BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146560.8 + phase: 0
(220 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206636 homologue to UP|Q9SC39 (Q9SC39) Germin-like protein (Fr... 323 3e-89
TC206635 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Frag... 317 3e-87
TC231794 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Frag... 287 3e-78
BI427150 231 1e-61
TC211313 weakly similar to UP|Q9SC38 (Q9SC38) Germin-like protei... 217 3e-57
TC227305 similar to GB|AAB51752.1|1934730|ATU95036 germin-like p... 193 5e-50
TC224703 similar to UP|RHRE_PEA (Q9S8P4) Rhicadhesin receptor pr... 191 3e-49
TC221249 weakly similar to UP|GL32_ARATH (Q9SR72) Germin-like pr... 160 4e-40
TC224786 similar to GB|AAP12867.1|30017267|BT006218 At3g52820 {A... 145 2e-35
BE608701 weakly similar to GP|6689036|emb| germin-like protein {... 139 8e-34
AW348512 similar to SP|Q9S8P4|RHRE Rhicadhesin receptor precurso... 139 1e-33
AW349074 similar to PIR|T07004|T07 germin homolog - potato, part... 138 2e-33
TC215814 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 136 7e-33
TC214768 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 134 3e-32
TC210597 weakly similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protei... 134 3e-32
TC225520 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 132 9e-32
TC225519 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 131 3e-31
TC214056 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 127 3e-30
TC211239 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 126 7e-30
TC214055 weakly similar to UP|Q9AR81 (Q9AR81) Germin-like protei... 125 1e-29
>TC206636 homologue to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
complete
Length = 931
Score = 323 bits (829), Expect = 3e-89
Identities = 169/222 (76%), Positives = 185/222 (83%), Gaps = 2/222 (0%)
Frame = +2
Query: 1 MKTTYLFVTAFLALASCAF-AFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFF 59
MK Y F+ A LAL S A+DPSPLQDFCVA + K+GVFVNGK CKDPKL DFF
Sbjct: 59 MKVVY-FLVAILALTSTVVSAYDPSPLQDFCVAAKE-KDGVFVNGKFCKDPKLVKAEDFF 232
Query: 60 FSVKEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVL 119
V+ NT+NPLGS+VTPV V+ + GLNTLGISLARID+A +GLNPPHTHPR TEILIVL
Sbjct: 233 KHVEPANTANPLGSQVTPVFVDQLPGLNTLGISLARIDYAPKGLNPPHTHPRGTEILIVL 412
Query: 120 EGTLYVGFVTSNPE-NRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGV 178
EGTLYVGFVTSN + NRL TKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPG
Sbjct: 413 EGTLYVGFVTSNQDGNRLFTKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGA 592
Query: 179 ITIANAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQFWVDNN 220
ITIANA+F +NP ISSEVLTKAFQVD +I+D LQKQ W DNN
Sbjct: 593 ITIANALFKANPPISSEVLTKAFQVDKSIIDYLQKQSWYDNN 718
>TC206635 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
partial (95%)
Length = 897
Score = 317 bits (812), Expect = 3e-87
Identities = 163/221 (73%), Positives = 177/221 (79%), Gaps = 1/221 (0%)
Frame = +3
Query: 1 MKTTYLFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFF 60
MK YL V ++ A+DPSPLQDFCVA + K+GVFVNGK CKDPKL DFF
Sbjct: 66 MKVVYLLVALLALTSTVVSAYDPSPLQDFCVAAKE-KDGVFVNGKFCKDPKLVKAEDFFR 242
Query: 61 SVKEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLE 120
V+ G T NPLGS VT V V+ + GLNTLGI+LARIDFA +GLN PHTHPR TEILIVLE
Sbjct: 243 HVEPGKTDNPLGSNVTQVFVDQLPGLNTLGIALARIDFAPKGLNAPHTHPRGTEILIVLE 422
Query: 121 GTLYVGFVTSNPE-NRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVI 179
GTLYVGFVTSN + NRL TKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPG I
Sbjct: 423 GTLYVGFVTSNQDGNRLFTKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGAI 602
Query: 180 TIANAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQFWVDNN 220
TIANA+F +NP ISSEVLTKAFQVD I+D LQKQ W DNN
Sbjct: 603 TIANALFKANPPISSEVLTKAFQVDKTIIDYLQKQSWYDNN 725
>TC231794 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
partial (95%)
Length = 757
Score = 287 bits (734), Expect = 3e-78
Identities = 144/195 (73%), Positives = 163/195 (82%), Gaps = 1/195 (0%)
Frame = +3
Query: 27 QDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFSVKEGNTSNPLGSKVTPVTVNDILGL 86
QDFCVA + K+GVFVNGK CKDPKL P DFF V+ GNT NP ++VTPV+V+ + GL
Sbjct: 12 QDFCVAAKE-KDGVFVNGKFCKDPKLVKPEDFFLHVEPGNTDNPNNAQVTPVSVDQLPGL 188
Query: 87 NTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYVGFVTSNPE-NRLITKVLNKGD 145
NTLGISLARI+FA +G+NPPHTHPRA+EILIVLEGTLYVGFVTSN + NRL TKVLNKGD
Sbjct: 189 NTLGISLARINFAPKGINPPHTHPRASEILIVLEGTLYVGFVTSNQDGNRLFTKVLNKGD 368
Query: 146 VFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQVDN 205
VFVFPIGLIHFQLNVGYGNAVAIA L SQN G ITIANA+F +NP IS EVLTKAFQVD
Sbjct: 369 VFVFPIGLIHFQLNVGYGNAVAIAALGSQNAGTITIANALFKANPPISPEVLTKAFQVDQ 548
Query: 206 NIVDNLQKQFWVDNN 220
++D+L K+ W D N
Sbjct: 549 KLIDDLXKKSWYDMN 593
>BI427150
Length = 422
Score = 231 bits (590), Expect = 1e-61
Identities = 117/140 (83%), Positives = 123/140 (87%), Gaps = 2/140 (1%)
Frame = +2
Query: 16 SCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFF-SVKEGNTSNPLGSK 74
S AFA+DPSPLQDFCVAINDTK GVFVNGK CKDPKLA DFFF + GNTSNPLGSK
Sbjct: 2 SIAFAYDPSPLQDFCVAINDTKTGVFVNGKFCKDPKLAKAEDFFFPGLGPGNTSNPLGSK 181
Query: 75 VTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYVGFVTSNP-E 133
VT VTVN+ILGLNTLGISLARIDFA +GLNPPHTHPR TEIL+VLEGTLYVGFV SN +
Sbjct: 182 VTAVTVNEILGLNTLGISLARIDFAPKGLNPPHTHPRGTEILVVLEGTLYVGFVASNQND 361
Query: 134 NRLITKVLNKGDVFVFPIGL 153
NRL TKVLNKGDVFVFPIGL
Sbjct: 362 NRLFTKVLNKGDVFVFPIGL 421
>TC211313 weakly similar to UP|Q9SC38 (Q9SC38) Germin-like protein
(Fragment), partial (88%)
Length = 737
Score = 217 bits (553), Expect = 3e-57
Identities = 108/171 (63%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Frame = +2
Query: 45 KVCKDPKLATPNDFFFSVKEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLN 104
K CK+PK DF+ V+ GN SN LGS VTPV V+ + GLNTLG+SLARID+ S GLN
Sbjct: 2 KFCKEPKDVKAEDFYKEVEPGNPSNQLGSAVTPVFVDQLPGLNTLGLSLARIDYESMGLN 181
Query: 105 PPHTHPRATEILIVLEGTLYVGFVTSNPE-NRLITKVLNKGDVFVFPIGLIHFQLNVGYG 163
PPH HPRATEI+IVLEG L VGF TSN + NRL +K+L KGDVFV P+GLI FQ N G G
Sbjct: 182 PPHIHPRATEIIIVLEGILLVGFATSNQDGNRLFSKMLKKGDVFVSPMGLIQFQYNPGRG 361
Query: 164 NAVAIAGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQ 214
AV+I+ SS NPG +T+ANAVF SNP+IS+++LTK+FQVD ++D LQ Q
Sbjct: 362 RAVSISAFSSPNPGTVTVANAVFRSNPRISTDILTKSFQVDKKVIDELQNQ 514
>TC227305 similar to GB|AAB51752.1|1934730|ATU95036 germin-like protein
{Arabidopsis thaliana;} , partial (96%)
Length = 1034
Score = 193 bits (491), Expect = 5e-50
Identities = 103/211 (48%), Positives = 138/211 (64%), Gaps = 2/211 (0%)
Frame = +3
Query: 4 TYLFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFS-- 61
T+ + F S FA DP LQD CVA+ +GV VNG CK T DFFF+
Sbjct: 123 TFAILVFFCCAISFTFASDPDTLQDLCVAL--PSSGVKVNGFACKAESNVTEADFFFAGL 296
Query: 62 VKEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEG 121
K G T+N LGS VT V+ I GLNTLG+S +RID+ + GLNPPHTHPRATEI+ VL+G
Sbjct: 297 AKPGATNNTLGSVVTAANVDKIPGLNTLGVSFSRIDYKAGGLNPPHTHPRATEIVFVLDG 476
Query: 122 TLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITI 181
L VGF+T+ N+LI+K + KG++FVFP GL+H+Q N G A ++ +SQ PG ++I
Sbjct: 477 QLDVGFITT--ANKLISKSIKKGEIFVFPKGLVHYQKNNGDKPASVLSAFNSQLPGTVSI 650
Query: 182 ANAVFGSNPKISSEVLTKAFQVDNNIVDNLQ 212
A A+F S P + +VL +AFQ+D VD+++
Sbjct: 651 AAALFTSTPTVPDDVLAQAFQIDTKKVDDIK 743
>TC224703 similar to UP|RHRE_PEA (Q9S8P4) Rhicadhesin receptor precursor
(Germin-like protein), partial (91%)
Length = 1092
Score = 191 bits (484), Expect = 3e-49
Identities = 107/209 (51%), Positives = 136/209 (64%), Gaps = 2/209 (0%)
Frame = +1
Query: 8 VTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFSV--KEG 65
VT L LA+ + A DP PLQD CVA D + V VNG CKD +DFF + K G
Sbjct: 157 VTLALVLATVS-ASDPDPLQDLCVA--DLASAVKVNGFTCKDAAKVNASDFFSDILAKPG 327
Query: 66 NTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYV 125
T+N GS VT V I GLNTLG+SL+RID+A G+NPPHTHPRATE++ VLEGTL V
Sbjct: 328 ATNNTYGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVFVLEGTLDV 507
Query: 126 GFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAV 185
GF+T+ N LI+K ++KG++FVFP GL+HFQ N G A IA +SQ PG +IA +
Sbjct: 508 GFITT--ANVLISKSISKGEIFVFPKGLVHFQKNNGKEQASVIAAFNSQLPGTQSIALTL 681
Query: 186 FGSNPKISSEVLTKAFQVDNNIVDNLQKQ 214
F + P + VLTKAFQV V+ ++ +
Sbjct: 682 FAATPPVPDNVLTKAFQVGTKEVEKIKSR 768
>TC221249 weakly similar to UP|GL32_ARATH (Q9SR72) Germin-like protein
subfamily 3 member 2 precursor, partial (58%)
Length = 1000
Score = 160 bits (405), Expect = 4e-40
Identities = 94/215 (43%), Positives = 121/215 (55%), Gaps = 1/215 (0%)
Frame = +2
Query: 2 KTTYLFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFS 61
K L V +A A A DP P+ DFC+A + N CK+ AT DF +S
Sbjct: 95 KVAVLLVVLLFIIA--ALASDPDPVMDFCIAKSPD------NSFSCKNSSTATVEDFTYS 250
Query: 62 -VKEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLE 120
+K G V N GLNTLG+S R DF G+N PH HPRATE+ VLE
Sbjct: 251 GIKSPGNFKQTGFSSMAVNSNVFPGLNTLGVSFVRADFGVGGVNVPHFHPRATEVAFVLE 430
Query: 121 GTLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVIT 180
G +Y GFV +N N++ KVL KG+V VFP GL+HFQ+NVG A + SQNPG++
Sbjct: 431 GKIYSGFVDTN--NKVFAKVLEKGEVMVFPRGLVHFQMNVGDRPATILGSFDSQNPGLMR 604
Query: 181 IANAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQF 215
I NAVFGS+ I E+L KAF + + + L+K+F
Sbjct: 605 IPNAVFGSD--IKEELLEKAFGLSSKELSKLKKRF 703
>TC224786 similar to GB|AAP12867.1|30017267|BT006218 At3g52820 {Arabidopsis
thaliana;} , partial (82%)
Length = 1398
Score = 145 bits (365), Expect = 2e-35
Identities = 73/127 (57%), Positives = 93/127 (72%)
Frame = -1
Query: 83 ILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYVGFVTSNPENRLITKVLN 142
I GLNTLG+SL+RID+A G+NPPHTHPRATE++ VLEGTLYVGF+T+ N LI+K ++
Sbjct: 375 IPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVFVLEGTLYVGFITT--ANVLISKSIS 202
Query: 143 KGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQ 202
KG++FVFP GL+HFQ N G A IA +SQ PG +IA +F + P + VLTKAFQ
Sbjct: 201 KGEIFVFPKGLVHFQKNNGKEQASVIAAFNSQLPGTQSIALTLFAATPPVPDNVLTKAFQ 22
Query: 203 VDNNIVD 209
V V+
Sbjct: 21 VGTKEVE 1
>BE608701 weakly similar to GP|6689036|emb| germin-like protein {Pisum
sativum}, partial (48%)
Length = 439
Score = 139 bits (351), Expect = 8e-34
Identities = 76/141 (53%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
Frame = +2
Query: 38 NGVFVNGKVCKDPKLATPNDFFFSVKEGNTSNPLGSKVTPVTVNDILGLNTLGISLARID 97
NGV+VNGK+C L P D F V+ G+T+N L ++P V GLNTLG+S++RID
Sbjct: 17 NGVYVNGKLCTHANLTIPEDNFRHVEPGSTANQLSLGLSPANVAH*PGLNTLGVSMSRID 196
Query: 98 FASRGLNPPHTHPRATEILIVLEGTLYVGFVTSNPEN-RLITKVLNKGDVFVFPIGLIHF 156
+A + LNPPHTHPR TE+L+V+EGTL VG V N +N RL + LNKGDV PIGL
Sbjct: 197 YAQKDLNPPHTHPRGTEMLMVMEGTLCVGLVCCNQDNDRLFSIELNKGDVSEVPIGLGDD 376
Query: 157 QLNVGYGNAVAIAGLSSQNPG 177
NV GNA I LSSQN G
Sbjct: 377 ANNVRQGNAGRITDLSSQNAG 439
>AW348512 similar to SP|Q9S8P4|RHRE Rhicadhesin receptor precursor
(Germin-like protein). [Garden pea] {Pisum sativum},
partial (72%)
Length = 604
Score = 139 bits (350), Expect = 1e-33
Identities = 76/152 (50%), Positives = 99/152 (65%)
Frame = -3
Query: 63 KEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGT 122
K G T+ GS VT V I GLNTLG+SL+RID+A G+NPPHTHPRATE++ VLEGT
Sbjct: 587 KPGATNXTYGSXVTGAXVQKIPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVFVLEGT 408
Query: 123 LYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIA 182
L VGF+T+ N LI+K ++KG++FVFP GL+ FQ A IA SQ G +IA
Sbjct: 407 LDVGFITT--ANVLISKSISKGEIFVFPKGLVLFQNINEKEQASVIAAFXSQLHGTQSIA 234
Query: 183 NAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQ 214
+F + P + VLTKAFQV V+ ++ +
Sbjct: 233 LTLFAATPPVPDNVLTKAFQVGTKEVEKIKSR 138
>AW349074 similar to PIR|T07004|T07 germin homolog - potato, partial (70%)
Length = 597
Score = 138 bits (347), Expect = 2e-33
Identities = 71/152 (46%), Positives = 96/152 (62%)
Frame = -3
Query: 63 KEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGT 122
K G T+N G VT V+ + GLNT G+ L+RID+A G+NP HTH RATE++ VLEG
Sbjct: 583 KPGATNNTFGXLVTGANVHKVPGLNTXGVXLSRIDYAXGGINPLHTHSRATELVFVLEGQ 404
Query: 123 LYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIA 182
LYV F+T+ N LI+K +NKGD+FVFP GL+HFQ N A I+ +SQ PG + A
Sbjct: 403 LYVXFITTC--NVLISKSINKGDIFVFPKGLLHFQKNNAKVPAAVISAFNSQLPGTQSTA 230
Query: 183 NAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQ 214
+F + P + VLT+ FQV V ++ +
Sbjct: 229 TTLFAATPSVPDHVLTQTFQVGTKEVQKIKSR 134
>TC215814 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
partial (95%)
Length = 1087
Score = 136 bits (343), Expect = 7e-33
Identities = 85/209 (40%), Positives = 121/209 (57%), Gaps = 2/209 (0%)
Frame = +1
Query: 6 LFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFSV--K 63
LF L+L S + A + DFCVA NG G CK P T +DF +S
Sbjct: 124 LFFNIILSLLSLSHA----SVVDFCVADYTGPNGPA--GYSCKSPAKVTVDDFVYSGLGT 285
Query: 64 EGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTL 123
GNTSN + + VTP G+N LGIS+AR+D A+ G+ P HTHP A+E+L+V++GT+
Sbjct: 286 AGNTSNIIKAAVTPAFDAQFPGVNGLGISIARLDLAAGGVIPLHTHPGASELLVVVQGTI 465
Query: 124 YVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIAN 183
GFV S +N + K L KGDV V+P GL+HFQ+N G A+A SS NPG+ +
Sbjct: 466 CTGFVAS--DNTVYLKTLKKGDVMVYPQGLLHFQINDGESQALAFVSFSSANPGLQILDF 639
Query: 184 AVFGSNPKISSEVLTKAFQVDNNIVDNLQ 212
++F S+ +E++T+ +D +V L+
Sbjct: 640 SLFKSD--FPTELITQTTFIDAAVVKKLK 720
>TC214768 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
partial (95%)
Length = 953
Score = 134 bits (337), Expect = 3e-32
Identities = 77/180 (42%), Positives = 107/180 (58%), Gaps = 2/180 (1%)
Frame = +1
Query: 12 LALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFSVK--EGNTSN 69
++L +F + + DFCVA D + G CK P T +DF +S GNTSN
Sbjct: 52 ISLIFSLLSFSHASVLDFCVA--DYAGPIGPAGYSCKKPSKVTADDFAYSGLGIAGNTSN 225
Query: 70 PLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYVGFVT 129
+ + VTP GLN LGIS AR+D A+ G+ P HTHP A+E+L+V+EG++ GF++
Sbjct: 226 IIKAAVTPAFDAQFAGLNGLGISAARLDLAAGGVIPLHTHPGASELLVVIEGSILAGFIS 405
Query: 130 SNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAVFGSN 189
S N + K L KGDV FP GL+HFQ+N G +A+AI SS NPG+ + A+F S+
Sbjct: 406 S--ANIVYLKTLKKGDVMAFPQGLLHFQINAGKSSALAIVSFSSSNPGLQILDFALFKSS 579
>TC210597 weakly similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, partial
(87%)
Length = 830
Score = 134 bits (337), Expect = 3e-32
Identities = 84/210 (40%), Positives = 115/210 (54%)
Frame = +2
Query: 6 LFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFSVKEG 65
LF+ A L+ S A S + DFCVA D K G CK PK T +DF F + G
Sbjct: 32 LFIFALLSFTSHA-----SNVNDFCVA--DLKGPDSPTGYHCKPPKTVTSHDFVFHLGPG 190
Query: 66 NTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYV 125
NTSN S +T V D +N L +S+ARID A G+ P HTHP A EI++++ G +
Sbjct: 191 NTSNVFKSAITSAFVKDFPAVNGLSLSVARIDIAQGGVVPMHTHPGANEIVMMVPGEINA 370
Query: 126 GFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAV 185
GF+T++P + L GDV V P IHF +N G GNA+ A SS NP V I+ +
Sbjct: 371 GFITTDP---VYQNTLKPGDVMVIPQAQIHFLVNSGKGNAIFYAAYSSANPRVQPISILL 541
Query: 186 FGSNPKISSEVLTKAFQVDNNIVDNLQKQF 215
FG+N +SS + + +D++ V L+ F
Sbjct: 542 FGNN--LSSNTVAQTTIIDDSEVRKLKAIF 625
>TC225520 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 834
Score = 132 bits (333), Expect = 9e-32
Identities = 83/212 (39%), Positives = 115/212 (54%), Gaps = 1/212 (0%)
Frame = +1
Query: 5 YLFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFS-VK 63
+LF+ A ++ S A + DFCVA D K +G CK P T +DF FS
Sbjct: 43 FLFLFALVSFTSHA------SVNDFCVA--DLKGPDSPSGYQCKPPNTVTVDDFVFSGFV 198
Query: 64 EGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTL 123
GNT+N + +T V D G+N LG+S AR+D A G P HTHP ATE+LI++EG +
Sbjct: 199 AGNTTNTFNAALTSAFVTDFPGVNGLGVSAARLDIAKGGSIPMHTHPAATELLIMVEGQI 378
Query: 124 YVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIAN 183
GF+T L TK L GD+ VFP G +HFQ+N G G A A SS NPG +
Sbjct: 379 TAGFMT---PTALYTKTLKPGDIMVFPQGQLHFQVNSGNGKATAFLAFSSANPGAQLLDL 549
Query: 184 AVFGSNPKISSEVLTKAFQVDNNIVDNLQKQF 215
+FG+ + S+++ + +D V L+ +F
Sbjct: 550 LLFGNT--LPSDLVAQTTFLDVAQVKKLKARF 639
>TC225519 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 961
Score = 131 bits (329), Expect = 3e-31
Identities = 82/211 (38%), Positives = 115/211 (53%), Gaps = 1/211 (0%)
Frame = +2
Query: 6 LFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFS-VKE 64
LF+ A ++ S A + DFCVA D K +G CK P T +DF FS
Sbjct: 50 LFLFALVSFTSHA------SVNDFCVA--DLKGPDSPSGYQCKPPNTVTVDDFVFSGFVA 205
Query: 65 GNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLY 124
GNT+N + +T V D G+N LG+S+AR+D A G P HTHP ATE+LI++EG +
Sbjct: 206 GNTTNTFNAALTSAFVTDFPGVNGLGVSVARLDIAKGGSIPMHTHPAATELLIMVEGQIT 385
Query: 125 VGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANA 184
GF+T L TK L GD+ VFP G +HFQ+N G G A A SS NPG +
Sbjct: 386 AGFMT---PTALYTKTLKPGDIMVFPQGQLHFQVNSGNGKATAFLAFSSANPGAQLLDLL 556
Query: 185 VFGSNPKISSEVLTKAFQVDNNIVDNLQKQF 215
+FG+ + S+++ + +D V ++ +F
Sbjct: 557 LFGNT--LPSDLVAQTTFLDVAQVKKVKARF 643
>TC214056 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
complete
Length = 1020
Score = 127 bits (320), Expect = 3e-30
Identities = 77/189 (40%), Positives = 110/189 (57%), Gaps = 2/189 (1%)
Frame = +2
Query: 26 LQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFS--VKEGNTSNPLGSKVTPVTVNDI 83
+QDFCVA D K G CK P T +DF ++ + N +N + + VTP V
Sbjct: 71 VQDFCVA--DLKGADTPAGYPCKPPANVTSDDFVYTGLAEAANVTNIINAAVTPAFVAQF 244
Query: 84 LGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYVGFVTSNPENRLITKVLNK 143
GLN L +S AR+D G+ P HTHP A E+LIVL+G + GF++S N + KVL K
Sbjct: 245 PGLNGLELSAARLDLGPSGVIPLHTHPGANELLIVLQGHILAGFISSG--NIVYQKVLKK 418
Query: 144 GDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQV 203
G++ VFP GL+HFQ+ VG A+A SS NPG+ + A+F SN S+ ++T+ +
Sbjct: 419 GELMVFPQGLLHFQIAVGKRKALAFPVFSSANPGLQILDFALFASN--FSTPLVTQTTFL 592
Query: 204 DNNIVDNLQ 212
D ++V L+
Sbjct: 593 DPDLVKKLK 619
>TC211239 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 877
Score = 126 bits (317), Expect = 7e-30
Identities = 83/216 (38%), Positives = 116/216 (53%), Gaps = 1/216 (0%)
Frame = +3
Query: 1 MKTTYLFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFF 60
MK Y+F LAL S + + DFCVA + K +G CK P T NDF
Sbjct: 45 MKMIYIFF--LLALLSST---SHASVNDFCVA--NLKGPDSPSGYQCKPPNTVTVNDFVL 203
Query: 61 S-VKEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVL 119
S GNT+N + +TP V ++ G+N LGIS AR+D A G P H+HP A+EILI++
Sbjct: 204 SGFVAGNTTNAFNAALTPAFVTELPGVNGLGISAARLDLAKGGSVPMHSHPGASEILIMV 383
Query: 120 EGTLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVI 179
+G + G +T + K L GDV VFP GL+HFQ N G G A A SS NPG
Sbjct: 384 KGQITAGILT---PGAVYEKTLKPGDVMVFPQGLLHFQANSGKGKATAFVAFSSANPGAQ 554
Query: 180 TIANAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQF 215
+ +FG++ + S+++ + +D V L+ +F
Sbjct: 555 LLDLLLFGNS--LPSDLVAQTTFLDVAQVKKLKARF 656
>TC214055 weakly similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
complete
Length = 901
Score = 125 bits (315), Expect = 1e-29
Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 2/210 (0%)
Frame = +1
Query: 5 YLFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKVCKDPKLATPNDFFFS--V 62
+L + L+L S + +QDFCVA D K +G CK P T +DF ++
Sbjct: 16 FLHIVFLLSLLSST---SHATVQDFCVA--DLKGADTPSGYPCKPPANVTSDDFVYTGLA 180
Query: 63 KEGNTSNPLGSKVTPVTVNDILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGT 122
+ N +N + + VTP V GLN L +S AR+D G+ P HTHP A E+LIVL+G
Sbjct: 181 EAANVTNIINAAVTPAFVAQFPGLNGLDLSAARLDLGPGGVIPLHTHPGANELLIVLQGH 360
Query: 123 LYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIA 182
+ GF++S N + KVL KG++ VFP GL+HFQ+ VG A+A SS PG+ +
Sbjct: 361 ILAGFISSG--NIVYQKVLKKGELMVFPQGLLHFQIAVGKRKALAFPVFSSAFPGLQILD 534
Query: 183 NAVFGSNPKISSEVLTKAFQVDNNIVDNLQ 212
A+F SN S+ ++T+ +D IV L+
Sbjct: 535 FALFASN--FSTPLVTQTTFLDPAIVKKLK 618
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,269,740
Number of Sequences: 63676
Number of extensions: 116646
Number of successful extensions: 652
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of query: 220
length of database: 12,639,632
effective HSP length: 93
effective length of query: 127
effective length of database: 6,717,764
effective search space: 853156028
effective search space used: 853156028
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Medicago: description of AC146560.8