TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146552.5 - phase: 0 /pseudo
         (43 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC207202 similar to UP|AZF1_YEAST (P41696) Asparagine-rich zinc ...    25  6.8
TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase ...    25  8.9
TC220783 similar to UP|Q9ZWM6 (Q9ZWM6) Adenylyl cyclase associat...    25  8.9

>TC207202 similar to UP|AZF1_YEAST (P41696) Asparagine-rich zinc finger
           protein AZF1, partial (3%)
          Length = 591

 Score = 25.4 bits (54), Expect = 6.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 17  DATMPAAASAVASWAALEAVADACS 41
           +A  PAAA+A  +W  L+  + ACS
Sbjct: 271 EARPPAAAAAARNW*MLQTTSVACS 345


>TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase
          (CBL-interacting protein kinase 4), partial (45%)
          Length = 674

 Score = 25.0 bits (53), Expect = 8.9
 Identities = 11/23 (47%), Positives = 15/23 (64%)
 Frame = +3

Query: 10 HRRDHKGDATMPAAASAVASWAA 32
          HRR H G  + P+ +S V+S AA
Sbjct: 57 HRRRHHGPPSWPSTSSRVSSAAA 125


>TC220783 similar to UP|Q9ZWM6 (Q9ZWM6) Adenylyl cyclase associated protein,
           partial (26%)
          Length = 575

 Score = 25.0 bits (53), Expect = 8.9
 Identities = 12/37 (32%), Positives = 20/37 (53%)
 Frame = -2

Query: 7   LPSHRRDHKGDATMPAAASAVASWAALEAVADACSTA 43
           LP++       ATM  +++A  +WA  + VA+  S A
Sbjct: 310 LPTYWSIRSAKATMEGSSAASGAWAPPDCVAEGWSPA 200


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.315    0.116    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,816,708
Number of Sequences: 63676
Number of extensions: 13069
Number of successful extensions: 67
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of query: 43
length of database: 12,639,632
effective HSP length: 19
effective length of query: 24
effective length of database: 11,429,788
effective search space: 274314912
effective search space used: 274314912
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)