BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146553.10 - phase: 0
(301 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC216902 similar to UP|Q8LAN3 (Q8LAN3) Prolyl 4-hydroxylase alph... 505 e-143
BE823168 251 2e-67
TC232158 231 3e-61
TC227194 similar to UP|Q8T5S8 (Q8T5S8) Prolyl 4-hydroxylase alph... 218 2e-57
TC229833 213 7e-56
TC228929 195 2e-50
AW472148 184 4e-47
BM521712 similar to GP|21618073|gb| prolyl 4-hydroxylase alpha s... 178 3e-45
TC219496 173 7e-44
TC222092 similar to UP|Q8VZD7 (Q8VZD7) AT3g28480/MFJ20_16, parti... 166 1e-41
TC219497 150 7e-37
BI971299 147 4e-36
TC222216 similar to UP|Q9LSI6 (Q9LSI6) Prolyl 4-hydroxylase alph... 126 1e-29
BM093125 111 3e-25
BE822836 105 3e-23
TC222832 similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, par... 103 7e-23
TC227193 similar to UP|Q9FKX6 (Q9FKX6) Prolyl 4-hydroxylase, alp... 91 8e-19
TC227195 81 5e-16
TC223094 weakly similar to UP|Q6ZL00 (Q6ZL00) Prolyl 4-hydroxyla... 79 3e-15
TC222148 weakly similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxyla... 60 9e-10
>TC216902 similar to UP|Q8LAN3 (Q8LAN3) Prolyl 4-hydroxylase alpha
subunit-like protein, partial (89%)
Length = 1381
Score = 505 bits (1300), Expect = e-143
Identities = 242/297 (81%), Positives = 266/297 (89%), Gaps = 1/297 (0%)
Frame = +3
Query: 6 RVWCSIIVPLLLICKIHFALGSYAGT-SAIIDPTKVKQVSWKPRAFVYKGFLTDLECDHL 64
RVW ++ LLLI K SYAG+ S++I+P+KVKQ+SWKPRAFVY+GFLTDLECDHL
Sbjct: 192 RVW--FLLFLLLISKCDHVWSSYAGSASSVINPSKVKQISWKPRAFVYEGFLTDLECDHL 365
Query: 65 ISIAKSELKRSAVADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDKISSWTFLPKENG 124
IS+AKSELKRSAVADNLSGES+LS+VRTSSGMFISKNKD IV+GIEDKISSWTFLPKENG
Sbjct: 366 ISLAKSELKRSAVADNLSGESQLSDVRTSSGMFISKNKDPIVAGIEDKISSWTFLPKENG 545
Query: 125 EDIQVLRYEHGQKYDPHYDYFADKVNIARGGHRVATVLMYLTNVTKGGETVFPNAEESPR 184
EDIQVLRYEHGQKYDPHYDYF DKVNIARGGHR+ATVLMYLT+V KGGETVF +AEE PR
Sbjct: 546 EDIQVLRYEHGQKYDPHYDYFTDKVNIARGGHRIATVLMYLTDVAKGGETVFXSAEEPPR 725
Query: 185 HKLSETDEDLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATK 244
+ +ET DLSEC KKG+AV PRRGDALLF SLH NA PDT SLHAGCPVIEGEKWSATK
Sbjct: 726 RRGAETSSDLSECAKKGIAVKPRRGDALLFFSLHTNATPDTSSLHAGCPVIEGEKWSATK 905
Query: 245 WIHVDSFDKTVGAGGDCTDQHESCERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
WIHVDSFDKTVGAGGDC+D H SCERWA+LGECTKNPEYM+G+S +PGYCRKSCK C
Sbjct: 906 WIHVDSFDKTVGAGGDCSDNHVSCERWASLGECTKNPEYMIGSSDIPGYCRKSCKAC 1076
>BE823168
Length = 654
Score = 251 bits (642), Expect = 2e-67
Identities = 115/144 (79%), Positives = 125/144 (85%)
Frame = -1
Query: 158 VATVLMYLTNVTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDALLFCSL 217
VA LMYLT+V KGGETVF +A SPRHK SET+E+L EC +KG+AV PRRGDALLF SL
Sbjct: 654 VAXXLMYLTDVXKGGETVFXDAXXSPRHKGSETNENLXECAQKGIAVKPRRGDALLFFSL 475
Query: 218 HPNAIPDTLSLHAGCPVIEGEKWSATKWIHVDSFDKTVGAGGDCTDQHESCERWAALGEC 277
+PNAIPDTLSLHAGCPVIEGEKWSATKWIHVDSFDK VG GGDC D+HE+CERWA LGEC
Sbjct: 474 YPNAIPDTLSLHAGCPVIEGEKWSATKWIHVDSFDKVVGDGGDCNDKHENCERWATLGEC 295
Query: 278 TKNPEYMVGTSGLPGYCRKSCKTC 301
T NPEYMVG+ GLPGYC KSCK C
Sbjct: 294 TSNPEYMVGSPGLPGYCMKSCKEC 223
>TC232158
Length = 904
Score = 231 bits (589), Expect = 3e-61
Identities = 110/208 (52%), Positives = 146/208 (69%)
Frame = +2
Query: 44 SWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGMFISKNKD 103
SW+P AF+Y FLT EC++LI+IA +++S VADN SG+S + +VR S+G F+ + +D
Sbjct: 215 SWQPTAFLYHNFLTKEECEYLINIATPHMQKSTVADNQSGQSVVHDVRKSTGAFLDRGQD 394
Query: 104 AIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGHRVATVLM 163
IV IE +I+ TF+P ENGE I V+ YE GQ YDPHYDYF D NI GG R+AT+LM
Sbjct: 395 EIVRNIEKRIADVTFIPIENGEPIYVIHYEVGQYYDPHYDYFIDDFNIENGGQRIATMLM 574
Query: 164 YLTNVTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDALLFCSLHPNAIP 223
YL+NV +GGET+FP A+ + +LS CGK G+++ P+ GDALLF S+ PNA
Sbjct: 575 YLSNVEEGGETMFPRAKAN--FSSVPWWNELSNCGKMGLSIKPKMGDALLFWSMKPNATL 748
Query: 224 DTLSLHAGCPVIEGEKWSATKWIHVDSF 251
D L+LH+ CPVI+G KWS TKW+H F
Sbjct: 749 DALTLHSACPVIKGNKWSCTKWMHPTEF 832
>TC227194 similar to UP|Q8T5S8 (Q8T5S8) Prolyl 4-hydroxylase alpha-related
protein PH4[alpha]PV (CG31015-PA), partial (4%)
Length = 965
Score = 218 bits (556), Expect = 2e-57
Identities = 105/193 (54%), Positives = 141/193 (72%)
Frame = +1
Query: 60 ECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDKISSWTFL 119
EC++LI IAK + +S V D+ +G+SK S VRTSSG F+++ +D IV IE +I+ ++F+
Sbjct: 1 ECEYLIDIAKPSMHKSTVVDSETGKSKDSRVRTSSGTFLARGRDKIVRDIEKRIAHYSFI 180
Query: 120 PKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGHRVATVLMYLTNVTKGGETVFPNA 179
P E+GE +QVL YE GQKY+PHYDYF D N GG R+ATVLMYLT+V +GGETVFP A
Sbjct: 181 PVEHGEGLQVLHYEVGQKYEPHYDYFLDDFNTKNGGQRIATVLMYLTDVEEGGETVFPAA 360
Query: 180 EESPRHKLSETDEDLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGEK 239
+ + +LSECGKKG+++ P+RGDALLF S+ P+A D SLH GCPVI+G K
Sbjct: 361 KGN--FSSVPWWNELSECGKKGLSIKPKRGDALLFWSMKPDATLDPSSLHGGCPVIKGNK 534
Query: 240 WSATKWIHVDSFD 252
WS+TKW+ V ++
Sbjct: 535 WSSTKWMRVSEYN 573
>TC229833
Length = 1265
Score = 213 bits (543), Expect = 7e-56
Identities = 115/273 (42%), Positives = 165/273 (60%), Gaps = 6/273 (2%)
Frame = +3
Query: 35 IDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSE-VRTS 93
I+P++V Q+SW+PR F+YKGFL+D ECD+L+S+A AV + SG LSE V TS
Sbjct: 270 INPSRVVQISWQPRVFLYKGFLSDKECDYLVSLAY------AVKEKSSGNGGLSEGVETS 431
Query: 94 SGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIAR 153
M +D I++ IE+++S W FLPKE + +QV+ Y Q + DYF +K +
Sbjct: 432 LDM-----EDDILARIEERLSVWAFLPKEYSKPLQVMHYGPEQN-GRNLDYFTNKTQLEL 593
Query: 154 GGHRVATVLMYLTN-VTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDAL 212
G +AT+++YL+N VT+GG+ +FP + S C + P +G+A+
Sbjct: 594 SGPLMATIILYLSNDVTQGGQILFPESVPG--------SSSWSSCSNSSNILQPVKGNAI 749
Query: 213 LFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIHVDSFDK-TVGA---GGDCTDQHESC 268
LF SLHP+A PD S HA CPV+EG+ WSA K+ + + V A GG+CTD+ +SC
Sbjct: 750 LFFSLHPSASPDKSSFHARCPVLEGDMWSAIKYFYAKPISRGKVSATLDGGECTDEDDSC 929
Query: 269 ERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
WAA+GEC +NP +M+G+ G CRKSC C
Sbjct: 930 PAWAAVGECQRNPVFMIGSPDYYGTCRKSCNAC 1028
>TC228929
Length = 979
Score = 195 bits (495), Expect = 2e-50
Identities = 90/164 (54%), Positives = 120/164 (72%)
Frame = +3
Query: 88 SEVRTSSGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFAD 147
S VRTSSGMF+ + +D I+ IE +I+ +TF+P+ENGE +Q+L YE GQKY+PHYDYF D
Sbjct: 12 SRVRTSSGMFLKRGRDKIIQNIEKRIADFTFIPEENGEGLQILHYEVGQKYEPHYDYFLD 191
Query: 148 KVNIARGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPR 207
+ N GG R+ATVLMYL++V +GGETVFP A + DLS+C +KG++V P+
Sbjct: 192 EFNTKNGGQRIATVLMYLSDVEEGGETVFPAA--NANFSSVPWWNDLSQCARKGLSVKPK 365
Query: 208 RGDALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIHVDSF 251
GDALLF S+ P+A D SLH GCPVI+G KWS+TKW+H+ +
Sbjct: 366 MGDALLFWSMRPDATLDPSSLHGGCPVIKGNKWSSTKWMHLREY 497
>AW472148
Length = 391
Score = 184 bits (467), Expect = 4e-47
Identities = 92/129 (71%), Positives = 105/129 (81%)
Frame = +2
Query: 41 KQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGMFISK 100
KQVSWKPRAFVY+GFLT+ ECDH +SIAKS+LKRSAVADNLS ESK+SE+ TSS MFI
Sbjct: 2 KQVSWKPRAFVYEGFLTESECDHFMSIAKSDLKRSAVADNLSSESKVSEITTSSCMFIPN 181
Query: 101 NKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGHRVAT 160
N D IV+ IE KISSWTFLP EN EDIQ+L EHG KY PHYDY A+KV+I R HR +
Sbjct: 182 NNDLIVASIEYKISSWTFLPIENEEDIQILICEHGHKYHPHYDYCANKVHITRCTHRSSH 361
Query: 161 VLMYLTNVT 169
+L+ LTNVT
Sbjct: 362 ILISLTNVT 388
>BM521712 similar to GP|21618073|gb| prolyl 4-hydroxylase alpha subunit-like
protein {Arabidopsis thaliana}, partial (30%)
Length = 412
Score = 178 bits (451), Expect = 3e-45
Identities = 93/118 (78%), Positives = 102/118 (85%), Gaps = 2/118 (1%)
Frame = +1
Query: 6 RVWCSIIVPLL-LICKIHFALGSYAGT-SAIIDPTKVKQVSWKPRAFVYKGFLTDLECDH 63
RVWC ++ L L+ + H A SYAG+ SAIIDP+KVKQVSWKPRAFVY FLT+LECDH
Sbjct: 49 RVWCVVMASALALMLQWHEAFSSYAGSASAIIDPSKVKQVSWKPRAFVYDVFLTELECDH 228
Query: 64 LISIAKSELKRSAVADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDKISSWTFLPK 121
LISIAKSELKRSAVADNLSGESKLSEVRTSSGMFI KNKD IV+G+EDKISSWT LPK
Sbjct: 229 LISIAKSELKRSAVADNLSGESKLSEVRTSSGMFIPKNKDPIVAGVEDKISSWTLLPK 402
>TC219496
Length = 910
Score = 173 bits (439), Expect = 7e-44
Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 5/213 (2%)
Frame = +1
Query: 39 KVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGMFI 98
K + ++W PR + FL+ ECD+L ++A L S V D +G+ S+VRTSSGMF+
Sbjct: 133 KPEVLNWSPRIILLHNFLSMEECDYLRALALPRLHISTVVDTKTGKGIKSDVRTSSGMFL 312
Query: 99 S--KNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGH 156
+ + K +V IE +IS ++ +P ENGE +QVLRYE Q Y PH+DYF+D N+ RGG
Sbjct: 313 NSKERKYPMVQAIEKRISVYSQIPIENGELMQVLRYEKNQYYKPHHDYFSDTFNLKRGGQ 492
Query: 157 RVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDEDLSECG---KKGVAVNPRRGDALL 213
R+AT+LMYL++ +GGET FP A CG KG++V P +G+A+L
Sbjct: 493 RIATMLMYLSDNIEGGETYFPLAGSGE-----------CSCGGKLVKGLSVKPIKGNAVL 639
Query: 214 FCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWI 246
F S+ + D S+H GC VI GEKWSATKW+
Sbjct: 640 FWSMGLDGQSDPNSVHGGCEVISGEKWSATKWL 738
>TC222092 similar to UP|Q8VZD7 (Q8VZD7) AT3g28480/MFJ20_16, partial (26%)
Length = 455
Score = 166 bits (420), Expect = 1e-41
Identities = 81/136 (59%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
Frame = +2
Query: 168 VTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLS 227
V KGGET+FPNAE L DE SEC KG AV PR+GDALLF LH +A DT S
Sbjct: 2 VEKGGETIFPNAEAK---LLQPKDESWSECAHKGYAVKPRKGDALLFFILHLDASTDTKS 172
Query: 228 LHAGCPVIEGEKWSATKWIHVDSFDKTVGA--GGDCTDQHESCERWAALGECTKNPEYMV 285
LH CPVIEGEKWSATKWIHV F+K G+C D++E+C RWA +GEC KNP YMV
Sbjct: 173 LHGSCPVIEGEKWSATKWIHVSDFEKPFKQVDNGECVDENENCPRWAKVGECDKNPLYMV 352
Query: 286 GTSGLPGYCRKSCKTC 301
G G+ G C KSC C
Sbjct: 353 GGEGVRGSCMKSCNVC 400
>TC219497
Length = 770
Score = 150 bits (379), Expect = 7e-37
Identities = 83/177 (46%), Positives = 112/177 (62%), Gaps = 5/177 (2%)
Frame = +3
Query: 75 SAVADNLSGESKLSEVRTSSGMFIS--KNKDAIVSGIEDKISSWTFLPKENGEDIQVLRY 132
S V D +G+ S+VRTSSGMF++ + K +V IE +IS ++ +P ENGE +QVLRY
Sbjct: 30 SNVVDTKTGKGIKSDVRTSSGMFLNPQERKYPMVQAIEKRISVYSQIPIENGELMQVLRY 209
Query: 133 EHGQKYDPHYDYFADKVNIARGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDE 192
E Q Y PH+DYF+D N+ RGG R+AT+LMYL++ +GGET FP A
Sbjct: 210 EKNQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNIEGGETYFPLAGSGE--------- 362
Query: 193 DLSECG---KKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWI 246
CG KG++V P +G+A+LF S+ + D S+H GC VI GEKWSATKW+
Sbjct: 363 --CSCGGKLVKGLSVKPIKGNAVLFWSMGLDGQSDPNSVHGGCEVISGEKWSATKWM 527
>BI971299
Length = 669
Score = 147 bits (372), Expect = 4e-36
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Frame = -1
Query: 102 KDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGHRVATV 161
+D I++ IE+++S L E + QV+ Y + + DYF K + G +AT+
Sbjct: 660 EDDILARIEERLSXXXXLXXEYSKPXQVMHYGP-EPNGRNLDYFTXKTQLELSGPLMATI 484
Query: 162 LMYLTNV-TKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDALLFCSLHPN 220
++YL+N T+GG+ +FP E PR S C + P +G+A+LF SLHP+
Sbjct: 483 VLYLSNAATQGGQILFP--ESVPR------SSSWSSCSNSSNILQPVKGNAILFFSLHPS 328
Query: 221 AIPDTLSLHAGCPVIEGEKWSATKWIHVDSFDK----TVGAGGDCTDQHESCERWAALGE 276
A PD S HA CPV+EG WSA K+ + + GG+CTD+ ++C WAA+GE
Sbjct: 327 ASPDKNSFHARCPVLEGNMWSAIKYFYAKPISSGEVSAISDGGECTDEDDNCPAWAAMGE 148
Query: 277 CTKNPEYMVGTSGLPGYCRKSCKTC 301
C +NP +M+G+ G CRKSC C
Sbjct: 147 CQRNPVFMIGSPDYYGTCRKSCNAC 73
>TC222216 similar to UP|Q9LSI6 (Q9LSI6) Prolyl 4-hydroxylase alpha
subunit-like protein, partial (27%)
Length = 573
Score = 126 bits (316), Expect = 1e-29
Identities = 58/91 (63%), Positives = 78/91 (84%)
Frame = +1
Query: 30 GTSAIIDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSE 89
G+S DPT+V Q+SW PRAF+YKGFL++ ECDHLI++AK +L++S VADN SG+S +SE
Sbjct: 301 GSSVKFDPTRVTQLSWSPRAFLYKGFLSEEECDHLITLAKDKLEKSMVADNESGKSIMSE 480
Query: 90 VRTSSGMFISKNKDAIVSGIEDKISSWTFLP 120
VRTSSGMF++K +D IV+GIE +I++WTFLP
Sbjct: 481 VRTSSGMFLNKAQDEIVAGIEARIAAWTFLP 573
>BM093125
Length = 421
Score = 111 bits (278), Expect = 3e-25
Identities = 65/115 (56%), Positives = 77/115 (66%), Gaps = 29/115 (25%)
Frame = +1
Query: 6 RVWCSIIVPLLLICKIHFALGSYAGT-SAIIDPTKVKQVSWKPRAFVYKGFLTDLECDHL 64
RVW ++ LLLI K H GSYAG+ S+I++P+KVKQ+SWKPRAFVY+GFLTDLECDHL
Sbjct: 82 RVW--FLLFLLLISKCHQVWGSYAGSASSIVNPSKVKQISWKPRAFVYEGFLTDLECDHL 255
Query: 65 ISI----------------------------AKSELKRSAVADNLSGESKLSEVR 91
IS+ AKSELKRSAVADNLSGES+LS+VR
Sbjct: 256 ISLVSIQSSLPLCKNYEAVSVKQLNLRLLL*AKSELKRSAVADNLSGESQLSDVR 420
>BE822836
Length = 610
Score = 105 bits (261), Expect = 3e-23
Identities = 58/128 (45%), Positives = 72/128 (55%)
Frame = -2
Query: 119 LPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGHRVATVLMYLTNVTKGGETVFPN 178
+P +G +L+YE QKYD HYD F R+A+ L+YL+NV GGET+FP
Sbjct: 606 IPXTHGXIFNILKYEVXQKYDSHYDAFNPDEYXXVESQRIASFLLYLSNVEAGGETMFPY 427
Query: 179 AEESPRHKLSETDEDLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGE 238
+ D +C G+ V PR+GD LLF SL PN D SLH CPVI+GE
Sbjct: 426 EGGLN----IDRGYDYQKC--IGLKVKPRQGDGLLFYSLLPNGKIDKTSLHGSCPVIKGE 265
Query: 239 KWSATKWI 246
KW ATKWI
Sbjct: 264 KWVATKWI 241
>TC222832 similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, partial (57%)
Length = 619
Score = 103 bits (258), Expect = 7e-23
Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Frame = +1
Query: 43 VSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSG-ESKLSEVRTSSGMFISKN 101
+SW+PRA + F T +C+ +I +AK LK S +A E +RTSSG+F+S +
Sbjct: 169 LSWRPRAVYFPNFATAEQCESIIDVAKDGLKPSTLALRQGETEDNTKGIRTSSGVFVSAS 348
Query: 102 KDAI--VSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGHRVA 159
+D + IE+KI+ T +P+ +GE +LRYE Q+Y+ HYD F + R+A
Sbjct: 349 EDKTRTLDVIEEKIARATMIPRSHGEAFNILRYEVNQRYNSHYDAFNPAEYGPQKSQRMA 528
Query: 160 TVLMYLTNVTKGGETVFP 177
+ L+YLT+V +GGET+FP
Sbjct: 529 SFLLYLTDVEEGGETMFP 582
>TC227193 similar to UP|Q9FKX6 (Q9FKX6) Prolyl 4-hydroxylase, alpha
subunit-like protein, partial (41%)
Length = 557
Score = 90.5 bits (223), Expect = 8e-19
Identities = 43/83 (51%), Positives = 62/83 (73%)
Frame = +1
Query: 40 VKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGMFIS 99
V+ VSW+PRAFVY FLT EC++LI IAK + +S+V D+ +G+SK S VRTSSG F++
Sbjct: 307 VEVVSWEPRAFVYHNFLTKEECEYLIDIAKPNMHKSSVVDSETGKSKDSRVRTSSGTFLA 486
Query: 100 KNKDAIVSGIEDKISSWTFLPKE 122
+ +D IV IE +I+ ++F+P E
Sbjct: 487 RGRDKIVRDIEKRIAHYSFIPVE 555
>TC227195
Length = 594
Score = 81.3 bits (199), Expect = 5e-16
Identities = 35/59 (59%), Positives = 46/59 (77%)
Frame = +2
Query: 193 DLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIHVDSF 251
+LSECGKKG+++ P+RGDALLF S+ P+A D SLH GCPVI+G K S+TKW+ V +
Sbjct: 17 ELSECGKKGLSIKPKRGDALLFWSMKPDATLDPSSLHGGCPVIKGNKGSSTKWMRVSEY 193
>TC223094 weakly similar to UP|Q6ZL00 (Q6ZL00) Prolyl 4-hydroxylase alpha-1
subunit-like protein, partial (11%)
Length = 290
Score = 78.6 bits (192), Expect = 3e-15
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +1
Query: 244 KWIHVDSFDKTVGA--GGDCTDQHESCERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
KWIHV F K + GDC D++E+C RWA +GEC KNP YMVG G+ G C KSC C
Sbjct: 1 KWIHVSDFQKPIKQVDSGDCVDENENCPRWAKVGECEKNPLYMVGGEGVKGSCMKSCNVC 180
>TC222148 weakly similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, partial
(40%)
Length = 619
Score = 60.5 bits (145), Expect = 9e-10
Identities = 37/103 (35%), Positives = 60/103 (57%), Gaps = 4/103 (3%)
Frame = +1
Query: 35 IDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLS--EVRT 92
+D + +SW+PRA + F + C +I +AK +L+ S +A GE+ S + RT
Sbjct: 313 VDSIPSQILSWRPRAVFFPNFTSVEVCQQIIEMAKPKLEPSKLALR-KGETAESTKDTRT 489
Query: 93 SSGMFI--SKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYE 133
SSG FI S++K I+ +E KI+ T +P+ +GE +L+YE
Sbjct: 490 SSGTFISASEDKSGILDLVERKIAKVTMIPRTHGEIFNILKYE 618
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,360,254
Number of Sequences: 63676
Number of extensions: 252255
Number of successful extensions: 1088
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of query: 301
length of database: 12,639,632
effective HSP length: 97
effective length of query: 204
effective length of database: 6,463,060
effective search space: 1318464240
effective search space used: 1318464240
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146553.10