA PP PP P +P
Sbjct: 473 YMWGVQQFMP---PYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFNPFAMPSPNGIAEASG 643
Query: 124 EEPIFHSGNMEAYDGVSDLREKYDELQRDVKALRGKEKFGKTAYD 168
P G+MEA DG K E++ + R K G+ YD
Sbjct: 644 NTP----GSMEA-DG------KPPEVKEKLPIKRSKGSLGRLEYD 745
>BQ630253
Length = 429
Score = 36.6 bits (83), Expect = 0.027
Identities = 21/84 (25%), Positives = 31/84 (36%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ + S P Y +P +P P++ P + P
Sbjct: 136 PSPPPPYYYHSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPSPSPPPP 315
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
+ Y + PPPP P Y +P
Sbjct: 316 YHYTS--PPPPSPAPAPKYIYKSP 381
Score = 33.1 bits (74), Expect = 0.30
Identities = 22/95 (23%), Positives = 34/95 (35%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ + + P
Sbjct: 88 PSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPSPSPPPPYY--------YHSPPPPSPSPP 243
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEP 126
Y PPPP P + + P +T P P
Sbjct: 244 PPYYYKSPPPPSPSPPPSPSPPPPYHYTSPPPPSP 348
>CA853919 homologue to PIR|T11622|T11 extensin class 1 precursor - cowpea,
partial (30%)
Length = 454
Score = 36.6 bits (83), Expect = 0.027
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Frame = +3
Query: 24 VLSTAQNQPPPP-----PPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWF--QPFTA 76
+L T N PPPP PP+ + S P Y +P +P P++ P
Sbjct: 24 LLLTIINAPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPP 203
Query: 77 GEIFRPIACEAQMPTHQYVAHVPPPPIKVPLAAMTYSAP 115
++ + P Y H PPPP P Y +P
Sbjct: 204 PYYYKSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYHSP 320
Score = 32.7 bits (73), Expect = 0.39
Identities = 20/83 (24%), Positives = 30/83 (36%)
Frame = +3
Query: 33 PPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPTH 92
PPPPP+ ++ S P Y +P +P P++ + + P
Sbjct: 192 PPPPPYYYKSPPPPSPSPPPPYYYHSPPPPSPSPPPPYY--------YHSPPPPSPSPPP 347
Query: 93 QYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 348 PYYYKSPPPPSPSPPPXYYYQSP 416
Score = 30.8 bits (68), Expect = 1.5
Identities = 20/76 (26%), Positives = 29/76 (37%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ + S P Y +P +P P++ P + P
Sbjct: 237 PSPPPPYYYHSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYKSP------PPPSPSPPPX 398
Query: 92 HQYVAHVPPPPIKVPL 107
+ Y + PP IKV L
Sbjct: 399 YYYQSPPPPSTIKVLL 446
Score = 29.3 bits (64), Expect = 4.4
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPT-----HSAPQRSAPWFQPFTAGEIFRPIACE 86
P PPPP+ ++ S P Y +P + +P +P P +
Sbjct: 111 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPPYYYKSPPPPSPSPPP---PYYYHSPPPP 281
Query: 87 AQMPTHQYVAHVPPPPIKVPLAAMTYSAP 115
+ P Y H PPPP P Y +P
Sbjct: 282 SPSPPPPYYYHSPPPPSPSPPPPYYYKSP 368
>CF921210
Length = 790
Score = 36.2 bits (82), Expect = 0.036
Identities = 25/69 (36%), Positives = 32/69 (46%)
Frame = +2
Query: 427 QFDPIPMKYADFLPALLEKNLVHTRPPPKVPERLPAWYRPDKFCAFHQGAPGHDTEYCYT 486
+F PIP+ YAD L LL+ ++V L Y + C GA H E+C
Sbjct: 338 EFTPIPVSYADLLSYLLDNSMVAITLAKVHQPPLF*GYDSNATCG---GALRHSIEHCRA 508
Query: 487 LKAAVQKLI 495
LK VQ LI
Sbjct: 509 LKRKVQGLI 535
>TC224639 homologue to UP|Q43682 (Q43682) Extensin-like protein (Fragment),
partial (48%)
Length = 702
Score = 35.4 bits (80), Expect = 0.061
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ P + P
Sbjct: 247 PSPPPPYVYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPP-----PPSHSPPPPH 411
Query: 92 HQYVAHVPPPPI 103
H Y+ + PPPP+
Sbjct: 412 HPYLYNSPPPPV 447
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/84 (27%), Positives = 33/84 (38%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ SSS P +P +P P+ I++ + P
Sbjct: 10 PSPPPPYVYKSPPSSSPSPPSPYVYKSPPPPSPSPPPPY--------IYKSPPPPSPSPP 165
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
YV PPPP P + S P
Sbjct: 166 PPYVYKSPPPPSPSPPPYVYKSPP 237
Score = 32.0 bits (71), Expect = 0.67
Identities = 24/101 (23%), Positives = 37/101 (35%), Gaps = 2/101 (1%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P +Y P S P P+ +++ + P
Sbjct: 154 PSPPPPYVYKSPPPPSPSPPPYVYKSPPPPS-PSPPPPY--------VYKSPPPPSPSPP 306
Query: 92 HQYVAHVPPPPIKVPLAAMTYSA--PVMHTIPQNEEPIFHS 130
Y PPPP P Y + P H+ P P ++
Sbjct: 307 PPYYYKSPPPPSPSPPPPYYYKSPPPPSHSPPPPHHPYLYN 429
>TC209106 similar to UP|Q41101 (Q41101) Phaseolin G-box binding protein PG1,
partial (40%)
Length = 1101
Score = 35.0 bits (79), Expect = 0.080
Identities = 17/38 (44%), Positives = 23/38 (59%), Gaps = 1/38 (2%)
Frame = +3
Query: 1 LKTKIEELESMKTNMD-ELSELVKVLSTAQNQPPPPPP 37
LK+K+ L+S KT ++ +L K L A PPPPPP
Sbjct: 444 LKSKLNVLDSEKTELEKQLDSTKKELELATKNPPPPPP 557
>TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxidase ATP26a
{Arabidopsis thaliana;} , partial (49%)
Length = 731
Score = 35.0 bits (79), Expect = 0.080
Identities = 27/94 (28%), Positives = 37/94 (38%), Gaps = 4/94 (4%)
Frame = +3
Query: 26 STAQNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIAC 85
S A P PPPP A +S++A + TP S+P R +P G P +
Sbjct: 150 SQASRSPAPPPPPPRSASSSTTASSPTAV---TPPSSSPPRPSP-------GPSATPTST 299
Query: 86 EAQMPTHQYVAHVPPPPIK----VPLAAMTYSAP 115
T + P PP+ P A T+S P
Sbjct: 300 SPSPATPSTSSSAPRPPLSSPAPTPSPAPTFSPP 401
>TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (22%)
Length = 1296
Score = 34.7 bits (78), Expect = 0.10
Identities = 25/98 (25%), Positives = 32/98 (32%)
Frame = +1
Query: 29 QNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQ 88
Q+ PPPPPP S S P + + P P + P P E
Sbjct: 217 QHSPPPPPPHSPPPPPPSPPPPVYPYLSPPPPPPVHSPPPPVYSP-PPPPPSPPPCIEPP 393
Query: 89 MPTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEP 126
P + PPPP P + P H P + P
Sbjct: 394 PPPPPCIEPPPPPPSPPPCEEHSPPPPSPHPAPYHPPP 507
Score = 30.8 bits (68), Expect = 1.5
Identities = 26/84 (30%), Positives = 32/84 (37%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
PPPPP FS P Y +P PQ S P P + P P
Sbjct: 148 PPPPPVFSPP--------PPVQYYYSSP--PPPQHSPPPPPPHSP----PPPPPSPPPPV 285
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
+ Y++ PPPP+ P YS P
Sbjct: 286 YPYLSPPPPPPVHSP-PPPVYSPP 354
Score = 28.9 bits (63), Expect = 5.7
Identities = 25/84 (29%), Positives = 30/84 (34%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
PPPPPP S P T +P +P +P P +F P P
Sbjct: 55 PPPPPP--------SPPPPSPTYCVRSPPPPSPPPPSP---PPPPPPVFSP------PPP 183
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
QY PPPP P +S P
Sbjct: 184 VQYYYSSPPPPQHSPPPPPPHSPP 255
>TC224734 homologue to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (48%)
Length = 990
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ P + P
Sbjct: 284 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVSHPPYYYKSP------PPPTSSPPPP 445
Query: 92 HQYVAHVPPPPIKVP 106
+ YV+ PPPP K P
Sbjct: 446 YHYVS--PPPPTKSP 484
Score = 32.7 bits (73), Expect = 0.39
Identities = 20/84 (23%), Positives = 31/84 (36%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ ++ + P
Sbjct: 140 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPSPP 295
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 296 PPYYYKSPPPPSPSPPPPYYYKSP 367
Score = 32.7 bits (73), Expect = 0.39
Identities = 20/84 (23%), Positives = 31/84 (36%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ ++ + P
Sbjct: 92 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPSPP 247
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 248 PPYYYKSPPPPSPSPPPPYYYKSP 319
>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (57%)
Length = 1652
Score = 34.3 bits (77), Expect = 0.14
Identities = 26/75 (34%), Positives = 34/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 32 PPPPPPFS----TQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEA 87
PPP PP + T A S++ P T TP+ S P R P P + + P+A
Sbjct: 362 PPPAPPATSTSPTSRPARSASPPKTTTAPSTPSTSNPSRKCPTTSP--SSKSAPPLA--- 526
Query: 88 QMPTHQYVAHVPPPP 102
PT + H PPPP
Sbjct: 527 -PPTPR---HPPPPP 559
>TC224753 homologue to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (48%)
Length = 1088
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ P + P
Sbjct: 359 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVSHPPYYYKSP------PPPTSSPPPP 520
Query: 92 HQYVAHVPPPPIKVP 106
+ YV+ PPPP K P
Sbjct: 521 YHYVS--PPPPTKSP 559
Score = 33.5 bits (75), Expect = 0.23
Identities = 20/84 (23%), Positives = 32/84 (37%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP++ ++ S P Y +P +P P++ ++ + P
Sbjct: 167 PSPPPPYNYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPAPP 322
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 323 PPYYYKSPPPPDPSPPPPYYYKSP 394
>BQ741699 homologue to GP|3204132|emb extensin {Cicer arietinum}, partial
(69%)
Length = 431
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWF---------QPFTAGEIFRP 82
P PPPP+ ++ S +P Y +P +P P++ P + P
Sbjct: 42 PSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPSLYYYKSP 221
Query: 83 IACEAQMPTHQYVAHVPPPPIKVPLAAMTYSAP 115
+ P + YV+ PPPP P Y++P
Sbjct: 222 PPPTSHPPPYHYVS--PPPPSPSPPPPYHYTSP 314
Score = 30.4 bits (67), Expect = 2.0
Identities = 21/84 (25%), Positives = 30/84 (35%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P P P + P + P
Sbjct: 138 PSPPPPYYYKSPPPPSPSPPSLYYYKSPP-------PPTSHPPPYHYVSPPPPSPSPPPP 296
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
+ Y + PPPP P Y +P
Sbjct: 297 YHYTS--PPPPSPAPAPKYIYKSP 362
>TC224573 homologue to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (44%)
Length = 1112
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWF-------QPFTAGEIF---R 81
P PPPP+ ++ S P Y +P +P P++ P + +
Sbjct: 384 PSPPPPYYYRSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVSHPPYYYKSP 563
Query: 82 PIACEAQMPTHQYVAHVPPPPIKVP 106
P + + P +QYV+ PPPP K P
Sbjct: 564 PPSTPSPPPPYQYVS--PPPPTKSP 632
Score = 32.3 bits (72), Expect = 0.52
Identities = 21/84 (25%), Positives = 30/84 (35%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P P P++ +R + P
Sbjct: 288 PSPPPPYYYKSPPPPSPSPPPHYYYKSPPPPDPSPPPPYY--------YRSPPPPSPSPP 443
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 444 PPYYYKSPPPPSPSPPPPYYYKSP 515
Score = 31.2 bits (69), Expect = 1.1
Identities = 20/84 (23%), Positives = 30/84 (34%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ ++ P
Sbjct: 96 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY--------YKSPPPPDPSPP 251
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 252 PPYYYKSPPPPDPSPPPPYYYKSP 323
Score = 30.8 bits (68), Expect = 1.5
Identities = 19/84 (22%), Positives = 30/84 (35%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ P Y +P +P P++ ++ + P
Sbjct: 48 PSPPPPYYYKSPPPPDPSPPPPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPSPP 203
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 204 PPYYYKSPPPPDPSPPPPYYYKSP 275
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,574,904
Number of Sequences: 63676
Number of extensions: 370091
Number of successful extensions: 6482
Number of sequences better than 10.0: 191
Number of HSP's better than 10.0 without gapping: 4117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5668
length of query: 508
length of database: 12,639,632
effective HSP length: 101
effective length of query: 407
effective length of database: 6,208,356
effective search space: 2526800892
effective search space used: 2526800892
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Medicago: description of AC146565.7